Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072512.t1 | XP_003626240.2 | 97.2 | 319 | 9 | 0 | 1 | 319 | 1 | 319 | 4.50E-184 | 653.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072512.t1 | I6YGS0 | 38.4 | 320 | 177 | 8 | 7 | 316 | 7 | 316 | 1.1e-58 | 228.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072512.t1 | G7KXL9 | 97.2 | 319 | 9 | 0 | 1 | 319 | 1 | 319 | 3.2e-184 | 653.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050920 | MS.gene072512 | 0.860391 | 2.13E-63 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene066360 | MS.gene072512 | PPI |
| MS.gene072512 | MS.gene012063 | PPI |
| MS.gene89620 | MS.gene072512 | PPI |
| MS.gene072512 | MS.gene035369 | PPI |
| MS.gene072512 | MS.gene07001 | PPI |
| MS.gene76453 | MS.gene072512 | PPI |
| MS.gene072512 | MS.gene066361 | PPI |
| MS.gene072512 | MS.gene035371 | PPI |
| MS.gene035373 | MS.gene072512 | PPI |
| MS.gene072512 | MS.gene071502 | PPI |
| MS.gene072512 | MS.gene22955 | PPI |
| MS.gene072512 | MS.gene071500 | PPI |
| MS.gene77823 | MS.gene072512 | PPI |
| MS.gene035367 | MS.gene072512 | PPI |
| MS.gene072512 | MS.gene041604 | PPI |
| MS.gene072512 | MS.gene025707 | PPI |
| MS.gene071504 | MS.gene072512 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072512.t1 | MTR_7g112960 | 97.179 | 319 | 9 | 0 | 1 | 319 | 1 | 319 | 0.0 | 650 |
| MS.gene072512.t1 | MTR_7g112963 | 88.088 | 319 | 38 | 0 | 1 | 319 | 1 | 319 | 0.0 | 595 |
| MS.gene072512.t1 | MTR_7g112970 | 88.088 | 319 | 35 | 1 | 1 | 319 | 1 | 316 | 0.0 | 586 |
| MS.gene072512.t1 | MTR_7g113020 | 78.683 | 319 | 68 | 0 | 1 | 319 | 1 | 319 | 0.0 | 536 |
| MS.gene072512.t1 | MTR_7g113050 | 78.193 | 321 | 66 | 2 | 1 | 319 | 1 | 319 | 0.0 | 528 |
| MS.gene072512.t1 | MTR_7g113030 | 77.116 | 319 | 73 | 0 | 1 | 319 | 1 | 319 | 0.0 | 526 |
| MS.gene072512.t1 | MTR_7g113010 | 86.833 | 281 | 37 | 0 | 1 | 281 | 1 | 281 | 0.0 | 525 |
| MS.gene072512.t1 | MTR_7g112620 | 75.549 | 319 | 78 | 0 | 1 | 319 | 1 | 319 | 0.0 | 519 |
| MS.gene072512.t1 | MTR_7g112615 | 76.176 | 319 | 76 | 0 | 1 | 319 | 1 | 319 | 0.0 | 519 |
| MS.gene072512.t1 | MTR_4g005160 | 68.421 | 323 | 97 | 3 | 1 | 319 | 1 | 322 | 1.82e-165 | 463 |
| MS.gene072512.t1 | MTR_4g120240 | 62.305 | 321 | 117 | 3 | 1 | 319 | 37 | 355 | 1.48e-147 | 419 |
| MS.gene072512.t1 | MTR_7g108825 | 61.801 | 322 | 115 | 3 | 1 | 319 | 1 | 317 | 7.94e-146 | 413 |
| MS.gene072512.t1 | MTR_7g113050 | 77.917 | 240 | 49 | 2 | 1 | 238 | 1 | 238 | 2.12e-139 | 394 |
| MS.gene072512.t1 | MTR_7g112615 | 75.630 | 238 | 58 | 0 | 1 | 238 | 1 | 238 | 5.63e-137 | 388 |
| MS.gene072512.t1 | MTR_8g076680 | 47.368 | 323 | 158 | 5 | 1 | 319 | 3 | 317 | 2.05e-108 | 318 |
| MS.gene072512.t1 | MTR_7g108825 | 60.996 | 241 | 86 | 3 | 1 | 238 | 1 | 236 | 3.88e-104 | 304 |
| MS.gene072512.t1 | MTR_7g112615 | 80.571 | 175 | 31 | 1 | 1 | 172 | 1 | 175 | 1.26e-102 | 298 |
| MS.gene072512.t1 | MTR_1g083480 | 76.730 | 159 | 33 | 2 | 1 | 156 | 1 | 158 | 4.36e-88 | 261 |
| MS.gene072512.t1 | MTR_8g076680 | 47.107 | 242 | 118 | 3 | 1 | 238 | 3 | 238 | 2.76e-83 | 251 |
| MS.gene072512.t1 | MTR_7g112910 | 49.801 | 251 | 67 | 7 | 72 | 319 | 1 | 195 | 1.54e-70 | 218 |
| MS.gene072512.t1 | MTR_2g090240 | 37.188 | 320 | 189 | 6 | 1 | 318 | 1 | 310 | 2.10e-67 | 213 |
| MS.gene072512.t1 | MTR_2g090245 | 36.562 | 320 | 191 | 7 | 1 | 318 | 1 | 310 | 5.89e-66 | 210 |
| MS.gene072512.t1 | MTR_4g089060 | 36.137 | 321 | 190 | 6 | 1 | 318 | 1 | 309 | 9.95e-66 | 209 |
| MS.gene072512.t1 | MTR_4g089040 | 36.250 | 320 | 191 | 6 | 1 | 318 | 1 | 309 | 8.24e-65 | 207 |
| MS.gene072512.t1 | MTR_4g089060 | 33.621 | 348 | 189 | 7 | 1 | 318 | 1 | 336 | 9.87e-61 | 197 |
| MS.gene072512.t1 | MTR_3g024250 | 79.245 | 106 | 22 | 0 | 47 | 152 | 2 | 107 | 2.74e-56 | 179 |
| MS.gene072512.t1 | MTR_4g089060 | 37.768 | 233 | 136 | 3 | 1 | 231 | 1 | 226 | 7.45e-55 | 179 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072512.t1 | AT3G05600 | 63.385 | 325 | 112 | 4 | 1 | 319 | 1 | 324 | 6.02e-158 | 444 |
| MS.gene072512.t1 | AT4G02340 | 59.317 | 322 | 122 | 3 | 1 | 319 | 1 | 316 | 6.80e-146 | 414 |
| MS.gene072512.t1 | AT4G15960 | 54.769 | 325 | 140 | 3 | 1 | 319 | 51 | 374 | 6.94e-131 | 377 |
| MS.gene072512.t1 | AT2G26740 | 58.075 | 322 | 128 | 4 | 4 | 319 | 1 | 321 | 7.37e-126 | 363 |
| MS.gene072512.t1 | AT2G26750 | 55.763 | 321 | 136 | 4 | 4 | 319 | 1 | 320 | 1.25e-120 | 350 |
| MS.gene072512.t1 | AT3G05600 | 65.164 | 244 | 78 | 4 | 1 | 238 | 1 | 243 | 4.87e-119 | 342 |
| MS.gene072512.t1 | AT4G15955 | 50.154 | 325 | 126 | 4 | 5 | 319 | 6 | 304 | 2.22e-111 | 325 |
| MS.gene072512.t1 | AT3G51000 | 49.371 | 318 | 156 | 5 | 4 | 319 | 5 | 319 | 9.57e-108 | 317 |
| MS.gene072512.t1 | AT4G15955 | 61.272 | 173 | 57 | 2 | 5 | 167 | 6 | 178 | 1.58e-74 | 227 |
| MS.gene072512.t1 | AT4G15955 | 60.606 | 165 | 55 | 2 | 5 | 159 | 6 | 170 | 1.84e-69 | 214 |
Find 82 sgRNAs with CRISPR-Local
Find 372 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACATAAGCTTTGATTCTTTC+AGG | 0.126719 | 7.3:+4002050 | None:intergenic |
| ATAACAACTTCCTCCAAATT+TGG | 0.197478 | 7.3:+3996752 | None:intergenic |
| CCATCAACAGGTTTCACTTT+TGG | 0.201205 | 7.3:+4001996 | None:intergenic |
| TGATATCCTCAGCAGCTTCT+TGG | 0.242215 | 7.3:+3996702 | None:intergenic |
| TAAGAAAGATGTGCCAAATT+TGG | 0.247220 | 7.3:-3996765 | MS.gene072512:CDS |
| TCTTCCTCGTTGCTCATGAC+TGG | 0.287745 | 7.3:-4002109 | MS.gene072512:CDS |
| GTACTTGAAGCATGTGGATT+AGG | 0.317120 | 7.3:+3997541 | None:intergenic |
| ATGTTCTTGATCAGCAGTTC+TGG | 0.327516 | 7.3:+3997616 | None:intergenic |
| CACAGAACAGTGGAAGTAAA+TGG | 0.329659 | 7.3:-4002380 | MS.gene072512:CDS |
| TGAGATTTCTATAGTAGTTA+AGG | 0.334286 | 7.3:+3997437 | None:intergenic |
| GTACAAAGGCCCTCCCTTCT+TGG | 0.334892 | 7.3:-3997522 | MS.gene072512:CDS |
| TTCCTGAACTTTGGTACTCT+TGG | 0.363293 | 7.3:-4002295 | MS.gene072512:CDS |
| TTAGGTATCACGCCTTCTTT+TGG | 0.366228 | 7.3:+3997559 | None:intergenic |
| TTACTATATCTGCAGATTCC+AGG | 0.380361 | 7.3:-4001949 | MS.gene072512:intron |
| CGCCAAGAGTACCAAAGTTC+AGG | 0.381681 | 7.3:+4002293 | None:intergenic |
| GATGCAGTTTACACTTCATT+TGG | 0.385195 | 7.3:-3996818 | MS.gene072512:CDS |
| ATGCTTACAAGTAGGAATTC+TGG | 0.400743 | 7.3:-3997595 | MS.gene072512:CDS |
| CATGACTGGGGTGCCATGAT+TGG | 0.400934 | 7.3:-4002095 | MS.gene072512:CDS |
| CGCCACCAGATTGCGGCTCT+CGG | 0.403229 | 7.3:-4002272 | MS.gene072512:CDS |
| TTTGGAGGAAGTTGTTATAC+AGG | 0.404163 | 7.3:-3996747 | MS.gene072512:CDS |
| GAGATTTCTATAGTAGTTAA+GGG | 0.405115 | 7.3:+3997438 | None:intergenic |
| GATGGCATGCGAGCTTTGTT+TGG | 0.411295 | 7.3:-4001978 | MS.gene072512:CDS |
| TCACCGTATCCACGGAGATC+TGG | 0.416951 | 7.3:+4002224 | None:intergenic |
| TGCTTACAAGTAGGAATTCT+GGG | 0.417680 | 7.3:-3997594 | MS.gene072512:CDS |
| CATAAGCTTTGATTCTTTCA+GGG | 0.418162 | 7.3:+4002051 | None:intergenic |
| GCTTCTAAATTTGAAAAGAC+AGG | 0.421347 | 7.3:-3997472 | MS.gene072512:CDS |
| CCTGTTGTCCTGTTCCTTCA+CGG | 0.424309 | 7.3:-4002320 | MS.gene072512:CDS |
| GAGCTCACTGCAGCATGGAC+TGG | 0.424418 | 7.3:-3996884 | MS.gene072512:CDS |
| CCAAAAGTGAAACCTGTTGA+TGG | 0.426814 | 7.3:-4001996 | MS.gene072512:CDS |
| CTTCCTCGTTGCTCATGACT+GGG | 0.434456 | 7.3:-4002108 | MS.gene072512:CDS |
| TTTGGGTTTCTGGGTAAATA+CGG | 0.435366 | 7.3:+4002014 | None:intergenic |
| TAGCTACACAATCTTCCATT+TGG | 0.437058 | 7.3:-4002177 | MS.gene072512:CDS |
| TGTTCTTGATCAGCAGTTCT+GGG | 0.458674 | 7.3:+3997617 | None:intergenic |
| GGGAGCCGAGAGCCGCAATC+TGG | 0.460139 | 7.3:+4002267 | None:intergenic |
| CAGGAAAGCCGTGAAGGAAC+AGG | 0.460850 | 7.3:+4002312 | None:intergenic |
| AAAGCTCGCATGCCATCAAC+AGG | 0.462838 | 7.3:+4001984 | None:intergenic |
| TTCACGGCTTTCCTGAACTT+TGG | 0.464362 | 7.3:-4002304 | MS.gene072512:CDS |
| TTATCATATATACAGAAATT+GGG | 0.470961 | 7.3:-3996906 | MS.gene072512:intron |
| CCGTGAAGGAACAGGACAAC+AGG | 0.481846 | 7.3:+4002320 | None:intergenic |
| AAAATGCATATTGCTGAGAA+AGG | 0.485302 | 7.3:-4002353 | MS.gene072512:CDS |
| GCTCCAGATCTCCGTGGATA+CGG | 0.493914 | 7.3:-4002227 | MS.gene072512:CDS |
| ATTGCGGCTCTCGGCTCCCT+CGG | 0.495545 | 7.3:-4002263 | MS.gene072512:CDS |
| GAAAGATGTGCCAAATTTGG+AGG | 0.498854 | 7.3:-3996762 | MS.gene072512:CDS |
| CAACGATATCACCTACCAAA+TGG | 0.500645 | 7.3:+4002162 | None:intergenic |
| CAATCCATGTGCCAGGAACC+AGG | 0.501841 | 7.3:-3997670 | MS.gene072512:intron |
| TCTTCTTGTGAGAGCCAAGA+AGG | 0.520505 | 7.3:+3997508 | None:intergenic |
| ACAAAGATACCAACCAATCA+TGG | 0.521014 | 7.3:+4002082 | None:intergenic |
| GCCTTTGTACTTGAAGCATG+TGG | 0.538003 | 7.3:+3997535 | None:intergenic |
| AGCCGAGAGCCGCAATCTGG+TGG | 0.547065 | 7.3:+4002270 | None:intergenic |
| ATTGCTGAGAAAGGAAAAGA+AGG | 0.548522 | 7.3:-4002344 | MS.gene072512:CDS |
| CCACCAATCCTACCAAAAGA+AGG | 0.551242 | 7.3:-3997571 | MS.gene072512:CDS |
| GAGGAAGTTGTTATACAGGA+AGG | 0.556694 | 7.3:-3996743 | MS.gene072512:CDS |
| ATGGAAGCTGAATTTGCTAA+AGG | 0.559276 | 7.3:-3997643 | MS.gene072512:CDS |
| TTGTGAGAGCCAAGAAGGGA+GGG | 0.564283 | 7.3:+3997513 | None:intergenic |
| ACTGGGGTGCCATGATTGGT+TGG | 0.574896 | 7.3:-4002091 | MS.gene072512:CDS |
| TCAAGAACATGCTTACAAGT+AGG | 0.581750 | 7.3:-3997603 | MS.gene072512:CDS |
| CTCTTGGCGCCACCAGATTG+CGG | 0.594106 | 7.3:-4002279 | MS.gene072512:CDS |
| ATTGGGAGCTCACTGCAGCA+TGG | 0.599865 | 7.3:-3996889 | MS.gene072512:CDS |
| ACTAACTGAAGTCGGAGCAT+CGG | 0.602755 | 7.3:+4002199 | None:intergenic |
| CAACAACCAAGAAGCTGCTG+AGG | 0.614308 | 7.3:-3996708 | MS.gene072512:CDS |
| CATCGGTGTCACCGTATCCA+CGG | 0.616606 | 7.3:+4002216 | None:intergenic |
| ACAAAGCAATACATCGAGAG+TGG | 0.620658 | 7.3:-3996794 | MS.gene072512:CDS |
| AAAGTTCAGGAAAGCCGTGA+AGG | 0.621297 | 7.3:+4002306 | None:intergenic |
| TTTGAAAAGACAGGATTCAG+TGG | 0.621795 | 7.3:-3997463 | MS.gene072512:CDS |
| CTTGTGAGAGCCAAGAAGGG+AGG | 0.625664 | 7.3:+3997512 | None:intergenic |
| AGCAACAGCACGGTAACCGA+GGG | 0.627749 | 7.3:+4002247 | None:intergenic |
| AGGAGTAGAGCACAGAACAG+TGG | 0.630212 | 7.3:-4002390 | MS.gene072512:CDS |
| GAGCAACAGCACGGTAACCG+AGG | 0.630872 | 7.3:+4002246 | None:intergenic |
| CTTCTTGTGAGAGCCAAGAA+GGG | 0.631265 | 7.3:+3997509 | None:intergenic |
| GTGCCAGTGACATTCATCAC+AGG | 0.631366 | 7.3:-3996848 | MS.gene072512:CDS |
| TCCACATGCTTCAAGTACAA+AGG | 0.634635 | 7.3:-3997536 | MS.gene072512:CDS |
| GTGTAGCTACTAACTGAAGT+CGG | 0.636114 | 7.3:+4002191 | None:intergenic |
| AGTTGTTATACAGGAAGGTG+TGG | 0.637871 | 7.3:-3996738 | MS.gene072512:CDS |
| TACACAATCTTCCATTTGGT+AGG | 0.644672 | 7.3:-4002173 | MS.gene072512:CDS |
| TTCCTCGTTGCTCATGACTG+GGG | 0.644782 | 7.3:-4002107 | MS.gene072512:CDS |
| GAAGCTGAATTTGCTAAAGG+TGG | 0.645560 | 7.3:-3997640 | MS.gene072512:CDS |
| TCACCTGTGATGAATGTCAC+TGG | 0.650266 | 7.3:+3996845 | None:intergenic |
| GTTGCTCTCATCGACTCACT+CGG | 0.658224 | 7.3:-4002143 | MS.gene072512:CDS |
| AAGCAATACATCGAGAGTGG+AGG | 0.668681 | 7.3:-3996791 | MS.gene072512:CDS |
| GGAGATCTGGAGCAACAGCA+CGG | 0.677123 | 7.3:+4002237 | None:intergenic |
| GCTGTTGCTCCAGATCTCCG+TGG | 0.694215 | 7.3:-4002233 | MS.gene072512:CDS |
| CACCCCAGTCATGAGCAACG+AGG | 0.746246 | 7.3:+4002105 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GATTATTAATAAAAAGAAAT+TGG | - | chr7.3:4001125-4001144 | MS.gene072512:intron | 10.0% |
| !!! | AATTATTAATTGATGTTTTA+TGG | + | chr7.3:4000574-4000593 | None:intergenic | 10.0% |
| !!! | ATTATTAATTGATGTTTTAT+GGG | + | chr7.3:4000573-4000592 | None:intergenic | 10.0% |
| !! | AAAAAAAAAAAACCAAAAAG+AGG | + | chr7.3:3997352-3997371 | None:intergenic | 15.0% |
| !! | AACAATATAATGGTTATAAT+TGG | - | chr7.3:3997456-3997475 | MS.gene072512:CDS | 15.0% |
| !! | ATCATCTATTTCAAATAAAT+GGG | + | chr7.3:3999953-3999972 | None:intergenic | 15.0% |
| !! | TATCATCTATTTCAAATAAA+TGG | + | chr7.3:3999954-3999973 | None:intergenic | 15.0% |
| !! | TTATCATATATACAGAAATT+GGG | - | chr7.3:4002156-4002175 | MS.gene072512:CDS | 15.0% |
| !! | TTGAAGTTTATATAATTGTT+GGG | + | chr7.3:3999174-3999193 | None:intergenic | 15.0% |
| !! | TTTATCATATATACAGAAAT+TGG | - | chr7.3:4002155-4002174 | MS.gene072512:CDS | 15.0% |
| !!! | AAAATGTTAGATTTTTAACT+TGG | - | chr7.3:4000882-4000901 | MS.gene072512:intron | 15.0% |
| !!! | AAATTCCACAAATTTTTTAA+AGG | + | chr7.3:4001104-4001123 | None:intergenic | 15.0% |
| !!! | AGAATTTTTGAATATTTGTA+GGG | + | chr7.3:4000032-4000051 | None:intergenic | 15.0% |
| !!! | AGATAGATCAAAAATTTTAA+TGG | + | chr7.3:3999629-3999648 | None:intergenic | 15.0% |
| !!! | AGTATATTGTTTGATTTTAA+TGG | - | chr7.3:3997498-3997517 | MS.gene072512:CDS | 15.0% |
| !!! | ATTTATTTGAAATAGATGAT+AGG | - | chr7.3:3999953-3999972 | MS.gene072512:intron | 15.0% |
| !!! | GTATATTGTTTGATTTTAAT+GGG | - | chr7.3:3997499-3997518 | MS.gene072512:CDS | 15.0% |
| !!! | TAGAATTTTTGAATATTTGT+AGG | + | chr7.3:4000033-4000052 | None:intergenic | 15.0% |
| !!! | TATATTGTTTGATTTTAATG+GGG | - | chr7.3:3997500-3997519 | MS.gene072512:CDS | 15.0% |
| !! | AAATGTGATATCAAAATTCA+AGG | + | chr7.3:4001993-4002012 | None:intergenic | 20.0% |
| !! | AGTAGTACAAAAATGAATTT+AGG | + | chr7.3:3998419-3998438 | None:intergenic | 20.0% |
| !! | ATGAATGTTTCGAAAAAATT+TGG | + | chr7.3:4000193-4000212 | None:intergenic | 20.0% |
| !! | CAACAATTATATAAACTTCA+AGG | - | chr7.3:3999173-3999192 | MS.gene072512:intron | 20.0% |
| !! | CAATAAAAGAAATTCAAAAG+AGG | - | chr7.3:3998338-3998357 | MS.gene072512:intron | 20.0% |
| !! | CATTCAATCAAACAATATAA+TGG | - | chr7.3:3997446-3997465 | MS.gene072512:CDS | 20.0% |
| !! | CTTGAAGTTTATATAATTGT+TGG | + | chr7.3:3999175-3999194 | None:intergenic | 20.0% |
| !! | GTGAAAAATTAATGTGTAAA+AGG | + | chr7.3:4000078-4000097 | None:intergenic | 20.0% |
| !! | TAAAAGGTTAAATCGAAAAA+GGG | + | chr7.3:4000062-4000081 | None:intergenic | 20.0% |
| !! | TCATCTATTTCAAATAAATG+GGG | + | chr7.3:3999952-3999971 | None:intergenic | 20.0% |
| !! | TCTATTAACAAATACACATT+GGG | + | chr7.3:4002120-4002139 | None:intergenic | 20.0% |
| !! | TGAATGTTTCGAAAAAATTT+GGG | + | chr7.3:4000192-4000211 | None:intergenic | 20.0% |
| !! | TTCTATTAACAAATACACAT+TGG | + | chr7.3:4002121-4002140 | None:intergenic | 20.0% |
| !!! | AAAAAAATTTCATGCCTTTT+CGG | - | chr7.3:4000459-4000478 | MS.gene072512:intron | 20.0% |
| !!! | ATATCTTTCCAGTATATTTT+CGG | + | chr7.3:4000282-4000301 | None:intergenic | 20.0% |
| !!! | ATTTCAAATGTTTTTTTGAG+TGG | + | chr7.3:3999535-3999554 | None:intergenic | 20.0% |
| !!! | GAATTTTTGAATATTTGTAG+GGG | + | chr7.3:4000031-4000050 | None:intergenic | 20.0% |
| ! | AAAAATTTGGGAAACGTTTA+TGG | + | chr7.3:4000180-4000199 | None:intergenic | 25.0% |
| ! | AAAGTTATGACATCTCAATT+AGG | + | chr7.3:3998304-3998323 | None:intergenic | 25.0% |
| ! | AAATGGTTCAATTGGTTAAA+AGG | + | chr7.3:3999655-3999674 | None:intergenic | 25.0% |
| ! | AAGCAATAATTACAAGTAGT+TGG | + | chr7.3:3999758-3999777 | None:intergenic | 25.0% |
| ! | AATTTAGTTAGTCAAGAAGA+GGG | + | chr7.3:4001765-4001784 | None:intergenic | 25.0% |
| ! | AGAACAAAAAATGGTTCAAT+TGG | + | chr7.3:3999663-3999682 | None:intergenic | 25.0% |
| ! | AGCAATAATTACAAGTAGTT+GGG | + | chr7.3:3999757-3999776 | None:intergenic | 25.0% |
| ! | AGTACAAAAATGAATTTAGG+TGG | + | chr7.3:3998416-3998435 | None:intergenic | 25.0% |
| ! | ATCAGTGTTACATTTAATTC+AGG | - | chr7.3:3999403-3999422 | MS.gene072512:intron | 25.0% |
| ! | ATGTGAATTAATGCTGAATT+GGG | + | chr7.3:4000118-4000137 | None:intergenic | 25.0% |
| ! | CATTAAAAAAAACTTCACCA+AGG | + | chr7.3:3998157-3998176 | None:intergenic | 25.0% |
| ! | CTTTCCGAAAATATACAATA+AGG | - | chr7.3:4000254-4000273 | MS.gene072512:intron | 25.0% |
| ! | GAAAGAAAAATGAAATCAGA+AGG | - | chr7.3:4000674-4000693 | MS.gene072512:intron | 25.0% |
| ! | GAGATTTCTATAGTAGTTAA+GGG | + | chr7.3:4001627-4001646 | None:intergenic | 25.0% |
| ! | GTAAAAGGTTAAATCGAAAA+AGG | + | chr7.3:4000063-4000082 | None:intergenic | 25.0% |
| ! | GTGATAGAAATACCAATATT+AGG | + | chr7.3:3997977-3997996 | None:intergenic | 25.0% |
| ! | TACAGTTTAGACACTAATTA+GGG | - | chr7.3:3997375-3997394 | MS.gene072512:intron | 25.0% |
| ! | TATCATGTCAGATTCTATTA+AGG | - | chr7.3:3998015-3998034 | MS.gene072512:intron | 25.0% |
| ! | TCAGTGTTACATTTAATTCA+GGG | - | chr7.3:3999404-3999423 | MS.gene072512:intron | 25.0% |
| ! | TCCTAAATCTTTATTGTTAC+CGG | + | chr7.3:4000642-4000661 | None:intergenic | 25.0% |
| ! | TGAGATTTCTATAGTAGTTA+AGG | + | chr7.3:4001628-4001647 | None:intergenic | 25.0% |
| ! | TGTTGAAATGGAGATAAAAT+TGG | + | chr7.3:3998373-3998392 | None:intergenic | 25.0% |
| ! | TTACAGTTTAGACACTAATT+AGG | - | chr7.3:3997374-3997393 | MS.gene072512:intron | 25.0% |
| !! | AAACTAGAGAAATAGGATTT+TGG | + | chr7.3:3999784-3999803 | None:intergenic | 25.0% |
| !! | AAATTTCCCAAGTTTTTATC+CGG | + | chr7.3:3999979-3999998 | None:intergenic | 25.0% |
| !! | AAGCATTTGCAAATTTTACA+AGG | + | chr7.3:4000934-4000953 | None:intergenic | 25.0% |
| !! | AATTTTATCTCCATTTCAAC+AGG | - | chr7.3:3998372-3998391 | MS.gene072512:intron | 25.0% |
| !! | ATTTTATCTCCATTTCAACA+GGG | - | chr7.3:3998373-3998392 | MS.gene072512:intron | 25.0% |
| !! | CTTATTGTATATTTTCGGAA+AGG | + | chr7.3:4000256-4000275 | None:intergenic | 25.0% |
| !! | GATTACGAAACTAATTTTCT+TGG | + | chr7.3:3999332-3999351 | None:intergenic | 25.0% |
| !! | GCAGTTTTCTTTTATACAAA+GGG | - | chr7.3:4000747-4000766 | MS.gene072512:intron | 25.0% |
| !! | GGAACCTTATTGTATATTTT+CGG | + | chr7.3:4000261-4000280 | None:intergenic | 25.0% |
| !! | GTTTTTCATCGTAATAGATT+AGG | - | chr7.3:3998040-3998059 | MS.gene072512:intron | 25.0% |
| !! | TATTCTCTGAATCAAGTTTT+TGG | + | chr7.3:4000839-4000858 | None:intergenic | 25.0% |
| !! | TGCAGTTTTCTTTTATACAA+AGG | - | chr7.3:4000746-4000765 | MS.gene072512:intron | 25.0% |
| !! | TGTGTCCTTTAAAAAATTTG+TGG | - | chr7.3:4001096-4001115 | MS.gene072512:intron | 25.0% |
| !!! | AATTCACATGATATTTTTGC+AGG | - | chr7.3:4000129-4000148 | MS.gene072512:intron | 25.0% |
| !!! | ACAATTTAAGTTAGGGTTTT+AGG | + | chr7.3:4001875-4001894 | None:intergenic | 25.0% |
| !!! | GGTTGTTTTGCTTATAATAT+TGG | + | chr7.3:3999311-3999330 | None:intergenic | 25.0% |
| !!! | GTCATTTTTCCAAATTAACT+AGG | - | chr7.3:4001661-4001680 | MS.gene072512:intron | 25.0% |
| !!! | GTGTTTTTAACACTTGTTTT+AGG | - | chr7.3:3998184-3998203 | MS.gene072512:intron | 25.0% |
| !!! | TACACTTTTTTTTCCCATAT+GGG | - | chr7.3:3998113-3998132 | MS.gene072512:intron | 25.0% |
| !!! | TGGTGAAGTTTTTTTTAATG+AGG | - | chr7.3:3998157-3998176 | MS.gene072512:intron | 25.0% |
| !!! | TTACACTTTTTTTTCCCATA+TGG | - | chr7.3:3998112-3998131 | MS.gene072512:intron | 25.0% |
| !!! | TTGTGTTTGTTTTCCAAAAA+TGG | - | chr7.3:3999815-3999834 | MS.gene072512:intron | 25.0% |
| AAAAAACCAAAAAGAGGAAG+AGG | + | chr7.3:3997346-3997365 | None:intergenic | 30.0% | |
| AAAAACCAAAAAGAGGAAGA+GGG | + | chr7.3:3997345-3997364 | None:intergenic | 30.0% | |
| AAAATGCATATTGCTGAGAA+AGG | - | chr7.3:3996709-3996728 | MS.gene072512:CDS | 30.0% | |
| AAGTCAAAAGAGCAGTTAAA+AGG | + | chr7.3:3997319-3997338 | None:intergenic | 30.0% | |
| AATAATGCAAGCAGAAATAG+TGG | + | chr7.3:3997196-3997215 | None:intergenic | 30.0% | |
| ACATTTCGTGTCAAATATTG+GGG | - | chr7.3:4000778-4000797 | MS.gene072512:intron | 30.0% | |
| AGAATATAAGAAAACGAACC+TGG | + | chr7.3:3997134-3997153 | None:intergenic | 30.0% | |
| AGAGAATATCCAATTTGGTA+TGG | - | chr7.3:4000851-4000870 | MS.gene072512:intron | 30.0% | |
| AGTAACTTAGACAGATTCAA+AGG | + | chr7.3:3997224-3997243 | None:intergenic | 30.0% | |
| ATAACAACTTCCTCCAAATT+TGG | + | chr7.3:4002313-4002332 | None:intergenic | 30.0% | |
| ATAAGGTTCCGAAAATATAC+TGG | - | chr7.3:4000271-4000290 | MS.gene072512:intron | 30.0% | |
| ATGCATAAGAGATTCAAACT+TGG | - | chr7.3:3999024-3999043 | MS.gene072512:intron | 30.0% | |
| ATTAGGATTTACTCGGAAAT+AGG | - | chr7.3:3999695-3999714 | MS.gene072512:intron | 30.0% | |
| ATTGGGAAATATTGAAGGTA+AGG | + | chr7.3:4000101-4000120 | None:intergenic | 30.0% | |
| CAAATAGAAATACAAGTGCA+GGG | + | chr7.3:4001914-4001933 | None:intergenic | 30.0% | |
| CAATTTAGTTAGTCAAGAAG+AGG | + | chr7.3:4001766-4001785 | None:intergenic | 30.0% | |
| CAGAGAACAAATATAATCAC+CGG | - | chr7.3:4000594-4000613 | MS.gene072512:intron | 30.0% | |
| CATGTGAATTAATGCTGAAT+TGG | + | chr7.3:4000119-4000138 | None:intergenic | 30.0% | |
| CATTTAATTCAGGGATAAGT+CGG | - | chr7.3:3999413-3999432 | MS.gene072512:intron | 30.0% | |
| CGTCTTAATCTCTTTACTTT+GGG | - | chr7.3:3997906-3997925 | MS.gene072512:intron | 30.0% | |
| CTCTTCTTGACTAACTAAAT+TGG | - | chr7.3:4001764-4001783 | MS.gene072512:intron | 30.0% | |
| CTTAGGAATTAGGATTTACT+CGG | - | chr7.3:3999688-3999707 | MS.gene072512:intron | 30.0% | |
| GAAATACCAATATTAGGAGT+AGG | + | chr7.3:3997971-3997990 | None:intergenic | 30.0% | |
| GACATTTCGTGTCAAATATT+GGG | - | chr7.3:4000777-4000796 | MS.gene072512:intron | 30.0% | |
| GAGAATATCCAATTTGGTAT+GGG | - | chr7.3:4000852-4000871 | MS.gene072512:intron | 30.0% | |
| GATTCAGAGAATATCCAATT+TGG | - | chr7.3:4000846-4000865 | MS.gene072512:intron | 30.0% | |
| GCTTCTAAATTTGAAAAGAC+AGG | - | chr7.3:4001590-4001609 | MS.gene072512:intron | 30.0% | |
| GTAACTTAGACAGATTCAAA+GGG | + | chr7.3:3997223-3997242 | None:intergenic | 30.0% | |
| TAACTTAGACAGATTCAAAG+GGG | + | chr7.3:3997222-3997241 | None:intergenic | 30.0% | |
| TAAGAAAGATGTGCCAAATT+TGG | - | chr7.3:4002297-4002316 | MS.gene072512:CDS | 30.0% | |
| TAAGTGTGCAGAACAAAAAA+TGG | + | chr7.3:3999672-3999691 | None:intergenic | 30.0% | |
| TAATTGTTGGGAAAACTGTT+TGG | + | chr7.3:3999162-3999181 | None:intergenic | 30.0% | |
| TCCGGTAACAATAAAGATTT+AGG | - | chr7.3:4000638-4000657 | MS.gene072512:intron | 30.0% | |
| TCGTCTTAATCTCTTTACTT+TGG | - | chr7.3:3997905-3997924 | MS.gene072512:intron | 30.0% | |
| TGAAATCATGAATCCAAAAC+TGG | - | chr7.3:4000511-4000530 | MS.gene072512:intron | 30.0% | |
| TGACATTTCGTGTCAAATAT+TGG | - | chr7.3:4000776-4000795 | MS.gene072512:intron | 30.0% | |
| TGATTAAACCCATACCAAAT+TGG | + | chr7.3:4000863-4000882 | None:intergenic | 30.0% | |
| TGCATAAGAGATTCAAACTT+GGG | - | chr7.3:3999025-3999044 | MS.gene072512:intron | 30.0% | |
| TGCTTAGAAATATGACTTCA+AGG | + | chr7.3:3999136-3999155 | None:intergenic | 30.0% | |
| TTATGACATCTCAATTAGGT+TGG | + | chr7.3:3998300-3998319 | None:intergenic | 30.0% | |
| TTGGGAAATATTGAAGGTAA+GGG | + | chr7.3:4000100-4000119 | None:intergenic | 30.0% | |
| TTTAGACACTAATTAGGGAA+CGG | - | chr7.3:3997380-3997399 | MS.gene072512:intron | 30.0% | |
| ! | AAAAAGTACAACTTGAGATC+AGG | + | chr7.3:3998216-3998235 | None:intergenic | 30.0% |
| ! | AAAGATTTAGGAGTTGATCT+AGG | - | chr7.3:4000650-4000669 | MS.gene072512:intron | 30.0% |
| ! | AATGAAATCAGAAGGTTTTC+CGG | - | chr7.3:4000682-4000701 | MS.gene072512:intron | 30.0% |
| ! | ACATAAGCTTTGATTCTTTC+AGG | + | chr7.3:3997015-3997034 | None:intergenic | 30.0% |
| ! | ACTCTTTTGTGATGACAATA+TGG | + | chr7.3:4000396-4000415 | None:intergenic | 30.0% |
| ! | ACTTTGAGAAAGTTGTTGAT+TGG | - | chr7.3:4001052-4001071 | MS.gene072512:intron | 30.0% |
| ! | AGGGCAAAACAATTTAAGTT+AGG | + | chr7.3:4001883-4001902 | None:intergenic | 30.0% |
| ! | AGTATATCTCGTTTTCCTTA+CGG | - | chr7.3:3999920-3999939 | MS.gene072512:intron | 30.0% |
| ! | ATTTCTCTAGTTTCAAAACG+TGG | - | chr7.3:3999791-3999810 | MS.gene072512:intron | 30.0% |
| ! | ATTTGAAATAGATGATAGGC+CGG | - | chr7.3:3999957-3999976 | MS.gene072512:intron | 30.0% |
| ! | CATAAGCTTTGATTCTTTCA+GGG | + | chr7.3:3997014-3997033 | None:intergenic | 30.0% |
| ! | CTCTTTTGTGATGACAATAT+GGG | + | chr7.3:4000395-4000414 | None:intergenic | 30.0% |
| ! | GGGCAAAACAATTTAAGTTA+GGG | + | chr7.3:4001882-4001901 | None:intergenic | 30.0% |
| ! | TCTTTTGTGATGACAATATG+GGG | + | chr7.3:4000394-4000413 | None:intergenic | 30.0% |
| ! | TTTTAACAGTGAACACGTTA+GGG | - | chr7.3:3999482-3999501 | MS.gene072512:intron | 30.0% |
| !! | AACTTAAATTGTTTTGCCCT+TGG | - | chr7.3:4001883-4001902 | MS.gene072512:intron | 30.0% |
| !! | ACTTAAATTGTTTTGCCCTT+GGG | - | chr7.3:4001884-4001903 | MS.gene072512:intron | 30.0% |
| !! | ATTTTAACAGTGAACACGTT+AGG | - | chr7.3:3999481-3999500 | MS.gene072512:intron | 30.0% |
| !!! | ACATGATTTTGATTTGTACG+TGG | - | chr7.3:3997252-3997271 | MS.gene072512:intron | 30.0% |
| !!! | ATTTTTTGTTCTGCACACTT+AGG | - | chr7.3:3999671-3999690 | MS.gene072512:intron | 30.0% |
| !!! | CGTTTTGAAACTAGAGAAAT+AGG | + | chr7.3:3999791-3999810 | None:intergenic | 30.0% |
| AACATTCATGTTTACGTGTC+CGG | - | chr7.3:4000204-4000223 | MS.gene072512:intron | 35.0% | |
| ACAAAAAAGCCCTGTTGAAA+TGG | + | chr7.3:3998385-3998404 | None:intergenic | 35.0% | |
| ACAAAGATACCAACCAATCA+TGG | + | chr7.3:3996983-3997002 | None:intergenic | 35.0% | |
| AGAAAGGTTGGAGTTATCTT+TGG | + | chr7.3:3999226-3999245 | None:intergenic | 35.0% | |
| AGGAAGTTTGAAGACACATA+AGG | - | chr7.3:3997929-3997948 | MS.gene072512:intron | 35.0% | |
| AGTCTTAGTAATCCAGAGTT+CGG | - | chr7.3:4001177-4001196 | MS.gene072512:intron | 35.0% | |
| ATACTTTCATTACACATGGC+TGG | + | chr7.3:4000332-4000351 | None:intergenic | 35.0% | |
| ATCTAAGTGATTGAGCTCAA+TGG | + | chr7.3:4001296-4001315 | None:intergenic | 35.0% | |
| ATGCTTACAAGTAGGAATTC+TGG | - | chr7.3:4001467-4001486 | MS.gene072512:intron | 35.0% | |
| ATTGCTGAGAAAGGAAAAGA+AGG | - | chr7.3:3996718-3996737 | MS.gene072512:CDS | 35.0% | |
| CAACGTGTAACTGAAGAAAA+TGG | - | chr7.3:4000997-4001016 | MS.gene072512:intron | 35.0% | |
| CATTGTGAATTTCACGTTTC+CGG | + | chr7.3:4000616-4000635 | None:intergenic | 35.0% | |
| CCAAATAGAAATACAAGTGC+AGG | + | chr7.3:4001915-4001934 | None:intergenic | 35.0% | |
| CGTGAAATTCACAATGATTC+CGG | - | chr7.3:4000620-4000639 | MS.gene072512:intron | 35.0% | |
| CTCTTATGCATACAAACAAC+CGG | + | chr7.3:3999015-3999034 | None:intergenic | 35.0% | |
| CTGTTCTATTGAATCCGAAA+AGG | + | chr7.3:4000476-4000495 | None:intergenic | 35.0% | |
| CTTAATCTCTTTACTTTGGG+AGG | - | chr7.3:3997909-3997928 | MS.gene072512:intron | 35.0% | |
| GACACATAAGGAAATTGTTG+TGG | - | chr7.3:3997941-3997960 | MS.gene072512:intron | 35.0% | |
| GATGCAGTTTACACTTCATT+TGG | - | chr7.3:4002244-4002263 | MS.gene072512:CDS | 35.0% | |
| GCGAATACTTTCATTACACA+TGG | + | chr7.3:4000336-4000355 | None:intergenic | 35.0% | |
| GCTGAATTGGGAAATATTGA+AGG | + | chr7.3:4000106-4000125 | None:intergenic | 35.0% | |
| GGGGATATAATATATAGTGC+TGG | + | chr7.3:4000375-4000394 | None:intergenic | 35.0% | |
| TAATGCTCCTAAGATCAAAG+AGG | + | chr7.3:3999453-3999472 | None:intergenic | 35.0% | |
| TACACAATCTTCCATTTGGT+AGG | - | chr7.3:3996889-3996908 | MS.gene072512:CDS | 35.0% | |
| TAGACACTAATTAGGGAACA+CGG | - | chr7.3:3997382-3997401 | MS.gene072512:intron | 35.0% | |
| TAGCTACACAATCTTCCATT+TGG | - | chr7.3:3996885-3996904 | MS.gene072512:CDS | 35.0% | |
| TAGCTTTCCAGTATTCATTC+CGG | + | chr7.3:4000226-4000245 | None:intergenic | 35.0% | |
| TCAAGAACATGCTTACAAGT+AGG | - | chr7.3:4001459-4001478 | MS.gene072512:intron | 35.0% | |
| TCAAGGATTGTAACATCTGA+AGG | + | chr7.3:4001976-4001995 | None:intergenic | 35.0% | |
| TCTTATGCATACAAACAACC+GGG | + | chr7.3:3999014-3999033 | None:intergenic | 35.0% | |
| TGCTTACAAGTAGGAATTCT+GGG | - | chr7.3:4001468-4001487 | MS.gene072512:intron | 35.0% | |
| TGGTTCAATTGGTTAAAAGG+AGG | + | chr7.3:3999652-3999671 | None:intergenic | 35.0% | |
| TTACTATATCTGCAGATTCC+AGG | - | chr7.3:3997113-3997132 | MS.gene072512:intron | 35.0% | |
| TTTCGGATTCAATAGAACAG+TGG | - | chr7.3:4000476-4000495 | MS.gene072512:intron | 35.0% | |
| TTTGAAAAGACAGGATTCAG+TGG | - | chr7.3:4001599-4001618 | MS.gene072512:intron | 35.0% | |
| TTTGGAGGAAGTTGTTATAC+AGG | - | chr7.3:4002315-4002334 | MS.gene072512:CDS | 35.0% | |
| ! | CCTGCACTTGTATTTCTATT+TGG | - | chr7.3:4001912-4001931 | MS.gene072512:intron | 35.0% |
| ! | GATGTTTTATGGGTTTGACA+TGG | + | chr7.3:4000563-4000582 | None:intergenic | 35.0% |
| ! | TAATGGTTTGAAACATGTGC+AGG | + | chr7.3:3999612-3999631 | None:intergenic | 35.0% |
| ! | TGTATAGATTGTGCTGATGT+TGG | - | chr7.3:3998071-3998090 | MS.gene072512:intron | 35.0% |
| ! | TTTAACCCTCTTCCTCTTTT+TGG | - | chr7.3:3997337-3997356 | MS.gene072512:intron | 35.0% |
| ! | TTTGGGTTTCTGGGTAAATA+CGG | + | chr7.3:3997051-3997070 | None:intergenic | 35.0% |
| ! | TTTTAACCCTCAGGTTTGTA+GGG | - | chr7.3:4001148-4001167 | MS.gene072512:intron | 35.0% |
| !! | AATTCAGCTTCCATTTTTCC+TGG | + | chr7.3:4001413-4001432 | None:intergenic | 35.0% |
| !! | ATGGAAGCTGAATTTGCTAA+AGG | - | chr7.3:4001419-4001438 | MS.gene072512:intron | 35.0% |
| !! | ATGGACTGGAGCAAAAATTA+AGG | - | chr7.3:4002192-4002211 | MS.gene072512:CDS | 35.0% |
| !! | ATTTTTGCAGGAGTGCATTT+CGG | - | chr7.3:4000141-4000160 | MS.gene072512:intron | 35.0% |
| !! | CATCAACAGGTTTCACTTTT+GGG | + | chr7.3:3997068-3997087 | None:intergenic | 35.0% |
| !! | GACATGGTTATTTTGTTTCC+TGG | + | chr7.3:4000547-4000566 | None:intergenic | 35.0% |
| !! | TTTGATCTTAGGAGCATTAG+AGG | - | chr7.3:3999454-3999473 | MS.gene072512:intron | 35.0% |
| !!! | AGAAATTGGTTTTAACCCTC+AGG | - | chr7.3:4001139-4001158 | MS.gene072512:intron | 35.0% |
| !!! | TGCGTGGGATTTTGATTTTT+GGG | - | chr7.3:3999870-3999889 | MS.gene072512:intron | 35.0% |
| !!! | TTGCGTGGGATTTTGATTTT+TGG | - | chr7.3:3999869-3999888 | MS.gene072512:intron | 35.0% |
| AAAACTGGAACACGATTTCC+AGG | - | chr7.3:4000526-4000545 | MS.gene072512:intron | 40.0% | |
| AAATCAAAATCCCACGCAAC+AGG | + | chr7.3:3999868-3999887 | None:intergenic | 40.0% | |
| AACATTCCATCACAAGAAGC+TGG | - | chr7.3:3999356-3999375 | MS.gene072512:intron | 40.0% | |
| AATGGTTAATGAGCTCCTCT+AGG | + | chr7.3:4001278-4001297 | None:intergenic | 40.0% | |
| ACAAAGCAATACATCGAGAG+TGG | - | chr7.3:4002268-4002287 | MS.gene072512:CDS | 40.0% | |
| AGTTGTTATACAGGAAGGTG+TGG | - | chr7.3:4002324-4002343 | MS.gene072512:CDS | 40.0% | |
| ATGTTCTTGATCAGCAGTTC+TGG | + | chr7.3:4001449-4001468 | None:intergenic | 40.0% | |
| ATTGAGCTAGCTCATGAGAA+AGG | + | chr7.3:3999242-3999261 | None:intergenic | 40.0% | |
| CAAATATCAATCCATGTGCC+AGG | - | chr7.3:4001385-4001404 | MS.gene072512:intron | 40.0% | |
| CAACGATATCACCTACCAAA+TGG | + | chr7.3:3996903-3996922 | None:intergenic | 40.0% | |
| CACAGAACAGTGGAAGTAAA+TGG | - | chr7.3:3996682-3996701 | MS.gene072512:CDS | 40.0% | |
| CATTCACGTACCACTTATAC+AGG | - | chr7.3:4001698-4001717 | MS.gene072512:intron | 40.0% | |
| CATTTACACGAGTAGCACTT+TGG | + | chr7.3:3999106-3999125 | None:intergenic | 40.0% | |
| CCAAAAGTGAAACCTGTTGA+TGG | - | chr7.3:3997066-3997085 | MS.gene072512:intron | 40.0% | |
| CCTGTGGATAAAACCCATAT+GGG | + | chr7.3:3998129-3998148 | None:intergenic | 40.0% | |
| CTAAGATCAAAGAGGTGATG+CGG | + | chr7.3:3999445-3999464 | None:intergenic | 40.0% | |
| CTATCACTAGTCACACTTGA+CGG | - | chr7.3:3997990-3998009 | MS.gene072512:intron | 40.0% | |
| CTTATGCATACAAACAACCG+GGG | + | chr7.3:3999013-3999032 | None:intergenic | 40.0% | |
| GAAAGATGTGCCAAATTTGG+AGG | - | chr7.3:4002300-4002319 | MS.gene072512:CDS | 40.0% | |
| GAGGAAGTTGTTATACAGGA+AGG | - | chr7.3:4002319-4002338 | MS.gene072512:CDS | 40.0% | |
| GATAGGCCGGATAAAAACTT+GGG | - | chr7.3:3999970-3999989 | MS.gene072512:intron | 40.0% | |
| GGTGAGACAAGAGATATGAT+GGG | + | chr7.3:3998554-3998573 | None:intergenic | 40.0% | |
| GGTGATCCTACTCCTAATAT+TGG | - | chr7.3:3997962-3997981 | MS.gene072512:intron | 40.0% | |
| GTACTTGAAGCATGTGGATT+AGG | + | chr7.3:4001524-4001543 | None:intergenic | 40.0% | |
| GTGTAGCTACTAACTGAAGT+CGG | + | chr7.3:3996874-3996893 | None:intergenic | 40.0% | |
| GTTCTGCACACTTAGGAATT+AGG | - | chr7.3:3999678-3999697 | MS.gene072512:intron | 40.0% | |
| TAATTCAGGGATAAGTCGGA+GGG | - | chr7.3:3999417-3999436 | MS.gene072512:intron | 40.0% | |
| TATCACTAGTCACACTTGAC+GGG | - | chr7.3:3997991-3998010 | MS.gene072512:intron | 40.0% | |
| TATTTCCCCTACAAACCTGA+GGG | + | chr7.3:4001157-4001176 | None:intergenic | 40.0% | |
| TCCACATGCTTCAAGTACAA+AGG | - | chr7.3:4001526-4001545 | MS.gene072512:intron | 40.0% | |
| TGATAGGCCGGATAAAAACT+TGG | - | chr7.3:3999969-3999988 | MS.gene072512:intron | 40.0% | |
| TGTTCTTGATCAGCAGTTCT+GGG | + | chr7.3:4001448-4001467 | None:intergenic | 40.0% | |
| TTAATTCAGGGATAAGTCGG+AGG | - | chr7.3:3999416-3999435 | MS.gene072512:intron | 40.0% | |
| TTATTTCCCCTACAAACCTG+AGG | + | chr7.3:4001158-4001177 | None:intergenic | 40.0% | |
| TTCCTGAACTTTGGTACTCT+TGG | - | chr7.3:3996767-3996786 | MS.gene072512:CDS | 40.0% | |
| TTGAAACATGTGCAGGTTCT+AGG | + | chr7.3:3999605-3999624 | None:intergenic | 40.0% | |
| TTGGGAAACGTTTATGGTGA+AGG | + | chr7.3:4000174-4000193 | None:intergenic | 40.0% | |
| TTTAACCCTCAGGTTTGTAG+GGG | - | chr7.3:4001149-4001168 | MS.gene072512:intron | 40.0% | |
| TTTCTGCCAGAAATCGAACT+CGG | - | chr7.3:4001233-4001252 | MS.gene072512:intron | 40.0% | |
| ! | AACACTGATGATGCTGCTTA+TGG | + | chr7.3:3999392-3999411 | None:intergenic | 40.0% |
| ! | AGGGGTGAAAGTATATGTGT+CGG | + | chr7.3:4000013-4000032 | None:intergenic | 40.0% |
| ! | CCATCAACAGGTTTCACTTT+TGG | + | chr7.3:3997069-3997088 | None:intergenic | 40.0% |
| ! | TGATTTGTACGTGGTAGACT+TGG | - | chr7.3:3997261-3997280 | MS.gene072512:intron | 40.0% |
| ! | TGGAAATCGTGTTCCAGTTT+TGG | + | chr7.3:4000527-4000546 | None:intergenic | 40.0% |
| ! | TGGGGTGAAGGTATAAATGT+GGG | - | chr7.3:4000796-4000815 | MS.gene072512:intron | 40.0% |
| ! | TTAGGTATCACGCCTTCTTT+TGG | + | chr7.3:4001506-4001525 | None:intergenic | 40.0% |
| ! | TTGGGGTGAAGGTATAAATG+TGG | - | chr7.3:4000795-4000814 | MS.gene072512:intron | 40.0% |
| ! | TTTATCCACAGGGTTTTCCT+TGG | - | chr7.3:3998137-3998156 | MS.gene072512:intron | 40.0% |
| !! | CCATATGGGTTTTATCCACA+GGG | - | chr7.3:3998127-3998146 | MS.gene072512:intron | 40.0% |
| !! | GAAGCTGAATTTGCTAAAGG+TGG | - | chr7.3:4001422-4001441 | MS.gene072512:intron | 40.0% |
| !! | GTTTTAACCCTCAGGTTTGT+AGG | - | chr7.3:4001147-4001166 | MS.gene072512:intron | 40.0% |
| !! | TATTGTCGCAACGCCATTTT+TGG | + | chr7.3:3999831-3999850 | None:intergenic | 40.0% |
| !! | TCCTCTAGGACAAATCGTTT+GGG | + | chr7.3:4001264-4001283 | None:intergenic | 40.0% |
| !! | TCTTAATTTGCCTGTTGCGT+GGG | - | chr7.3:3999855-3999874 | MS.gene072512:intron | 40.0% |
| !!! | AGGTTTCACTTTTGGGTTTC+TGG | + | chr7.3:3997061-3997080 | None:intergenic | 40.0% |
| !!! | GGGATTTTGATTTTTGGGTG+TGG | - | chr7.3:3999875-3999894 | MS.gene072512:intron | 40.0% |
| !!! | GGTTTCACTTTTGGGTTTCT+GGG | + | chr7.3:3997060-3997079 | None:intergenic | 40.0% |
| AAAGTTCAGGAAAGCCGTGA+AGG | + | chr7.3:3996759-3996778 | None:intergenic | 45.0% | |
| AAGCAATACATCGAGAGTGG+AGG | - | chr7.3:4002271-4002290 | MS.gene072512:CDS | 45.0% | |
| AAGGTATAAATGTGGGGGTG+TGG | - | chr7.3:4000803-4000822 | MS.gene072512:intron | 45.0% | |
| ACGTACCACTTATACAGGTC+CGG | - | chr7.3:4001703-4001722 | MS.gene072512:intron | 45.0% | |
| ACTAACTGAAGTCGGAGCAT+CGG | + | chr7.3:3996866-3996885 | None:intergenic | 45.0% | |
| AGCTAGCTCATGAGAAAGGT+TGG | + | chr7.3:3999238-3999257 | None:intergenic | 45.0% | |
| CACCAATGACACCAAAGCTA+TGG | - | chr7.3:3999078-3999097 | MS.gene072512:intron | 45.0% | |
| CACGCAACAGGCAAATTAAG+AGG | + | chr7.3:3999856-3999875 | None:intergenic | 45.0% | |
| CCACCAATCCTACCAAAAGA+AGG | - | chr7.3:4001491-4001510 | MS.gene072512:intron | 45.0% | |
| CCCTGTGGATAAAACCCATA+TGG | + | chr7.3:3998130-3998149 | None:intergenic | 45.0% | |
| CGCATCACCTCTTTGATCTT+AGG | - | chr7.3:3999443-3999462 | MS.gene072512:intron | 45.0% | |
| CGTGTCAAATATTGGGGTGA+AGG | - | chr7.3:4000784-4000803 | MS.gene072512:intron | 45.0% | |
| CTTCTTGTGAGAGCCAAGAA+GGG | + | chr7.3:4001556-4001575 | None:intergenic | 45.0% | |
| GAGAAACCGAGTTCGATTTC+TGG | + | chr7.3:4001242-4001261 | None:intergenic | 45.0% | |
| GCCTTTGTACTTGAAGCATG+TGG | + | chr7.3:4001530-4001549 | None:intergenic | 45.0% | |
| GGCAGAAACAATTCTTGACC+AGG | + | chr7.3:4001221-4001240 | None:intergenic | 45.0% | |
| GGGTGAGACAAGAGATATGA+TGG | + | chr7.3:3998555-3998574 | None:intergenic | 45.0% | |
| GGTACGTGAATGATGCACAA+GGG | + | chr7.3:4001690-4001709 | None:intergenic | 45.0% | |
| GTACGTGAATGATGCACAAG+GGG | + | chr7.3:4001689-4001708 | None:intergenic | 45.0% | |
| TAAATGGGGAAAGAGCCGTA+AGG | + | chr7.3:3999938-3999957 | None:intergenic | 45.0% | |
| TACGTGTCCGGAATGAATAC+TGG | - | chr7.3:4000216-4000235 | MS.gene072512:intron | 45.0% | |
| TCAAACTTGGGATGTGTGTG+TGG | - | chr7.3:3999037-3999056 | MS.gene072512:intron | 45.0% | |
| TCACCTGTGATGAATGTCAC+TGG | + | chr7.3:4002220-4002239 | None:intergenic | 45.0% | |
| TCATATCTCTTGTCTCACCC+CGG | - | chr7.3:3998555-3998574 | MS.gene072512:intron | 45.0% | |
| TCCCAAACGATTTGTCCTAG+AGG | - | chr7.3:4001260-4001279 | MS.gene072512:intron | 45.0% | |
| TCTCGAAGGTAAGTAAAGCC+TGG | - | chr7.3:4001200-4001219 | MS.gene072512:intron | 45.0% | |
| TCTTCTTGTGAGAGCCAAGA+AGG | + | chr7.3:4001557-4001576 | None:intergenic | 45.0% | |
| TGATATCCTCAGCAGCTTCT+TGG | + | chr7.3:4002363-4002382 | None:intergenic | 45.0% | |
| TGGTACGTGAATGATGCACA+AGG | + | chr7.3:4001691-4001710 | None:intergenic | 45.0% | |
| TTCACGGCTTTCCTGAACTT+TGG | - | chr7.3:3996758-3996777 | MS.gene072512:CDS | 45.0% | |
| ! | ACGCCTTCTTTTGGTAGGAT+TGG | + | chr7.3:4001497-4001516 | None:intergenic | 45.0% |
| ! | AGAAGGTTTTCCGGCAAAGA+AGG | - | chr7.3:4000691-4000710 | MS.gene072512:intron | 45.0% |
| ! | AGGTATAAATGTGGGGGTGT+GGG | - | chr7.3:4000804-4000823 | MS.gene072512:intron | 45.0% |
| ! | CCTTCTTTTGGTAGGATTGG+TGG | + | chr7.3:4001494-4001513 | None:intergenic | 45.0% |
| ! | GAAGGTTTTCCGGCAAAGAA+GGG | - | chr7.3:4000692-4000711 | MS.gene072512:intron | 45.0% |
| ! | GAGATATGATGGGAGTTGTC+AGG | + | chr7.3:3998544-3998563 | None:intergenic | 45.0% |
| ! | GATGCTGCTTATGGTAGTCT+TGG | + | chr7.3:3999383-3999402 | None:intergenic | 45.0% |
| ! | GGGGTGAAAGTATATGTGTC+GGG | + | chr7.3:4000012-4000031 | None:intergenic | 45.0% |
| ! | GGGGTGAAGGTATAAATGTG+GGG | - | chr7.3:4000797-4000816 | MS.gene072512:intron | 45.0% |
| ! | GGGTGAAAGTATATGTGTCG+GGG | + | chr7.3:4000011-4000030 | None:intergenic | 45.0% |
| ! | GGGTGAAGGTATAAATGTGG+GGG | - | chr7.3:4000798-4000817 | MS.gene072512:intron | 45.0% |
| ! | GTATCACGCCTTCTTTTGGT+AGG | + | chr7.3:4001502-4001521 | None:intergenic | 45.0% |
| !! | AAATTGTTTTGCCCTTGGGC+TGG | - | chr7.3:4001888-4001907 | MS.gene072512:intron | 45.0% |
| !! | CAAGGGGCACCTAGTTAATT+TGG | + | chr7.3:4001673-4001692 | None:intergenic | 45.0% |
| !! | CCCATATGGGTTTTATCCAC+AGG | - | chr7.3:3998126-3998145 | MS.gene072512:intron | 45.0% |
| !! | CTCCTCTAGGACAAATCGTT+TGG | + | chr7.3:4001265-4001284 | None:intergenic | 45.0% |
| !! | CTCTTAATTTGCCTGTTGCG+TGG | - | chr7.3:3999854-3999873 | MS.gene072512:intron | 45.0% |
| !! | CTTCCATTTTTCCTGGTTCC+TGG | + | chr7.3:4001406-4001425 | None:intergenic | 45.0% |
| !! | GTAGTTGGGTTGTTGCTTTC+TGG | + | chr7.3:3999743-3999762 | None:intergenic | 45.0% |
| !! | TGCCATAGCTTTGGTGTCAT+TGG | + | chr7.3:3999083-3999102 | None:intergenic | 45.0% |
| !!! | TAAAATTTATACTTTTTTTA+AGG | + | chr7.3:3997821-3997840 | None:intergenic | 5.0% |
| AAAGCTCGCATGCCATCAAC+AGG | + | chr7.3:3997081-3997100 | None:intergenic | 50.0% | |
| AACTTGGGATGTGTGTGTGG+TGG | - | chr7.3:3999040-3999059 | MS.gene072512:intron | 50.0% | |
| AAGGAAAACCCTGTGGAACC+GGG | + | chr7.3:3998576-3998595 | None:intergenic | 50.0% | |
| AATCCAGAGTTCGGTCTCGA+AGG | - | chr7.3:4001186-4001205 | MS.gene072512:intron | 50.0% | |
| ACTTATACAGGTCCGGTCGA+AGG | - | chr7.3:4001710-4001729 | MS.gene072512:intron | 50.0% | |
| AGGAGTAGAGCACAGAACAG+TGG | - | chr7.3:3996672-3996691 | MS.gene072512:CDS | 50.0% | |
| CAACAACCAAGAAGCTGCTG+AGG | - | chr7.3:4002354-4002373 | MS.gene072512:CDS | 50.0% | |
| CAAGGAAAACCCTGTGGAAC+CGG | + | chr7.3:3998577-3998596 | None:intergenic | 50.0% | |
| CCTGTTGTCCTGTTCCTTCA+CGG | - | chr7.3:3996742-3996761 | MS.gene072512:CDS | 50.0% | |
| CTTCACCAAGGAAAACCCTG+TGG | + | chr7.3:3998145-3998164 | None:intergenic | 50.0% | |
| CTTCCTCGTTGCTCATGACT+GGG | - | chr7.3:3996954-3996973 | MS.gene072512:intron | 50.0% | |
| CTTGGTCCAGCTTCTTGTGA+TGG | + | chr7.3:3999365-3999384 | None:intergenic | 50.0% | |
| GAGAGAGCAATTCACGATGC+TGG | - | chr7.3:4000416-4000435 | MS.gene072512:intron | 50.0% | |
| GTGCCAGGAACCAGGAAAAA+TGG | - | chr7.3:4001400-4001419 | MS.gene072512:intron | 50.0% | |
| GTGCCAGTGACATTCATCAC+AGG | - | chr7.3:4002214-4002233 | MS.gene072512:CDS | 50.0% | |
| TCTTCCTCGTTGCTCATGAC+TGG | - | chr7.3:3996953-3996972 | MS.gene072512:intron | 50.0% | |
| TTACCTTCGAGACCGAACTC+TGG | + | chr7.3:4001192-4001211 | None:intergenic | 50.0% | |
| TTCCTCGTTGCTCATGACTG+GGG | - | chr7.3:3996955-3996974 | MS.gene072512:intron | 50.0% | |
| TTCGACCGGACCTGTATAAG+TGG | + | chr7.3:4001711-4001730 | None:intergenic | 50.0% | |
| TTGTGAGAGCCAAGAAGGGA+GGG | + | chr7.3:4001552-4001571 | None:intergenic | 50.0% | |
| ! | GGTATAAATGTGGGGGTGTG+GGG | - | chr7.3:4000805-4000824 | MS.gene072512:intron | 50.0% |
| ! | TGTGGTGGAGATGCAAGCTA+TGG | - | chr7.3:3999055-3999074 | MS.gene072512:intron | 50.0% |
| ! | TTTTCCTGGTTCCTGGCACA+TGG | + | chr7.3:4001399-4001418 | None:intergenic | 50.0% |
| !! | CGCCAAGAGTACCAAAGTTC+AGG | + | chr7.3:3996772-3996791 | None:intergenic | 50.0% |
| !! | GATGGCATGCGAGCTTTGTT+TGG | - | chr7.3:3997084-3997103 | MS.gene072512:intron | 50.0% |
| !! | GCACTTTGGTGCCATAGCTT+TGG | + | chr7.3:3999092-3999111 | None:intergenic | 50.0% |
| !! | GTTGCTCTCATCGACTCACT+CGG | - | chr7.3:3996919-3996938 | MS.gene072512:intron | 50.0% |
| AGCAACAGCACGGTAACCGA+GGG | + | chr7.3:3996818-3996837 | None:intergenic | 55.0% | |
| AGGAAAACCCTGTGGAACCG+GGG | + | chr7.3:3998575-3998594 | None:intergenic | 55.0% | |
| ATTGGGAGCTCACTGCAGCA+TGG | - | chr7.3:4002173-4002192 | MS.gene072512:CDS | 55.0% | |
| CAATCCATGTGCCAGGAACC+AGG | - | chr7.3:4001392-4001411 | MS.gene072512:intron | 55.0% | |
| CAGGAAAGCCGTGAAGGAAC+AGG | + | chr7.3:3996753-3996772 | None:intergenic | 55.0% | |
| CCCACAGAACCCTTCTTTGC+CGG | + | chr7.3:4000704-4000723 | None:intergenic | 55.0% | |
| CCCAGGTTTGAACCTTCGAC+CGG | + | chr7.3:4001725-4001744 | None:intergenic | 55.0% | |
| CCGGCAAAGAAGGGTTCTGT+GGG | - | chr7.3:4000701-4000720 | MS.gene072512:intron | 55.0% | |
| CCGGTCGAAGGTTCAAACCT+GGG | - | chr7.3:4001722-4001741 | MS.gene072512:intron | 55.0% | |
| CCGTGAAGGAACAGGACAAC+AGG | + | chr7.3:3996745-3996764 | None:intergenic | 55.0% | |
| CGGCAAAGAAGGGTTCTGTG+GGG | - | chr7.3:4000702-4000721 | MS.gene072512:intron | 55.0% | |
| CTTCATAGCCTGCTTGACCC+AGG | + | chr7.3:4001742-4001761 | None:intergenic | 55.0% | |
| CTTGTGAGAGCCAAGAAGGG+AGG | + | chr7.3:4001553-4001572 | None:intergenic | 55.0% | |
| GCTCCAGATCTCCGTGGATA+CGG | - | chr7.3:3996835-3996854 | MS.gene072512:CDS | 55.0% | |
| GGCAAAGAAGGGTTCTGTGG+GGG | - | chr7.3:4000703-4000722 | MS.gene072512:intron | 55.0% | |
| GGTTCAAACCTGGGTCAAGC+AGG | - | chr7.3:4001731-4001750 | MS.gene072512:intron | 55.0% | |
| GGTTCTGTGGGGGTCAACAA+GGG | - | chr7.3:4000713-4000732 | MS.gene072512:intron | 55.0% | |
| GTACAAAGGCCCTCCCTTCT+TGG | - | chr7.3:4001540-4001559 | MS.gene072512:intron | 55.0% | |
| TCACCGTATCCACGGAGATC+TGG | + | chr7.3:3996841-3996860 | None:intergenic | 55.0% | |
| TCCGGCAAAGAAGGGTTCTG+TGG | - | chr7.3:4000700-4000719 | MS.gene072512:intron | 55.0% | |
| TCCGGTCGAAGGTTCAAACC+TGG | - | chr7.3:4001721-4001740 | MS.gene072512:intron | 55.0% | |
| ! | ACTGGGGTGCCATGATTGGT+TGG | - | chr7.3:3996971-3996990 | MS.gene072512:intron | 55.0% |
| ! | CATGACTGGGGTGCCATGAT+TGG | - | chr7.3:3996967-3996986 | MS.gene072512:intron | 55.0% |
| ! | CGGTTCCACAGGGTTTTCCT+TGG | - | chr7.3:3998575-3998594 | MS.gene072512:intron | 55.0% |
| ! | GGAGATCTGGAGCAACAGCA+CGG | + | chr7.3:3996828-3996847 | None:intergenic | 55.0% |
| !! | CATCGGTGTCACCGTATCCA+CGG | + | chr7.3:3996849-3996868 | None:intergenic | 55.0% |
| CACCCCAGTCATGAGCAACG+AGG | + | chr7.3:3996960-3996979 | None:intergenic | 60.0% | |
| CTCTTGGCGCCACCAGATTG+CGG | - | chr7.3:3996783-3996802 | MS.gene072512:CDS | 60.0% | |
| GAGCAACAGCACGGTAACCG+AGG | + | chr7.3:3996819-3996838 | None:intergenic | 60.0% | |
| GAGCTCACTGCAGCATGGAC+TGG | - | chr7.3:4002178-4002197 | MS.gene072512:CDS | 60.0% | |
| GCTGTTGCTCCAGATCTCCG+TGG | - | chr7.3:3996829-3996848 | MS.gene072512:CDS | 60.0% | |
| GGGTTCTGTGGGGGTCAACA+AGG | - | chr7.3:4000712-4000731 | MS.gene072512:intron | 60.0% | |
| TGTCTCACCCCGGTTCCACA+GGG | - | chr7.3:3998565-3998584 | MS.gene072512:intron | 60.0% | |
| TTGTCTCACCCCGGTTCCAC+AGG | - | chr7.3:3998564-3998583 | MS.gene072512:intron | 60.0% | |
| ACAAGTGCAGGGCCAGCCCA+AGG | + | chr7.3:4001903-4001922 | None:intergenic | 65.0% | |
| AGCCGAGAGCCGCAATCTGG+TGG | + | chr7.3:3996795-3996814 | None:intergenic | 65.0% | |
| ATTGCGGCTCTCGGCTCCCT+CGG | - | chr7.3:3996799-3996818 | MS.gene072512:CDS | 65.0% | |
| CAAGTGCAGGGCCAGCCCAA+GGG | + | chr7.3:4001902-4001921 | None:intergenic | 65.0% | |
| CGCCACCAGATTGCGGCTCT+CGG | - | chr7.3:3996790-3996809 | MS.gene072512:CDS | 65.0% | |
| GGGAGCCGAGAGCCGCAATC+TGG | + | chr7.3:3996798-3996817 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 3996667 | 4002417 | 3996667 | ID=MS.gene072512 |
| chr7.3 | mRNA | 3996667 | 4002417 | 3996667 | ID=MS.gene072512.t1;Parent=MS.gene072512 |
| chr7.3 | exon | 4001950 | 4002417 | 4001950 | ID=MS.gene072512.t1.exon1;Parent=MS.gene072512.t1 |
| chr7.3 | CDS | 4001950 | 4002417 | 4001950 | ID=cds.MS.gene072512.t1;Parent=MS.gene072512.t1 |
| chr7.3 | exon | 3997433 | 3997677 | 3997433 | ID=MS.gene072512.t1.exon2;Parent=MS.gene072512.t1 |
| chr7.3 | CDS | 3997433 | 3997677 | 3997433 | ID=cds.MS.gene072512.t1;Parent=MS.gene072512.t1 |
| chr7.3 | exon | 3996667 | 3996913 | 3996667 | ID=MS.gene072512.t1.exon3;Parent=MS.gene072512.t1 |
| chr7.3 | CDS | 3996667 | 3996913 | 3996667 | ID=cds.MS.gene072512.t1;Parent=MS.gene072512.t1 |
| Gene Sequence |
| Protein sequence |
