Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene041604.t1 | KEH32298.1 | 96.9 | 321 | 10 | 0 | 1 | 321 | 35 | 355 | 8.50E-191 | 676 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene041604.t1 | I6YGS0 | 36.2 | 320 | 182 | 7 | 9 | 317 | 7 | 315 | 1.1e-53 | 211.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene041604.t1 | A0A072UTA2 | 96.9 | 321 | 10 | 0 | 1 | 321 | 35 | 355 | 6.1e-191 | 676.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene041604.t1 | MTR_4g120240 | 96.885 | 321 | 10 | 0 | 1 | 321 | 35 | 355 | 0.0 | 650 |
| MS.gene041604.t1 | MTR_7g108825 | 61.755 | 319 | 120 | 1 | 3 | 321 | 1 | 317 | 3.29e-149 | 422 |
| MS.gene041604.t1 | MTR_7g112970 | 61.562 | 320 | 118 | 3 | 3 | 321 | 1 | 316 | 6.33e-149 | 421 |
| MS.gene041604.t1 | MTR_7g113020 | 62.305 | 321 | 117 | 3 | 3 | 321 | 1 | 319 | 2.66e-147 | 417 |
| MS.gene041604.t1 | MTR_7g112960 | 61.994 | 321 | 118 | 3 | 3 | 321 | 1 | 319 | 1.18e-146 | 416 |
| MS.gene041604.t1 | MTR_7g112963 | 61.682 | 321 | 119 | 3 | 3 | 321 | 1 | 319 | 1.97e-146 | 415 |
| MS.gene041604.t1 | MTR_7g113050 | 60.436 | 321 | 123 | 3 | 3 | 321 | 1 | 319 | 5.07e-145 | 411 |
| MS.gene041604.t1 | MTR_7g112615 | 60.436 | 321 | 123 | 3 | 3 | 321 | 1 | 319 | 3.12e-144 | 409 |
| MS.gene041604.t1 | MTR_7g113030 | 59.813 | 321 | 125 | 3 | 3 | 321 | 1 | 319 | 1.75e-143 | 407 |
| MS.gene041604.t1 | MTR_7g112620 | 59.502 | 321 | 126 | 3 | 3 | 321 | 1 | 319 | 9.60e-142 | 403 |
| MS.gene041604.t1 | MTR_4g005160 | 56.173 | 324 | 135 | 4 | 3 | 321 | 1 | 322 | 3.84e-132 | 379 |
| MS.gene041604.t1 | MTR_7g113010 | 61.484 | 283 | 105 | 3 | 3 | 283 | 1 | 281 | 9.91e-125 | 369 |
| MS.gene041604.t1 | MTR_7g113050 | 62.083 | 240 | 87 | 3 | 3 | 240 | 1 | 238 | 1.84e-106 | 310 |
| MS.gene041604.t1 | MTR_8g076680 | 47.040 | 321 | 166 | 3 | 1 | 321 | 1 | 317 | 6.64e-105 | 310 |
| MS.gene041604.t1 | MTR_7g112615 | 61.250 | 240 | 89 | 3 | 3 | 240 | 1 | 238 | 1.64e-104 | 305 |
| MS.gene041604.t1 | MTR_7g108825 | 60.084 | 238 | 93 | 1 | 3 | 240 | 1 | 236 | 2.24e-103 | 303 |
| MS.gene041604.t1 | MTR_8g076680 | 48.750 | 240 | 121 | 1 | 1 | 240 | 1 | 238 | 7.19e-81 | 245 |
| MS.gene041604.t1 | MTR_7g112615 | 63.529 | 170 | 58 | 3 | 3 | 170 | 1 | 168 | 3.45e-73 | 224 |
| MS.gene041604.t1 | MTR_1g083480 | 60.000 | 160 | 59 | 2 | 3 | 159 | 1 | 158 | 5.07e-67 | 208 |
| MS.gene041604.t1 | MTR_2g090245 | 35.714 | 322 | 191 | 9 | 3 | 320 | 1 | 310 | 7.93e-59 | 191 |
| MS.gene041604.t1 | MTR_2g090240 | 33.851 | 322 | 197 | 8 | 3 | 320 | 1 | 310 | 1.34e-58 | 191 |
| MS.gene041604.t1 | MTR_4g089060 | 34.365 | 323 | 193 | 9 | 3 | 320 | 1 | 309 | 3.32e-57 | 187 |
| MS.gene041604.t1 | MTR_4g089040 | 32.710 | 321 | 201 | 7 | 3 | 320 | 1 | 309 | 2.30e-55 | 182 |
| MS.gene041604.t1 | MTR_4g089060 | 32.000 | 350 | 192 | 10 | 3 | 320 | 1 | 336 | 3.52e-52 | 175 |
| MS.gene041604.t1 | MTR_7g112910 | 41.129 | 248 | 88 | 7 | 76 | 321 | 4 | 195 | 1.06e-50 | 167 |
| MS.gene041604.t1 | MTR_4g089060 | 35.319 | 235 | 139 | 6 | 3 | 233 | 1 | 226 | 1.97e-44 | 152 |
| MS.gene041604.t1 | MTR_3g024250 | 57.009 | 107 | 44 | 1 | 49 | 155 | 3 | 107 | 8.35e-36 | 126 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene041604.t1 | AT4G02340 | 60.188 | 319 | 124 | 2 | 3 | 321 | 1 | 316 | 2.89e-150 | 425 |
| MS.gene041604.t1 | AT4G15960 | 59.259 | 324 | 127 | 1 | 3 | 321 | 51 | 374 | 1.51e-149 | 425 |
| MS.gene041604.t1 | AT3G05600 | 56.481 | 324 | 136 | 2 | 3 | 321 | 1 | 324 | 7.58e-140 | 399 |
| MS.gene041604.t1 | AT2G26740 | 57.321 | 321 | 132 | 3 | 6 | 321 | 1 | 321 | 9.38e-130 | 373 |
| MS.gene041604.t1 | AT2G26750 | 55.312 | 320 | 139 | 2 | 6 | 321 | 1 | 320 | 2.66e-127 | 367 |
| MS.gene041604.t1 | AT4G15955 | 54.321 | 324 | 114 | 4 | 7 | 321 | 6 | 304 | 1.71e-122 | 353 |
| MS.gene041604.t1 | AT3G51000 | 45.938 | 320 | 166 | 5 | 5 | 321 | 4 | 319 | 7.02e-100 | 297 |
| MS.gene041604.t1 | AT3G05600 | 56.790 | 243 | 100 | 2 | 3 | 240 | 1 | 243 | 1.84e-99 | 293 |
| MS.gene041604.t1 | AT4G15955 | 63.793 | 174 | 54 | 2 | 7 | 171 | 6 | 179 | 2.41e-79 | 239 |
| MS.gene041604.t1 | AT4G15955 | 63.636 | 165 | 51 | 2 | 7 | 162 | 6 | 170 | 8.23e-74 | 225 |
Find 0 sgRNAs with CRISPR-Local
Find 148 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CTAAATAGTTTTGAATTTTT+TGG | - | 32557:14399-14418 | MS.gene041604:intron | 15.0% |
| !!! | TTTTTTTACAGTAAAATCTA+TGG | - | 32557:15086-15105 | MS.gene041604:intron | 15.0% |
| !! | AACAATCAAATTTATCTCAT+TGG | + | 32557:15236-15255 | None:intergenic | 20.0% |
| !! | ATTTGATCAAGTAAATACTA+AGG | + | 32557:14378-14397 | None:intergenic | 20.0% |
| !! | TAATGAGTTAGTAAGAAATA+TGG | - | 32557:15184-15203 | MS.gene041604:CDS | 20.0% |
| !! | TTTGATCAAGTAAATACTAA+GGG | + | 32557:14377-14396 | None:intergenic | 20.0% |
| !!! | AATTTTTTAATTGAGCAAAC+CGG | - | 32557:14560-14579 | MS.gene041604:CDS | 20.0% |
| !!! | TTTACTTTGAAAATCATGAT+CGG | - | 32557:14619-14638 | MS.gene041604:CDS | 20.0% |
| ! | ATGTACAAACCTTAAATCTA+AGG | + | 32557:14337-14356 | None:intergenic | 25.0% |
| ! | TGTACAAACCTTAAATCTAA+GGG | + | 32557:14336-14355 | None:intergenic | 25.0% |
| ! | TTTACAGTAAAATCTATGGA+GGG | - | 32557:15090-15109 | MS.gene041604:intron | 25.0% |
| !! | CAAAGATATATTGTTCTAAG+TGG | - | 32557:14718-14737 | MS.gene041604:intron | 25.0% |
| !! | TTTTACAGTAAAATCTATGG+AGG | - | 32557:15089-15108 | MS.gene041604:intron | 25.0% |
| !!! | TTTTTTCAGATGTCTACTTT+CGG | + | 32557:14531-14550 | None:intergenic | 25.0% |
| AACACTATAGGAGAATCATT+TGG | + | 32557:14891-14910 | None:intergenic | 30.0% | |
| AATAAAGGATACCTGAAATC+TGG | + | 32557:14290-14309 | None:intergenic | 30.0% | |
| AATATGCACATAGCTGAAAA+GGG | - | 32557:13869-13888 | MS.gene041604:CDS | 30.0% | |
| ATTACCATAAACTGCTCTAA+GGG | + | 32557:14254-14273 | None:intergenic | 30.0% | |
| GTAAGTTTATCTTCAACTCT+AGG | - | 32557:15010-15029 | MS.gene041604:intron | 30.0% | |
| TCTGTCAATTGCAATATTAC+AGG | - | 32557:14746-14765 | MS.gene041604:intron | 30.0% | |
| TGTCTCTATCAATGTTTCAT+AGG | - | 32557:15276-15295 | MS.gene041604:CDS | 30.0% | |
| ! | ATTCTTGTTGTAATAGCCAT+GGG | + | 32557:14917-14936 | None:intergenic | 30.0% |
| AGAGATTACATTCACAAAGG+TGG | - | 32557:15453-15472 | MS.gene041604:CDS | 35.0% | |
| AGGATGTGGTAGTAATTGAA+GGG | - | 32557:15502-15521 | MS.gene041604:CDS | 35.0% | |
| AGTTCCAGTGAAGTTTATAG+TGG | - | 32557:15395-15414 | MS.gene041604:CDS | 35.0% | |
| ATCTAAGGGAGCTTATCTAT+AGG | + | 32557:14322-14341 | None:intergenic | 35.0% | |
| CAAATGCAAGAGAAGCAATA+TGG | + | 32557:15330-15349 | None:intergenic | 35.0% | |
| CAATATGCACATAGCTGAAA+AGG | - | 32557:13868-13887 | MS.gene041604:CDS | 35.0% | |
| CATTACCATAAACTGCTCTA+AGG | + | 32557:14255-14274 | None:intergenic | 35.0% | |
| CTACTATATCTCCAGATTTC+AGG | - | 32557:14276-14295 | MS.gene041604:intron | 35.0% | |
| CTCTTGCATTTGTAGAAACT+GGG | - | 32557:15338-15357 | MS.gene041604:CDS | 35.0% | |
| CTTTATCTACCTAAGGGTAA+AGG | - | 32557:14855-14874 | MS.gene041604:intron | 35.0% | |
| GAGATTACATTCACAAAGGT+GGG | - | 32557:15454-15473 | MS.gene041604:CDS | 35.0% | |
| GATAAGCTCCCTTAGATTTA+AGG | - | 32557:14325-14344 | MS.gene041604:intron | 35.0% | |
| GATAAGTCAGAAATTCCTTC+AGG | + | 32557:14821-14840 | None:intergenic | 35.0% | |
| GCAAGAGATTACATTCACAA+AGG | - | 32557:15450-15469 | MS.gene041604:CDS | 35.0% | |
| GTTCCAGTGAAGTTTATAGT+GGG | - | 32557:15396-15415 | MS.gene041604:CDS | 35.0% | |
| TCTAAGGGAGCTTATCTATA+GGG | + | 32557:14321-14340 | None:intergenic | 35.0% | |
| TCTCTTGCATTTGTAGAAAC+TGG | - | 32557:15337-15356 | MS.gene041604:CDS | 35.0% | |
| TTACCCTTAGGTAGATAAAG+TGG | + | 32557:14855-14874 | None:intergenic | 35.0% | |
| ! | CATTCTTGTTGTAATAGCCA+TGG | + | 32557:14918-14937 | None:intergenic | 35.0% |
| ! | GTATCAAGAGGCTTTCTTTT+GGG | + | 32557:14232-14251 | None:intergenic | 35.0% |
| ! | TATCAAGAGGCTTTCTTTTG+GGG | + | 32557:14231-14250 | None:intergenic | 35.0% |
| ! | TCCAGTCTTGTCAAATTTAG+AGG | + | 32557:14952-14971 | None:intergenic | 35.0% |
| ! | TGATCGGAATTTTCGAAATG+TGG | - | 32557:14635-14654 | MS.gene041604:intron | 35.0% |
| ! | TTCTTGTTGTAATAGCCATG+GGG | + | 32557:14916-14935 | None:intergenic | 35.0% |
| !! | CATATCGTTGGTGATATCAT+CGG | - | 32557:14058-14077 | MS.gene041604:intron | 35.0% |
| !!! | GTGGATTGGTGTAGTTATTT+TGG | - | 32557:14691-14710 | MS.gene041604:intron | 35.0% |
| AACTCTGCTTCTATATCACC+AGG | + | 32557:14774-14793 | None:intergenic | 40.0% | |
| AAGCTAGATATGTGATCTGG+TGG | + | 32557:13952-13971 | None:intergenic | 40.0% | |
| ACAAGAGCCTTGATTCTTTC+AGG | + | 32557:14178-14197 | None:intergenic | 40.0% | |
| AGCTTATCTATAGGGACTGA+GGG | + | 32557:14313-14332 | None:intergenic | 40.0% | |
| ATTGCAATATTACAGGAGCC+TGG | - | 32557:14753-14772 | MS.gene041604:intron | 40.0% | |
| CAAGAGCCTTGATTCTTTCA+GGG | + | 32557:14177-14196 | None:intergenic | 40.0% | |
| CAATCCACAAAAACTCAGCA+TGG | + | 32557:14679-14698 | None:intergenic | 40.0% | |
| CATGTTTGATCAGTAAGTGC+CGG | + | 32557:14582-14601 | None:intergenic | 40.0% | |
| CGATGATATCACCAACGATA+TGG | + | 32557:14060-14079 | None:intergenic | 40.0% | |
| GAGGATGTGGTAGTAATTGA+AGG | - | 32557:15501-15520 | MS.gene041604:CDS | 40.0% | |
| GATACCCTTAGAGCAGTTTA+TGG | - | 32557:14247-14266 | MS.gene041604:intron | 40.0% | |
| GCACTTCATCCATCAAGAAA+GGG | - | 32557:15530-15549 | MS.gene041604:CDS | 40.0% | |
| GCCTCTAAATTTGACAAGAC+TGG | - | 32557:14948-14967 | MS.gene041604:intron | 40.0% | |
| GGAAAGATACCAAGCAGTAA+GGG | + | 32557:14146-14165 | None:intergenic | 40.0% | |
| GGATGTGGTAGTAATTGAAG+GGG | - | 32557:15503-15522 | MS.gene041604:CDS | 40.0% | |
| GGTCCACTTTATCTACCTAA+GGG | - | 32557:14849-14868 | MS.gene041604:intron | 40.0% | |
| GTGCATATTGATGCCATTGA+AGG | + | 32557:13858-13877 | None:intergenic | 40.0% | |
| TAGGTAGATAAAGTGGACCA+GGG | + | 32557:14848-14867 | None:intergenic | 40.0% | |
| TATAGGGACTGAGGGAATAA+AGG | + | 32557:14305-14324 | None:intergenic | 40.0% | |
| TCACCCACTATAAACTTCAC+TGG | + | 32557:15402-15421 | None:intergenic | 40.0% | |
| TCTTATCAGCCCTTTCTTGA+TGG | + | 32557:15542-15561 | None:intergenic | 40.0% | |
| TGATATCACCAACGATATGG+AGG | + | 32557:14057-14076 | None:intergenic | 40.0% | |
| TGCCATTGAAGGTTACAGTT+CGG | + | 32557:13847-13866 | None:intergenic | 40.0% | |
| TGGTCCACTTTATCTACCTA+AGG | - | 32557:14848-14867 | MS.gene041604:intron | 40.0% | |
| TGTCCAAAACCTTTACCCTT+AGG | + | 32557:14867-14886 | None:intergenic | 40.0% | |
| TTAGGTAGATAAAGTGGACC+AGG | + | 32557:14849-14868 | None:intergenic | 40.0% | |
| TTGACAAGACTGGATTCACA+GGG | - | 32557:14958-14977 | MS.gene041604:intron | 40.0% | |
| TTTGACAAGACTGGATTCAC+AGG | - | 32557:14957-14976 | MS.gene041604:intron | 40.0% | |
| ! | ATCACATATCTAGCTTGCCA+TGG | - | 32557:13956-13975 | MS.gene041604:CDS | 40.0% |
| ! | CAATCCATGCTGAGTTTTTG+TGG | - | 32557:14672-14691 | MS.gene041604:intron | 40.0% |
| ! | CATGCTGAGTTTTTGTGGAT+TGG | - | 32557:14677-14696 | MS.gene041604:intron | 40.0% |
| ! | CTACCTAAGGGTAAAGGTTT+TGG | - | 32557:14861-14880 | MS.gene041604:intron | 40.0% |
| ! | GGAATTTTCGAAATGTGGAG+TGG | - | 32557:14640-14659 | MS.gene041604:intron | 40.0% |
| ! | GGTATCAAGAGGCTTTCTTT+TGG | + | 32557:14233-14252 | None:intergenic | 40.0% |
| ! | TCTTGTTGTAATAGCCATGG+GGG | + | 32557:14915-14934 | None:intergenic | 40.0% |
| !! | CAAGAGAAGGTGTTTGTTGT+GGG | - | 32557:14106-14125 | MS.gene041604:intron | 40.0% |
| !! | TCAAGAGAAGGTGTTTGTTG+TGG | - | 32557:14105-14124 | MS.gene041604:intron | 40.0% |
| CACATAGCTGAAAAGGGTCA+AGG | - | 32557:13875-13894 | MS.gene041604:CDS | 45.0% | |
| CACCGAACTGTAACCTTCAA+TGG | - | 32557:13842-13861 | MS.gene041604:CDS | 45.0% | |
| CATTGCTGGTGATCAAGAGA+AGG | - | 32557:14093-14112 | MS.gene041604:intron | 45.0% | |
| CGGCACTTACTGATCAAACA+TGG | - | 32557:14580-14599 | MS.gene041604:CDS | 45.0% | |
| CTATCGCCCTGAAAGAATCA+AGG | - | 32557:14168-14187 | MS.gene041604:intron | 45.0% | |
| CTTCTCTTGATCACCAGCAA+TGG | + | 32557:14095-14114 | None:intergenic | 45.0% | |
| GACCTTACCTATAATGCACC+TGG | - | 32557:15426-15445 | MS.gene041604:CDS | 45.0% | |
| GAGCTTATCTATAGGGACTG+AGG | + | 32557:14314-14333 | None:intergenic | 45.0% | |
| GATTCTTTCAGGGCGATAGA+GGG | + | 32557:14167-14186 | None:intergenic | 45.0% | |
| GCCATGAATACCATAGGTCA+GGG | + | 32557:13928-13947 | None:intergenic | 45.0% | |
| GGCAAGCTAGATATGTGATC+TGG | + | 32557:13955-13974 | None:intergenic | 45.0% | |
| GGCACTTCATCCATCAAGAA+AGG | - | 32557:15529-15548 | MS.gene041604:CDS | 45.0% | |
| GGGAAAGATACCAAGCAGTA+AGG | + | 32557:14147-14166 | None:intergenic | 45.0% | |
| TCCCTGACCTATGGTATTCA+TGG | - | 32557:13924-13943 | MS.gene041604:CDS | 45.0% | |
| TGAATGTAATCTCTTGCGCC+AGG | + | 32557:15447-15466 | None:intergenic | 45.0% | |
| TGACAAGACTGGATTCACAG+GGG | - | 32557:14959-14978 | MS.gene041604:intron | 45.0% | |
| TGATTCTTTCAGGGCGATAG+AGG | + | 32557:14168-14187 | None:intergenic | 45.0% | |
| TGGAACTGAAAGAGTCCTGA+AGG | - | 32557:14803-14822 | MS.gene041604:intron | 45.0% | |
| TGGTAGTAATTGAAGGGGCA+GGG | - | 32557:15508-15527 | MS.gene041604:CDS | 45.0% | |
| TTTCTGACTTATCGCAACCC+TGG | - | 32557:14828-14847 | MS.gene041604:intron | 45.0% | |
| ! | TTTGTTGTGGGCCATGATTG+GGG | - | 32557:14118-14137 | MS.gene041604:intron | 45.0% |
| !! | ACTGCTCTAAGGGTATCAAG+AGG | + | 32557:14244-14263 | None:intergenic | 45.0% |
| !! | GAAGCAGAGTTTGCTGAGAT+TGG | - | 32557:14783-14802 | MS.gene041604:intron | 45.0% |
| !! | GTTTGTTGTGGGCCATGATT+GGG | - | 32557:14117-14136 | MS.gene041604:intron | 45.0% |
| !! | TGTTTGTTGTGGGCCATGAT+TGG | - | 32557:14116-14135 | MS.gene041604:intron | 45.0% |
| !!! | GGCTTTCTTTTGGGGTTTCT+AGG | + | 32557:14223-14242 | None:intergenic | 45.0% |
| AACGATATGGAGGCTCGTGT+AGG | + | 32557:14047-14066 | None:intergenic | 50.0% | |
| ACTACCACATCCTCCAGAAG+TGG | + | 32557:15495-15514 | None:intergenic | 50.0% | |
| CCACTCATCCTCTTCATCCA+TGG | - | 32557:13899-13918 | MS.gene041604:CDS | 50.0% | |
| CCATGGATGAAGAGGATGAG+TGG | + | 32557:13902-13921 | None:intergenic | 50.0% | |
| CGCCAGGTGCATTATAGGTA+AGG | + | 32557:15431-15450 | None:intergenic | 50.0% | |
| CGCCATGAATACCATAGGTC+AGG | + | 32557:13929-13948 | None:intergenic | 50.0% | |
| GTGGTAGTAATTGAAGGGGC+AGG | - | 32557:15507-15526 | MS.gene041604:CDS | 50.0% | |
| TACACGAGCCTCCATATCGT+TGG | - | 32557:14046-14065 | MS.gene041604:CDS | 50.0% | |
| TATCAGTGTCTCCGTATCCG+CGG | + | 32557:14006-14025 | None:intergenic | 50.0% | |
| TCTTGCGCCAGGTGCATTAT+AGG | + | 32557:15436-15455 | None:intergenic | 50.0% | |
| TTGCCATGGTTACCGTTGTG+TGG | - | 32557:13970-13989 | MS.gene041604:CDS | 50.0% | |
| ! | TTGACTTGAGCACCAGTCCA+TGG | + | 32557:15375-15394 | None:intergenic | 50.0% |
| !! | GAAGAGAGATGTGCCACTTC+TGG | - | 32557:15479-15498 | MS.gene041604:CDS | 50.0% |
| ACCATAGGTCAGGGAAGCCA+TGG | + | 32557:13919-13938 | None:intergenic | 55.0% | |
| ACTGGGAGCTCAATGCTCCA+TGG | - | 32557:15355-15374 | MS.gene041604:CDS | 55.0% | |
| AGCCATGGGGGCAACACTAT+AGG | + | 32557:14903-14922 | None:intergenic | 55.0% | |
| CAGGGAAGCCATGGATGAAG+AGG | + | 32557:13910-13929 | None:intergenic | 55.0% | |
| CTCCTATAGTGTTGCCCCCA+TGG | - | 32557:14898-14917 | MS.gene041604:intron | 55.0% | |
| GAGCTCAATGCTCCATGGAC+TGG | - | 32557:15360-15379 | MS.gene041604:CDS | 55.0% | |
| GGACTTCTTGACGCCATTGC+TGG | - | 32557:14079-14098 | MS.gene041604:intron | 55.0% | |
| GGTGGCGCCATGAATACCAT+AGG | + | 32557:13934-13953 | None:intergenic | 55.0% | |
| TCCATGGCTTCCCTGACCTA+TGG | - | 32557:13915-13934 | MS.gene041604:CDS | 55.0% | |
| TGGAGGCTCGTGTAGGATGT+CGG | + | 32557:14040-14059 | None:intergenic | 55.0% | |
| ! | ATTGGGGTGCCCTTACTGCT+TGG | - | 32557:14134-14153 | MS.gene041604:intron | 55.0% |
| !! | CAGTAAGGGCACCCCAATCA+TGG | + | 32557:14132-14151 | None:intergenic | 55.0% |
| !! | GAGAGATGTGCCACTTCTGG+AGG | - | 32557:15482-15501 | MS.gene041604:CDS | 55.0% |
| !! | TGTGCCACTTCTGGAGGATG+TGG | - | 32557:15488-15507 | MS.gene041604:CDS | 55.0% |
| GCTCGTGTAGGATGTCGGTG+AGG | + | 32557:14035-14054 | None:intergenic | 60.0% | |
| GGGCCACACAACGGTAACCA+TGG | + | 32557:13976-13995 | None:intergenic | 60.0% | |
| GTGTAGGATGTCGGTGAGGC+TGG | + | 32557:14031-14050 | None:intergenic | 60.0% | |
| TCTCCGTATCCGCGGAGATC+CGG | + | 32557:13998-14017 | None:intergenic | 60.0% | |
| TGGTTACCGTTGTGTGGCCC+CGG | - | 32557:13976-13995 | MS.gene041604:CDS | 60.0% | |
| CTCCGTATCCGCGGAGATCC+GGG | + | 32557:13997-14016 | None:intergenic | 65.0% | |
| GGAGATCCGGGGCCACACAA+CGG | + | 32557:13985-14004 | None:intergenic | 65.0% | |
| TCCGTATCCGCGGAGATCCG+GGG | + | 32557:13996-14015 | None:intergenic | 65.0% | |
| GCCCCGGATCTCCGCGGATA+CGG | - | 32557:13992-14011 | MS.gene041604:CDS | 70.0% | |
| TGTGTGGCCCCGGATCTCCG+CGG | - | 32557:13986-14005 | MS.gene041604:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 32557 | gene | 13821 | 15599 | 13821 | ID=MS.gene041604 |
| 32557 | mRNA | 13821 | 15599 | 13821 | ID=MS.gene041604.t1;Parent=MS.gene041604 |
| 32557 | exon | 15123 | 15599 | 15123 | ID=MS.gene041604.t1.exon1;Parent=MS.gene041604.t1 |
| 32557 | CDS | 15123 | 15599 | 15123 | ID=cds.MS.gene041604.t1;Parent=MS.gene041604.t1 |
| 32557 | exon | 14411 | 14652 | 14411 | ID=MS.gene041604.t1.exon2;Parent=MS.gene041604.t1 |
| 32557 | CDS | 14411 | 14652 | 14411 | ID=cds.MS.gene041604.t1;Parent=MS.gene041604.t1 |
| 32557 | exon | 13821 | 14067 | 13821 | ID=MS.gene041604.t1.exon3;Parent=MS.gene041604.t1 |
| 32557 | CDS | 13821 | 14067 | 13821 | ID=cds.MS.gene041604.t1;Parent=MS.gene041604.t1 |
| Gene Sequence |
| Protein sequence |
