Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77823.t1 | KEH32298.1 | 96.3 | 321 | 12 | 0 | 1 | 321 | 35 | 355 | 2.70E-189 | 671 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77823.t1 | I6YGS0 | 36.2 | 320 | 182 | 7 | 9 | 317 | 7 | 315 | 4.9e-54 | 213.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77823.t1 | A0A072UTA2 | 96.3 | 321 | 12 | 0 | 1 | 321 | 35 | 355 | 2.0e-189 | 671.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77823.t1 | MTR_4g120240 | 96.262 | 321 | 12 | 0 | 1 | 321 | 35 | 355 | 0.0 | 648 |
| MS.gene77823.t1 | MTR_7g108825 | 61.129 | 319 | 122 | 1 | 3 | 321 | 1 | 317 | 4.91e-148 | 419 |
| MS.gene77823.t1 | MTR_7g112970 | 61.250 | 320 | 119 | 3 | 3 | 321 | 1 | 316 | 6.87e-148 | 419 |
| MS.gene77823.t1 | MTR_7g113020 | 61.994 | 321 | 118 | 3 | 3 | 321 | 1 | 319 | 3.84e-146 | 414 |
| MS.gene77823.t1 | MTR_7g112960 | 61.682 | 321 | 119 | 3 | 3 | 321 | 1 | 319 | 1.05e-145 | 413 |
| MS.gene77823.t1 | MTR_7g112963 | 61.371 | 321 | 120 | 3 | 3 | 321 | 1 | 319 | 2.36e-145 | 412 |
| MS.gene77823.t1 | MTR_7g113050 | 60.125 | 321 | 124 | 3 | 3 | 321 | 1 | 319 | 4.52e-144 | 409 |
| MS.gene77823.t1 | MTR_7g112615 | 60.436 | 321 | 123 | 3 | 3 | 321 | 1 | 319 | 8.52e-144 | 408 |
| MS.gene77823.t1 | MTR_7g113030 | 59.813 | 321 | 125 | 3 | 3 | 321 | 1 | 319 | 2.84e-143 | 407 |
| MS.gene77823.t1 | MTR_7g112620 | 59.190 | 321 | 127 | 3 | 3 | 321 | 1 | 319 | 1.09e-140 | 400 |
| MS.gene77823.t1 | MTR_4g005160 | 56.790 | 324 | 133 | 4 | 3 | 321 | 1 | 322 | 1.56e-133 | 382 |
| MS.gene77823.t1 | MTR_7g113010 | 61.131 | 283 | 106 | 3 | 3 | 283 | 1 | 281 | 1.71e-123 | 366 |
| MS.gene77823.t1 | MTR_7g113050 | 61.667 | 240 | 88 | 3 | 3 | 240 | 1 | 238 | 1.67e-105 | 308 |
| MS.gene77823.t1 | MTR_8g076680 | 47.352 | 321 | 165 | 3 | 1 | 321 | 1 | 317 | 2.26e-105 | 311 |
| MS.gene77823.t1 | MTR_7g112615 | 61.250 | 240 | 89 | 3 | 3 | 240 | 1 | 238 | 3.75e-104 | 305 |
| MS.gene77823.t1 | MTR_7g108825 | 59.244 | 238 | 95 | 1 | 3 | 240 | 1 | 236 | 4.13e-102 | 299 |
| MS.gene77823.t1 | MTR_8g076680 | 49.167 | 240 | 120 | 1 | 1 | 240 | 1 | 238 | 2.98e-81 | 246 |
| MS.gene77823.t1 | MTR_7g112615 | 63.529 | 170 | 58 | 3 | 3 | 170 | 1 | 168 | 6.55e-73 | 223 |
| MS.gene77823.t1 | MTR_1g083480 | 60.625 | 160 | 58 | 2 | 3 | 159 | 1 | 158 | 9.53e-68 | 210 |
| MS.gene77823.t1 | MTR_2g090245 | 36.025 | 322 | 190 | 9 | 3 | 320 | 1 | 310 | 6.19e-59 | 192 |
| MS.gene77823.t1 | MTR_2g090240 | 34.161 | 322 | 196 | 8 | 3 | 320 | 1 | 310 | 1.00e-58 | 191 |
| MS.gene77823.t1 | MTR_4g089060 | 34.675 | 323 | 192 | 9 | 3 | 320 | 1 | 309 | 6.16e-58 | 189 |
| MS.gene77823.t1 | MTR_4g089040 | 33.022 | 321 | 200 | 7 | 3 | 320 | 1 | 309 | 4.18e-56 | 184 |
| MS.gene77823.t1 | MTR_4g089060 | 32.286 | 350 | 191 | 10 | 3 | 320 | 1 | 336 | 7.09e-53 | 177 |
| MS.gene77823.t1 | MTR_7g112910 | 40.726 | 248 | 89 | 7 | 76 | 321 | 4 | 195 | 4.52e-50 | 165 |
| MS.gene77823.t1 | MTR_4g089060 | 35.745 | 235 | 138 | 6 | 3 | 233 | 1 | 226 | 3.44e-45 | 154 |
| MS.gene77823.t1 | MTR_3g024250 | 57.009 | 107 | 44 | 1 | 49 | 155 | 3 | 107 | 7.75e-36 | 126 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77823.t1 | AT4G02340 | 59.561 | 319 | 126 | 2 | 3 | 321 | 1 | 316 | 2.73e-149 | 422 |
| MS.gene77823.t1 | AT4G15960 | 58.951 | 324 | 128 | 1 | 3 | 321 | 51 | 374 | 1.39e-148 | 422 |
| MS.gene77823.t1 | AT3G05600 | 56.481 | 324 | 136 | 2 | 3 | 321 | 1 | 324 | 4.34e-140 | 399 |
| MS.gene77823.t1 | AT2G26740 | 57.632 | 321 | 131 | 3 | 6 | 321 | 1 | 321 | 1.10e-129 | 372 |
| MS.gene77823.t1 | AT2G26750 | 55.625 | 320 | 138 | 2 | 6 | 321 | 1 | 320 | 3.65e-127 | 366 |
| MS.gene77823.t1 | AT4G15955 | 54.321 | 324 | 114 | 4 | 7 | 321 | 6 | 304 | 1.26e-122 | 354 |
| MS.gene77823.t1 | AT3G51000 | 45.938 | 320 | 166 | 5 | 5 | 321 | 4 | 319 | 5.01e-100 | 297 |
| MS.gene77823.t1 | AT3G05600 | 56.790 | 243 | 100 | 2 | 3 | 240 | 1 | 243 | 9.59e-100 | 294 |
| MS.gene77823.t1 | AT4G15955 | 63.793 | 174 | 54 | 2 | 7 | 171 | 6 | 179 | 1.03e-79 | 241 |
| MS.gene77823.t1 | AT4G15955 | 63.636 | 165 | 51 | 2 | 7 | 162 | 6 | 170 | 3.13e-74 | 226 |
Find 0 sgRNAs with CRISPR-Local
Find 150 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATCAAATTTATCTCAT+TGG | - | 32566:7699-7718 | None:intergenic | 15.0% |
| !!! | CTAAATAGTTTTGAATTTTT+TGG | + | 32566:6865-6884 | MS.gene77823:intron | 15.0% |
| !!! | TTTTTTTACAGTAAAATCTA+TGG | + | 32566:7549-7568 | MS.gene77823:intron | 15.0% |
| !! | ATTTGATCAAGTAAATACTA+AGG | - | 32566:6844-6863 | None:intergenic | 20.0% |
| !! | TAATGAGTTAGTAAGAAATA+TGG | + | 32566:7647-7666 | MS.gene77823:intron | 20.0% |
| !! | TTTGATCAAGTAAATACTAA+GGG | - | 32566:6843-6862 | None:intergenic | 20.0% |
| !!! | AATTTTTTAATTGAGCAAAC+CGG | + | 32566:7024-7043 | MS.gene77823:intron | 20.0% |
| ! | AATATACACATAGCTGAAAA+GGG | + | 32566:6335-6354 | MS.gene77823:CDS | 25.0% |
| ! | ATGTACAAACCTTAAATCTA+AGG | - | 32566:6803-6822 | None:intergenic | 25.0% |
| ! | TGTACAAACCTTAAATCTAA+GGG | - | 32566:6802-6821 | None:intergenic | 25.0% |
| ! | TTTACAGTAAAATCTATGGA+GGG | + | 32566:7553-7572 | MS.gene77823:intron | 25.0% |
| !! | CAAAGATATATTGTTCTAAG+TGG | + | 32566:7181-7200 | MS.gene77823:intron | 25.0% |
| !! | TTTTACAGTAAAATCTATGG+AGG | + | 32566:7552-7571 | MS.gene77823:intron | 25.0% |
| !!! | TTTTTTCAGATGTCTACTTT+CGG | - | 32566:6997-7016 | None:intergenic | 25.0% |
| AACACTATAGGAGAATCATT+TGG | - | 32566:7354-7373 | None:intergenic | 30.0% | |
| AATAAAGGATACCTGAAATC+TGG | - | 32566:6756-6775 | None:intergenic | 30.0% | |
| ATTACCATAAACTGCTCTAA+GGG | - | 32566:6720-6739 | None:intergenic | 30.0% | |
| CAATATACACATAGCTGAAA+AGG | + | 32566:6334-6353 | MS.gene77823:CDS | 30.0% | |
| GTAAGTTTATCTTCAACTCT+AGG | + | 32566:7473-7492 | MS.gene77823:intron | 30.0% | |
| TCTGTCAATTGCAATATTAC+AGG | + | 32566:7209-7228 | MS.gene77823:intron | 30.0% | |
| TGTCTCTATCAATGTTTCAT+AGG | + | 32566:7739-7758 | MS.gene77823:intron | 30.0% | |
| ! | ATGATCGAATTTTCGAAATG+TGG | + | 32566:7098-7117 | MS.gene77823:intron | 30.0% |
| !! | TCCAGTCTTGTTAAATTTAG+AGG | - | 32566:7415-7434 | None:intergenic | 30.0% |
| AGAGATTACATTCACAAAGG+TGG | + | 32566:7916-7935 | MS.gene77823:CDS | 35.0% | |
| AGTTCCAGTGAAGTTTATAG+TGG | + | 32566:7858-7877 | MS.gene77823:CDS | 35.0% | |
| ATCTAAGGGAGCTTATCTAT+AGG | - | 32566:6788-6807 | None:intergenic | 35.0% | |
| ATTCTTGTTGCAATAGCCAT+GGG | - | 32566:7380-7399 | None:intergenic | 35.0% | |
| CAAATGCAAGAGAAGCAATA+TGG | - | 32566:7793-7812 | None:intergenic | 35.0% | |
| CATTACCATAAACTGCTCTA+AGG | - | 32566:6721-6740 | None:intergenic | 35.0% | |
| CTACTATATCTCCAGATTTC+AGG | + | 32566:6742-6761 | MS.gene77823:CDS | 35.0% | |
| CTCTTGCATTTGTAGAAACT+GGG | + | 32566:7801-7820 | MS.gene77823:intron | 35.0% | |
| CTTTATCTACCTAAGGGTAA+AGG | + | 32566:7318-7337 | MS.gene77823:CDS | 35.0% | |
| GAGATTACATTCACAAAGGT+GGG | + | 32566:7917-7936 | MS.gene77823:CDS | 35.0% | |
| GATAAGCTCCCTTAGATTTA+AGG | + | 32566:6791-6810 | MS.gene77823:intron | 35.0% | |
| GCAAGAGATTACATTCACAA+AGG | + | 32566:7913-7932 | MS.gene77823:CDS | 35.0% | |
| GCCTCTAAATTTAACAAGAC+TGG | + | 32566:7411-7430 | MS.gene77823:CDS | 35.0% | |
| GTGTATATTGATGCCATTGA+CGG | - | 32566:6324-6343 | None:intergenic | 35.0% | |
| GTTCCAGTGAAGTTTATAGT+GGG | + | 32566:7859-7878 | MS.gene77823:CDS | 35.0% | |
| TCTAAGGGAGCTTATCTATA+GGG | - | 32566:6787-6806 | None:intergenic | 35.0% | |
| TCTCTTGCATTTGTAGAAAC+TGG | + | 32566:7800-7819 | MS.gene77823:intron | 35.0% | |
| TTAACAAGACTGGATTCACA+GGG | + | 32566:7421-7440 | MS.gene77823:CDS | 35.0% | |
| TTACCCTTAGGTAGATAAAG+TGG | - | 32566:7318-7337 | None:intergenic | 35.0% | |
| TTTAACAAGACTGGATTCAC+AGG | + | 32566:7420-7439 | MS.gene77823:CDS | 35.0% | |
| ! | GTATCAAGAGGCTTTCTTTT+GGG | - | 32566:6698-6717 | None:intergenic | 35.0% |
| ! | TATCAAGAGGCTTTCTTTTG+GGG | - | 32566:6697-6716 | None:intergenic | 35.0% |
| !! | CATATCGTTGGTGATATCAT+CGG | + | 32566:6524-6543 | MS.gene77823:CDS | 35.0% |
| !!! | GTGGATTGGTGTAGTTATTT+TGG | + | 32566:7154-7173 | MS.gene77823:intron | 35.0% |
| AACTCTGCTTCTATATCACC+AGG | - | 32566:7237-7256 | None:intergenic | 40.0% | |
| AAGCTAGATATGTGATCTGG+TGG | - | 32566:6418-6437 | None:intergenic | 40.0% | |
| ACAAGAGCCTTGATTCTTTC+AGG | - | 32566:6644-6663 | None:intergenic | 40.0% | |
| AGCTTATCTATAGGGACTGA+GGG | - | 32566:6779-6798 | None:intergenic | 40.0% | |
| AGGATGTGGTAGTAATCGAA+GGG | + | 32566:7965-7984 | MS.gene77823:CDS | 40.0% | |
| ATTGCAATATTACAGGAGCC+TGG | + | 32566:7216-7235 | MS.gene77823:intron | 40.0% | |
| CAAGAGCCTTGATTCTTTCA+GGG | - | 32566:6643-6662 | None:intergenic | 40.0% | |
| CAATCCACAAAAACTCAGCA+TGG | - | 32566:7142-7161 | None:intergenic | 40.0% | |
| CATGTTTGATCAGTAAGTGC+CGG | - | 32566:7046-7065 | None:intergenic | 40.0% | |
| CATTCTTGTTGCAATAGCCA+TGG | - | 32566:7381-7400 | None:intergenic | 40.0% | |
| CGATGATATCACCAACGATA+TGG | - | 32566:6526-6545 | None:intergenic | 40.0% | |
| GATACCCTTAGAGCAGTTTA+TGG | + | 32566:6713-6732 | MS.gene77823:CDS | 40.0% | |
| GCACTTCATCCATCAAGAAA+GGG | + | 32566:7993-8012 | MS.gene77823:CDS | 40.0% | |
| GGAAAGATACCAAGCAGTAA+GGG | - | 32566:6612-6631 | None:intergenic | 40.0% | |
| GGTAAGTCAGAAATTCCTTC+AGG | - | 32566:7284-7303 | None:intergenic | 40.0% | |
| GGTCCACTTTATCTACCTAA+GGG | + | 32566:7312-7331 | MS.gene77823:CDS | 40.0% | |
| TAACAAGACTGGATTCACAG+GGG | + | 32566:7422-7441 | MS.gene77823:CDS | 40.0% | |
| TAGGTAGATAAAGTGGACCA+GGG | - | 32566:7311-7330 | None:intergenic | 40.0% | |
| TATAGGGACTGAGGGAATAA+AGG | - | 32566:6771-6790 | None:intergenic | 40.0% | |
| TCACCCACTATAAACTTCAC+TGG | - | 32566:7865-7884 | None:intergenic | 40.0% | |
| TCTTATCAGCCCTTTCTTGA+TGG | - | 32566:8005-8024 | None:intergenic | 40.0% | |
| TGATATCACCAACGATATGG+AGG | - | 32566:6523-6542 | None:intergenic | 40.0% | |
| TGCCATTGACGGTTACAATT+CGG | - | 32566:6313-6332 | None:intergenic | 40.0% | |
| TGGTCCACTTTATCTACCTA+AGG | + | 32566:7311-7330 | MS.gene77823:CDS | 40.0% | |
| TGTCCAAAACCTTTACCCTT+AGG | - | 32566:7330-7349 | None:intergenic | 40.0% | |
| TTAGGTAGATAAAGTGGACC+AGG | - | 32566:7312-7331 | None:intergenic | 40.0% | |
| TTCTTGTTGCAATAGCCATG+GGG | - | 32566:7379-7398 | None:intergenic | 40.0% | |
| ! | ATCACATATCTAGCTTGCCA+TGG | + | 32566:6422-6441 | MS.gene77823:CDS | 40.0% |
| ! | CAATCCATGCTGAGTTTTTG+TGG | + | 32566:7135-7154 | MS.gene77823:intron | 40.0% |
| ! | CATGCTGAGTTTTTGTGGAT+TGG | + | 32566:7140-7159 | MS.gene77823:intron | 40.0% |
| ! | CGAATTTTCGAAATGTGGAG+TGG | + | 32566:7103-7122 | MS.gene77823:intron | 40.0% |
| ! | CTACCTAAGGGTAAAGGTTT+TGG | + | 32566:7324-7343 | MS.gene77823:CDS | 40.0% |
| ! | GGTATCAAGAGGCTTTCTTT+TGG | - | 32566:6699-6718 | None:intergenic | 40.0% |
| !! | CAAGAGAAGGTGTTTGTTGT+GGG | + | 32566:6572-6591 | MS.gene77823:CDS | 40.0% |
| !! | TCAAGAGAAGGTGTTTGTTG+TGG | + | 32566:6571-6590 | MS.gene77823:CDS | 40.0% |
| CACATAGCTGAAAAGGGTCA+AGG | + | 32566:6341-6360 | MS.gene77823:CDS | 45.0% | |
| CACCGAATTGTAACCGTCAA+TGG | + | 32566:6308-6327 | MS.gene77823:CDS | 45.0% | |
| CATTGCTGGTGATCAAGAGA+AGG | + | 32566:6559-6578 | MS.gene77823:CDS | 45.0% | |
| CGGCACTTACTGATCAAACA+TGG | + | 32566:7044-7063 | MS.gene77823:intron | 45.0% | |
| CTATCGCCCTGAAAGAATCA+AGG | + | 32566:6634-6653 | MS.gene77823:CDS | 45.0% | |
| CTTCTCTTGATCACCAGCAA+TGG | - | 32566:6561-6580 | None:intergenic | 45.0% | |
| GACCTTACCTATAATGCACC+TGG | + | 32566:7889-7908 | MS.gene77823:CDS | 45.0% | |
| GAGCTTATCTATAGGGACTG+AGG | - | 32566:6780-6799 | None:intergenic | 45.0% | |
| GAGGATGTGGTAGTAATCGA+AGG | + | 32566:7964-7983 | MS.gene77823:CDS | 45.0% | |
| GATTCTTTCAGGGCGATAGA+GGG | - | 32566:6633-6652 | None:intergenic | 45.0% | |
| GCCATGAATACCATAGGTCA+GGG | - | 32566:6394-6413 | None:intergenic | 45.0% | |
| GGATGTGGTAGTAATCGAAG+GGG | + | 32566:7966-7985 | MS.gene77823:CDS | 45.0% | |
| GGCAAGCTAGATATGTGATC+TGG | - | 32566:6421-6440 | None:intergenic | 45.0% | |
| GGCACTTCATCCATCAAGAA+AGG | + | 32566:7992-8011 | MS.gene77823:CDS | 45.0% | |
| GGGAAAGATACCAAGCAGTA+AGG | - | 32566:6613-6632 | None:intergenic | 45.0% | |
| TCCCTGACCTATGGTATTCA+TGG | + | 32566:6390-6409 | MS.gene77823:CDS | 45.0% | |
| TCTTGTTGCAATAGCCATGG+GGG | - | 32566:7378-7397 | None:intergenic | 45.0% | |
| TGAATGTAATCTCTTGCGCC+AGG | - | 32566:7910-7929 | None:intergenic | 45.0% | |
| TGATTCTTTCAGGGCGATAG+AGG | - | 32566:6634-6653 | None:intergenic | 45.0% | |
| TGGAACTGAAAGAGTCCTGA+AGG | + | 32566:7266-7285 | MS.gene77823:CDS | 45.0% | |
| ! | TTTGTTGTGGGCCATGATTG+GGG | + | 32566:6584-6603 | MS.gene77823:CDS | 45.0% |
| !! | ACTGCTCTAAGGGTATCAAG+AGG | - | 32566:6710-6729 | None:intergenic | 45.0% |
| !! | GAAGCAGAGTTTGCTGAGAT+TGG | + | 32566:7246-7265 | MS.gene77823:CDS | 45.0% |
| !! | GTTTGTTGTGGGCCATGATT+GGG | + | 32566:6583-6602 | MS.gene77823:CDS | 45.0% |
| !! | TGTTTGTTGTGGGCCATGAT+TGG | + | 32566:6582-6601 | MS.gene77823:CDS | 45.0% |
| !!! | GGCTTTCTTTTGGGGTTTCT+AGG | - | 32566:6689-6708 | None:intergenic | 45.0% |
| AACGATATGGAGGCTCGTGT+AGG | - | 32566:6513-6532 | None:intergenic | 50.0% | |
| ACTACCACATCCTCCAGAAG+TGG | - | 32566:7958-7977 | None:intergenic | 50.0% | |
| AGCCATGGATGAAGAGGATG+AGG | - | 32566:6370-6389 | None:intergenic | 50.0% | |
| CCATGGATGAAGAGGATGAG+GGG | - | 32566:6368-6387 | None:intergenic | 50.0% | |
| CGCCAGGTGCATTATAGGTA+AGG | - | 32566:7894-7913 | None:intergenic | 50.0% | |
| CGCCATGAATACCATAGGTC+AGG | - | 32566:6395-6414 | None:intergenic | 50.0% | |
| GATAAAGTGGACCAGGGTTG+CGG | - | 32566:7305-7324 | None:intergenic | 50.0% | |
| GCCATGGATGAAGAGGATGA+GGG | - | 32566:6369-6388 | None:intergenic | 50.0% | |
| TACACGAGCCTCCATATCGT+TGG | + | 32566:6512-6531 | MS.gene77823:CDS | 50.0% | |
| TATCAGTGTCTCCGTATCCG+CGG | - | 32566:6472-6491 | None:intergenic | 50.0% | |
| TCTTGCGCCAGGTGCATTAT+AGG | - | 32566:7899-7918 | None:intergenic | 50.0% | |
| TGGTAGTAATCGAAGGGGCA+GGG | + | 32566:7971-7990 | MS.gene77823:CDS | 50.0% | |
| TTGCCATGGTTACCGTTGTG+TGG | + | 32566:6436-6455 | MS.gene77823:CDS | 50.0% | |
| TTTCTGACTTACCGCAACCC+TGG | + | 32566:7291-7310 | MS.gene77823:CDS | 50.0% | |
| ! | TTGACTTGAGCACCAGTCCA+TGG | - | 32566:7838-7857 | None:intergenic | 50.0% |
| !! | GAAGAGAGATGTGCCACTTC+TGG | + | 32566:7942-7961 | MS.gene77823:CDS | 50.0% |
| ACCATAGGTCAGGGAAGCCA+TGG | - | 32566:6385-6404 | None:intergenic | 55.0% | |
| ACTGGGAGCTCAATGCTCCA+TGG | + | 32566:7818-7837 | MS.gene77823:CDS | 55.0% | |
| AGCCATGGGGGCAACACTAT+AGG | - | 32566:7366-7385 | None:intergenic | 55.0% | |
| CAGGGAAGCCATGGATGAAG+AGG | - | 32566:6376-6395 | None:intergenic | 55.0% | |
| CCCCTCATCCTCTTCATCCA+TGG | + | 32566:6365-6384 | MS.gene77823:CDS | 55.0% | |
| CTCCTATAGTGTTGCCCCCA+TGG | + | 32566:7361-7380 | MS.gene77823:CDS | 55.0% | |
| GAGCTCAATGCTCCATGGAC+TGG | + | 32566:7823-7842 | MS.gene77823:CDS | 55.0% | |
| GGACTTCTTGACGCCATTGC+TGG | + | 32566:6545-6564 | MS.gene77823:CDS | 55.0% | |
| GGTGGCGCCATGAATACCAT+AGG | - | 32566:6400-6419 | None:intergenic | 55.0% | |
| GTGGTAGTAATCGAAGGGGC+AGG | + | 32566:7970-7989 | MS.gene77823:CDS | 55.0% | |
| TCCATGGCTTCCCTGACCTA+TGG | + | 32566:6381-6400 | MS.gene77823:CDS | 55.0% | |
| TGGAGGCTCGTGTAGGATGT+CGG | - | 32566:6506-6525 | None:intergenic | 55.0% | |
| ! | ATTGGGGTGCCCTTACTGCT+TGG | + | 32566:6600-6619 | MS.gene77823:CDS | 55.0% |
| !! | CAGTAAGGGCACCCCAATCA+TGG | - | 32566:6598-6617 | None:intergenic | 55.0% |
| !! | GAGAGATGTGCCACTTCTGG+AGG | + | 32566:7945-7964 | MS.gene77823:CDS | 55.0% |
| !! | TGTGCCACTTCTGGAGGATG+TGG | + | 32566:7951-7970 | MS.gene77823:CDS | 55.0% |
| GCTCGTGTAGGATGTCGGTG+AGG | - | 32566:6501-6520 | None:intergenic | 60.0% | |
| GGGCCACACAACGGTAACCA+TGG | - | 32566:6442-6461 | None:intergenic | 60.0% | |
| GTGTAGGATGTCGGTGAGGC+TGG | - | 32566:6497-6516 | None:intergenic | 60.0% | |
| TCTCCGTATCCGCGGAGATC+CGG | - | 32566:6464-6483 | None:intergenic | 60.0% | |
| TGGTTACCGTTGTGTGGCCC+CGG | + | 32566:6442-6461 | MS.gene77823:CDS | 60.0% | |
| CTCCGTATCCGCGGAGATCC+GGG | - | 32566:6463-6482 | None:intergenic | 65.0% | |
| GGAGATCCGGGGCCACACAA+CGG | - | 32566:6451-6470 | None:intergenic | 65.0% | |
| TCCGTATCCGCGGAGATCCG+GGG | - | 32566:6462-6481 | None:intergenic | 65.0% | |
| GCCCCGGATCTCCGCGGATA+CGG | + | 32566:6458-6477 | MS.gene77823:CDS | 70.0% | |
| TGTGTGGCCCCGGATCTCCG+CGG | + | 32566:6452-6471 | MS.gene77823:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 32566 | gene | 6287 | 8062 | 6287 | ID=MS.gene77823 |
| 32566 | mRNA | 6287 | 8062 | 6287 | ID=MS.gene77823.t1;Parent=MS.gene77823 |
| 32566 | exon | 6287 | 6763 | 6287 | ID=MS.gene77823.t1.exon1;Parent=MS.gene77823.t1 |
| 32566 | CDS | 6287 | 6763 | 6287 | ID=cds.MS.gene77823.t1;Parent=MS.gene77823.t1 |
| 32566 | exon | 7231 | 7472 | 7231 | ID=MS.gene77823.t1.exon2;Parent=MS.gene77823.t1 |
| 32566 | CDS | 7231 | 7472 | 7231 | ID=cds.MS.gene77823.t1;Parent=MS.gene77823.t1 |
| 32566 | exon | 7816 | 8062 | 7816 | ID=MS.gene77823.t1.exon3;Parent=MS.gene77823.t1 |
| 32566 | CDS | 7816 | 8062 | 7816 | ID=cds.MS.gene77823.t1;Parent=MS.gene77823.t1 |
| Gene Sequence |
| Protein sequence |
