Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035371.t1 | KEH32298.1 | 96.3 | 321 | 12 | 0 | 1 | 321 | 35 | 355 | 2.70E-189 | 671 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035371.t1 | I6YGS0 | 36.2 | 320 | 182 | 7 | 9 | 317 | 7 | 315 | 4.9e-54 | 213.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035371.t1 | A0A072UTA2 | 96.3 | 321 | 12 | 0 | 1 | 321 | 35 | 355 | 2.0e-189 | 671.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035371.t1 | MTR_4g120240 | 96.262 | 321 | 12 | 0 | 1 | 321 | 35 | 355 | 0.0 | 648 |
| MS.gene035371.t1 | MTR_7g108825 | 61.129 | 319 | 122 | 1 | 3 | 321 | 1 | 317 | 4.91e-148 | 419 |
| MS.gene035371.t1 | MTR_7g112970 | 61.250 | 320 | 119 | 3 | 3 | 321 | 1 | 316 | 6.87e-148 | 419 |
| MS.gene035371.t1 | MTR_7g113020 | 61.994 | 321 | 118 | 3 | 3 | 321 | 1 | 319 | 3.84e-146 | 414 |
| MS.gene035371.t1 | MTR_7g112960 | 61.682 | 321 | 119 | 3 | 3 | 321 | 1 | 319 | 1.05e-145 | 413 |
| MS.gene035371.t1 | MTR_7g112963 | 61.371 | 321 | 120 | 3 | 3 | 321 | 1 | 319 | 2.36e-145 | 412 |
| MS.gene035371.t1 | MTR_7g113050 | 60.125 | 321 | 124 | 3 | 3 | 321 | 1 | 319 | 4.52e-144 | 409 |
| MS.gene035371.t1 | MTR_7g112615 | 60.436 | 321 | 123 | 3 | 3 | 321 | 1 | 319 | 8.52e-144 | 408 |
| MS.gene035371.t1 | MTR_7g113030 | 59.813 | 321 | 125 | 3 | 3 | 321 | 1 | 319 | 2.84e-143 | 407 |
| MS.gene035371.t1 | MTR_7g112620 | 59.190 | 321 | 127 | 3 | 3 | 321 | 1 | 319 | 1.09e-140 | 400 |
| MS.gene035371.t1 | MTR_4g005160 | 56.790 | 324 | 133 | 4 | 3 | 321 | 1 | 322 | 1.56e-133 | 382 |
| MS.gene035371.t1 | MTR_7g113010 | 61.131 | 283 | 106 | 3 | 3 | 283 | 1 | 281 | 1.71e-123 | 366 |
| MS.gene035371.t1 | MTR_7g113050 | 61.667 | 240 | 88 | 3 | 3 | 240 | 1 | 238 | 1.67e-105 | 308 |
| MS.gene035371.t1 | MTR_8g076680 | 47.352 | 321 | 165 | 3 | 1 | 321 | 1 | 317 | 2.26e-105 | 311 |
| MS.gene035371.t1 | MTR_7g112615 | 61.250 | 240 | 89 | 3 | 3 | 240 | 1 | 238 | 3.75e-104 | 305 |
| MS.gene035371.t1 | MTR_7g108825 | 59.244 | 238 | 95 | 1 | 3 | 240 | 1 | 236 | 4.13e-102 | 299 |
| MS.gene035371.t1 | MTR_8g076680 | 49.167 | 240 | 120 | 1 | 1 | 240 | 1 | 238 | 2.98e-81 | 246 |
| MS.gene035371.t1 | MTR_7g112615 | 63.529 | 170 | 58 | 3 | 3 | 170 | 1 | 168 | 6.55e-73 | 223 |
| MS.gene035371.t1 | MTR_1g083480 | 60.625 | 160 | 58 | 2 | 3 | 159 | 1 | 158 | 9.53e-68 | 210 |
| MS.gene035371.t1 | MTR_2g090245 | 36.025 | 322 | 190 | 9 | 3 | 320 | 1 | 310 | 6.19e-59 | 192 |
| MS.gene035371.t1 | MTR_2g090240 | 34.161 | 322 | 196 | 8 | 3 | 320 | 1 | 310 | 1.00e-58 | 191 |
| MS.gene035371.t1 | MTR_4g089060 | 34.675 | 323 | 192 | 9 | 3 | 320 | 1 | 309 | 6.16e-58 | 189 |
| MS.gene035371.t1 | MTR_4g089040 | 33.022 | 321 | 200 | 7 | 3 | 320 | 1 | 309 | 4.18e-56 | 184 |
| MS.gene035371.t1 | MTR_4g089060 | 32.286 | 350 | 191 | 10 | 3 | 320 | 1 | 336 | 7.09e-53 | 177 |
| MS.gene035371.t1 | MTR_7g112910 | 40.726 | 248 | 89 | 7 | 76 | 321 | 4 | 195 | 4.52e-50 | 165 |
| MS.gene035371.t1 | MTR_4g089060 | 35.745 | 235 | 138 | 6 | 3 | 233 | 1 | 226 | 3.44e-45 | 154 |
| MS.gene035371.t1 | MTR_3g024250 | 57.009 | 107 | 44 | 1 | 49 | 155 | 3 | 107 | 7.75e-36 | 126 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035371.t1 | AT4G02340 | 59.561 | 319 | 126 | 2 | 3 | 321 | 1 | 316 | 2.73e-149 | 422 |
| MS.gene035371.t1 | AT4G15960 | 58.951 | 324 | 128 | 1 | 3 | 321 | 51 | 374 | 1.39e-148 | 422 |
| MS.gene035371.t1 | AT3G05600 | 56.481 | 324 | 136 | 2 | 3 | 321 | 1 | 324 | 4.34e-140 | 399 |
| MS.gene035371.t1 | AT2G26740 | 57.632 | 321 | 131 | 3 | 6 | 321 | 1 | 321 | 1.10e-129 | 372 |
| MS.gene035371.t1 | AT2G26750 | 55.625 | 320 | 138 | 2 | 6 | 321 | 1 | 320 | 3.65e-127 | 366 |
| MS.gene035371.t1 | AT4G15955 | 54.321 | 324 | 114 | 4 | 7 | 321 | 6 | 304 | 1.26e-122 | 354 |
| MS.gene035371.t1 | AT3G51000 | 45.938 | 320 | 166 | 5 | 5 | 321 | 4 | 319 | 5.01e-100 | 297 |
| MS.gene035371.t1 | AT3G05600 | 56.790 | 243 | 100 | 2 | 3 | 240 | 1 | 243 | 9.59e-100 | 294 |
| MS.gene035371.t1 | AT4G15955 | 63.793 | 174 | 54 | 2 | 7 | 171 | 6 | 179 | 1.03e-79 | 241 |
| MS.gene035371.t1 | AT4G15955 | 63.636 | 165 | 51 | 2 | 7 | 162 | 6 | 170 | 3.13e-74 | 226 |
Find 0 sgRNAs with CRISPR-Local
Find 151 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATCAAATTTATCTCAT+TGG | + | 32560:4040-4059 | None:intergenic | 15.0% |
| !!! | CTAAATAGTTTTGAATTTTT+TGG | - | 32560:3205-3224 | MS.gene035371:intron | 15.0% |
| !!! | TTTTTTTACAGTAAAATCTA+TGG | - | 32560:3890-3909 | MS.gene035371:intron | 15.0% |
| !! | ATTTGATCAAGTAAATACTA+AGG | + | 32560:3184-3203 | None:intergenic | 20.0% |
| !! | TAATGAGTTAGTAAGAAATA+TGG | - | 32560:3988-4007 | MS.gene035371:CDS | 20.0% |
| !! | TTTGATCAAGTAAATACTAA+GGG | + | 32560:3183-3202 | None:intergenic | 20.0% |
| !!! | AATTTTTTAATTGAGCAAAC+CGG | - | 32560:3364-3383 | MS.gene035371:CDS | 20.0% |
| !!! | TTTACTTTGAAAATCATGAT+CGG | - | 32560:3423-3442 | MS.gene035371:CDS | 20.0% |
| ! | AATATACACATAGCTGAAAA+GGG | - | 32560:2675-2694 | MS.gene035371:CDS | 25.0% |
| ! | ATGTACAAACCTTAAATCTA+AGG | + | 32560:3143-3162 | None:intergenic | 25.0% |
| ! | TGTACAAACCTTAAATCTAA+GGG | + | 32560:3142-3161 | None:intergenic | 25.0% |
| ! | TTTACAGTAAAATCTATGGA+GGG | - | 32560:3894-3913 | MS.gene035371:intron | 25.0% |
| !! | CAAAGATATATTGTTCTAAG+TGG | - | 32560:3522-3541 | MS.gene035371:intron | 25.0% |
| !! | TTTTACAGTAAAATCTATGG+AGG | - | 32560:3893-3912 | MS.gene035371:intron | 25.0% |
| !!! | TTTTTTCAGATGTCTACTTT+CGG | + | 32560:3337-3356 | None:intergenic | 25.0% |
| AACACTATAGGAGAATCATT+TGG | + | 32560:3695-3714 | None:intergenic | 30.0% | |
| AATAAAGGATACCTGAAATC+TGG | + | 32560:3096-3115 | None:intergenic | 30.0% | |
| ATTACCATAAACTGCTCTAA+GGG | + | 32560:3060-3079 | None:intergenic | 30.0% | |
| CAATATACACATAGCTGAAA+AGG | - | 32560:2674-2693 | MS.gene035371:CDS | 30.0% | |
| GTAAGTTTATCTTCAACTCT+AGG | - | 32560:3814-3833 | MS.gene035371:intron | 30.0% | |
| TCTGTCAATTGCAATATTAC+AGG | - | 32560:3550-3569 | MS.gene035371:intron | 30.0% | |
| TGTCTCTATCAATGTTTCAT+AGG | - | 32560:4080-4099 | MS.gene035371:CDS | 30.0% | |
| !! | TCCAGTCTTGTTAAATTTAG+AGG | + | 32560:3756-3775 | None:intergenic | 30.0% |
| AGAGATTACATTCACAAAGG+TGG | - | 32560:4257-4276 | MS.gene035371:CDS | 35.0% | |
| AGTTCCAGTGAAGTTTATAG+TGG | - | 32560:4199-4218 | MS.gene035371:CDS | 35.0% | |
| ATCTAAGGGAGCTTATCTAT+AGG | + | 32560:3128-3147 | None:intergenic | 35.0% | |
| ATTCTTGTTGCAATAGCCAT+GGG | + | 32560:3721-3740 | None:intergenic | 35.0% | |
| CAAATGCAAGAGAAGCAATA+TGG | + | 32560:4134-4153 | None:intergenic | 35.0% | |
| CATTACCATAAACTGCTCTA+AGG | + | 32560:3061-3080 | None:intergenic | 35.0% | |
| CTACTATATCTCCAGATTTC+AGG | - | 32560:3082-3101 | MS.gene035371:intron | 35.0% | |
| CTCTTGCATTTGTAGAAACT+GGG | - | 32560:4142-4161 | MS.gene035371:CDS | 35.0% | |
| CTTTATCTACCTAAGGGTAA+AGG | - | 32560:3659-3678 | MS.gene035371:intron | 35.0% | |
| GAGATTACATTCACAAAGGT+GGG | - | 32560:4258-4277 | MS.gene035371:CDS | 35.0% | |
| GATAAGCTCCCTTAGATTTA+AGG | - | 32560:3131-3150 | MS.gene035371:intron | 35.0% | |
| GCAAGAGATTACATTCACAA+AGG | - | 32560:4254-4273 | MS.gene035371:CDS | 35.0% | |
| GCCTCTAAATTTAACAAGAC+TGG | - | 32560:3752-3771 | MS.gene035371:intron | 35.0% | |
| GTGTATATTGATGCCATTGA+CGG | + | 32560:2664-2683 | None:intergenic | 35.0% | |
| GTTCCAGTGAAGTTTATAGT+GGG | - | 32560:4200-4219 | MS.gene035371:CDS | 35.0% | |
| TCTAAGGGAGCTTATCTATA+GGG | + | 32560:3127-3146 | None:intergenic | 35.0% | |
| TCTCTTGCATTTGTAGAAAC+TGG | - | 32560:4141-4160 | MS.gene035371:CDS | 35.0% | |
| TTAACAAGACTGGATTCACA+GGG | - | 32560:3762-3781 | MS.gene035371:intron | 35.0% | |
| TTACCCTTAGGTAGATAAAG+TGG | + | 32560:3659-3678 | None:intergenic | 35.0% | |
| TTTAACAAGACTGGATTCAC+AGG | - | 32560:3761-3780 | MS.gene035371:intron | 35.0% | |
| ! | GTATCAAGAGGCTTTCTTTT+GGG | + | 32560:3038-3057 | None:intergenic | 35.0% |
| ! | TATCAAGAGGCTTTCTTTTG+GGG | + | 32560:3037-3056 | None:intergenic | 35.0% |
| ! | TGATCGGAATTTTCGAAATG+TGG | - | 32560:3439-3458 | MS.gene035371:CDS | 35.0% |
| !! | CATATCGTTGGTGATATCAT+CGG | - | 32560:2864-2883 | MS.gene035371:intron | 35.0% |
| !!! | GTGGATTGGTGTAGTTATTT+TGG | - | 32560:3495-3514 | MS.gene035371:intron | 35.0% |
| AACTCTGCTTCTATATCACC+AGG | + | 32560:3578-3597 | None:intergenic | 40.0% | |
| AAGCTAGATATGTGATCTGG+TGG | + | 32560:2758-2777 | None:intergenic | 40.0% | |
| ACAAGAGCCTTGATTCTTTC+AGG | + | 32560:2984-3003 | None:intergenic | 40.0% | |
| AGCTTATCTATAGGGACTGA+GGG | + | 32560:3119-3138 | None:intergenic | 40.0% | |
| AGGATGTGGTAGTAATCGAA+GGG | - | 32560:4306-4325 | MS.gene035371:CDS | 40.0% | |
| ATTGCAATATTACAGGAGCC+TGG | - | 32560:3557-3576 | MS.gene035371:intron | 40.0% | |
| CAAGAGCCTTGATTCTTTCA+GGG | + | 32560:2983-3002 | None:intergenic | 40.0% | |
| CAATCCACAAAAACTCAGCA+TGG | + | 32560:3483-3502 | None:intergenic | 40.0% | |
| CATGTTTGATCAGTAAGTGC+CGG | + | 32560:3386-3405 | None:intergenic | 40.0% | |
| CATTCTTGTTGCAATAGCCA+TGG | + | 32560:3722-3741 | None:intergenic | 40.0% | |
| CGATGATATCACCAACGATA+TGG | + | 32560:2866-2885 | None:intergenic | 40.0% | |
| GATACCCTTAGAGCAGTTTA+TGG | - | 32560:3053-3072 | MS.gene035371:intron | 40.0% | |
| GCACTTCATCCATCAAGAAA+GGG | - | 32560:4334-4353 | MS.gene035371:CDS | 40.0% | |
| GGAAAGATACCAAGCAGTAA+GGG | + | 32560:2952-2971 | None:intergenic | 40.0% | |
| GGTAAGTCAGAAATTCCTTC+AGG | + | 32560:3625-3644 | None:intergenic | 40.0% | |
| GGTCCACTTTATCTACCTAA+GGG | - | 32560:3653-3672 | MS.gene035371:intron | 40.0% | |
| TAACAAGACTGGATTCACAG+GGG | - | 32560:3763-3782 | MS.gene035371:intron | 40.0% | |
| TAGGTAGATAAAGTGGACCA+GGG | + | 32560:3652-3671 | None:intergenic | 40.0% | |
| TATAGGGACTGAGGGAATAA+AGG | + | 32560:3111-3130 | None:intergenic | 40.0% | |
| TCACCCACTATAAACTTCAC+TGG | + | 32560:4206-4225 | None:intergenic | 40.0% | |
| TCTTATCAGCCCTTTCTTGA+TGG | + | 32560:4346-4365 | None:intergenic | 40.0% | |
| TGATATCACCAACGATATGG+AGG | + | 32560:2863-2882 | None:intergenic | 40.0% | |
| TGCCATTGACGGTTACAATT+CGG | + | 32560:2653-2672 | None:intergenic | 40.0% | |
| TGGTCCACTTTATCTACCTA+AGG | - | 32560:3652-3671 | MS.gene035371:intron | 40.0% | |
| TGTCCAAAACCTTTACCCTT+AGG | + | 32560:3671-3690 | None:intergenic | 40.0% | |
| TTAGGTAGATAAAGTGGACC+AGG | + | 32560:3653-3672 | None:intergenic | 40.0% | |
| TTCTTGTTGCAATAGCCATG+GGG | + | 32560:3720-3739 | None:intergenic | 40.0% | |
| ! | ATCACATATCTAGCTTGCCA+TGG | - | 32560:2762-2781 | MS.gene035371:CDS | 40.0% |
| ! | CAATCCATGCTGAGTTTTTG+TGG | - | 32560:3476-3495 | MS.gene035371:intron | 40.0% |
| ! | CATGCTGAGTTTTTGTGGAT+TGG | - | 32560:3481-3500 | MS.gene035371:intron | 40.0% |
| ! | CTACCTAAGGGTAAAGGTTT+TGG | - | 32560:3665-3684 | MS.gene035371:intron | 40.0% |
| ! | GGAATTTTCGAAATGTGGAG+TGG | - | 32560:3444-3463 | MS.gene035371:intron | 40.0% |
| ! | GGTATCAAGAGGCTTTCTTT+TGG | + | 32560:3039-3058 | None:intergenic | 40.0% |
| !! | CAAGAGAAGGTGTTTGTTGT+GGG | - | 32560:2912-2931 | MS.gene035371:intron | 40.0% |
| !! | TCAAGAGAAGGTGTTTGTTG+TGG | - | 32560:2911-2930 | MS.gene035371:intron | 40.0% |
| CACATAGCTGAAAAGGGTCA+AGG | - | 32560:2681-2700 | MS.gene035371:CDS | 45.0% | |
| CACCGAATTGTAACCGTCAA+TGG | - | 32560:2648-2667 | MS.gene035371:CDS | 45.0% | |
| CATTGCTGGTGATCAAGAGA+AGG | - | 32560:2899-2918 | MS.gene035371:intron | 45.0% | |
| CGGCACTTACTGATCAAACA+TGG | - | 32560:3384-3403 | MS.gene035371:CDS | 45.0% | |
| CTATCGCCCTGAAAGAATCA+AGG | - | 32560:2974-2993 | MS.gene035371:intron | 45.0% | |
| CTTCTCTTGATCACCAGCAA+TGG | + | 32560:2901-2920 | None:intergenic | 45.0% | |
| GACCTTACCTATAATGCACC+TGG | - | 32560:4230-4249 | MS.gene035371:CDS | 45.0% | |
| GAGCTTATCTATAGGGACTG+AGG | + | 32560:3120-3139 | None:intergenic | 45.0% | |
| GAGGATGTGGTAGTAATCGA+AGG | - | 32560:4305-4324 | MS.gene035371:CDS | 45.0% | |
| GATTCTTTCAGGGCGATAGA+GGG | + | 32560:2973-2992 | None:intergenic | 45.0% | |
| GCCATGAATACCATAGGTCA+GGG | + | 32560:2734-2753 | None:intergenic | 45.0% | |
| GGATGTGGTAGTAATCGAAG+GGG | - | 32560:4307-4326 | MS.gene035371:CDS | 45.0% | |
| GGCAAGCTAGATATGTGATC+TGG | + | 32560:2761-2780 | None:intergenic | 45.0% | |
| GGCACTTCATCCATCAAGAA+AGG | - | 32560:4333-4352 | MS.gene035371:CDS | 45.0% | |
| GGGAAAGATACCAAGCAGTA+AGG | + | 32560:2953-2972 | None:intergenic | 45.0% | |
| TCCCTGACCTATGGTATTCA+TGG | - | 32560:2730-2749 | MS.gene035371:CDS | 45.0% | |
| TCTTGTTGCAATAGCCATGG+GGG | + | 32560:3719-3738 | None:intergenic | 45.0% | |
| TGAATGTAATCTCTTGCGCC+AGG | + | 32560:4251-4270 | None:intergenic | 45.0% | |
| TGATTCTTTCAGGGCGATAG+AGG | + | 32560:2974-2993 | None:intergenic | 45.0% | |
| TGGAACTGAAAGAGTCCTGA+AGG | - | 32560:3607-3626 | MS.gene035371:intron | 45.0% | |
| ! | TTTGTTGTGGGCCATGATTG+GGG | - | 32560:2924-2943 | MS.gene035371:intron | 45.0% |
| !! | ACTGCTCTAAGGGTATCAAG+AGG | + | 32560:3050-3069 | None:intergenic | 45.0% |
| !! | GAAGCAGAGTTTGCTGAGAT+TGG | - | 32560:3587-3606 | MS.gene035371:intron | 45.0% |
| !! | GTTTGTTGTGGGCCATGATT+GGG | - | 32560:2923-2942 | MS.gene035371:intron | 45.0% |
| !! | TGTTTGTTGTGGGCCATGAT+TGG | - | 32560:2922-2941 | MS.gene035371:intron | 45.0% |
| !!! | GGCTTTCTTTTGGGGTTTCT+AGG | + | 32560:3029-3048 | None:intergenic | 45.0% |
| AACGATATGGAGGCTCGTGT+AGG | + | 32560:2853-2872 | None:intergenic | 50.0% | |
| ACTACCACATCCTCCAGAAG+TGG | + | 32560:4299-4318 | None:intergenic | 50.0% | |
| AGCCATGGATGAAGAGGATG+AGG | + | 32560:2710-2729 | None:intergenic | 50.0% | |
| CCATGGATGAAGAGGATGAG+GGG | + | 32560:2708-2727 | None:intergenic | 50.0% | |
| CGCCAGGTGCATTATAGGTA+AGG | + | 32560:4235-4254 | None:intergenic | 50.0% | |
| CGCCATGAATACCATAGGTC+AGG | + | 32560:2735-2754 | None:intergenic | 50.0% | |
| GATAAAGTGGACCAGGGTTG+CGG | + | 32560:3646-3665 | None:intergenic | 50.0% | |
| GCCATGGATGAAGAGGATGA+GGG | + | 32560:2709-2728 | None:intergenic | 50.0% | |
| TACACGAGCCTCCATATCGT+TGG | - | 32560:2852-2871 | MS.gene035371:CDS | 50.0% | |
| TATCAGTGTCTCCGTATCCG+CGG | + | 32560:2812-2831 | None:intergenic | 50.0% | |
| TCTTGCGCCAGGTGCATTAT+AGG | + | 32560:4240-4259 | None:intergenic | 50.0% | |
| TGGTAGTAATCGAAGGGGCA+GGG | - | 32560:4312-4331 | MS.gene035371:CDS | 50.0% | |
| TTGCCATGGTTACCGTTGTG+TGG | - | 32560:2776-2795 | MS.gene035371:CDS | 50.0% | |
| TTTCTGACTTACCGCAACCC+TGG | - | 32560:3632-3651 | MS.gene035371:intron | 50.0% | |
| ! | TTGACTTGAGCACCAGTCCA+TGG | + | 32560:4179-4198 | None:intergenic | 50.0% |
| !! | GAAGAGAGATGTGCCACTTC+TGG | - | 32560:4283-4302 | MS.gene035371:CDS | 50.0% |
| ACCATAGGTCAGGGAAGCCA+TGG | + | 32560:2725-2744 | None:intergenic | 55.0% | |
| ACTGGGAGCTCAATGCTCCA+TGG | - | 32560:4159-4178 | MS.gene035371:CDS | 55.0% | |
| AGCCATGGGGGCAACACTAT+AGG | + | 32560:3707-3726 | None:intergenic | 55.0% | |
| CAGGGAAGCCATGGATGAAG+AGG | + | 32560:2716-2735 | None:intergenic | 55.0% | |
| CCCCTCATCCTCTTCATCCA+TGG | - | 32560:2705-2724 | MS.gene035371:CDS | 55.0% | |
| CTCCTATAGTGTTGCCCCCA+TGG | - | 32560:3702-3721 | MS.gene035371:intron | 55.0% | |
| GAGCTCAATGCTCCATGGAC+TGG | - | 32560:4164-4183 | MS.gene035371:CDS | 55.0% | |
| GGACTTCTTGACGCCATTGC+TGG | - | 32560:2885-2904 | MS.gene035371:intron | 55.0% | |
| GGTGGCGCCATGAATACCAT+AGG | + | 32560:2740-2759 | None:intergenic | 55.0% | |
| GTGGTAGTAATCGAAGGGGC+AGG | - | 32560:4311-4330 | MS.gene035371:CDS | 55.0% | |
| TCCATGGCTTCCCTGACCTA+TGG | - | 32560:2721-2740 | MS.gene035371:CDS | 55.0% | |
| TGGAGGCTCGTGTAGGATGT+CGG | + | 32560:2846-2865 | None:intergenic | 55.0% | |
| ! | ATTGGGGTGCCCTTACTGCT+TGG | - | 32560:2940-2959 | MS.gene035371:intron | 55.0% |
| !! | CAGTAAGGGCACCCCAATCA+TGG | + | 32560:2938-2957 | None:intergenic | 55.0% |
| !! | GAGAGATGTGCCACTTCTGG+AGG | - | 32560:4286-4305 | MS.gene035371:CDS | 55.0% |
| !! | TGTGCCACTTCTGGAGGATG+TGG | - | 32560:4292-4311 | MS.gene035371:CDS | 55.0% |
| GCTCGTGTAGGATGTCGGTG+AGG | + | 32560:2841-2860 | None:intergenic | 60.0% | |
| GGGCCACACAACGGTAACCA+TGG | + | 32560:2782-2801 | None:intergenic | 60.0% | |
| GTGTAGGATGTCGGTGAGGC+TGG | + | 32560:2837-2856 | None:intergenic | 60.0% | |
| TCTCCGTATCCGCGGAGATC+CGG | + | 32560:2804-2823 | None:intergenic | 60.0% | |
| TGGTTACCGTTGTGTGGCCC+CGG | - | 32560:2782-2801 | MS.gene035371:CDS | 60.0% | |
| CTCCGTATCCGCGGAGATCC+GGG | + | 32560:2803-2822 | None:intergenic | 65.0% | |
| GGAGATCCGGGGCCACACAA+CGG | + | 32560:2791-2810 | None:intergenic | 65.0% | |
| TCCGTATCCGCGGAGATCCG+GGG | + | 32560:2802-2821 | None:intergenic | 65.0% | |
| GCCCCGGATCTCCGCGGATA+CGG | - | 32560:2798-2817 | MS.gene035371:CDS | 70.0% | |
| TGTGTGGCCCCGGATCTCCG+CGG | - | 32560:2792-2811 | MS.gene035371:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 32560 | gene | 2627 | 4403 | 2627 | ID=MS.gene035371 |
| 32560 | mRNA | 2627 | 4403 | 2627 | ID=MS.gene035371.t1;Parent=MS.gene035371 |
| 32560 | exon | 3927 | 4403 | 3927 | ID=MS.gene035371.t1.exon1;Parent=MS.gene035371.t1 |
| 32560 | CDS | 3927 | 4403 | 3927 | ID=cds.MS.gene035371.t1;Parent=MS.gene035371.t1 |
| 32560 | exon | 3217 | 3458 | 3217 | ID=MS.gene035371.t1.exon2;Parent=MS.gene035371.t1 |
| 32560 | CDS | 3217 | 3458 | 3217 | ID=cds.MS.gene035371.t1;Parent=MS.gene035371.t1 |
| 32560 | exon | 2627 | 2873 | 2627 | ID=MS.gene035371.t1.exon3;Parent=MS.gene035371.t1 |
| 32560 | CDS | 2627 | 2873 | 2627 | ID=cds.MS.gene035371.t1;Parent=MS.gene035371.t1 |
| Gene Sequence |
| Protein sequence |
