Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035369.t1 | KEH32298.1 | 89.1 | 321 | 25 | 1 | 1 | 311 | 35 | 355 | 6.10E-170 | 606.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035369.t1 | I6YGS0 | 34.2 | 319 | 180 | 7 | 9 | 307 | 7 | 315 | 6.7e-48 | 192.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035369.t1 | A0A072UTA2 | 89.1 | 321 | 25 | 1 | 1 | 311 | 35 | 355 | 4.4e-170 | 606.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035369.t1 | MTR_4g120240 | 89.097 | 321 | 25 | 1 | 1 | 311 | 35 | 355 | 0.0 | 589 |
| MS.gene035369.t1 | MTR_7g108825 | 56.426 | 319 | 127 | 2 | 3 | 311 | 1 | 317 | 1.54e-130 | 374 |
| MS.gene035369.t1 | MTR_7g113030 | 56.698 | 321 | 125 | 4 | 3 | 311 | 1 | 319 | 5.37e-130 | 373 |
| MS.gene035369.t1 | MTR_7g112970 | 56.875 | 320 | 123 | 4 | 3 | 311 | 1 | 316 | 9.74e-130 | 372 |
| MS.gene035369.t1 | MTR_7g113050 | 56.075 | 321 | 127 | 4 | 3 | 311 | 1 | 319 | 4.67e-129 | 370 |
| MS.gene035369.t1 | MTR_7g113020 | 56.790 | 324 | 120 | 5 | 3 | 311 | 1 | 319 | 1.38e-128 | 369 |
| MS.gene035369.t1 | MTR_7g112960 | 57.321 | 321 | 123 | 4 | 3 | 311 | 1 | 319 | 2.58e-127 | 366 |
| MS.gene035369.t1 | MTR_7g112615 | 55.452 | 321 | 129 | 4 | 3 | 311 | 1 | 319 | 1.86e-126 | 364 |
| MS.gene035369.t1 | MTR_7g112963 | 56.481 | 324 | 121 | 5 | 3 | 311 | 1 | 319 | 1.88e-126 | 364 |
| MS.gene035369.t1 | MTR_7g112620 | 54.829 | 321 | 131 | 4 | 3 | 311 | 1 | 319 | 7.81e-125 | 360 |
| MS.gene035369.t1 | MTR_4g005160 | 53.395 | 324 | 134 | 5 | 3 | 311 | 1 | 322 | 2.38e-119 | 346 |
| MS.gene035369.t1 | MTR_7g113010 | 56.890 | 283 | 108 | 4 | 3 | 273 | 1 | 281 | 2.14e-107 | 325 |
| MS.gene035369.t1 | MTR_8g076680 | 44.860 | 321 | 163 | 4 | 1 | 311 | 1 | 317 | 4.43e-94 | 281 |
| MS.gene035369.t1 | MTR_7g113050 | 56.250 | 240 | 91 | 4 | 3 | 230 | 1 | 238 | 8.46e-91 | 270 |
| MS.gene035369.t1 | MTR_7g112615 | 54.583 | 240 | 95 | 4 | 3 | 230 | 1 | 238 | 5.23e-87 | 261 |
| MS.gene035369.t1 | MTR_7g108825 | 52.941 | 238 | 100 | 2 | 3 | 230 | 1 | 236 | 1.29e-84 | 254 |
| MS.gene035369.t1 | MTR_8g076680 | 45.833 | 240 | 118 | 2 | 1 | 230 | 1 | 238 | 3.78e-70 | 218 |
| MS.gene035369.t1 | MTR_7g112615 | 63.504 | 137 | 47 | 2 | 3 | 138 | 1 | 135 | 1.19e-57 | 184 |
| MS.gene035369.t1 | MTR_1g083480 | 64.062 | 128 | 44 | 1 | 3 | 130 | 1 | 126 | 2.44e-57 | 183 |
| MS.gene035369.t1 | MTR_2g090240 | 33.962 | 318 | 192 | 9 | 3 | 310 | 1 | 310 | 8.51e-57 | 186 |
| MS.gene035369.t1 | MTR_2g090245 | 34.906 | 318 | 189 | 9 | 3 | 310 | 1 | 310 | 1.18e-55 | 183 |
| MS.gene035369.t1 | MTR_4g089060 | 34.579 | 321 | 185 | 12 | 3 | 310 | 1 | 309 | 2.00e-52 | 174 |
| MS.gene035369.t1 | MTR_4g089040 | 32.595 | 316 | 198 | 7 | 3 | 310 | 1 | 309 | 8.45e-51 | 170 |
| MS.gene035369.t1 | MTR_4g089060 | 31.884 | 345 | 189 | 10 | 3 | 310 | 1 | 336 | 3.75e-49 | 167 |
| MS.gene035369.t1 | MTR_4g089060 | 35.345 | 232 | 133 | 8 | 3 | 223 | 1 | 226 | 6.69e-40 | 140 |
| MS.gene035369.t1 | MTR_7g112910 | 37.815 | 238 | 100 | 7 | 76 | 311 | 4 | 195 | 2.81e-39 | 137 |
| MS.gene035369.t1 | MTR_3g024250 | 57.778 | 90 | 36 | 1 | 49 | 138 | 3 | 90 | 9.84e-28 | 105 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035369.t1 | AT4G15960 | 53.963 | 328 | 130 | 3 | 2 | 311 | 50 | 374 | 1.94e-131 | 379 |
| MS.gene035369.t1 | AT4G02340 | 54.348 | 322 | 128 | 4 | 3 | 311 | 1 | 316 | 7.11e-131 | 375 |
| MS.gene035369.t1 | AT3G05600 | 52.469 | 324 | 139 | 3 | 3 | 311 | 1 | 324 | 7.22e-124 | 358 |
| MS.gene035369.t1 | AT2G26740 | 53.106 | 322 | 134 | 4 | 6 | 311 | 1 | 321 | 1.96e-113 | 331 |
| MS.gene035369.t1 | AT2G26750 | 51.090 | 321 | 141 | 3 | 6 | 311 | 1 | 320 | 4.20e-110 | 322 |
| MS.gene035369.t1 | AT4G15955 | 50.955 | 314 | 130 | 4 | 7 | 311 | 6 | 304 | 6.69e-108 | 316 |
| MS.gene035369.t1 | AT3G51000 | 43.789 | 322 | 160 | 6 | 5 | 311 | 4 | 319 | 5.64e-89 | 269 |
| MS.gene035369.t1 | AT3G05600 | 51.440 | 243 | 103 | 3 | 3 | 230 | 1 | 243 | 1.01e-83 | 253 |
| MS.gene035369.t1 | AT4G15955 | 54.598 | 174 | 60 | 3 | 7 | 161 | 6 | 179 | 3.17e-61 | 193 |
| MS.gene035369.t1 | AT4G15955 | 53.846 | 169 | 69 | 2 | 7 | 166 | 6 | 174 | 6.02e-59 | 187 |
Find 0 sgRNAs with CRISPR-Local
Find 151 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATCAAATTTATCTCAT+TGG | + | 32561:4203-4222 | None:intergenic | 15.0% |
| !!! | CTAAATAGTTTTGAATTTTT+TGG | - | 32561:3368-3387 | MS.gene035369:intron | 15.0% |
| !!! | TTTTTTTACAGTAAAATCTA+TGG | - | 32561:4053-4072 | MS.gene035369:intron | 15.0% |
| !! | ATTTGATCAAGTAAATACTA+AGG | + | 32561:3347-3366 | None:intergenic | 20.0% |
| !! | TAATGAGTTAGTAAGAAATA+TGG | - | 32561:4151-4170 | MS.gene035369:CDS | 20.0% |
| !! | TTTGATCAAGTAAATACTAA+GGG | + | 32561:3346-3365 | None:intergenic | 20.0% |
| !!! | AATTTTTTAATTGAGCAAAC+CGG | - | 32561:3527-3546 | MS.gene035369:CDS | 20.0% |
| !!! | TTTACTTTGAAAATCATGAT+CGG | - | 32561:3586-3605 | MS.gene035369:CDS | 20.0% |
| ! | AATATACACATAGCTGAAAA+GGG | - | 32561:2839-2858 | MS.gene035369:CDS | 25.0% |
| ! | ATGTACAAACCTTAAATCTA+AGG | + | 32561:3306-3325 | None:intergenic | 25.0% |
| ! | TGTACAAACCTTAAATCTAA+GGG | + | 32561:3305-3324 | None:intergenic | 25.0% |
| ! | TTTACAGTAAAATCTATGGA+GGG | - | 32561:4057-4076 | MS.gene035369:intron | 25.0% |
| !! | CAAAGATATATTGTTCTAAG+TGG | - | 32561:3685-3704 | MS.gene035369:intron | 25.0% |
| !! | TTTTACAGTAAAATCTATGG+AGG | - | 32561:4056-4075 | MS.gene035369:intron | 25.0% |
| !!! | TTTTTTCAGATGTCTACTTT+CGG | + | 32561:3500-3519 | None:intergenic | 25.0% |
| AACACTATAGGAGAATCATT+TGG | + | 32561:3858-3877 | None:intergenic | 30.0% | |
| AATAAAGGATACCTGAAATC+TGG | + | 32561:3259-3278 | None:intergenic | 30.0% | |
| ATTACCATAAACTGCTCTAA+GGG | + | 32561:3223-3242 | None:intergenic | 30.0% | |
| CAATATACACATAGCTGAAA+AGG | - | 32561:2838-2857 | MS.gene035369:CDS | 30.0% | |
| GTAAGTTTATCTTCAACTCT+AGG | - | 32561:3977-3996 | MS.gene035369:intron | 30.0% | |
| TCTGTCAATTGCAATATTAC+AGG | - | 32561:3713-3732 | MS.gene035369:intron | 30.0% | |
| TGTCTCTATCAATGTTTCAT+AGG | - | 32561:4243-4262 | MS.gene035369:CDS | 30.0% | |
| !! | TCCAGTCTTGTTAAATTTAG+AGG | + | 32561:3919-3938 | None:intergenic | 30.0% |
| AGAGATTACATTCACAAAGG+TGG | - | 32561:4420-4439 | MS.gene035369:CDS | 35.0% | |
| AGTTCCAGTGAAGTTTATAG+TGG | - | 32561:4362-4381 | MS.gene035369:CDS | 35.0% | |
| ATCTAAGGGAGCTTATCTAT+AGG | + | 32561:3291-3310 | None:intergenic | 35.0% | |
| ATTCTTGTTGCAATAGCCAT+GGG | + | 32561:3884-3903 | None:intergenic | 35.0% | |
| CAAATGCAAGAGAAGCAATA+TGG | + | 32561:4297-4316 | None:intergenic | 35.0% | |
| CATTACCATAAACTGCTCTA+AGG | + | 32561:3224-3243 | None:intergenic | 35.0% | |
| CTACTATATCTCCAGATTTC+AGG | - | 32561:3245-3264 | MS.gene035369:intron | 35.0% | |
| CTCTTGCATTTGTAGAAACT+GGG | - | 32561:4305-4324 | MS.gene035369:CDS | 35.0% | |
| CTTTATCTACCTAAGGGTAA+AGG | - | 32561:3822-3841 | MS.gene035369:intron | 35.0% | |
| GAGATTACATTCACAAAGGT+GGG | - | 32561:4421-4440 | MS.gene035369:CDS | 35.0% | |
| GATAAGCTCCCTTAGATTTA+AGG | - | 32561:3294-3313 | MS.gene035369:intron | 35.0% | |
| GCAAGAGATTACATTCACAA+AGG | - | 32561:4417-4436 | MS.gene035369:CDS | 35.0% | |
| GCCTCTAAATTTAACAAGAC+TGG | - | 32561:3915-3934 | MS.gene035369:intron | 35.0% | |
| GTGTATATTGATGCCATTGA+CGG | + | 32561:2828-2847 | None:intergenic | 35.0% | |
| GTTCCAGTGAAGTTTATAGT+GGG | - | 32561:4363-4382 | MS.gene035369:CDS | 35.0% | |
| TCTAAGGGAGCTTATCTATA+GGG | + | 32561:3290-3309 | None:intergenic | 35.0% | |
| TCTCTTGCATTTGTAGAAAC+TGG | - | 32561:4304-4323 | MS.gene035369:CDS | 35.0% | |
| TTAACAAGACTGGATTCACA+GGG | - | 32561:3925-3944 | MS.gene035369:intron | 35.0% | |
| TTACCCTTAGGTAGATAAAG+TGG | + | 32561:3822-3841 | None:intergenic | 35.0% | |
| TTTAACAAGACTGGATTCAC+AGG | - | 32561:3924-3943 | MS.gene035369:intron | 35.0% | |
| ! | GTATCAAGAGGCTTTCTTTT+GGG | + | 32561:3201-3220 | None:intergenic | 35.0% |
| ! | TATCAAGAGGCTTTCTTTTG+GGG | + | 32561:3200-3219 | None:intergenic | 35.0% |
| ! | TGATCGGAATTTTCGAAATG+TGG | - | 32561:3602-3621 | MS.gene035369:CDS | 35.0% |
| !! | CATATCGTTGGTGATATCAT+CGG | - | 32561:3028-3047 | MS.gene035369:intron | 35.0% |
| !!! | GTGGATTGGTGTAGTTATTT+TGG | - | 32561:3658-3677 | MS.gene035369:intron | 35.0% |
| AACTCTGCTTCTATATCACC+AGG | + | 32561:3741-3760 | None:intergenic | 40.0% | |
| AAGCTAGATATGTGATCTGG+TGG | + | 32561:2922-2941 | None:intergenic | 40.0% | |
| ACAAGAGCCTTGATTCTTTC+AGG | + | 32561:3148-3167 | None:intergenic | 40.0% | |
| AGCTTATCTATAGGGACTGA+GGG | + | 32561:3282-3301 | None:intergenic | 40.0% | |
| AGGATGTGGTAGTAATCGAA+GGG | - | 32561:4469-4488 | MS.gene035369:CDS | 40.0% | |
| ATTGCAATATTACAGGAGCC+TGG | - | 32561:3720-3739 | MS.gene035369:intron | 40.0% | |
| CAAGAGCCTTGATTCTTTCA+GGG | + | 32561:3147-3166 | None:intergenic | 40.0% | |
| CAATCCACAAAAACTCAGCA+TGG | + | 32561:3646-3665 | None:intergenic | 40.0% | |
| CATGTTTGATCAGTAAGTGC+CGG | + | 32561:3549-3568 | None:intergenic | 40.0% | |
| CATTCTTGTTGCAATAGCCA+TGG | + | 32561:3885-3904 | None:intergenic | 40.0% | |
| CGATGATATCACCAACGATA+TGG | + | 32561:3030-3049 | None:intergenic | 40.0% | |
| GATACCCTTAGAGCAGTTTA+TGG | - | 32561:3216-3235 | MS.gene035369:intron | 40.0% | |
| GCACTTCATCCATCAAGAAA+GGG | - | 32561:4497-4516 | MS.gene035369:CDS | 40.0% | |
| GGAAAGATACCAAGCAGTAA+GGG | + | 32561:3116-3135 | None:intergenic | 40.0% | |
| GGTAAGTCAGAAATTCCTTC+AGG | + | 32561:3788-3807 | None:intergenic | 40.0% | |
| GGTCCACTTTATCTACCTAA+GGG | - | 32561:3816-3835 | MS.gene035369:intron | 40.0% | |
| TAACAAGACTGGATTCACAG+GGG | - | 32561:3926-3945 | MS.gene035369:intron | 40.0% | |
| TAGGTAGATAAAGTGGACCA+GGG | + | 32561:3815-3834 | None:intergenic | 40.0% | |
| TATAGGGACTGAGGGAATAA+AGG | + | 32561:3274-3293 | None:intergenic | 40.0% | |
| TCACCCACTATAAACTTCAC+TGG | + | 32561:4369-4388 | None:intergenic | 40.0% | |
| TCTTATCAGCCCTTTCTTGA+TGG | + | 32561:4509-4528 | None:intergenic | 40.0% | |
| TGATATCACCAACGATATGG+AGG | + | 32561:3027-3046 | None:intergenic | 40.0% | |
| TGCCATTGACGGTTACAATT+CGG | + | 32561:2817-2836 | None:intergenic | 40.0% | |
| TGGTCCACTTTATCTACCTA+AGG | - | 32561:3815-3834 | MS.gene035369:intron | 40.0% | |
| TGTCCAAAACCTTTACCCTT+AGG | + | 32561:3834-3853 | None:intergenic | 40.0% | |
| TTAGGTAGATAAAGTGGACC+AGG | + | 32561:3816-3835 | None:intergenic | 40.0% | |
| TTCTTGTTGCAATAGCCATG+GGG | + | 32561:3883-3902 | None:intergenic | 40.0% | |
| ! | ATCACATATCTAGCTTGCCA+TGG | - | 32561:2926-2945 | MS.gene035369:CDS | 40.0% |
| ! | CAATCCATGCTGAGTTTTTG+TGG | - | 32561:3639-3658 | MS.gene035369:intron | 40.0% |
| ! | CATGCTGAGTTTTTGTGGAT+TGG | - | 32561:3644-3663 | MS.gene035369:intron | 40.0% |
| ! | CTACCTAAGGGTAAAGGTTT+TGG | - | 32561:3828-3847 | MS.gene035369:intron | 40.0% |
| ! | GGAATTTTCGAAATGTGGAG+TGG | - | 32561:3607-3626 | MS.gene035369:intron | 40.0% |
| ! | GGTATCAAGAGGCTTTCTTT+TGG | + | 32561:3202-3221 | None:intergenic | 40.0% |
| !! | CAAGAGAAGGTGTTTGTTGT+GGG | - | 32561:3076-3095 | MS.gene035369:intron | 40.0% |
| !! | TCAAGAGAAGGTGTTTGTTG+TGG | - | 32561:3075-3094 | MS.gene035369:intron | 40.0% |
| CACATAGCTGAAAAGGGTCA+AGG | - | 32561:2845-2864 | MS.gene035369:CDS | 45.0% | |
| CACCGAATTGTAACCGTCAA+TGG | - | 32561:2812-2831 | MS.gene035369:CDS | 45.0% | |
| CATTGCTGGTGATCAAGAGA+AGG | - | 32561:3063-3082 | MS.gene035369:intron | 45.0% | |
| CGGCACTTACTGATCAAACA+TGG | - | 32561:3547-3566 | MS.gene035369:CDS | 45.0% | |
| CTATCGCCCTGAAAGAATCA+AGG | - | 32561:3138-3157 | MS.gene035369:intron | 45.0% | |
| CTTCTCTTGATCACCAGCAA+TGG | + | 32561:3065-3084 | None:intergenic | 45.0% | |
| GACCTTACCTATAATGCACC+TGG | - | 32561:4393-4412 | MS.gene035369:CDS | 45.0% | |
| GAGCTTATCTATAGGGACTG+AGG | + | 32561:3283-3302 | None:intergenic | 45.0% | |
| GAGGATGTGGTAGTAATCGA+AGG | - | 32561:4468-4487 | MS.gene035369:CDS | 45.0% | |
| GATTCTTTCAGGGCGATAGA+GGG | + | 32561:3137-3156 | None:intergenic | 45.0% | |
| GCCATGAATACCATAGGTCA+GGG | + | 32561:2898-2917 | None:intergenic | 45.0% | |
| GGATGTGGTAGTAATCGAAG+GGG | - | 32561:4470-4489 | MS.gene035369:CDS | 45.0% | |
| GGCAAGCTAGATATGTGATC+TGG | + | 32561:2925-2944 | None:intergenic | 45.0% | |
| GGCACTTCATCCATCAAGAA+AGG | - | 32561:4496-4515 | MS.gene035369:CDS | 45.0% | |
| GGGAAAGATACCAAGCAGTA+AGG | + | 32561:3117-3136 | None:intergenic | 45.0% | |
| TCCCTGACCTATGGTATTCA+TGG | - | 32561:2894-2913 | MS.gene035369:CDS | 45.0% | |
| TCTTGTTGCAATAGCCATGG+GGG | + | 32561:3882-3901 | None:intergenic | 45.0% | |
| TGAATGTAATCTCTTGCGCC+AGG | + | 32561:4414-4433 | None:intergenic | 45.0% | |
| TGATTCTTTCAGGGCGATAG+AGG | + | 32561:3138-3157 | None:intergenic | 45.0% | |
| TGGAACTGAAAGAGTCCTGA+AGG | - | 32561:3770-3789 | MS.gene035369:intron | 45.0% | |
| ! | TTTGTTGTGGGCCATGATTG+GGG | - | 32561:3088-3107 | MS.gene035369:intron | 45.0% |
| !! | ACTGCTCTAAGGGTATCAAG+AGG | + | 32561:3213-3232 | None:intergenic | 45.0% |
| !! | GAAGCAGAGTTTGCTGAGAT+TGG | - | 32561:3750-3769 | MS.gene035369:intron | 45.0% |
| !! | GTTTGTTGTGGGCCATGATT+GGG | - | 32561:3087-3106 | MS.gene035369:intron | 45.0% |
| !! | TGTTTGTTGTGGGCCATGAT+TGG | - | 32561:3086-3105 | MS.gene035369:intron | 45.0% |
| !!! | GGCTTTCTTTTGGGGTTTCT+AGG | + | 32561:3192-3211 | None:intergenic | 45.0% |
| AACGATATGGAGGCTCGTGT+AGG | + | 32561:3017-3036 | None:intergenic | 50.0% | |
| ACTACCACATCCTCCAGAAG+TGG | + | 32561:4462-4481 | None:intergenic | 50.0% | |
| AGCCATGGATGAAGAGGATG+AGG | + | 32561:2874-2893 | None:intergenic | 50.0% | |
| CCATGGATGAAGAGGATGAG+GGG | + | 32561:2872-2891 | None:intergenic | 50.0% | |
| CGCCAGGTGCATTATAGGTA+AGG | + | 32561:4398-4417 | None:intergenic | 50.0% | |
| CGCCATGAATACCATAGGTC+AGG | + | 32561:2899-2918 | None:intergenic | 50.0% | |
| GATAAAGTGGACCAGGGTTG+CGG | + | 32561:3809-3828 | None:intergenic | 50.0% | |
| GCCATGGATGAAGAGGATGA+GGG | + | 32561:2873-2892 | None:intergenic | 50.0% | |
| TACACGAGCCTCCATATCGT+TGG | - | 32561:3016-3035 | MS.gene035369:CDS | 50.0% | |
| TATCAGTGTCTCCGTATCCG+CGG | + | 32561:2976-2995 | None:intergenic | 50.0% | |
| TCTTGCGCCAGGTGCATTAT+AGG | + | 32561:4403-4422 | None:intergenic | 50.0% | |
| TGGTAGTAATCGAAGGGGCA+GGG | - | 32561:4475-4494 | MS.gene035369:CDS | 50.0% | |
| TTGCCATGGTTACCGTTGTG+TGG | - | 32561:2940-2959 | MS.gene035369:CDS | 50.0% | |
| TTTCTGACTTACCGCAACCC+TGG | - | 32561:3795-3814 | MS.gene035369:intron | 50.0% | |
| ! | TTGACTTGAGCACCAGTCCA+TGG | + | 32561:4342-4361 | None:intergenic | 50.0% |
| !! | GAAGAGAGATGTGCCACTTC+TGG | - | 32561:4446-4465 | MS.gene035369:CDS | 50.0% |
| ACCATAGGTCAGGGAAGCCA+TGG | + | 32561:2889-2908 | None:intergenic | 55.0% | |
| ACTGGGAGCTCAATGCTCCA+TGG | - | 32561:4322-4341 | MS.gene035369:CDS | 55.0% | |
| AGCCATGGGGGCAACACTAT+AGG | + | 32561:3870-3889 | None:intergenic | 55.0% | |
| CAGGGAAGCCATGGATGAAG+AGG | + | 32561:2880-2899 | None:intergenic | 55.0% | |
| CCCCTCATCCTCTTCATCCA+TGG | - | 32561:2869-2888 | MS.gene035369:CDS | 55.0% | |
| CTCCTATAGTGTTGCCCCCA+TGG | - | 32561:3865-3884 | MS.gene035369:intron | 55.0% | |
| GAGCTCAATGCTCCATGGAC+TGG | - | 32561:4327-4346 | MS.gene035369:CDS | 55.0% | |
| GGACTTCTTGACGCCATTGC+TGG | - | 32561:3049-3068 | MS.gene035369:intron | 55.0% | |
| GGTGGCGCCATGAATACCAT+AGG | + | 32561:2904-2923 | None:intergenic | 55.0% | |
| GTGGTAGTAATCGAAGGGGC+AGG | - | 32561:4474-4493 | MS.gene035369:CDS | 55.0% | |
| TCCATGGCTTCCCTGACCTA+TGG | - | 32561:2885-2904 | MS.gene035369:CDS | 55.0% | |
| TGGAGGCTCGTGTAGGATGT+CGG | + | 32561:3010-3029 | None:intergenic | 55.0% | |
| ! | ATTGGGGTGCCCTTACTGCT+TGG | - | 32561:3104-3123 | MS.gene035369:intron | 55.0% |
| !! | CAGTAAGGGCACCCCAATCA+TGG | + | 32561:3102-3121 | None:intergenic | 55.0% |
| !! | GAGAGATGTGCCACTTCTGG+AGG | - | 32561:4449-4468 | MS.gene035369:CDS | 55.0% |
| !! | TGTGCCACTTCTGGAGGATG+TGG | - | 32561:4455-4474 | MS.gene035369:CDS | 55.0% |
| GCTCGTGTAGGATGTCGGTG+AGG | + | 32561:3005-3024 | None:intergenic | 60.0% | |
| GGGCCACACAACGGTAACCA+TGG | + | 32561:2946-2965 | None:intergenic | 60.0% | |
| GTGTAGGATGTCGGTGAGGC+TGG | + | 32561:3001-3020 | None:intergenic | 60.0% | |
| TCTCCGTATCCGCGGAGATC+CGG | + | 32561:2968-2987 | None:intergenic | 60.0% | |
| TGGTTACCGTTGTGTGGCCC+CGG | - | 32561:2946-2965 | MS.gene035369:CDS | 60.0% | |
| CTCCGTATCCGCGGAGATCC+GGG | + | 32561:2967-2986 | None:intergenic | 65.0% | |
| GGAGATCCGGGGCCACACAA+CGG | + | 32561:2955-2974 | None:intergenic | 65.0% | |
| TCCGTATCCGCGGAGATCCG+GGG | + | 32561:2966-2985 | None:intergenic | 65.0% | |
| GCCCCGGATCTCCGCGGATA+CGG | - | 32561:2962-2981 | MS.gene035369:CDS | 70.0% | |
| TGTGTGGCCCCGGATCTCCG+CGG | - | 32561:2956-2975 | MS.gene035369:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 32561 | gene | 2791 | 4566 | 2791 | ID=MS.gene035369 |
| 32561 | mRNA | 2791 | 4566 | 2791 | ID=MS.gene035369.t1;Parent=MS.gene035369 |
| 32561 | exon | 4120 | 4566 | 4120 | ID=MS.gene035369.t1.exon1;Parent=MS.gene035369.t1 |
| 32561 | CDS | 4120 | 4566 | 4120 | ID=cds.MS.gene035369.t1;Parent=MS.gene035369.t1 |
| 32561 | exon | 3381 | 3622 | 3381 | ID=MS.gene035369.t1.exon2;Parent=MS.gene035369.t1 |
| 32561 | CDS | 3381 | 3622 | 3381 | ID=cds.MS.gene035369.t1;Parent=MS.gene035369.t1 |
| 32561 | exon | 2791 | 3037 | 2791 | ID=MS.gene035369.t1.exon3;Parent=MS.gene035369.t1 |
| 32561 | CDS | 2791 | 3037 | 2791 | ID=cds.MS.gene035369.t1;Parent=MS.gene035369.t1 |
| Gene Sequence |
| Protein sequence |
