Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071605.t1 | XP_003629259.1 | 87.4 | 348 | 40 | 2 | 1 | 345 | 1 | 347 | 3.10E-130 | 474.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071605.t1 | G7LB62 | 87.4 | 348 | 40 | 2 | 1 | 345 | 1 | 347 | 2.2e-130 | 474.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049669 | MS.gene071605 | -0.815328 | 9.78E-52 | -1.69E-46 |
| MS.gene049825 | MS.gene071605 | -0.810037 | 1.41E-50 | -1.69E-46 |
| MS.gene049873 | MS.gene071605 | -0.813036 | 3.14E-51 | -1.69E-46 |
| MS.gene050026 | MS.gene071605 | -0.80103 | 1.09E-48 | -1.69E-46 |
| MS.gene050355 | MS.gene071605 | -0.801809 | 7.56E-49 | -1.69E-46 |
| MS.gene050750 | MS.gene071605 | -0.829209 | 5.85E-55 | -1.69E-46 |
| MS.gene050813 | MS.gene071605 | -0.803542 | 3.32E-49 | -1.69E-46 |
| MS.gene050953 | MS.gene071605 | -0.825131 | 5.54E-54 | -1.69E-46 |
| MS.gene052176 | MS.gene071605 | -0.831898 | 1.29E-55 | -1.69E-46 |
| MS.gene052309 | MS.gene071605 | 0.856194 | 3.79E-62 | -1.69E-46 |
| MS.gene052358 | MS.gene071605 | 0.915464 | 5.71E-85 | -1.69E-46 |
| MS.gene052361 | MS.gene071605 | 0.841232 | 5.38E-58 | -1.69E-46 |
| MS.gene052519 | MS.gene071605 | -0.826703 | 2.35E-54 | -1.69E-46 |
| MS.gene052586 | MS.gene071605 | -0.800539 | 1.37E-48 | -1.69E-46 |
| MS.gene052685 | MS.gene071605 | -0.802825 | 4.67E-49 | -1.69E-46 |
| MS.gene052965 | MS.gene071605 | 0.852137 | 5.62E-61 | -1.69E-46 |
| MS.gene053006 | MS.gene071605 | -0.822136 | 2.78E-53 | -1.69E-46 |
| MS.gene053054 | MS.gene071605 | 0.812275 | 4.60E-51 | -1.69E-46 |
| MS.gene053298 | MS.gene071605 | -0.806751 | 7.06E-50 | -1.69E-46 |
| MS.gene05415 | MS.gene071605 | -0.808775 | 2.62E-50 | -1.69E-46 |
| MS.gene054291 | MS.gene071605 | 0.835024 | 2.13E-56 | -1.69E-46 |
| MS.gene054405 | MS.gene071605 | -0.823793 | 1.14E-53 | -1.69E-46 |
| MS.gene055784 | MS.gene071605 | 0.81394 | 1.98E-51 | -1.69E-46 |
| MS.gene055818 | MS.gene071605 | -0.809748 | 1.62E-50 | -1.69E-46 |
| MS.gene056087 | MS.gene071605 | -0.806502 | 7.98E-50 | -1.69E-46 |
| MS.gene056091 | MS.gene071605 | -0.814345 | 1.62E-51 | -1.69E-46 |
| MS.gene057026 | MS.gene071605 | -0.801876 | 7.32E-49 | -1.69E-46 |
| MS.gene057079 | MS.gene071605 | -0.819971 | 8.77E-53 | -1.69E-46 |
| MS.gene058037 | MS.gene071605 | -0.818527 | 1.87E-52 | -1.69E-46 |
| MS.gene058625 | MS.gene071605 | -0.803088 | 4.12E-49 | -1.69E-46 |
| MS.gene05954 | MS.gene071605 | -0.859375 | 4.32E-63 | -1.69E-46 |
| MS.gene060322 | MS.gene071605 | -0.807318 | 5.36E-50 | -1.69E-46 |
| MS.gene060521 | MS.gene071605 | -0.814253 | 1.69E-51 | -1.69E-46 |
| MS.gene060572 | MS.gene071605 | -0.838195 | 3.32E-57 | -1.69E-46 |
| MS.gene060634 | MS.gene071605 | 0.84434 | 8.03E-59 | -1.69E-46 |
| MS.gene060879 | MS.gene071605 | -0.823075 | 1.68E-53 | -1.69E-46 |
| MS.gene061040 | MS.gene071605 | 0.913687 | 4.61E-84 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071605.t1 | MTR_8g075120 | 93.103 | 348 | 20 | 2 | 1 | 345 | 1 | 347 | 0.0 | 571 |
| MS.gene071605.t1 | MTR_5g022790 | 41.161 | 379 | 161 | 17 | 4 | 345 | 15 | 368 | 1.00e-57 | 198 |
| MS.gene071605.t1 | MTR_5g022790 | 44.628 | 242 | 96 | 11 | 126 | 345 | 8 | 233 | 1.08e-44 | 157 |
| MS.gene071605.t1 | MTR_5g022790 | 44.628 | 242 | 96 | 11 | 126 | 345 | 8 | 233 | 1.26e-43 | 158 |
| MS.gene071605.t1 | MTR_1g025920 | 35.180 | 361 | 171 | 18 | 17 | 345 | 91 | 420 | 4.21e-21 | 94.7 |
| MS.gene071605.t1 | MTR_1g025920 | 35.180 | 361 | 171 | 18 | 17 | 345 | 91 | 420 | 4.37e-21 | 94.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071605.t1 | AT4G35890 | 32.132 | 333 | 165 | 16 | 37 | 345 | 86 | 381 | 7.19e-23 | 99.0 |
| MS.gene071605.t1 | AT4G35890 | 32.132 | 333 | 165 | 16 | 37 | 345 | 86 | 381 | 2.15e-22 | 98.6 |
| MS.gene071605.t1 | AT5G66100 | 30.556 | 324 | 158 | 17 | 49 | 346 | 66 | 348 | 6.81e-12 | 66.2 |
| MS.gene071605.t1 | AT5G66100 | 30.058 | 346 | 166 | 18 | 26 | 345 | 52 | 347 | 5.94e-11 | 63.9 |
Find 136 sgRNAs with CRISPR-Local
Find 154 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCCACCAATCCCACCTTATA+TGG | 0.156299 | 8.1:-31914889 | MS.gene071605:CDS |
| ACCAGATTGACTACTATTTC+AGG | 0.266021 | 8.1:-31914642 | MS.gene071605:CDS |
| TGGCGGCTGGCGGCCTCCAT+TGG | 0.323639 | 8.1:+31915256 | None:intergenic |
| CTCCAATGCTGCTGCTTCTT+CGG | 0.327782 | 8.1:-31915813 | MS.gene071605:CDS |
| GTCTGCTTCCAGAGTTAAAA+TGG | 0.329463 | 8.1:+31915057 | None:intergenic |
| TCCGGTTCCTGGATGAATTT+CGG | 0.329667 | 8.1:+31915117 | None:intergenic |
| GTGGGATTGGTGGCAGTGGC+GGG | 0.338899 | 8.1:+31914898 | None:intergenic |
| CCACCTTATATGGGCTCATA+TGG | 0.349352 | 8.1:-31914879 | MS.gene071605:CDS |
| CAATCATAACTCTGCTCAAA+TGG | 0.349628 | 8.1:-31915186 | MS.gene071605:CDS |
| TGGCGATTTCGCCGGAGCTT+TGG | 0.359704 | 8.1:+31915751 | None:intergenic |
| CTGGCTCCAAGGTGCGGCGG+CGG | 0.361110 | 8.1:+31915988 | None:intergenic |
| GGGATTGGTGGCAGTGGCGG+GGG | 0.362219 | 8.1:+31914900 | None:intergenic |
| TTAACGGTAGAGACAATTAT+AGG | 0.363096 | 8.1:-31914986 | MS.gene071605:CDS |
| GGTGGGATTGGTGGCAGTGG+CGG | 0.370947 | 8.1:+31914897 | None:intergenic |
| CCAAGGTGCGGCGGCGGGAG+AGG | 0.373375 | 8.1:+31915994 | None:intergenic |
| GTTGTAGACCACCGCCATTC+CGG | 0.378736 | 8.1:+31915099 | None:intergenic |
| CGGCGCTGAGGCTGATCATT+GGG | 0.381172 | 8.1:+31915137 | None:intergenic |
| GATTTGTTCCACAGTTTGTA+AGG | 0.390687 | 8.1:-31914956 | MS.gene071605:CDS |
| ACCACCGCCATTCCGGTTCC+TGG | 0.392452 | 8.1:+31915106 | None:intergenic |
| CCTCTCCCGCCGCCGCACCT+TGG | 0.396404 | 8.1:-31915994 | MS.gene071605:CDS |
| CTCTGGAAGCAGACGTGATC+AGG | 0.400093 | 8.1:-31915048 | MS.gene071605:CDS |
| TATCCATATGAGCCCATATA+AGG | 0.400182 | 8.1:+31914876 | None:intergenic |
| ACAAACTGTGGAACAAATCT+TGG | 0.401130 | 8.1:+31914960 | None:intergenic |
| CAACTCATCAGAAAACTTAT+CGG | 0.402114 | 8.1:-31915301 | MS.gene071605:CDS |
| TGGGATTGGTGGCAGTGGCG+GGG | 0.402414 | 8.1:+31914899 | None:intergenic |
| GGTGGTGATGGCGGTGGTGG+TGG | 0.410660 | 8.1:+31915731 | None:intergenic |
| GCCATCACCACCACAGGAAT+TGG | 0.412805 | 8.1:-31915720 | MS.gene071605:CDS |
| GCGGCGGAGGAAGGAGGAGG+AGG | 0.419591 | 8.1:+31915917 | None:intergenic |
| TGATCAGGACCGCGGAAATC+AGG | 0.421066 | 8.1:-31915033 | MS.gene071605:CDS |
| TGTGGTGGTGATGGCGGTGG+TGG | 0.424964 | 8.1:+31915728 | None:intergenic |
| TGCTGCTGCTTCTTCGGTCA+TGG | 0.429405 | 8.1:-31915807 | MS.gene071605:CDS |
| GGCGGGAGAGGAAGCGTTCA+TGG | 0.432822 | 8.1:+31916006 | None:intergenic |
| CTCTCCTCAGAAGCAAGTTA+AGG | 0.433186 | 8.1:-31915357 | MS.gene071605:CDS |
| TGCACAAACGGTACACTTCT+CGG | 0.433948 | 8.1:+31914727 | None:intergenic |
| CGATTTCGCCGGAGCTTTGG+CGG | 0.441633 | 8.1:+31915754 | None:intergenic |
| GGAATTGGTGAAACCTTCCT+TGG | 0.443310 | 8.1:-31915705 | MS.gene071605:CDS |
| ACCTGAAATAGTAGTCAATC+TGG | 0.445908 | 8.1:+31914641 | None:intergenic |
| ATCTGAATCCGCCAAAGCTC+CGG | 0.446417 | 8.1:-31915762 | MS.gene071605:CDS |
| GCGCAGACATTTGTGGCGGC+TGG | 0.450914 | 8.1:+31915243 | None:intergenic |
| GAAGACATCGACAACACTTC+CGG | 0.453122 | 8.1:-31915863 | MS.gene071605:CDS |
| ACAGCGGCGGAGGAAGGAGG+AGG | 0.454286 | 8.1:+31915914 | None:intergenic |
| TCGGCGCTGAGGCTGATCAT+TGG | 0.454767 | 8.1:+31915136 | None:intergenic |
| TTGGAGGGTTTACTCCAAAC+AGG | 0.455281 | 8.1:+31915830 | None:intergenic |
| CAGCGGTGGAGGCAACAATC+TGG | 0.459815 | 8.1:+31915969 | None:intergenic |
| TGGCTCCAAGGTGCGGCGGC+GGG | 0.460627 | 8.1:+31915989 | None:intergenic |
| GCCGAAATTCATCCAGGAAC+CGG | 0.461700 | 8.1:-31915118 | MS.gene071605:CDS |
| GGTTTCGTTGCTGTCCCACC+AGG | 0.463812 | 8.1:-31915215 | MS.gene071605:CDS |
| GACCGAAGAAGCAGCAGCAT+TGG | 0.465776 | 8.1:+31915811 | None:intergenic |
| GAGGAAGCGTTCATGGCCAT+TGG | 0.466060 | 8.1:+31916013 | None:intergenic |
| GAAGATATCGGTTGCACAAA+CGG | 0.466726 | 8.1:+31914715 | None:intergenic |
| CCCATATAAGGTGGGATTGG+TGG | 0.468438 | 8.1:+31914888 | None:intergenic |
| CCTTGAGGCGCAGACATTTG+TGG | 0.469144 | 8.1:+31915236 | None:intergenic |
| TAGTATTGGGCATGATTAGT+AGG | 0.473060 | 8.1:+31914924 | None:intergenic |
| TTGAGCAGAGTTATGATTGT+GGG | 0.478241 | 8.1:+31915190 | None:intergenic |
| ATCGACCTTGCCTCAATCGC+AGG | 0.478474 | 8.1:-31915678 | MS.gene071605:intron |
| ATGGGCTCATATGGATATCA+TGG | 0.478647 | 8.1:-31914870 | MS.gene071605:intron |
| CGAAGAAGCAGCAGCATTGG+AGG | 0.481797 | 8.1:+31915814 | None:intergenic |
| TACGGCGGAAGCAGCGGTGG+AGG | 0.484516 | 8.1:+31915958 | None:intergenic |
| CCACCAATCCCACCTTATAT+GGG | 0.484922 | 8.1:-31914888 | MS.gene071605:CDS |
| TTAGTATGCAACTCAGAATC+CGG | 0.489983 | 8.1:+31914673 | None:intergenic |
| GAGGAAGGAGGAGGAGGTGA+CGG | 0.494008 | 8.1:+31915923 | None:intergenic |
| CTAACGCTTCAAATGATGTA+TGG | 0.503281 | 8.1:-31914772 | MS.gene071605:CDS |
| GAAAGTGTCGACAGCGGCGG+AGG | 0.507299 | 8.1:+31915904 | None:intergenic |
| CGGTCATGGATGCTGACTCA+TGG | 0.507318 | 8.1:-31915793 | MS.gene071605:CDS |
| ACCAATTCCTGTGGTGGTGA+TGG | 0.511057 | 8.1:+31915719 | None:intergenic |
| GAGCCCATATAAGGTGGGAT+TGG | 0.512163 | 8.1:+31914885 | None:intergenic |
| GTGTCGACAGCGGCGGAGGA+AGG | 0.512183 | 8.1:+31915908 | None:intergenic |
| GTCTTCCGCCGCCTCAGTGA+CGG | 0.512716 | 8.1:+31915880 | None:intergenic |
| TCCTGTGGTGGTGATGGCGG+TGG | 0.513238 | 8.1:+31915725 | None:intergenic |
| TTGGGCACAAATCCAGCTCT+TGG | 0.515928 | 8.1:+31915155 | None:intergenic |
| GTATCCTTAACTTGCTTCTG+AGG | 0.520478 | 8.1:+31915353 | None:intergenic |
| ACCACCGCCATCACCACCAC+AGG | 0.524419 | 8.1:-31915726 | MS.gene071605:CDS |
| CATACATCATTTGAAGCGTT+AGG | 0.525907 | 8.1:+31914773 | None:intergenic |
| TCCAGGAACCGGAATGGCGG+TGG | 0.529103 | 8.1:-31915107 | MS.gene071605:CDS |
| CTCAGCGCCGAAATTCATCC+AGG | 0.529121 | 8.1:-31915124 | MS.gene071605:CDS |
| AGGTACGGCGGAAGCAGCGG+TGG | 0.532026 | 8.1:+31915955 | None:intergenic |
| CCACAAATGTCTGCGCCTCA+AGG | 0.534512 | 8.1:-31915236 | MS.gene071605:CDS |
| ATGGAACATCTACCAAGAGC+TGG | 0.535798 | 8.1:-31915167 | MS.gene071605:CDS |
| GCATGATTAGTAGGCGGTGG+AGG | 0.541418 | 8.1:+31914933 | None:intergenic |
| AATTCAAACACGTCTTCCAA+TGG | 0.542364 | 8.1:-31915272 | MS.gene071605:CDS |
| GGTGGTGGTGGCGATTTCGC+CGG | 0.543934 | 8.1:+31915743 | None:intergenic |
| TAAGGTGGGATTGGTGGCAG+TGG | 0.544598 | 8.1:+31914894 | None:intergenic |
| CAGACATTTGTGGCGGCTGG+CGG | 0.546833 | 8.1:+31915246 | None:intergenic |
| TGCAACTCAGAATCCGGAGG+TGG | 0.551141 | 8.1:+31914679 | None:intergenic |
| CTCGGAGGCTCCACATGCAA+AGG | 0.554785 | 8.1:+31914745 | None:intergenic |
| TCGACAGCGGCGGAGGAAGG+AGG | 0.564961 | 8.1:+31915911 | None:intergenic |
| CCATATGAGCCCATATAAGG+TGG | 0.568642 | 8.1:+31914879 | None:intergenic |
| AAGCAAGTTAAGGATACTGC+AGG | 0.569915 | 8.1:-31915347 | MS.gene071605:CDS |
| TTGGCGGATTCAGATAAAGC+AGG | 0.573000 | 8.1:+31915770 | None:intergenic |
| TGGGCATGATTAGTAGGCGG+TGG | 0.573030 | 8.1:+31914930 | None:intergenic |
| GGAGGTGACGGCGATGAATG+AGG | 0.573341 | 8.1:+31915935 | None:intergenic |
| TTTCGCCGTCACTGAGGCGG+CGG | 0.577187 | 8.1:-31915885 | MS.gene071605:CDS |
| AACAATCTGGCTCCAAGGTG+CGG | 0.577674 | 8.1:+31915982 | None:intergenic |
| GAGGCAACAATCTGGCTCCA+AGG | 0.579221 | 8.1:+31915977 | None:intergenic |
| GGTCTACAACCACGCGGAGA+TGG | 0.584916 | 8.1:-31915086 | MS.gene071605:CDS |
| CCGGTGGTAAGAGACCTGTT+TGG | 0.585862 | 8.1:-31915844 | MS.gene071605:CDS |
| GGTTTCACCAATTCCTGTGG+TGG | 0.591849 | 8.1:+31915713 | None:intergenic |
| CACTTTCGCCGTCACTGAGG+CGG | 0.594778 | 8.1:-31915888 | MS.gene071605:CDS |
| CTGGATGAATTTCGGCGCTG+AGG | 0.595383 | 8.1:+31915125 | None:intergenic |
| AGGACCGCGGAAATCAGGAC+TGG | 0.598875 | 8.1:-31915028 | MS.gene071605:CDS |
| ATGAGGTACGGCGGAAGCAG+CGG | 0.604517 | 8.1:+31915952 | None:intergenic |
| GAGTTATGATTGTGGGACCC+TGG | 0.608836 | 8.1:+31915197 | None:intergenic |
| GTATGGTCCACCTTTGCATG+TGG | 0.613005 | 8.1:-31914755 | MS.gene071605:CDS |
| AATTCATCCAGGAACCGGAA+TGG | 0.615009 | 8.1:-31915113 | MS.gene071605:CDS |
| TGACGGCGATGAATGAGGTA+CGG | 0.620582 | 8.1:+31915940 | None:intergenic |
| GAAGAAGCAGCAGCATTGGA+GGG | 0.621002 | 8.1:+31915815 | None:intergenic |
| CCAAACAGGTCTCTTACCAC+CGG | 0.621816 | 8.1:+31915844 | None:intergenic |
| GGAGGCTCCACATGCAAAGG+TGG | 0.622207 | 8.1:+31914748 | None:intergenic |
| CATATGAGCCCATATAAGGT+GGG | 0.622209 | 8.1:+31914880 | None:intergenic |
| TTTGAGCAGAGTTATGATTG+TGG | 0.622984 | 8.1:+31915189 | None:intergenic |
| CATTCCAGTCCTGATTTCCG+CGG | 0.624273 | 8.1:+31915024 | None:intergenic |
| AAATACCTGCGATTGAGGCA+AGG | 0.626925 | 8.1:+31915673 | None:intergenic |
| TCAAACACGTCTTCCAATGG+AGG | 0.628375 | 8.1:-31915269 | MS.gene071605:CDS |
| TATGATTGTGGGACCCTGGT+GGG | 0.628962 | 8.1:+31915201 | None:intergenic |
| AGGCAAGGTCGATAAATCCA+AGG | 0.629817 | 8.1:+31915688 | None:intergenic |
| TGAGGCGCAGACATTTGTGG+CGG | 0.632231 | 8.1:+31915239 | None:intergenic |
| GGCGAAAGTGTCGACAGCGG+CGG | 0.635606 | 8.1:+31915901 | None:intergenic |
| GAAGGTTTCACCAATTCCTG+TGG | 0.639283 | 8.1:+31915710 | None:intergenic |
| AAGGTCGATAAATCCAAGGA+AGG | 0.645541 | 8.1:+31915692 | None:intergenic |
| TCATCCAGGAACCGGAATGG+CGG | 0.654453 | 8.1:-31915110 | MS.gene071605:CDS |
| GTTTCGTTGCTGTCCCACCA+GGG | 0.657439 | 8.1:-31915214 | MS.gene071605:CDS |
| AATCTGGCTCCAAGGTGCGG+CGG | 0.658713 | 8.1:+31915985 | None:intergenic |
| AATTCCTGTGGTGGTGATGG+CGG | 0.664267 | 8.1:+31915722 | None:intergenic |
| GTATGCAACTCAGAATCCGG+AGG | 0.681468 | 8.1:+31914676 | None:intergenic |
| AGCAGACGTGATCAGGACCG+CGG | 0.696086 | 8.1:-31915041 | MS.gene071605:CDS |
| GACATCGACAACACTTCCGG+TGG | 0.701044 | 8.1:-31915860 | MS.gene071605:CDS |
| GACGGCGAAAGTGTCGACAG+CGG | 0.707075 | 8.1:+31915898 | None:intergenic |
| CGACACTTTCGCCGTCACTG+AGG | 0.708576 | 8.1:-31915891 | MS.gene071605:CDS |
| GGTGGAGGCCTTACAAACTG+TGG | 0.712069 | 8.1:+31914948 | None:intergenic |
| CGGCGATGAATGAGGTACGG+CGG | 0.718688 | 8.1:+31915943 | None:intergenic |
| TATTGGGCATGATTAGTAGG+CGG | 0.723347 | 8.1:+31914927 | None:intergenic |
| GGGACAGCAACGAAACCTTG+AGG | 0.727311 | 8.1:+31915221 | None:intergenic |
| TTATGATTGTGGGACCCTGG+TGG | 0.738203 | 8.1:+31915200 | None:intergenic |
| TGGTGAGAACCATCTCCGCG+TGG | 0.763757 | 8.1:+31915077 | None:intergenic |
| ACAAACGGTACACTTCTCGG+AGG | 0.802512 | 8.1:+31914730 | None:intergenic |
| GGCGGTGGTCTACAACCACG+CGG | 0.809396 | 8.1:-31915092 | MS.gene071605:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATATTGCAGAAGATAT+CGG | + | chr8.1:31915949-31915968 | None:intergenic | 20.0% |
| !! | AATAAATAAGCAACTAAAGT+GGG | + | chr8.1:31915008-31915027 | None:intergenic | 20.0% |
| !! | GCATATAACTGAAATATATT+TGG | - | chr8.1:31915118-31915137 | MS.gene071605:CDS | 20.0% |
| !! | TAATAAATAAGCAACTAAAG+TGG | + | chr8.1:31915009-31915028 | None:intergenic | 20.0% |
| !!! | AATATATTTGGAATTGTTAC+TGG | - | chr8.1:31915130-31915149 | MS.gene071605:CDS | 20.0% |
| !!! | GCTCATAATAGAAATTTTAA+CGG | - | chr8.1:31915647-31915666 | MS.gene071605:intron | 20.0% |
| !!! | TTCCTTTATTTATCAAGTTA+GGG | - | chr8.1:31915061-31915080 | MS.gene071605:CDS | 20.0% |
| ! | AACCCTAACTTGATAAATAA+AGG | + | chr8.1:31915066-31915085 | None:intergenic | 25.0% |
| !! | GTTCCTTTATTTATCAAGTT+AGG | - | chr8.1:31915060-31915079 | MS.gene071605:CDS | 25.0% |
| !!! | TGTTTTGAGTGTTGATTTTA+GGG | - | chr8.1:31915251-31915270 | MS.gene071605:CDS | 25.0% |
| !!! | TTCTGTTTTTGTTATGTTTG+TGG | - | chr8.1:31915209-31915228 | MS.gene071605:CDS | 25.0% |
| !!! | TTGTTTTGAGTGTTGATTTT+AGG | - | chr8.1:31915250-31915269 | MS.gene071605:CDS | 25.0% |
| CAACTCATCAGAAAACTTAT+CGG | - | chr8.1:31915348-31915367 | MS.gene071605:CDS | 30.0% | |
| TTAACGGTAGAGACAATTAT+AGG | - | chr8.1:31915663-31915682 | MS.gene071605:intron | 30.0% | |
| AATTCAAACACGTCTTCCAA+TGG | - | chr8.1:31915377-31915396 | MS.gene071605:CDS | 35.0% | |
| ACAAACTGTGGAACAAATCT+TGG | + | chr8.1:31915692-31915711 | None:intergenic | 35.0% | |
| ACCAGATTGACTACTATTTC+AGG | - | chr8.1:31916007-31916026 | MS.gene071605:CDS | 35.0% | |
| ACCTGAAATAGTAGTCAATC+TGG | + | chr8.1:31916011-31916030 | None:intergenic | 35.0% | |
| CAATCATAACTCTGCTCAAA+TGG | - | chr8.1:31915463-31915482 | MS.gene071605:intron | 35.0% | |
| CTAACGCTTCAAATGATGTA+TGG | - | chr8.1:31915877-31915896 | MS.gene071605:CDS | 35.0% | |
| GAAAAAAATACCTGCGATTG+AGG | + | chr8.1:31914984-31915003 | None:intergenic | 35.0% | |
| TATCCATATGAGCCCATATA+AGG | + | chr8.1:31915776-31915795 | None:intergenic | 35.0% | |
| TTAGTATGCAACTCAGAATC+CGG | + | chr8.1:31915979-31915998 | None:intergenic | 35.0% | |
| TTGAGCAGAGTTATGATTGT+GGG | + | chr8.1:31915462-31915481 | None:intergenic | 35.0% | |
| TTTGAGCAGAGTTATGATTG+TGG | + | chr8.1:31915463-31915482 | None:intergenic | 35.0% | |
| ! | CATACATCATTTGAAGCGTT+AGG | + | chr8.1:31915879-31915898 | None:intergenic | 35.0% |
| ! | CGATAAGTTTTCTGATGAGT+TGG | + | chr8.1:31915350-31915369 | None:intergenic | 35.0% |
| ! | GATTTGTTCCACAGTTTGTA+AGG | - | chr8.1:31915693-31915712 | MS.gene071605:CDS | 35.0% |
| ! | TAGTATTGGGCATGATTAGT+AGG | + | chr8.1:31915728-31915747 | None:intergenic | 35.0% |
| !!! | TGCAATATTTTTTCCACCTC+CGG | - | chr8.1:31915957-31915976 | MS.gene071605:CDS | 35.0% |
| AAGCAAGTTAAGGATACTGC+AGG | - | chr8.1:31915302-31915321 | MS.gene071605:CDS | 40.0% | |
| AAGGTCGATAAATCCAAGGA+AGG | + | chr8.1:31914960-31914979 | None:intergenic | 40.0% | |
| ATGGGCTCATATGGATATCA+TGG | - | chr8.1:31915779-31915798 | MS.gene071605:CDS | 40.0% | |
| CATATGAGCCCATATAAGGT+GGG | + | chr8.1:31915772-31915791 | None:intergenic | 40.0% | |
| GTCTGCTTCCAGAGTTAAAA+TGG | + | chr8.1:31915595-31915614 | None:intergenic | 40.0% | |
| TATTGGGCATGATTAGTAGG+CGG | + | chr8.1:31915725-31915744 | None:intergenic | 40.0% | |
| ! | GAAGATATCGGTTGCACAAA+CGG | + | chr8.1:31915937-31915956 | None:intergenic | 40.0% |
| !! | GTATCCTTAACTTGCTTCTG+AGG | + | chr8.1:31915299-31915318 | None:intergenic | 40.0% |
| !!! | GAGTGTTGATTTTAGGGTAC+TGG | - | chr8.1:31915257-31915276 | MS.gene071605:CDS | 40.0% |
| !!! | GGTTCTCACCATTTTAACTC+TGG | - | chr8.1:31915584-31915603 | MS.gene071605:intron | 40.0% |
| AAATACCTGCGATTGAGGCA+AGG | + | chr8.1:31914979-31914998 | None:intergenic | 45.0% | |
| AATTCATCCAGGAACCGGAA+TGG | - | chr8.1:31915536-31915555 | MS.gene071605:intron | 45.0% | |
| AGGCAAGGTCGATAAATCCA+AGG | + | chr8.1:31914964-31914983 | None:intergenic | 45.0% | |
| ATGGAACATCTACCAAGAGC+TGG | - | chr8.1:31915482-31915501 | MS.gene071605:intron | 45.0% | |
| CCACCAATCCCACCTTATAT+GGG | - | chr8.1:31915761-31915780 | MS.gene071605:CDS | 45.0% | |
| CCACCTTATATGGGCTCATA+TGG | - | chr8.1:31915770-31915789 | MS.gene071605:CDS | 45.0% | |
| CCATATGAGCCCATATAAGG+TGG | + | chr8.1:31915773-31915792 | None:intergenic | 45.0% | |
| CTCTCCTCAGAAGCAAGTTA+AGG | - | chr8.1:31915292-31915311 | MS.gene071605:CDS | 45.0% | |
| GAAGACATCGACAACACTTC+CGG | - | chr8.1:31914786-31914805 | MS.gene071605:intron | 45.0% | |
| GAAGGTTTCACCAATTCCTG+TGG | + | chr8.1:31914942-31914961 | None:intergenic | 45.0% | |
| GGAATTGGTGAAACCTTCCT+TGG | - | chr8.1:31914944-31914963 | MS.gene071605:CDS | 45.0% | |
| TCAAACACGTCTTCCAATGG+AGG | - | chr8.1:31915380-31915399 | MS.gene071605:CDS | 45.0% | |
| TCCGGTTCCTGGATGAATTT+CGG | + | chr8.1:31915535-31915554 | None:intergenic | 45.0% | |
| TGCACAAACGGTACACTTCT+CGG | + | chr8.1:31915925-31915944 | None:intergenic | 45.0% | |
| TTGGAGGGTTTACTCCAAAC+AGG | + | chr8.1:31914822-31914841 | None:intergenic | 45.0% | |
| !! | TTGGCGGATTCAGATAAAGC+AGG | + | chr8.1:31914882-31914901 | None:intergenic | 45.0% |
| ACAAACGGTACACTTCTCGG+AGG | + | chr8.1:31915922-31915941 | None:intergenic | 50.0% | |
| ATCTGAATCCGCCAAAGCTC+CGG | - | chr8.1:31914887-31914906 | MS.gene071605:CDS | 50.0% | |
| CATTCCAGTCCTGATTTCCG+CGG | + | chr8.1:31915628-31915647 | None:intergenic | 50.0% | |
| CCAAACAGGTCTCTTACCAC+CGG | + | chr8.1:31914808-31914827 | None:intergenic | 50.0% | |
| CCCATATAAGGTGGGATTGG+TGG | + | chr8.1:31915764-31915783 | None:intergenic | 50.0% | |
| GAGCCCATATAAGGTGGGAT+TGG | + | chr8.1:31915767-31915786 | None:intergenic | 50.0% | |
| GAGTTATGATTGTGGGACCC+TGG | + | chr8.1:31915455-31915474 | None:intergenic | 50.0% | |
| GCCACCAATCCCACCTTATA+TGG | - | chr8.1:31915760-31915779 | MS.gene071605:CDS | 50.0% | |
| GCCGAAATTCATCCAGGAAC+CGG | - | chr8.1:31915531-31915550 | MS.gene071605:intron | 50.0% | |
| GGTTTCACCAATTCCTGTGG+TGG | + | chr8.1:31914939-31914958 | None:intergenic | 50.0% | |
| GTATGCAACTCAGAATCCGG+AGG | + | chr8.1:31915976-31915995 | None:intergenic | 50.0% | |
| GTATGGTCCACCTTTGCATG+TGG | - | chr8.1:31915894-31915913 | MS.gene071605:CDS | 50.0% | |
| TATGATTGTGGGACCCTGGT+GGG | + | chr8.1:31915451-31915470 | None:intergenic | 50.0% | |
| TGACGGCGATGAATGAGGTA+CGG | + | chr8.1:31914712-31914731 | None:intergenic | 50.0% | |
| TTATGATTGTGGGACCCTGG+TGG | + | chr8.1:31915452-31915471 | None:intergenic | 50.0% | |
| TTGGGCACAAATCCAGCTCT+TGG | + | chr8.1:31915497-31915516 | None:intergenic | 50.0% | |
| ! | AACAATCTGGCTCCAAGGTG+CGG | + | chr8.1:31914670-31914689 | None:intergenic | 50.0% |
| ! | ACCAATTCCTGTGGTGGTGA+TGG | + | chr8.1:31914933-31914952 | None:intergenic | 50.0% |
| ! | CTCCAATGCTGCTGCTTCTT+CGG | - | chr8.1:31914836-31914855 | MS.gene071605:intron | 50.0% |
| ! | GAAGAAGCAGCAGCATTGGA+GGG | + | chr8.1:31914837-31914856 | None:intergenic | 50.0% |
| !! | AATTCCTGTGGTGGTGATGG+CGG | + | chr8.1:31914930-31914949 | None:intergenic | 50.0% |
| ATCGACCTTGCCTCAATCGC+AGG | - | chr8.1:31914971-31914990 | MS.gene071605:CDS | 55.0% | |
| CCACAAATGTCTGCGCCTCA+AGG | - | chr8.1:31915413-31915432 | MS.gene071605:intron | 55.0% | |
| CCGGTGGTAAGAGACCTGTT+TGG | - | chr8.1:31914805-31914824 | MS.gene071605:intron | 55.0% | |
| CCTTGAGGCGCAGACATTTG+TGG | + | chr8.1:31915416-31915435 | None:intergenic | 55.0% | |
| CTGGATGAATTTCGGCGCTG+AGG | + | chr8.1:31915527-31915546 | None:intergenic | 55.0% | |
| GACATCGACAACACTTCCGG+TGG | - | chr8.1:31914789-31914808 | MS.gene071605:intron | 55.0% | |
| GACCGAAGAAGCAGCAGCAT+TGG | + | chr8.1:31914841-31914860 | None:intergenic | 55.0% | |
| GCATGATTAGTAGGCGGTGG+AGG | + | chr8.1:31915719-31915738 | None:intergenic | 55.0% | |
| GCCATCACCACCACAGGAAT+TGG | - | chr8.1:31914929-31914948 | MS.gene071605:CDS | 55.0% | |
| GGGACAGCAACGAAACCTTG+AGG | + | chr8.1:31915431-31915450 | None:intergenic | 55.0% | |
| GGTGGAGGCCTTACAAACTG+TGG | + | chr8.1:31915704-31915723 | None:intergenic | 55.0% | |
| GTTGTAGACCACCGCCATTC+CGG | + | chr8.1:31915553-31915572 | None:intergenic | 55.0% | |
| GTTTCGTTGCTGTCCCACCA+GGG | - | chr8.1:31915435-31915454 | MS.gene071605:intron | 55.0% | |
| TCATCCAGGAACCGGAATGG+CGG | - | chr8.1:31915539-31915558 | MS.gene071605:intron | 55.0% | |
| TGAGGCGCAGACATTTGTGG+CGG | + | chr8.1:31915413-31915432 | None:intergenic | 55.0% | |
| TGATCAGGACCGCGGAAATC+AGG | - | chr8.1:31915616-31915635 | MS.gene071605:intron | 55.0% | |
| TGCAACTCAGAATCCGGAGG+TGG | + | chr8.1:31915973-31915992 | None:intergenic | 55.0% | |
| TGGGCATGATTAGTAGGCGG+TGG | + | chr8.1:31915722-31915741 | None:intergenic | 55.0% | |
| ! | CAGTGGCGGGGGATAGTATT+GGG | + | chr8.1:31915741-31915760 | None:intergenic | 55.0% |
| ! | CGAAGAAGCAGCAGCATTGG+AGG | + | chr8.1:31914838-31914857 | None:intergenic | 55.0% |
| ! | CTCAGCGCCGAAATTCATCC+AGG | - | chr8.1:31915525-31915544 | MS.gene071605:intron | 55.0% |
| ! | CTCTGGAAGCAGACGTGATC+AGG | - | chr8.1:31915601-31915620 | MS.gene071605:intron | 55.0% |
| ! | GAGGCAACAATCTGGCTCCA+AGG | + | chr8.1:31914675-31914694 | None:intergenic | 55.0% |
| ! | TAAGGTGGGATTGGTGGCAG+TGG | + | chr8.1:31915758-31915777 | None:intergenic | 55.0% |
| ! | TGCTGCTGCTTCTTCGGTCA+TGG | - | chr8.1:31914842-31914861 | MS.gene071605:intron | 55.0% |
| !! | CGGTCATGGATGCTGACTCA+TGG | - | chr8.1:31914856-31914875 | MS.gene071605:intron | 55.0% |
| AGCAGACGTGATCAGGACCG+CGG | - | chr8.1:31915608-31915627 | MS.gene071605:intron | 60.0% | |
| AGGACCGCGGAAATCAGGAC+TGG | - | chr8.1:31915621-31915640 | MS.gene071605:intron | 60.0% | |
| ATGAGGTACGGCGGAAGCAG+CGG | + | chr8.1:31914700-31914719 | None:intergenic | 60.0% | |
| CACTTTCGCCGTCACTGAGG+CGG | - | chr8.1:31914761-31914780 | MS.gene071605:CDS | 60.0% | |
| CAGACATTTGTGGCGGCTGG+CGG | + | chr8.1:31915406-31915425 | None:intergenic | 60.0% | |
| CAGCGGTGGAGGCAACAATC+TGG | + | chr8.1:31914683-31914702 | None:intergenic | 60.0% | |
| CGACACTTTCGCCGTCACTG+AGG | - | chr8.1:31914758-31914777 | MS.gene071605:CDS | 60.0% | |
| CGGCGATGAATGAGGTACGG+CGG | + | chr8.1:31914709-31914728 | None:intergenic | 60.0% | |
| CTCGGAGGCTCCACATGCAA+AGG | + | chr8.1:31915907-31915926 | None:intergenic | 60.0% | |
| GAGGAAGGAGGAGGAGGTGA+CGG | + | chr8.1:31914729-31914748 | None:intergenic | 60.0% | |
| GGAGGCTCCACATGCAAAGG+TGG | + | chr8.1:31915904-31915923 | None:intergenic | 60.0% | |
| GGTCTACAACCACGCGGAGA+TGG | - | chr8.1:31915563-31915582 | MS.gene071605:intron | 60.0% | |
| GGTTTCGTTGCTGTCCCACC+AGG | - | chr8.1:31915434-31915453 | MS.gene071605:intron | 60.0% | |
| TGGCGATTTCGCCGGAGCTT+TGG | + | chr8.1:31914901-31914920 | None:intergenic | 60.0% | |
| TGGTGAGAACCATCTCCGCG+TGG | + | chr8.1:31915575-31915594 | None:intergenic | 60.0% | |
| ! | AATCTGGCTCCAAGGTGCGG+CGG | + | chr8.1:31914667-31914686 | None:intergenic | 60.0% |
| ! | CGATTTCGCCGGAGCTTTGG+CGG | + | chr8.1:31914898-31914917 | None:intergenic | 60.0% |
| ! | CGGCGCTGAGGCTGATCATT+GGG | + | chr8.1:31915515-31915534 | None:intergenic | 60.0% |
| ! | GCAGTGGCGGGGGATAGTAT+TGG | + | chr8.1:31915742-31915761 | None:intergenic | 60.0% |
| ! | GGAGGTGACGGCGATGAATG+AGG | + | chr8.1:31914717-31914736 | None:intergenic | 60.0% |
| ! | TCGGCGCTGAGGCTGATCAT+TGG | + | chr8.1:31915516-31915535 | None:intergenic | 60.0% |
| !! | GACGGCGAAAGTGTCGACAG+CGG | + | chr8.1:31914754-31914773 | None:intergenic | 60.0% |
| ACCACCGCCATCACCACCAC+AGG | - | chr8.1:31914923-31914942 | MS.gene071605:CDS | 65.0% | |
| ACCACCGCCATTCCGGTTCC+TGG | + | chr8.1:31915546-31915565 | None:intergenic | 65.0% | |
| GCGCAGACATTTGTGGCGGC+TGG | + | chr8.1:31915409-31915428 | None:intergenic | 65.0% | |
| GGCGGTGGTCTACAACCACG+CGG | - | chr8.1:31915557-31915576 | MS.gene071605:intron | 65.0% | |
| GTCTTCCGCCGCCTCAGTGA+CGG | + | chr8.1:31914772-31914791 | None:intergenic | 65.0% | |
| TCCAGGAACCGGAATGGCGG+TGG | - | chr8.1:31915542-31915561 | MS.gene071605:intron | 65.0% | |
| TTTCGCCGTCACTGAGGCGG+CGG | - | chr8.1:31914764-31914783 | MS.gene071605:CDS | 65.0% | |
| ! | GGTGGGATTGGTGGCAGTGG+CGG | + | chr8.1:31915755-31915774 | None:intergenic | 65.0% |
| ! | GTGGGATTGGTGGCAGTGGC+GGG | + | chr8.1:31915754-31915773 | None:intergenic | 65.0% |
| ! | TGGGATTGGTGGCAGTGGCG+GGG | + | chr8.1:31915753-31915772 | None:intergenic | 65.0% |
| !! | GAAAGTGTCGACAGCGGCGG+AGG | + | chr8.1:31914748-31914767 | None:intergenic | 65.0% |
| !! | GGCGAAAGTGTCGACAGCGG+CGG | + | chr8.1:31914751-31914770 | None:intergenic | 65.0% |
| !! | GGCGGGAGAGGAAGCGTTCA+TGG | + | chr8.1:31914646-31914665 | None:intergenic | 65.0% |
| !! | GGTGGTGGTGGCGATTTCGC+CGG | + | chr8.1:31914909-31914928 | None:intergenic | 65.0% |
| !! | TCCTGTGGTGGTGATGGCGG+TGG | + | chr8.1:31914927-31914946 | None:intergenic | 65.0% |
| !! | TGTGGTGGTGATGGCGGTGG+TGG | + | chr8.1:31914924-31914943 | None:intergenic | 65.0% |
| ACAGCGGCGGAGGAAGGAGG+AGG | + | chr8.1:31914738-31914757 | None:intergenic | 70.0% | |
| AGGTACGGCGGAAGCAGCGG+TGG | + | chr8.1:31914697-31914716 | None:intergenic | 70.0% | |
| TACGGCGGAAGCAGCGGTGG+AGG | + | chr8.1:31914694-31914713 | None:intergenic | 70.0% | |
| TCGACAGCGGCGGAGGAAGG+AGG | + | chr8.1:31914741-31914760 | None:intergenic | 70.0% | |
| ! | GGGATTGGTGGCAGTGGCGG+GGG | + | chr8.1:31915752-31915771 | None:intergenic | 70.0% |
| ! | GTGTCGACAGCGGCGGAGGA+AGG | + | chr8.1:31914744-31914763 | None:intergenic | 70.0% |
| !! | GGTGGTGATGGCGGTGGTGG+TGG | + | chr8.1:31914921-31914940 | None:intergenic | 70.0% |
| CTGGCTCCAAGGTGCGGCGG+CGG | + | chr8.1:31914664-31914683 | None:intergenic | 75.0% | |
| GCGGCGGAGGAAGGAGGAGG+AGG | + | chr8.1:31914735-31914754 | None:intergenic | 75.0% | |
| TGGCGGCTGGCGGCCTCCAT+TGG | + | chr8.1:31915396-31915415 | None:intergenic | 75.0% | |
| TGGCTCCAAGGTGCGGCGGC+GGG | + | chr8.1:31914663-31914682 | None:intergenic | 75.0% | |
| ! | CCAAGGTGCGGCGGCGGGAG+AGG | + | chr8.1:31914658-31914677 | None:intergenic | 80.0% |
| ! | CCTCTCCCGCCGCCGCACCT+TGG | - | chr8.1:31914655-31914674 | MS.gene071605:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 31914639 | 31916032 | 31914639 | ID=MS.gene071605 |
| chr8.1 | mRNA | 31914639 | 31916032 | 31914639 | ID=MS.gene071605.t1;Parent=MS.gene071605 |
| chr8.1 | exon | 31915679 | 31916032 | 31915679 | ID=MS.gene071605.t1.exon1;Parent=MS.gene071605.t1 |
| chr8.1 | CDS | 31915679 | 31916032 | 31915679 | ID=cds.MS.gene071605.t1;Parent=MS.gene071605.t1 |
| chr8.1 | exon | 31914871 | 31915399 | 31914871 | ID=MS.gene071605.t1.exon2;Parent=MS.gene071605.t1 |
| chr8.1 | CDS | 31914871 | 31915399 | 31914871 | ID=cds.MS.gene071605.t1;Parent=MS.gene071605.t1 |
| chr8.1 | exon | 31914639 | 31914796 | 31914639 | ID=MS.gene071605.t1.exon3;Parent=MS.gene071605.t1 |
| chr8.1 | CDS | 31914639 | 31914796 | 31914639 | ID=cds.MS.gene071605.t1;Parent=MS.gene071605.t1 |
| Gene Sequence |
| Protein sequence |
