Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035373.t1 | KEH32298.1 | 96.3 | 321 | 12 | 0 | 1 | 321 | 35 | 355 | 2.70E-189 | 671 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035373.t1 | I6YGS0 | 36.2 | 320 | 182 | 7 | 9 | 317 | 7 | 315 | 4.9e-54 | 213.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035373.t1 | A0A072UTA2 | 96.3 | 321 | 12 | 0 | 1 | 321 | 35 | 355 | 2.0e-189 | 671.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035373.t1 | MTR_4g120240 | 96.262 | 321 | 12 | 0 | 1 | 321 | 35 | 355 | 0.0 | 648 |
| MS.gene035373.t1 | MTR_7g108825 | 61.129 | 319 | 122 | 1 | 3 | 321 | 1 | 317 | 4.91e-148 | 419 |
| MS.gene035373.t1 | MTR_7g112970 | 61.250 | 320 | 119 | 3 | 3 | 321 | 1 | 316 | 6.87e-148 | 419 |
| MS.gene035373.t1 | MTR_7g113020 | 61.994 | 321 | 118 | 3 | 3 | 321 | 1 | 319 | 3.84e-146 | 414 |
| MS.gene035373.t1 | MTR_7g112960 | 61.682 | 321 | 119 | 3 | 3 | 321 | 1 | 319 | 1.05e-145 | 413 |
| MS.gene035373.t1 | MTR_7g112963 | 61.371 | 321 | 120 | 3 | 3 | 321 | 1 | 319 | 2.36e-145 | 412 |
| MS.gene035373.t1 | MTR_7g113050 | 60.125 | 321 | 124 | 3 | 3 | 321 | 1 | 319 | 4.52e-144 | 409 |
| MS.gene035373.t1 | MTR_7g112615 | 60.436 | 321 | 123 | 3 | 3 | 321 | 1 | 319 | 8.52e-144 | 408 |
| MS.gene035373.t1 | MTR_7g113030 | 59.813 | 321 | 125 | 3 | 3 | 321 | 1 | 319 | 2.84e-143 | 407 |
| MS.gene035373.t1 | MTR_7g112620 | 59.190 | 321 | 127 | 3 | 3 | 321 | 1 | 319 | 1.09e-140 | 400 |
| MS.gene035373.t1 | MTR_4g005160 | 56.790 | 324 | 133 | 4 | 3 | 321 | 1 | 322 | 1.56e-133 | 382 |
| MS.gene035373.t1 | MTR_7g113010 | 61.131 | 283 | 106 | 3 | 3 | 283 | 1 | 281 | 1.71e-123 | 366 |
| MS.gene035373.t1 | MTR_7g113050 | 61.667 | 240 | 88 | 3 | 3 | 240 | 1 | 238 | 1.67e-105 | 308 |
| MS.gene035373.t1 | MTR_8g076680 | 47.352 | 321 | 165 | 3 | 1 | 321 | 1 | 317 | 2.26e-105 | 311 |
| MS.gene035373.t1 | MTR_7g112615 | 61.250 | 240 | 89 | 3 | 3 | 240 | 1 | 238 | 3.75e-104 | 305 |
| MS.gene035373.t1 | MTR_7g108825 | 59.244 | 238 | 95 | 1 | 3 | 240 | 1 | 236 | 4.13e-102 | 299 |
| MS.gene035373.t1 | MTR_8g076680 | 49.167 | 240 | 120 | 1 | 1 | 240 | 1 | 238 | 2.98e-81 | 246 |
| MS.gene035373.t1 | MTR_7g112615 | 63.529 | 170 | 58 | 3 | 3 | 170 | 1 | 168 | 6.55e-73 | 223 |
| MS.gene035373.t1 | MTR_1g083480 | 60.625 | 160 | 58 | 2 | 3 | 159 | 1 | 158 | 9.53e-68 | 210 |
| MS.gene035373.t1 | MTR_2g090245 | 36.025 | 322 | 190 | 9 | 3 | 320 | 1 | 310 | 6.19e-59 | 192 |
| MS.gene035373.t1 | MTR_2g090240 | 34.161 | 322 | 196 | 8 | 3 | 320 | 1 | 310 | 1.00e-58 | 191 |
| MS.gene035373.t1 | MTR_4g089060 | 34.675 | 323 | 192 | 9 | 3 | 320 | 1 | 309 | 6.16e-58 | 189 |
| MS.gene035373.t1 | MTR_4g089040 | 33.022 | 321 | 200 | 7 | 3 | 320 | 1 | 309 | 4.18e-56 | 184 |
| MS.gene035373.t1 | MTR_4g089060 | 32.286 | 350 | 191 | 10 | 3 | 320 | 1 | 336 | 7.09e-53 | 177 |
| MS.gene035373.t1 | MTR_7g112910 | 40.726 | 248 | 89 | 7 | 76 | 321 | 4 | 195 | 4.52e-50 | 165 |
| MS.gene035373.t1 | MTR_4g089060 | 35.745 | 235 | 138 | 6 | 3 | 233 | 1 | 226 | 3.44e-45 | 154 |
| MS.gene035373.t1 | MTR_3g024250 | 57.009 | 107 | 44 | 1 | 49 | 155 | 3 | 107 | 7.75e-36 | 126 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035373.t1 | AT4G02340 | 59.561 | 319 | 126 | 2 | 3 | 321 | 1 | 316 | 2.73e-149 | 422 |
| MS.gene035373.t1 | AT4G15960 | 58.951 | 324 | 128 | 1 | 3 | 321 | 51 | 374 | 1.39e-148 | 422 |
| MS.gene035373.t1 | AT3G05600 | 56.481 | 324 | 136 | 2 | 3 | 321 | 1 | 324 | 4.34e-140 | 399 |
| MS.gene035373.t1 | AT2G26740 | 57.632 | 321 | 131 | 3 | 6 | 321 | 1 | 321 | 1.10e-129 | 372 |
| MS.gene035373.t1 | AT2G26750 | 55.625 | 320 | 138 | 2 | 6 | 321 | 1 | 320 | 3.65e-127 | 366 |
| MS.gene035373.t1 | AT4G15955 | 54.321 | 324 | 114 | 4 | 7 | 321 | 6 | 304 | 1.26e-122 | 354 |
| MS.gene035373.t1 | AT3G51000 | 45.938 | 320 | 166 | 5 | 5 | 321 | 4 | 319 | 5.01e-100 | 297 |
| MS.gene035373.t1 | AT3G05600 | 56.790 | 243 | 100 | 2 | 3 | 240 | 1 | 243 | 9.59e-100 | 294 |
| MS.gene035373.t1 | AT4G15955 | 63.793 | 174 | 54 | 2 | 7 | 171 | 6 | 179 | 1.03e-79 | 241 |
| MS.gene035373.t1 | AT4G15955 | 63.636 | 165 | 51 | 2 | 7 | 162 | 6 | 170 | 3.13e-74 | 226 |
Find 0 sgRNAs with CRISPR-Local
Find 151 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATCAAATTTATCTCAT+TGG | + | 32556:3200-3219 | None:intergenic | 15.0% |
| !!! | CTAAATAGTTTTGAATTTTT+TGG | - | 32556:2365-2384 | MS.gene035373:intron | 15.0% |
| !!! | TTTTTTTACAGTAAAATCTA+TGG | - | 32556:3050-3069 | MS.gene035373:intron | 15.0% |
| !! | ATTTGATCAAGTAAATACTA+AGG | + | 32556:2344-2363 | None:intergenic | 20.0% |
| !! | TAATGAGTTAGTAAGAAATA+TGG | - | 32556:3148-3167 | MS.gene035373:CDS | 20.0% |
| !! | TTTGATCAAGTAAATACTAA+GGG | + | 32556:2343-2362 | None:intergenic | 20.0% |
| !!! | AATTTTTTAATTGAGCAAAC+CGG | - | 32556:2524-2543 | MS.gene035373:CDS | 20.0% |
| !!! | TTTACTTTGAAAATCATGAT+CGG | - | 32556:2583-2602 | MS.gene035373:CDS | 20.0% |
| ! | AATATACACATAGCTGAAAA+GGG | - | 32556:1835-1854 | MS.gene035373:CDS | 25.0% |
| ! | ATGTACAAACCTTAAATCTA+AGG | + | 32556:2303-2322 | None:intergenic | 25.0% |
| ! | TGTACAAACCTTAAATCTAA+GGG | + | 32556:2302-2321 | None:intergenic | 25.0% |
| ! | TTTACAGTAAAATCTATGGA+GGG | - | 32556:3054-3073 | MS.gene035373:intron | 25.0% |
| !! | CAAAGATATATTGTTCTAAG+TGG | - | 32556:2682-2701 | MS.gene035373:intron | 25.0% |
| !! | TTTTACAGTAAAATCTATGG+AGG | - | 32556:3053-3072 | MS.gene035373:intron | 25.0% |
| !!! | TTTTTTCAGATGTCTACTTT+CGG | + | 32556:2497-2516 | None:intergenic | 25.0% |
| AACACTATAGGAGAATCATT+TGG | + | 32556:2855-2874 | None:intergenic | 30.0% | |
| AATAAAGGATACCTGAAATC+TGG | + | 32556:2256-2275 | None:intergenic | 30.0% | |
| ATTACCATAAACTGCTCTAA+GGG | + | 32556:2220-2239 | None:intergenic | 30.0% | |
| CAATATACACATAGCTGAAA+AGG | - | 32556:1834-1853 | MS.gene035373:CDS | 30.0% | |
| GTAAGTTTATCTTCAACTCT+AGG | - | 32556:2974-2993 | MS.gene035373:intron | 30.0% | |
| TCTGTCAATTGCAATATTAC+AGG | - | 32556:2710-2729 | MS.gene035373:intron | 30.0% | |
| TGTCTCTATCAATGTTTCAT+AGG | - | 32556:3240-3259 | MS.gene035373:CDS | 30.0% | |
| !! | TCCAGTCTTGTTAAATTTAG+AGG | + | 32556:2916-2935 | None:intergenic | 30.0% |
| AGAGATTACATTCACAAAGG+TGG | - | 32556:3417-3436 | MS.gene035373:CDS | 35.0% | |
| AGTTCCAGTGAAGTTTATAG+TGG | - | 32556:3359-3378 | MS.gene035373:CDS | 35.0% | |
| ATCTAAGGGAGCTTATCTAT+AGG | + | 32556:2288-2307 | None:intergenic | 35.0% | |
| ATTCTTGTTGCAATAGCCAT+GGG | + | 32556:2881-2900 | None:intergenic | 35.0% | |
| CAAATGCAAGAGAAGCAATA+TGG | + | 32556:3294-3313 | None:intergenic | 35.0% | |
| CATTACCATAAACTGCTCTA+AGG | + | 32556:2221-2240 | None:intergenic | 35.0% | |
| CTACTATATCTCCAGATTTC+AGG | - | 32556:2242-2261 | MS.gene035373:intron | 35.0% | |
| CTCTTGCATTTGTAGAAACT+GGG | - | 32556:3302-3321 | MS.gene035373:CDS | 35.0% | |
| CTTTATCTACCTAAGGGTAA+AGG | - | 32556:2819-2838 | MS.gene035373:intron | 35.0% | |
| GAGATTACATTCACAAAGGT+GGG | - | 32556:3418-3437 | MS.gene035373:CDS | 35.0% | |
| GATAAGCTCCCTTAGATTTA+AGG | - | 32556:2291-2310 | MS.gene035373:intron | 35.0% | |
| GCAAGAGATTACATTCACAA+AGG | - | 32556:3414-3433 | MS.gene035373:CDS | 35.0% | |
| GCCTCTAAATTTAACAAGAC+TGG | - | 32556:2912-2931 | MS.gene035373:intron | 35.0% | |
| GTGTATATTGATGCCATTGA+CGG | + | 32556:1824-1843 | None:intergenic | 35.0% | |
| GTTCCAGTGAAGTTTATAGT+GGG | - | 32556:3360-3379 | MS.gene035373:CDS | 35.0% | |
| TCTAAGGGAGCTTATCTATA+GGG | + | 32556:2287-2306 | None:intergenic | 35.0% | |
| TCTCTTGCATTTGTAGAAAC+TGG | - | 32556:3301-3320 | MS.gene035373:CDS | 35.0% | |
| TTAACAAGACTGGATTCACA+GGG | - | 32556:2922-2941 | MS.gene035373:intron | 35.0% | |
| TTACCCTTAGGTAGATAAAG+TGG | + | 32556:2819-2838 | None:intergenic | 35.0% | |
| TTTAACAAGACTGGATTCAC+AGG | - | 32556:2921-2940 | MS.gene035373:intron | 35.0% | |
| ! | GTATCAAGAGGCTTTCTTTT+GGG | + | 32556:2198-2217 | None:intergenic | 35.0% |
| ! | TATCAAGAGGCTTTCTTTTG+GGG | + | 32556:2197-2216 | None:intergenic | 35.0% |
| ! | TGATCGGAATTTTCGAAATG+TGG | - | 32556:2599-2618 | MS.gene035373:CDS | 35.0% |
| !! | CATATCGTTGGTGATATCAT+CGG | - | 32556:2024-2043 | MS.gene035373:intron | 35.0% |
| !!! | GTGGATTGGTGTAGTTATTT+TGG | - | 32556:2655-2674 | MS.gene035373:intron | 35.0% |
| AACTCTGCTTCTATATCACC+AGG | + | 32556:2738-2757 | None:intergenic | 40.0% | |
| AAGCTAGATATGTGATCTGG+TGG | + | 32556:1918-1937 | None:intergenic | 40.0% | |
| ACAAGAGCCTTGATTCTTTC+AGG | + | 32556:2144-2163 | None:intergenic | 40.0% | |
| AGCTTATCTATAGGGACTGA+GGG | + | 32556:2279-2298 | None:intergenic | 40.0% | |
| AGGATGTGGTAGTAATCGAA+GGG | - | 32556:3466-3485 | MS.gene035373:CDS | 40.0% | |
| ATTGCAATATTACAGGAGCC+TGG | - | 32556:2717-2736 | MS.gene035373:intron | 40.0% | |
| CAAGAGCCTTGATTCTTTCA+GGG | + | 32556:2143-2162 | None:intergenic | 40.0% | |
| CAATCCACAAAAACTCAGCA+TGG | + | 32556:2643-2662 | None:intergenic | 40.0% | |
| CATGTTTGATCAGTAAGTGC+CGG | + | 32556:2546-2565 | None:intergenic | 40.0% | |
| CATTCTTGTTGCAATAGCCA+TGG | + | 32556:2882-2901 | None:intergenic | 40.0% | |
| CGATGATATCACCAACGATA+TGG | + | 32556:2026-2045 | None:intergenic | 40.0% | |
| GATACCCTTAGAGCAGTTTA+TGG | - | 32556:2213-2232 | MS.gene035373:intron | 40.0% | |
| GCACTTCATCCATCAAGAAA+GGG | - | 32556:3494-3513 | MS.gene035373:CDS | 40.0% | |
| GGAAAGATACCAAGCAGTAA+GGG | + | 32556:2112-2131 | None:intergenic | 40.0% | |
| GGTAAGTCAGAAATTCCTTC+AGG | + | 32556:2785-2804 | None:intergenic | 40.0% | |
| GGTCCACTTTATCTACCTAA+GGG | - | 32556:2813-2832 | MS.gene035373:intron | 40.0% | |
| TAACAAGACTGGATTCACAG+GGG | - | 32556:2923-2942 | MS.gene035373:intron | 40.0% | |
| TAGGTAGATAAAGTGGACCA+GGG | + | 32556:2812-2831 | None:intergenic | 40.0% | |
| TATAGGGACTGAGGGAATAA+AGG | + | 32556:2271-2290 | None:intergenic | 40.0% | |
| TCACCCACTATAAACTTCAC+TGG | + | 32556:3366-3385 | None:intergenic | 40.0% | |
| TCTTATCAGCCCTTTCTTGA+TGG | + | 32556:3506-3525 | None:intergenic | 40.0% | |
| TGATATCACCAACGATATGG+AGG | + | 32556:2023-2042 | None:intergenic | 40.0% | |
| TGCCATTGACGGTTACAATT+CGG | + | 32556:1813-1832 | None:intergenic | 40.0% | |
| TGGTCCACTTTATCTACCTA+AGG | - | 32556:2812-2831 | MS.gene035373:intron | 40.0% | |
| TGTCCAAAACCTTTACCCTT+AGG | + | 32556:2831-2850 | None:intergenic | 40.0% | |
| TTAGGTAGATAAAGTGGACC+AGG | + | 32556:2813-2832 | None:intergenic | 40.0% | |
| TTCTTGTTGCAATAGCCATG+GGG | + | 32556:2880-2899 | None:intergenic | 40.0% | |
| ! | ATCACATATCTAGCTTGCCA+TGG | - | 32556:1922-1941 | MS.gene035373:CDS | 40.0% |
| ! | CAATCCATGCTGAGTTTTTG+TGG | - | 32556:2636-2655 | MS.gene035373:intron | 40.0% |
| ! | CATGCTGAGTTTTTGTGGAT+TGG | - | 32556:2641-2660 | MS.gene035373:intron | 40.0% |
| ! | CTACCTAAGGGTAAAGGTTT+TGG | - | 32556:2825-2844 | MS.gene035373:intron | 40.0% |
| ! | GGAATTTTCGAAATGTGGAG+TGG | - | 32556:2604-2623 | MS.gene035373:intron | 40.0% |
| ! | GGTATCAAGAGGCTTTCTTT+TGG | + | 32556:2199-2218 | None:intergenic | 40.0% |
| !! | CAAGAGAAGGTGTTTGTTGT+GGG | - | 32556:2072-2091 | MS.gene035373:intron | 40.0% |
| !! | TCAAGAGAAGGTGTTTGTTG+TGG | - | 32556:2071-2090 | MS.gene035373:intron | 40.0% |
| CACATAGCTGAAAAGGGTCA+AGG | - | 32556:1841-1860 | MS.gene035373:CDS | 45.0% | |
| CACCGAATTGTAACCGTCAA+TGG | - | 32556:1808-1827 | MS.gene035373:CDS | 45.0% | |
| CATTGCTGGTGATCAAGAGA+AGG | - | 32556:2059-2078 | MS.gene035373:intron | 45.0% | |
| CGGCACTTACTGATCAAACA+TGG | - | 32556:2544-2563 | MS.gene035373:CDS | 45.0% | |
| CTATCGCCCTGAAAGAATCA+AGG | - | 32556:2134-2153 | MS.gene035373:intron | 45.0% | |
| CTTCTCTTGATCACCAGCAA+TGG | + | 32556:2061-2080 | None:intergenic | 45.0% | |
| GACCTTACCTATAATGCACC+TGG | - | 32556:3390-3409 | MS.gene035373:CDS | 45.0% | |
| GAGCTTATCTATAGGGACTG+AGG | + | 32556:2280-2299 | None:intergenic | 45.0% | |
| GAGGATGTGGTAGTAATCGA+AGG | - | 32556:3465-3484 | MS.gene035373:CDS | 45.0% | |
| GATTCTTTCAGGGCGATAGA+GGG | + | 32556:2133-2152 | None:intergenic | 45.0% | |
| GCCATGAATACCATAGGTCA+GGG | + | 32556:1894-1913 | None:intergenic | 45.0% | |
| GGATGTGGTAGTAATCGAAG+GGG | - | 32556:3467-3486 | MS.gene035373:CDS | 45.0% | |
| GGCAAGCTAGATATGTGATC+TGG | + | 32556:1921-1940 | None:intergenic | 45.0% | |
| GGCACTTCATCCATCAAGAA+AGG | - | 32556:3493-3512 | MS.gene035373:CDS | 45.0% | |
| GGGAAAGATACCAAGCAGTA+AGG | + | 32556:2113-2132 | None:intergenic | 45.0% | |
| TCCCTGACCTATGGTATTCA+TGG | - | 32556:1890-1909 | MS.gene035373:CDS | 45.0% | |
| TCTTGTTGCAATAGCCATGG+GGG | + | 32556:2879-2898 | None:intergenic | 45.0% | |
| TGAATGTAATCTCTTGCGCC+AGG | + | 32556:3411-3430 | None:intergenic | 45.0% | |
| TGATTCTTTCAGGGCGATAG+AGG | + | 32556:2134-2153 | None:intergenic | 45.0% | |
| TGGAACTGAAAGAGTCCTGA+AGG | - | 32556:2767-2786 | MS.gene035373:intron | 45.0% | |
| ! | TTTGTTGTGGGCCATGATTG+GGG | - | 32556:2084-2103 | MS.gene035373:intron | 45.0% |
| !! | ACTGCTCTAAGGGTATCAAG+AGG | + | 32556:2210-2229 | None:intergenic | 45.0% |
| !! | GAAGCAGAGTTTGCTGAGAT+TGG | - | 32556:2747-2766 | MS.gene035373:intron | 45.0% |
| !! | GTTTGTTGTGGGCCATGATT+GGG | - | 32556:2083-2102 | MS.gene035373:intron | 45.0% |
| !! | TGTTTGTTGTGGGCCATGAT+TGG | - | 32556:2082-2101 | MS.gene035373:intron | 45.0% |
| !!! | GGCTTTCTTTTGGGGTTTCT+AGG | + | 32556:2189-2208 | None:intergenic | 45.0% |
| AACGATATGGAGGCTCGTGT+AGG | + | 32556:2013-2032 | None:intergenic | 50.0% | |
| ACTACCACATCCTCCAGAAG+TGG | + | 32556:3459-3478 | None:intergenic | 50.0% | |
| AGCCATGGATGAAGAGGATG+AGG | + | 32556:1870-1889 | None:intergenic | 50.0% | |
| CCATGGATGAAGAGGATGAG+GGG | + | 32556:1868-1887 | None:intergenic | 50.0% | |
| CGCCAGGTGCATTATAGGTA+AGG | + | 32556:3395-3414 | None:intergenic | 50.0% | |
| CGCCATGAATACCATAGGTC+AGG | + | 32556:1895-1914 | None:intergenic | 50.0% | |
| GATAAAGTGGACCAGGGTTG+CGG | + | 32556:2806-2825 | None:intergenic | 50.0% | |
| GCCATGGATGAAGAGGATGA+GGG | + | 32556:1869-1888 | None:intergenic | 50.0% | |
| TACACGAGCCTCCATATCGT+TGG | - | 32556:2012-2031 | MS.gene035373:CDS | 50.0% | |
| TATCAGTGTCTCCGTATCCG+CGG | + | 32556:1972-1991 | None:intergenic | 50.0% | |
| TCTTGCGCCAGGTGCATTAT+AGG | + | 32556:3400-3419 | None:intergenic | 50.0% | |
| TGGTAGTAATCGAAGGGGCA+GGG | - | 32556:3472-3491 | MS.gene035373:CDS | 50.0% | |
| TTGCCATGGTTACCGTTGTG+TGG | - | 32556:1936-1955 | MS.gene035373:CDS | 50.0% | |
| TTTCTGACTTACCGCAACCC+TGG | - | 32556:2792-2811 | MS.gene035373:intron | 50.0% | |
| ! | TTGACTTGAGCACCAGTCCA+TGG | + | 32556:3339-3358 | None:intergenic | 50.0% |
| !! | GAAGAGAGATGTGCCACTTC+TGG | - | 32556:3443-3462 | MS.gene035373:CDS | 50.0% |
| ACCATAGGTCAGGGAAGCCA+TGG | + | 32556:1885-1904 | None:intergenic | 55.0% | |
| ACTGGGAGCTCAATGCTCCA+TGG | - | 32556:3319-3338 | MS.gene035373:CDS | 55.0% | |
| AGCCATGGGGGCAACACTAT+AGG | + | 32556:2867-2886 | None:intergenic | 55.0% | |
| CAGGGAAGCCATGGATGAAG+AGG | + | 32556:1876-1895 | None:intergenic | 55.0% | |
| CCCCTCATCCTCTTCATCCA+TGG | - | 32556:1865-1884 | MS.gene035373:CDS | 55.0% | |
| CTCCTATAGTGTTGCCCCCA+TGG | - | 32556:2862-2881 | MS.gene035373:intron | 55.0% | |
| GAGCTCAATGCTCCATGGAC+TGG | - | 32556:3324-3343 | MS.gene035373:CDS | 55.0% | |
| GGACTTCTTGACGCCATTGC+TGG | - | 32556:2045-2064 | MS.gene035373:intron | 55.0% | |
| GGTGGCGCCATGAATACCAT+AGG | + | 32556:1900-1919 | None:intergenic | 55.0% | |
| GTGGTAGTAATCGAAGGGGC+AGG | - | 32556:3471-3490 | MS.gene035373:CDS | 55.0% | |
| TCCATGGCTTCCCTGACCTA+TGG | - | 32556:1881-1900 | MS.gene035373:CDS | 55.0% | |
| TGGAGGCTCGTGTAGGATGT+CGG | + | 32556:2006-2025 | None:intergenic | 55.0% | |
| ! | ATTGGGGTGCCCTTACTGCT+TGG | - | 32556:2100-2119 | MS.gene035373:intron | 55.0% |
| !! | CAGTAAGGGCACCCCAATCA+TGG | + | 32556:2098-2117 | None:intergenic | 55.0% |
| !! | GAGAGATGTGCCACTTCTGG+AGG | - | 32556:3446-3465 | MS.gene035373:CDS | 55.0% |
| !! | TGTGCCACTTCTGGAGGATG+TGG | - | 32556:3452-3471 | MS.gene035373:CDS | 55.0% |
| GCTCGTGTAGGATGTCGGTG+AGG | + | 32556:2001-2020 | None:intergenic | 60.0% | |
| GGGCCACACAACGGTAACCA+TGG | + | 32556:1942-1961 | None:intergenic | 60.0% | |
| GTGTAGGATGTCGGTGAGGC+TGG | + | 32556:1997-2016 | None:intergenic | 60.0% | |
| TCTCCGTATCCGCGGAGATC+CGG | + | 32556:1964-1983 | None:intergenic | 60.0% | |
| TGGTTACCGTTGTGTGGCCC+CGG | - | 32556:1942-1961 | MS.gene035373:CDS | 60.0% | |
| CTCCGTATCCGCGGAGATCC+GGG | + | 32556:1963-1982 | None:intergenic | 65.0% | |
| GGAGATCCGGGGCCACACAA+CGG | + | 32556:1951-1970 | None:intergenic | 65.0% | |
| TCCGTATCCGCGGAGATCCG+GGG | + | 32556:1962-1981 | None:intergenic | 65.0% | |
| GCCCCGGATCTCCGCGGATA+CGG | - | 32556:1958-1977 | MS.gene035373:CDS | 70.0% | |
| TGTGTGGCCCCGGATCTCCG+CGG | - | 32556:1952-1971 | MS.gene035373:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 32556 | gene | 1787 | 3563 | 1787 | ID=MS.gene035373 |
| 32556 | mRNA | 1787 | 3563 | 1787 | ID=MS.gene035373.t1;Parent=MS.gene035373 |
| 32556 | exon | 3087 | 3563 | 3087 | ID=MS.gene035373.t1.exon1;Parent=MS.gene035373.t1 |
| 32556 | CDS | 3087 | 3563 | 3087 | ID=cds.MS.gene035373.t1;Parent=MS.gene035373.t1 |
| 32556 | exon | 2377 | 2618 | 2377 | ID=MS.gene035373.t1.exon2;Parent=MS.gene035373.t1 |
| 32556 | CDS | 2377 | 2618 | 2377 | ID=cds.MS.gene035373.t1;Parent=MS.gene035373.t1 |
| 32556 | exon | 1787 | 2033 | 1787 | ID=MS.gene035373.t1.exon3;Parent=MS.gene035373.t1 |
| 32556 | CDS | 1787 | 2033 | 1787 | ID=cds.MS.gene035373.t1;Parent=MS.gene035373.t1 |
| Gene Sequence |
| Protein sequence |
