Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071502.t1 | KEH32298.1 | 96.6 | 321 | 11 | 0 | 1 | 321 | 35 | 355 | 5.50E-190 | 673.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071502.t1 | I6YGS0 | 36.2 | 320 | 182 | 7 | 9 | 317 | 7 | 315 | 4.9e-54 | 213.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071502.t1 | A0A072UTA2 | 96.6 | 321 | 11 | 0 | 1 | 321 | 35 | 355 | 4.0e-190 | 673.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071502.t1 | MTR_4g120240 | 96.573 | 321 | 11 | 0 | 1 | 321 | 35 | 355 | 0.0 | 649 |
| MS.gene071502.t1 | MTR_7g108825 | 61.129 | 319 | 122 | 1 | 3 | 321 | 1 | 317 | 3.17e-148 | 419 |
| MS.gene071502.t1 | MTR_7g112970 | 61.250 | 320 | 119 | 3 | 3 | 321 | 1 | 316 | 5.11e-148 | 419 |
| MS.gene071502.t1 | MTR_7g113020 | 61.994 | 321 | 118 | 3 | 3 | 321 | 1 | 319 | 2.17e-146 | 415 |
| MS.gene071502.t1 | MTR_7g112960 | 61.682 | 321 | 119 | 3 | 3 | 321 | 1 | 319 | 6.34e-146 | 414 |
| MS.gene071502.t1 | MTR_7g112963 | 61.371 | 321 | 120 | 3 | 3 | 321 | 1 | 319 | 1.35e-145 | 413 |
| MS.gene071502.t1 | MTR_7g113050 | 60.125 | 321 | 124 | 3 | 3 | 321 | 1 | 319 | 2.62e-144 | 409 |
| MS.gene071502.t1 | MTR_7g112615 | 60.436 | 321 | 123 | 3 | 3 | 321 | 1 | 319 | 5.10e-144 | 409 |
| MS.gene071502.t1 | MTR_7g113030 | 59.813 | 321 | 125 | 3 | 3 | 321 | 1 | 319 | 1.81e-143 | 407 |
| MS.gene071502.t1 | MTR_7g112620 | 59.190 | 321 | 127 | 3 | 3 | 321 | 1 | 319 | 5.58e-141 | 401 |
| MS.gene071502.t1 | MTR_4g005160 | 56.481 | 324 | 134 | 4 | 3 | 321 | 1 | 322 | 7.06e-133 | 380 |
| MS.gene071502.t1 | MTR_7g113010 | 61.131 | 283 | 106 | 3 | 3 | 283 | 1 | 281 | 8.94e-124 | 367 |
| MS.gene071502.t1 | MTR_7g113050 | 61.667 | 240 | 88 | 3 | 3 | 240 | 1 | 238 | 9.58e-106 | 308 |
| MS.gene071502.t1 | MTR_8g076680 | 47.352 | 321 | 165 | 3 | 1 | 321 | 1 | 317 | 3.57e-105 | 310 |
| MS.gene071502.t1 | MTR_7g112615 | 61.250 | 240 | 89 | 3 | 3 | 240 | 1 | 238 | 2.68e-104 | 305 |
| MS.gene071502.t1 | MTR_7g108825 | 59.244 | 238 | 95 | 1 | 3 | 240 | 1 | 236 | 2.56e-102 | 300 |
| MS.gene071502.t1 | MTR_8g076680 | 49.167 | 240 | 120 | 1 | 1 | 240 | 1 | 238 | 3.87e-81 | 246 |
| MS.gene071502.t1 | MTR_7g112615 | 63.529 | 170 | 58 | 3 | 3 | 170 | 1 | 168 | 7.80e-73 | 223 |
| MS.gene071502.t1 | MTR_1g083480 | 60.625 | 160 | 58 | 2 | 3 | 159 | 1 | 158 | 1.16e-67 | 209 |
| MS.gene071502.t1 | MTR_2g090245 | 36.025 | 322 | 190 | 9 | 3 | 320 | 1 | 310 | 4.21e-59 | 192 |
| MS.gene071502.t1 | MTR_2g090240 | 34.161 | 322 | 196 | 8 | 3 | 320 | 1 | 310 | 7.05e-59 | 192 |
| MS.gene071502.t1 | MTR_4g089060 | 34.675 | 323 | 192 | 9 | 3 | 320 | 1 | 309 | 3.56e-58 | 190 |
| MS.gene071502.t1 | MTR_4g089040 | 33.022 | 321 | 200 | 7 | 3 | 320 | 1 | 309 | 2.61e-56 | 185 |
| MS.gene071502.t1 | MTR_4g089060 | 32.286 | 350 | 191 | 10 | 3 | 320 | 1 | 336 | 4.78e-53 | 177 |
| MS.gene071502.t1 | MTR_7g112910 | 41.129 | 248 | 88 | 7 | 76 | 321 | 4 | 195 | 1.19e-50 | 167 |
| MS.gene071502.t1 | MTR_4g089060 | 35.745 | 235 | 138 | 6 | 3 | 233 | 1 | 226 | 2.24e-45 | 154 |
| MS.gene071502.t1 | MTR_3g024250 | 57.009 | 107 | 44 | 1 | 49 | 155 | 3 | 107 | 8.71e-36 | 126 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071502.t1 | AT4G02340 | 59.561 | 319 | 126 | 2 | 3 | 321 | 1 | 316 | 4.36e-149 | 422 |
| MS.gene071502.t1 | AT4G15960 | 58.951 | 324 | 128 | 1 | 3 | 321 | 51 | 374 | 6.67e-149 | 423 |
| MS.gene071502.t1 | AT3G05600 | 56.481 | 324 | 136 | 2 | 3 | 321 | 1 | 324 | 2.71e-140 | 400 |
| MS.gene071502.t1 | AT2G26740 | 57.632 | 321 | 131 | 3 | 6 | 321 | 1 | 321 | 9.38e-130 | 373 |
| MS.gene071502.t1 | AT2G26750 | 55.625 | 320 | 138 | 2 | 6 | 321 | 1 | 320 | 5.77e-127 | 365 |
| MS.gene071502.t1 | AT4G15955 | 54.321 | 324 | 114 | 4 | 7 | 321 | 6 | 304 | 9.80e-123 | 354 |
| MS.gene071502.t1 | AT3G05600 | 56.790 | 243 | 100 | 2 | 3 | 240 | 1 | 243 | 5.44e-100 | 294 |
| MS.gene071502.t1 | AT3G51000 | 45.938 | 320 | 166 | 5 | 5 | 321 | 4 | 319 | 8.64e-100 | 296 |
| MS.gene071502.t1 | AT4G15955 | 63.793 | 174 | 54 | 2 | 7 | 171 | 6 | 179 | 1.31e-79 | 240 |
| MS.gene071502.t1 | AT4G15955 | 63.636 | 165 | 51 | 2 | 7 | 162 | 6 | 170 | 3.84e-74 | 226 |
Find 0 sgRNAs with CRISPR-Local
Find 150 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CTAAATAGTTTTGAATTTTT+TGG | + | 32563:9125-9144 | MS.gene071502:intron | 15.0% |
| !!! | TTTTTTTACAGTAAAATCTA+TGG | + | 32563:9810-9829 | MS.gene071502:intron | 15.0% |
| !! | AACAATCAAATTTATCTCAT+TGG | - | 32563:9960-9979 | None:intergenic | 20.0% |
| !! | ATTTGATCAAGTAAATACTA+AGG | - | 32563:9104-9123 | None:intergenic | 20.0% |
| !! | TAATGAGTTAGTAAGAAATA+TGG | + | 32563:9908-9927 | MS.gene071502:intron | 20.0% |
| !! | TTTGATCAAGTAAATACTAA+GGG | - | 32563:9103-9122 | None:intergenic | 20.0% |
| !!! | AATTTTTTAATTGAGCAAAC+CGG | + | 32563:9284-9303 | MS.gene071502:intron | 20.0% |
| !!! | TTTACTTTGAAAATCATGAT+CGG | + | 32563:9343-9362 | MS.gene071502:intron | 20.0% |
| ! | AATATACACATAGCTGAAAA+GGG | + | 32563:8595-8614 | MS.gene071502:CDS | 25.0% |
| ! | ATGTACAAACCTTAAATCTA+AGG | - | 32563:9063-9082 | None:intergenic | 25.0% |
| ! | TGTACAAACCTTAAATCTAA+GGG | - | 32563:9062-9081 | None:intergenic | 25.0% |
| ! | TTTACAGTAAAATCTATGGA+GGG | + | 32563:9814-9833 | MS.gene071502:intron | 25.0% |
| !! | CAAAGATATATTGTTCTAAG+TGG | + | 32563:9442-9461 | MS.gene071502:intron | 25.0% |
| !! | TTTTACAGTAAAATCTATGG+AGG | + | 32563:9813-9832 | MS.gene071502:intron | 25.0% |
| !!! | TTTTTTCAGATGTCTACTTT+CGG | - | 32563:9257-9276 | None:intergenic | 25.0% |
| AACACTATAGGAGAATCATT+TGG | - | 32563:9615-9634 | None:intergenic | 30.0% | |
| AATAAAGGATACCTGAAATC+TGG | - | 32563:9016-9035 | None:intergenic | 30.0% | |
| ATTACCATAAACTGCTCTAA+GGG | - | 32563:8980-8999 | None:intergenic | 30.0% | |
| CAATATACACATAGCTGAAA+AGG | + | 32563:8594-8613 | MS.gene071502:CDS | 30.0% | |
| GTAAGTTTATCTTCAACTCT+AGG | + | 32563:9734-9753 | MS.gene071502:intron | 30.0% | |
| TCTGTCAATTGCAATATTAC+AGG | + | 32563:9470-9489 | MS.gene071502:intron | 30.0% | |
| TGTCTCTATCAATGTTTCAT+AGG | + | 32563:9999-10018 | MS.gene071502:intron | 30.0% | |
| ! | ATTCTTGTTGTAATAGCCAT+GGG | - | 32563:9641-9660 | None:intergenic | 30.0% |
| AGAGATTACATTCACAAAGG+TGG | + | 32563:10176-10195 | MS.gene071502:CDS | 35.0% | |
| AGGATGTGGTAGTAATTGAA+GGG | + | 32563:10225-10244 | MS.gene071502:CDS | 35.0% | |
| AGTTCCAGTGAAGTTTATAG+TGG | + | 32563:10118-10137 | MS.gene071502:CDS | 35.0% | |
| ATCTAAGGGAGCTTATCTAT+AGG | - | 32563:9048-9067 | None:intergenic | 35.0% | |
| CAAATGCAAGAGAAGCAATA+TGG | - | 32563:10053-10072 | None:intergenic | 35.0% | |
| CATTACCATAAACTGCTCTA+AGG | - | 32563:8981-9000 | None:intergenic | 35.0% | |
| CTACTATATCTCCAGATTTC+AGG | + | 32563:9002-9021 | MS.gene071502:CDS | 35.0% | |
| CTCTTGCATTTGTAGAAACT+GGG | + | 32563:10061-10080 | MS.gene071502:intron | 35.0% | |
| CTTTATCTACCTAAGGGTAA+AGG | + | 32563:9579-9598 | MS.gene071502:CDS | 35.0% | |
| GAGATTACATTCACAAAGGT+GGG | + | 32563:10177-10196 | MS.gene071502:CDS | 35.0% | |
| GATAAGCTCCCTTAGATTTA+AGG | + | 32563:9051-9070 | MS.gene071502:intron | 35.0% | |
| GATAAGTCAGAAATTCCTTC+AGG | - | 32563:9545-9564 | None:intergenic | 35.0% | |
| GCAAGAGATTACATTCACAA+AGG | + | 32563:10173-10192 | MS.gene071502:CDS | 35.0% | |
| GTGTATATTGATGCCATTGA+CGG | - | 32563:8584-8603 | None:intergenic | 35.0% | |
| GTTCCAGTGAAGTTTATAGT+GGG | + | 32563:10119-10138 | MS.gene071502:CDS | 35.0% | |
| TCTAAGGGAGCTTATCTATA+GGG | - | 32563:9047-9066 | None:intergenic | 35.0% | |
| TCTCTTGCATTTGTAGAAAC+TGG | + | 32563:10060-10079 | MS.gene071502:intron | 35.0% | |
| TTACCCTTAGGTAGATAAAG+TGG | - | 32563:9579-9598 | None:intergenic | 35.0% | |
| ! | CATTCTTGTTGTAATAGCCA+TGG | - | 32563:9642-9661 | None:intergenic | 35.0% |
| ! | GTATCAAGAGGCTTTCTTTT+GGG | - | 32563:8958-8977 | None:intergenic | 35.0% |
| ! | TATCAAGAGGCTTTCTTTTG+GGG | - | 32563:8957-8976 | None:intergenic | 35.0% |
| ! | TCCAGTCTTGTCAAATTTAG+AGG | - | 32563:9676-9695 | None:intergenic | 35.0% |
| ! | TGATCGGAATTTTCGAAATG+TGG | + | 32563:9359-9378 | MS.gene071502:intron | 35.0% |
| ! | TTCTTGTTGTAATAGCCATG+GGG | - | 32563:9640-9659 | None:intergenic | 35.0% |
| !! | CATATCGTTGGTGATATCAT+CGG | + | 32563:8784-8803 | MS.gene071502:CDS | 35.0% |
| !!! | GTGGATTGGTGTAGTTATTT+TGG | + | 32563:9415-9434 | MS.gene071502:intron | 35.0% |
| AACTCTGCTTCTATATCACC+AGG | - | 32563:9498-9517 | None:intergenic | 40.0% | |
| AAGCTAGATATGTGATCTGG+TGG | - | 32563:8678-8697 | None:intergenic | 40.0% | |
| ACAAGAGCCTTGATTCTTTC+AGG | - | 32563:8904-8923 | None:intergenic | 40.0% | |
| AGCTTATCTATAGGGACTGA+GGG | - | 32563:9039-9058 | None:intergenic | 40.0% | |
| ATTGCAATATTACAGGAGCC+TGG | + | 32563:9477-9496 | MS.gene071502:intron | 40.0% | |
| CAAGAGCCTTGATTCTTTCA+GGG | - | 32563:8903-8922 | None:intergenic | 40.0% | |
| CAATCCACAAAAACTCAGCA+TGG | - | 32563:9403-9422 | None:intergenic | 40.0% | |
| CATGTTTGATCAGTAAGTGC+CGG | - | 32563:9306-9325 | None:intergenic | 40.0% | |
| CGATGATATCACCAACGATA+TGG | - | 32563:8786-8805 | None:intergenic | 40.0% | |
| GAGGATGTGGTAGTAATTGA+AGG | + | 32563:10224-10243 | MS.gene071502:CDS | 40.0% | |
| GATACCCTTAGAGCAGTTTA+TGG | + | 32563:8973-8992 | MS.gene071502:CDS | 40.0% | |
| GCACTTCATCCATCAAGAAA+GGG | + | 32563:10253-10272 | MS.gene071502:CDS | 40.0% | |
| GCCTCTAAATTTGACAAGAC+TGG | + | 32563:9672-9691 | MS.gene071502:CDS | 40.0% | |
| GGAAAGATACCAAGCAGTAA+GGG | - | 32563:8872-8891 | None:intergenic | 40.0% | |
| GGATGTGGTAGTAATTGAAG+GGG | + | 32563:10226-10245 | MS.gene071502:CDS | 40.0% | |
| GGTCCACTTTATCTACCTAA+GGG | + | 32563:9573-9592 | MS.gene071502:CDS | 40.0% | |
| TAGGTAGATAAAGTGGACCA+GGG | - | 32563:9572-9591 | None:intergenic | 40.0% | |
| TATAGGGACTGAGGGAATAA+AGG | - | 32563:9031-9050 | None:intergenic | 40.0% | |
| TCACCCACTATAAACTTCAC+TGG | - | 32563:10125-10144 | None:intergenic | 40.0% | |
| TCTTATCAGCCCTTTCTTGA+TGG | - | 32563:10265-10284 | None:intergenic | 40.0% | |
| TGATATCACCAACGATATGG+AGG | - | 32563:8783-8802 | None:intergenic | 40.0% | |
| TGCCATTGACGGTTACAATT+CGG | - | 32563:8573-8592 | None:intergenic | 40.0% | |
| TGGTCCACTTTATCTACCTA+AGG | + | 32563:9572-9591 | MS.gene071502:CDS | 40.0% | |
| TGTCCAAAACCTTTACCCTT+AGG | - | 32563:9591-9610 | None:intergenic | 40.0% | |
| TTAGGTAGATAAAGTGGACC+AGG | - | 32563:9573-9592 | None:intergenic | 40.0% | |
| TTGACAAGACTGGATTCACA+GGG | + | 32563:9682-9701 | MS.gene071502:CDS | 40.0% | |
| TTTGACAAGACTGGATTCAC+AGG | + | 32563:9681-9700 | MS.gene071502:CDS | 40.0% | |
| ! | ATCACATATCTAGCTTGCCA+TGG | + | 32563:8682-8701 | MS.gene071502:CDS | 40.0% |
| ! | CAATCCATGCTGAGTTTTTG+TGG | + | 32563:9396-9415 | MS.gene071502:intron | 40.0% |
| ! | CATGCTGAGTTTTTGTGGAT+TGG | + | 32563:9401-9420 | MS.gene071502:intron | 40.0% |
| ! | CTACCTAAGGGTAAAGGTTT+TGG | + | 32563:9585-9604 | MS.gene071502:CDS | 40.0% |
| ! | GGAATTTTCGAAATGTGGAG+TGG | + | 32563:9364-9383 | MS.gene071502:intron | 40.0% |
| ! | GGTATCAAGAGGCTTTCTTT+TGG | - | 32563:8959-8978 | None:intergenic | 40.0% |
| ! | TCTTGTTGTAATAGCCATGG+GGG | - | 32563:9639-9658 | None:intergenic | 40.0% |
| !! | CAAGAGAAGGTGTTTGTTGT+GGG | + | 32563:8832-8851 | MS.gene071502:CDS | 40.0% |
| !! | TCAAGAGAAGGTGTTTGTTG+TGG | + | 32563:8831-8850 | MS.gene071502:CDS | 40.0% |
| CACATAGCTGAAAAGGGTCA+AGG | + | 32563:8601-8620 | MS.gene071502:CDS | 45.0% | |
| CACCGAATTGTAACCGTCAA+TGG | + | 32563:8568-8587 | MS.gene071502:CDS | 45.0% | |
| CATTGCTGGTGATCAAGAGA+AGG | + | 32563:8819-8838 | MS.gene071502:CDS | 45.0% | |
| CGGCACTTACTGATCAAACA+TGG | + | 32563:9304-9323 | MS.gene071502:intron | 45.0% | |
| CTATCGCCCTGAAAGAATCA+AGG | + | 32563:8894-8913 | MS.gene071502:CDS | 45.0% | |
| CTTCTCTTGATCACCAGCAA+TGG | - | 32563:8821-8840 | None:intergenic | 45.0% | |
| GACCTTACCTATAATGCACC+TGG | + | 32563:10149-10168 | MS.gene071502:CDS | 45.0% | |
| GAGCTTATCTATAGGGACTG+AGG | - | 32563:9040-9059 | None:intergenic | 45.0% | |
| GATTCTTTCAGGGCGATAGA+GGG | - | 32563:8893-8912 | None:intergenic | 45.0% | |
| GCCATGAATACCATAGGTCA+GGG | - | 32563:8654-8673 | None:intergenic | 45.0% | |
| GGCAAGCTAGATATGTGATC+TGG | - | 32563:8681-8700 | None:intergenic | 45.0% | |
| GGCACTTCATCCATCAAGAA+AGG | + | 32563:10252-10271 | MS.gene071502:CDS | 45.0% | |
| GGGAAAGATACCAAGCAGTA+AGG | - | 32563:8873-8892 | None:intergenic | 45.0% | |
| TCCCTGACCTATGGTATTCA+TGG | + | 32563:8650-8669 | MS.gene071502:CDS | 45.0% | |
| TGAATGTAATCTCTTGCGCC+AGG | - | 32563:10170-10189 | None:intergenic | 45.0% | |
| TGACAAGACTGGATTCACAG+GGG | + | 32563:9683-9702 | MS.gene071502:CDS | 45.0% | |
| TGATTCTTTCAGGGCGATAG+AGG | - | 32563:8894-8913 | None:intergenic | 45.0% | |
| TGGAACTGAAAGAGTCCTGA+AGG | + | 32563:9527-9546 | MS.gene071502:CDS | 45.0% | |
| TGGTAGTAATTGAAGGGGCA+GGG | + | 32563:10231-10250 | MS.gene071502:CDS | 45.0% | |
| TTTCTGACTTATCGCAACCC+TGG | + | 32563:9552-9571 | MS.gene071502:CDS | 45.0% | |
| ! | TTTGTTGTGGGCCATGATTG+GGG | + | 32563:8844-8863 | MS.gene071502:CDS | 45.0% |
| !! | ACTGCTCTAAGGGTATCAAG+AGG | - | 32563:8970-8989 | None:intergenic | 45.0% |
| !! | GAAGCAGAGTTTGCTGAGAT+TGG | + | 32563:9507-9526 | MS.gene071502:CDS | 45.0% |
| !! | GTTTGTTGTGGGCCATGATT+GGG | + | 32563:8843-8862 | MS.gene071502:CDS | 45.0% |
| !! | TGTTTGTTGTGGGCCATGAT+TGG | + | 32563:8842-8861 | MS.gene071502:CDS | 45.0% |
| !!! | GGCTTTCTTTTGGGGTTTCT+AGG | - | 32563:8949-8968 | None:intergenic | 45.0% |
| AACGATATGGAGGCTCGTGT+AGG | - | 32563:8773-8792 | None:intergenic | 50.0% | |
| ACTACCACATCCTCCAGAAG+TGG | - | 32563:10218-10237 | None:intergenic | 50.0% | |
| AGCCATGGATGAAGAGGATG+AGG | - | 32563:8630-8649 | None:intergenic | 50.0% | |
| CCATGGATGAAGAGGATGAG+GGG | - | 32563:8628-8647 | None:intergenic | 50.0% | |
| CGCCAGGTGCATTATAGGTA+AGG | - | 32563:10154-10173 | None:intergenic | 50.0% | |
| CGCCATGAATACCATAGGTC+AGG | - | 32563:8655-8674 | None:intergenic | 50.0% | |
| GCCATGGATGAAGAGGATGA+GGG | - | 32563:8629-8648 | None:intergenic | 50.0% | |
| GTGGTAGTAATTGAAGGGGC+AGG | + | 32563:10230-10249 | MS.gene071502:CDS | 50.0% | |
| TACACGAGCCTCCATATCGT+TGG | + | 32563:8772-8791 | MS.gene071502:CDS | 50.0% | |
| TATCAGTGTCTCCGTATCCG+CGG | - | 32563:8732-8751 | None:intergenic | 50.0% | |
| TCTTGCGCCAGGTGCATTAT+AGG | - | 32563:10159-10178 | None:intergenic | 50.0% | |
| TTGCCATGGTTACCGTTGTG+TGG | + | 32563:8696-8715 | MS.gene071502:CDS | 50.0% | |
| ! | TTGACTTGAGCACCAGTCCA+TGG | - | 32563:10098-10117 | None:intergenic | 50.0% |
| !! | GAAGAGAGATGTGCCACTTC+TGG | + | 32563:10202-10221 | MS.gene071502:CDS | 50.0% |
| ACCATAGGTCAGGGAAGCCA+TGG | - | 32563:8645-8664 | None:intergenic | 55.0% | |
| ACTGGGAGCTCAATGCTCCA+TGG | + | 32563:10078-10097 | MS.gene071502:CDS | 55.0% | |
| AGCCATGGGGGCAACACTAT+AGG | - | 32563:9627-9646 | None:intergenic | 55.0% | |
| CAGGGAAGCCATGGATGAAG+AGG | - | 32563:8636-8655 | None:intergenic | 55.0% | |
| CCCCTCATCCTCTTCATCCA+TGG | + | 32563:8625-8644 | MS.gene071502:CDS | 55.0% | |
| CTCCTATAGTGTTGCCCCCA+TGG | + | 32563:9622-9641 | MS.gene071502:CDS | 55.0% | |
| GAGCTCAATGCTCCATGGAC+TGG | + | 32563:10083-10102 | MS.gene071502:CDS | 55.0% | |
| GGACTTCTTGACGCCATTGC+TGG | + | 32563:8805-8824 | MS.gene071502:CDS | 55.0% | |
| GGTGGCGCCATGAATACCAT+AGG | - | 32563:8660-8679 | None:intergenic | 55.0% | |
| TCCATGGCTTCCCTGACCTA+TGG | + | 32563:8641-8660 | MS.gene071502:CDS | 55.0% | |
| TGGAGGCTCGTGTAGGATGT+CGG | - | 32563:8766-8785 | None:intergenic | 55.0% | |
| ! | ATTGGGGTGCCCTTACTGCT+TGG | + | 32563:8860-8879 | MS.gene071502:CDS | 55.0% |
| !! | CAGTAAGGGCACCCCAATCA+TGG | - | 32563:8858-8877 | None:intergenic | 55.0% |
| !! | GAGAGATGTGCCACTTCTGG+AGG | + | 32563:10205-10224 | MS.gene071502:CDS | 55.0% |
| !! | TGTGCCACTTCTGGAGGATG+TGG | + | 32563:10211-10230 | MS.gene071502:CDS | 55.0% |
| GCTCGTGTAGGATGTCGGTG+AGG | - | 32563:8761-8780 | None:intergenic | 60.0% | |
| GGGCCACACAACGGTAACCA+TGG | - | 32563:8702-8721 | None:intergenic | 60.0% | |
| GTGTAGGATGTCGGTGAGGC+TGG | - | 32563:8757-8776 | None:intergenic | 60.0% | |
| TCTCCGTATCCGCGGAGATC+CGG | - | 32563:8724-8743 | None:intergenic | 60.0% | |
| TGGTTACCGTTGTGTGGCCC+CGG | + | 32563:8702-8721 | MS.gene071502:CDS | 60.0% | |
| CTCCGTATCCGCGGAGATCC+GGG | - | 32563:8723-8742 | None:intergenic | 65.0% | |
| GGAGATCCGGGGCCACACAA+CGG | - | 32563:8711-8730 | None:intergenic | 65.0% | |
| TCCGTATCCGCGGAGATCCG+GGG | - | 32563:8722-8741 | None:intergenic | 65.0% | |
| GCCCCGGATCTCCGCGGATA+CGG | + | 32563:8718-8737 | MS.gene071502:CDS | 70.0% | |
| TGTGTGGCCCCGGATCTCCG+CGG | + | 32563:8712-8731 | MS.gene071502:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 32563 | gene | 8547 | 10322 | 8547 | ID=MS.gene071502 |
| 32563 | mRNA | 8547 | 10322 | 8547 | ID=MS.gene071502.t1;Parent=MS.gene071502 |
| 32563 | exon | 8547 | 9023 | 8547 | ID=MS.gene071502.t1.exon1;Parent=MS.gene071502.t1 |
| 32563 | CDS | 8547 | 9023 | 8547 | ID=cds.MS.gene071502.t1;Parent=MS.gene071502.t1 |
| 32563 | exon | 9492 | 9733 | 9492 | ID=MS.gene071502.t1.exon2;Parent=MS.gene071502.t1 |
| 32563 | CDS | 9492 | 9733 | 9492 | ID=cds.MS.gene071502.t1;Parent=MS.gene071502.t1 |
| 32563 | exon | 10076 | 10322 | 10076 | ID=MS.gene071502.t1.exon3;Parent=MS.gene071502.t1 |
| 32563 | CDS | 10076 | 10322 | 10076 | ID=cds.MS.gene071502.t1;Parent=MS.gene071502.t1 |
| Gene Sequence |
| Protein sequence |
