Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066361.t1 | KEH32298.1 | 96.6 | 321 | 11 | 0 | 1 | 321 | 35 | 355 | 5.50E-190 | 673.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066361.t1 | I6YGS0 | 36.2 | 320 | 182 | 7 | 9 | 317 | 7 | 315 | 4.9e-54 | 213.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066361.t1 | A0A072UTA2 | 96.6 | 321 | 11 | 0 | 1 | 321 | 35 | 355 | 4.0e-190 | 673.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066361.t1 | MTR_4g120240 | 96.573 | 321 | 11 | 0 | 1 | 321 | 35 | 355 | 0.0 | 649 |
| MS.gene066361.t1 | MTR_7g108825 | 61.129 | 319 | 122 | 1 | 3 | 321 | 1 | 317 | 3.17e-148 | 419 |
| MS.gene066361.t1 | MTR_7g112970 | 61.250 | 320 | 119 | 3 | 3 | 321 | 1 | 316 | 5.11e-148 | 419 |
| MS.gene066361.t1 | MTR_7g113020 | 61.994 | 321 | 118 | 3 | 3 | 321 | 1 | 319 | 2.17e-146 | 415 |
| MS.gene066361.t1 | MTR_7g112960 | 61.682 | 321 | 119 | 3 | 3 | 321 | 1 | 319 | 6.34e-146 | 414 |
| MS.gene066361.t1 | MTR_7g112963 | 61.371 | 321 | 120 | 3 | 3 | 321 | 1 | 319 | 1.35e-145 | 413 |
| MS.gene066361.t1 | MTR_7g113050 | 60.125 | 321 | 124 | 3 | 3 | 321 | 1 | 319 | 2.62e-144 | 409 |
| MS.gene066361.t1 | MTR_7g112615 | 60.436 | 321 | 123 | 3 | 3 | 321 | 1 | 319 | 5.10e-144 | 409 |
| MS.gene066361.t1 | MTR_7g113030 | 59.813 | 321 | 125 | 3 | 3 | 321 | 1 | 319 | 1.81e-143 | 407 |
| MS.gene066361.t1 | MTR_7g112620 | 59.190 | 321 | 127 | 3 | 3 | 321 | 1 | 319 | 5.58e-141 | 401 |
| MS.gene066361.t1 | MTR_4g005160 | 56.481 | 324 | 134 | 4 | 3 | 321 | 1 | 322 | 7.06e-133 | 380 |
| MS.gene066361.t1 | MTR_7g113010 | 61.131 | 283 | 106 | 3 | 3 | 283 | 1 | 281 | 8.94e-124 | 367 |
| MS.gene066361.t1 | MTR_7g113050 | 61.667 | 240 | 88 | 3 | 3 | 240 | 1 | 238 | 9.58e-106 | 308 |
| MS.gene066361.t1 | MTR_8g076680 | 47.352 | 321 | 165 | 3 | 1 | 321 | 1 | 317 | 3.57e-105 | 310 |
| MS.gene066361.t1 | MTR_7g112615 | 61.250 | 240 | 89 | 3 | 3 | 240 | 1 | 238 | 2.68e-104 | 305 |
| MS.gene066361.t1 | MTR_7g108825 | 59.244 | 238 | 95 | 1 | 3 | 240 | 1 | 236 | 2.56e-102 | 300 |
| MS.gene066361.t1 | MTR_8g076680 | 49.167 | 240 | 120 | 1 | 1 | 240 | 1 | 238 | 3.87e-81 | 246 |
| MS.gene066361.t1 | MTR_7g112615 | 63.529 | 170 | 58 | 3 | 3 | 170 | 1 | 168 | 7.80e-73 | 223 |
| MS.gene066361.t1 | MTR_1g083480 | 60.625 | 160 | 58 | 2 | 3 | 159 | 1 | 158 | 1.16e-67 | 209 |
| MS.gene066361.t1 | MTR_2g090245 | 36.025 | 322 | 190 | 9 | 3 | 320 | 1 | 310 | 4.21e-59 | 192 |
| MS.gene066361.t1 | MTR_2g090240 | 34.161 | 322 | 196 | 8 | 3 | 320 | 1 | 310 | 7.05e-59 | 192 |
| MS.gene066361.t1 | MTR_4g089060 | 34.675 | 323 | 192 | 9 | 3 | 320 | 1 | 309 | 3.56e-58 | 190 |
| MS.gene066361.t1 | MTR_4g089040 | 33.022 | 321 | 200 | 7 | 3 | 320 | 1 | 309 | 2.61e-56 | 185 |
| MS.gene066361.t1 | MTR_4g089060 | 32.286 | 350 | 191 | 10 | 3 | 320 | 1 | 336 | 4.78e-53 | 177 |
| MS.gene066361.t1 | MTR_7g112910 | 41.129 | 248 | 88 | 7 | 76 | 321 | 4 | 195 | 1.19e-50 | 167 |
| MS.gene066361.t1 | MTR_4g089060 | 35.745 | 235 | 138 | 6 | 3 | 233 | 1 | 226 | 2.24e-45 | 154 |
| MS.gene066361.t1 | MTR_3g024250 | 57.009 | 107 | 44 | 1 | 49 | 155 | 3 | 107 | 8.71e-36 | 126 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066361.t1 | AT4G02340 | 59.561 | 319 | 126 | 2 | 3 | 321 | 1 | 316 | 4.36e-149 | 422 |
| MS.gene066361.t1 | AT4G15960 | 58.951 | 324 | 128 | 1 | 3 | 321 | 51 | 374 | 6.67e-149 | 423 |
| MS.gene066361.t1 | AT3G05600 | 56.481 | 324 | 136 | 2 | 3 | 321 | 1 | 324 | 2.71e-140 | 400 |
| MS.gene066361.t1 | AT2G26740 | 57.632 | 321 | 131 | 3 | 6 | 321 | 1 | 321 | 9.38e-130 | 373 |
| MS.gene066361.t1 | AT2G26750 | 55.625 | 320 | 138 | 2 | 6 | 321 | 1 | 320 | 5.77e-127 | 365 |
| MS.gene066361.t1 | AT4G15955 | 54.321 | 324 | 114 | 4 | 7 | 321 | 6 | 304 | 9.80e-123 | 354 |
| MS.gene066361.t1 | AT3G05600 | 56.790 | 243 | 100 | 2 | 3 | 240 | 1 | 243 | 5.44e-100 | 294 |
| MS.gene066361.t1 | AT3G51000 | 45.938 | 320 | 166 | 5 | 5 | 321 | 4 | 319 | 8.64e-100 | 296 |
| MS.gene066361.t1 | AT4G15955 | 63.793 | 174 | 54 | 2 | 7 | 171 | 6 | 179 | 1.31e-79 | 240 |
| MS.gene066361.t1 | AT4G15955 | 63.636 | 165 | 51 | 2 | 7 | 162 | 6 | 170 | 3.84e-74 | 226 |
Find 0 sgRNAs with CRISPR-Local
Find 150 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CTAAATAGTTTTGAATTTTT+TGG | + | 32567:4081-4100 | MS.gene066361:intron | 15.0% |
| !!! | TTTTTTTACAGTAAAATCTA+TGG | + | 32567:4766-4785 | MS.gene066361:intron | 15.0% |
| !! | AACAATCAAATTTATCTCAT+TGG | - | 32567:4916-4935 | None:intergenic | 20.0% |
| !! | ATTTGATCAAGTAAATACTA+AGG | - | 32567:4060-4079 | None:intergenic | 20.0% |
| !! | TAATGAGTTAGTAAGAAATA+TGG | + | 32567:4864-4883 | MS.gene066361:intron | 20.0% |
| !! | TTTGATCAAGTAAATACTAA+GGG | - | 32567:4059-4078 | None:intergenic | 20.0% |
| !!! | AATTTTTTAATTGAGCAAAC+CGG | + | 32567:4240-4259 | MS.gene066361:intron | 20.0% |
| !!! | TTTACTTTGAAAATCATGAT+CGG | + | 32567:4299-4318 | MS.gene066361:intron | 20.0% |
| ! | AATATACACATAGCTGAAAA+GGG | + | 32567:3551-3570 | MS.gene066361:CDS | 25.0% |
| ! | ATGTACAAACCTTAAATCTA+AGG | - | 32567:4019-4038 | None:intergenic | 25.0% |
| ! | TGTACAAACCTTAAATCTAA+GGG | - | 32567:4018-4037 | None:intergenic | 25.0% |
| ! | TTTACAGTAAAATCTATGGA+GGG | + | 32567:4770-4789 | MS.gene066361:intron | 25.0% |
| !! | CAAAGATATATTGTTCTAAG+TGG | + | 32567:4398-4417 | MS.gene066361:intron | 25.0% |
| !! | TTTTACAGTAAAATCTATGG+AGG | + | 32567:4769-4788 | MS.gene066361:intron | 25.0% |
| !!! | TTTTTTCAGATGTCTACTTT+CGG | - | 32567:4213-4232 | None:intergenic | 25.0% |
| AACACTATAGGAGAATCATT+TGG | - | 32567:4571-4590 | None:intergenic | 30.0% | |
| AATAAAGGATACCTGAAATC+TGG | - | 32567:3972-3991 | None:intergenic | 30.0% | |
| ATTACCATAAACTGCTCTAA+GGG | - | 32567:3936-3955 | None:intergenic | 30.0% | |
| CAATATACACATAGCTGAAA+AGG | + | 32567:3550-3569 | MS.gene066361:CDS | 30.0% | |
| GTAAGTTTATCTTCAACTCT+AGG | + | 32567:4690-4709 | MS.gene066361:intron | 30.0% | |
| TCTGTCAATTGCAATATTAC+AGG | + | 32567:4426-4445 | MS.gene066361:intron | 30.0% | |
| TGTCTCTATCAATGTTTCAT+AGG | + | 32567:4956-4975 | MS.gene066361:intron | 30.0% | |
| ! | ATTCTTGTTGTAATAGCCAT+GGG | - | 32567:4597-4616 | None:intergenic | 30.0% |
| AGAGATTACATTCACAAAGG+TGG | + | 32567:5133-5152 | MS.gene066361:CDS | 35.0% | |
| AGGATGTGGTAGTAATTGAA+GGG | + | 32567:5182-5201 | MS.gene066361:CDS | 35.0% | |
| AGTTCCAGTGAAGTTTATAG+TGG | + | 32567:5075-5094 | MS.gene066361:CDS | 35.0% | |
| ATCTAAGGGAGCTTATCTAT+AGG | - | 32567:4004-4023 | None:intergenic | 35.0% | |
| CAAATGCAAGAGAAGCAATA+TGG | - | 32567:5010-5029 | None:intergenic | 35.0% | |
| CATTACCATAAACTGCTCTA+AGG | - | 32567:3937-3956 | None:intergenic | 35.0% | |
| CTACTATATCTCCAGATTTC+AGG | + | 32567:3958-3977 | MS.gene066361:CDS | 35.0% | |
| CTCTTGCATTTGTAGAAACT+GGG | + | 32567:5018-5037 | MS.gene066361:intron | 35.0% | |
| CTTTATCTACCTAAGGGTAA+AGG | + | 32567:4535-4554 | MS.gene066361:CDS | 35.0% | |
| GAGATTACATTCACAAAGGT+GGG | + | 32567:5134-5153 | MS.gene066361:CDS | 35.0% | |
| GATAAGCTCCCTTAGATTTA+AGG | + | 32567:4007-4026 | MS.gene066361:intron | 35.0% | |
| GATAAGTCAGAAATTCCTTC+AGG | - | 32567:4501-4520 | None:intergenic | 35.0% | |
| GCAAGAGATTACATTCACAA+AGG | + | 32567:5130-5149 | MS.gene066361:CDS | 35.0% | |
| GTGTATATTGATGCCATTGA+CGG | - | 32567:3540-3559 | None:intergenic | 35.0% | |
| GTTCCAGTGAAGTTTATAGT+GGG | + | 32567:5076-5095 | MS.gene066361:CDS | 35.0% | |
| TCTAAGGGAGCTTATCTATA+GGG | - | 32567:4003-4022 | None:intergenic | 35.0% | |
| TCTCTTGCATTTGTAGAAAC+TGG | + | 32567:5017-5036 | MS.gene066361:intron | 35.0% | |
| TTACCCTTAGGTAGATAAAG+TGG | - | 32567:4535-4554 | None:intergenic | 35.0% | |
| ! | CATTCTTGTTGTAATAGCCA+TGG | - | 32567:4598-4617 | None:intergenic | 35.0% |
| ! | GTATCAAGAGGCTTTCTTTT+GGG | - | 32567:3914-3933 | None:intergenic | 35.0% |
| ! | TATCAAGAGGCTTTCTTTTG+GGG | - | 32567:3913-3932 | None:intergenic | 35.0% |
| ! | TCCAGTCTTGTCAAATTTAG+AGG | - | 32567:4632-4651 | None:intergenic | 35.0% |
| ! | TGATCGGAATTTTCGAAATG+TGG | + | 32567:4315-4334 | MS.gene066361:intron | 35.0% |
| ! | TTCTTGTTGTAATAGCCATG+GGG | - | 32567:4596-4615 | None:intergenic | 35.0% |
| !! | CATATCGTTGGTGATATCAT+CGG | + | 32567:3740-3759 | MS.gene066361:CDS | 35.0% |
| !!! | GTGGATTGGTGTAGTTATTT+TGG | + | 32567:4371-4390 | MS.gene066361:intron | 35.0% |
| AACTCTGCTTCTATATCACC+AGG | - | 32567:4454-4473 | None:intergenic | 40.0% | |
| AAGCTAGATATGTGATCTGG+TGG | - | 32567:3634-3653 | None:intergenic | 40.0% | |
| ACAAGAGCCTTGATTCTTTC+AGG | - | 32567:3860-3879 | None:intergenic | 40.0% | |
| AGCTTATCTATAGGGACTGA+GGG | - | 32567:3995-4014 | None:intergenic | 40.0% | |
| ATTGCAATATTACAGGAGCC+TGG | + | 32567:4433-4452 | MS.gene066361:intron | 40.0% | |
| CAAGAGCCTTGATTCTTTCA+GGG | - | 32567:3859-3878 | None:intergenic | 40.0% | |
| CAATCCACAAAAACTCAGCA+TGG | - | 32567:4359-4378 | None:intergenic | 40.0% | |
| CATGTTTGATCAGTAAGTGC+CGG | - | 32567:4262-4281 | None:intergenic | 40.0% | |
| CGATGATATCACCAACGATA+TGG | - | 32567:3742-3761 | None:intergenic | 40.0% | |
| GAGGATGTGGTAGTAATTGA+AGG | + | 32567:5181-5200 | MS.gene066361:CDS | 40.0% | |
| GATACCCTTAGAGCAGTTTA+TGG | + | 32567:3929-3948 | MS.gene066361:CDS | 40.0% | |
| GCACTTCATCCATCAAGAAA+GGG | + | 32567:5210-5229 | MS.gene066361:CDS | 40.0% | |
| GCCTCTAAATTTGACAAGAC+TGG | + | 32567:4628-4647 | MS.gene066361:CDS | 40.0% | |
| GGAAAGATACCAAGCAGTAA+GGG | - | 32567:3828-3847 | None:intergenic | 40.0% | |
| GGATGTGGTAGTAATTGAAG+GGG | + | 32567:5183-5202 | MS.gene066361:CDS | 40.0% | |
| GGTCCACTTTATCTACCTAA+GGG | + | 32567:4529-4548 | MS.gene066361:CDS | 40.0% | |
| TAGGTAGATAAAGTGGACCA+GGG | - | 32567:4528-4547 | None:intergenic | 40.0% | |
| TATAGGGACTGAGGGAATAA+AGG | - | 32567:3987-4006 | None:intergenic | 40.0% | |
| TCACCCACTATAAACTTCAC+TGG | - | 32567:5082-5101 | None:intergenic | 40.0% | |
| TCTTATCAGCCCTTTCTTGA+TGG | - | 32567:5222-5241 | None:intergenic | 40.0% | |
| TGATATCACCAACGATATGG+AGG | - | 32567:3739-3758 | None:intergenic | 40.0% | |
| TGCCATTGACGGTTACAATT+CGG | - | 32567:3529-3548 | None:intergenic | 40.0% | |
| TGGTCCACTTTATCTACCTA+AGG | + | 32567:4528-4547 | MS.gene066361:CDS | 40.0% | |
| TGTCCAAAACCTTTACCCTT+AGG | - | 32567:4547-4566 | None:intergenic | 40.0% | |
| TTAGGTAGATAAAGTGGACC+AGG | - | 32567:4529-4548 | None:intergenic | 40.0% | |
| TTGACAAGACTGGATTCACA+GGG | + | 32567:4638-4657 | MS.gene066361:CDS | 40.0% | |
| TTTGACAAGACTGGATTCAC+AGG | + | 32567:4637-4656 | MS.gene066361:CDS | 40.0% | |
| ! | ATCACATATCTAGCTTGCCA+TGG | + | 32567:3638-3657 | MS.gene066361:CDS | 40.0% |
| ! | CAATCCATGCTGAGTTTTTG+TGG | + | 32567:4352-4371 | MS.gene066361:intron | 40.0% |
| ! | CATGCTGAGTTTTTGTGGAT+TGG | + | 32567:4357-4376 | MS.gene066361:intron | 40.0% |
| ! | CTACCTAAGGGTAAAGGTTT+TGG | + | 32567:4541-4560 | MS.gene066361:CDS | 40.0% |
| ! | GGAATTTTCGAAATGTGGAG+TGG | + | 32567:4320-4339 | MS.gene066361:intron | 40.0% |
| ! | GGTATCAAGAGGCTTTCTTT+TGG | - | 32567:3915-3934 | None:intergenic | 40.0% |
| ! | TCTTGTTGTAATAGCCATGG+GGG | - | 32567:4595-4614 | None:intergenic | 40.0% |
| !! | CAAGAGAAGGTGTTTGTTGT+GGG | + | 32567:3788-3807 | MS.gene066361:CDS | 40.0% |
| !! | TCAAGAGAAGGTGTTTGTTG+TGG | + | 32567:3787-3806 | MS.gene066361:CDS | 40.0% |
| CACATAGCTGAAAAGGGTCA+AGG | + | 32567:3557-3576 | MS.gene066361:CDS | 45.0% | |
| CACCGAATTGTAACCGTCAA+TGG | + | 32567:3524-3543 | MS.gene066361:CDS | 45.0% | |
| CATTGCTGGTGATCAAGAGA+AGG | + | 32567:3775-3794 | MS.gene066361:CDS | 45.0% | |
| CGGCACTTACTGATCAAACA+TGG | + | 32567:4260-4279 | MS.gene066361:intron | 45.0% | |
| CTATCGCCCTGAAAGAATCA+AGG | + | 32567:3850-3869 | MS.gene066361:CDS | 45.0% | |
| CTTCTCTTGATCACCAGCAA+TGG | - | 32567:3777-3796 | None:intergenic | 45.0% | |
| GACCTTACCTATAATGCACC+TGG | + | 32567:5106-5125 | MS.gene066361:CDS | 45.0% | |
| GAGCTTATCTATAGGGACTG+AGG | - | 32567:3996-4015 | None:intergenic | 45.0% | |
| GATTCTTTCAGGGCGATAGA+GGG | - | 32567:3849-3868 | None:intergenic | 45.0% | |
| GCCATGAATACCATAGGTCA+GGG | - | 32567:3610-3629 | None:intergenic | 45.0% | |
| GGCAAGCTAGATATGTGATC+TGG | - | 32567:3637-3656 | None:intergenic | 45.0% | |
| GGCACTTCATCCATCAAGAA+AGG | + | 32567:5209-5228 | MS.gene066361:CDS | 45.0% | |
| GGGAAAGATACCAAGCAGTA+AGG | - | 32567:3829-3848 | None:intergenic | 45.0% | |
| TCCCTGACCTATGGTATTCA+TGG | + | 32567:3606-3625 | MS.gene066361:CDS | 45.0% | |
| TGAATGTAATCTCTTGCGCC+AGG | - | 32567:5127-5146 | None:intergenic | 45.0% | |
| TGACAAGACTGGATTCACAG+GGG | + | 32567:4639-4658 | MS.gene066361:CDS | 45.0% | |
| TGATTCTTTCAGGGCGATAG+AGG | - | 32567:3850-3869 | None:intergenic | 45.0% | |
| TGGAACTGAAAGAGTCCTGA+AGG | + | 32567:4483-4502 | MS.gene066361:CDS | 45.0% | |
| TGGTAGTAATTGAAGGGGCA+GGG | + | 32567:5188-5207 | MS.gene066361:CDS | 45.0% | |
| TTTCTGACTTATCGCAACCC+TGG | + | 32567:4508-4527 | MS.gene066361:CDS | 45.0% | |
| ! | TTTGTTGTGGGCCATGATTG+GGG | + | 32567:3800-3819 | MS.gene066361:CDS | 45.0% |
| !! | ACTGCTCTAAGGGTATCAAG+AGG | - | 32567:3926-3945 | None:intergenic | 45.0% |
| !! | GAAGCAGAGTTTGCTGAGAT+TGG | + | 32567:4463-4482 | MS.gene066361:CDS | 45.0% |
| !! | GTTTGTTGTGGGCCATGATT+GGG | + | 32567:3799-3818 | MS.gene066361:CDS | 45.0% |
| !! | TGTTTGTTGTGGGCCATGAT+TGG | + | 32567:3798-3817 | MS.gene066361:CDS | 45.0% |
| !!! | GGCTTTCTTTTGGGGTTTCT+AGG | - | 32567:3905-3924 | None:intergenic | 45.0% |
| AACGATATGGAGGCTCGTGT+AGG | - | 32567:3729-3748 | None:intergenic | 50.0% | |
| ACTACCACATCCTCCAGAAG+TGG | - | 32567:5175-5194 | None:intergenic | 50.0% | |
| AGCCATGGATGAAGAGGATG+AGG | - | 32567:3586-3605 | None:intergenic | 50.0% | |
| CCATGGATGAAGAGGATGAG+GGG | - | 32567:3584-3603 | None:intergenic | 50.0% | |
| CGCCAGGTGCATTATAGGTA+AGG | - | 32567:5111-5130 | None:intergenic | 50.0% | |
| CGCCATGAATACCATAGGTC+AGG | - | 32567:3611-3630 | None:intergenic | 50.0% | |
| GCCATGGATGAAGAGGATGA+GGG | - | 32567:3585-3604 | None:intergenic | 50.0% | |
| GTGGTAGTAATTGAAGGGGC+AGG | + | 32567:5187-5206 | MS.gene066361:CDS | 50.0% | |
| TACACGAGCCTCCATATCGT+TGG | + | 32567:3728-3747 | MS.gene066361:CDS | 50.0% | |
| TATCAGTGTCTCCGTATCCG+CGG | - | 32567:3688-3707 | None:intergenic | 50.0% | |
| TCTTGCGCCAGGTGCATTAT+AGG | - | 32567:5116-5135 | None:intergenic | 50.0% | |
| TTGCCATGGTTACCGTTGTG+TGG | + | 32567:3652-3671 | MS.gene066361:CDS | 50.0% | |
| ! | TTGACTTGAGCACCAGTCCA+TGG | - | 32567:5055-5074 | None:intergenic | 50.0% |
| !! | GAAGAGAGATGTGCCACTTC+TGG | + | 32567:5159-5178 | MS.gene066361:CDS | 50.0% |
| ACCATAGGTCAGGGAAGCCA+TGG | - | 32567:3601-3620 | None:intergenic | 55.0% | |
| ACTGGGAGCTCAATGCTCCA+TGG | + | 32567:5035-5054 | MS.gene066361:CDS | 55.0% | |
| AGCCATGGGGGCAACACTAT+AGG | - | 32567:4583-4602 | None:intergenic | 55.0% | |
| CAGGGAAGCCATGGATGAAG+AGG | - | 32567:3592-3611 | None:intergenic | 55.0% | |
| CCCCTCATCCTCTTCATCCA+TGG | + | 32567:3581-3600 | MS.gene066361:CDS | 55.0% | |
| CTCCTATAGTGTTGCCCCCA+TGG | + | 32567:4578-4597 | MS.gene066361:CDS | 55.0% | |
| GAGCTCAATGCTCCATGGAC+TGG | + | 32567:5040-5059 | MS.gene066361:CDS | 55.0% | |
| GGACTTCTTGACGCCATTGC+TGG | + | 32567:3761-3780 | MS.gene066361:CDS | 55.0% | |
| GGTGGCGCCATGAATACCAT+AGG | - | 32567:3616-3635 | None:intergenic | 55.0% | |
| TCCATGGCTTCCCTGACCTA+TGG | + | 32567:3597-3616 | MS.gene066361:CDS | 55.0% | |
| TGGAGGCTCGTGTAGGATGT+CGG | - | 32567:3722-3741 | None:intergenic | 55.0% | |
| ! | ATTGGGGTGCCCTTACTGCT+TGG | + | 32567:3816-3835 | MS.gene066361:CDS | 55.0% |
| !! | CAGTAAGGGCACCCCAATCA+TGG | - | 32567:3814-3833 | None:intergenic | 55.0% |
| !! | GAGAGATGTGCCACTTCTGG+AGG | + | 32567:5162-5181 | MS.gene066361:CDS | 55.0% |
| !! | TGTGCCACTTCTGGAGGATG+TGG | + | 32567:5168-5187 | MS.gene066361:CDS | 55.0% |
| GCTCGTGTAGGATGTCGGTG+AGG | - | 32567:3717-3736 | None:intergenic | 60.0% | |
| GGGCCACACAACGGTAACCA+TGG | - | 32567:3658-3677 | None:intergenic | 60.0% | |
| GTGTAGGATGTCGGTGAGGC+TGG | - | 32567:3713-3732 | None:intergenic | 60.0% | |
| TCTCCGTATCCGCGGAGATC+CGG | - | 32567:3680-3699 | None:intergenic | 60.0% | |
| TGGTTACCGTTGTGTGGCCC+CGG | + | 32567:3658-3677 | MS.gene066361:CDS | 60.0% | |
| CTCCGTATCCGCGGAGATCC+GGG | - | 32567:3679-3698 | None:intergenic | 65.0% | |
| GGAGATCCGGGGCCACACAA+CGG | - | 32567:3667-3686 | None:intergenic | 65.0% | |
| TCCGTATCCGCGGAGATCCG+GGG | - | 32567:3678-3697 | None:intergenic | 65.0% | |
| GCCCCGGATCTCCGCGGATA+CGG | + | 32567:3674-3693 | MS.gene066361:CDS | 70.0% | |
| TGTGTGGCCCCGGATCTCCG+CGG | + | 32567:3668-3687 | MS.gene066361:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 32567 | gene | 3503 | 5279 | 3503 | ID=MS.gene066361 |
| 32567 | mRNA | 3503 | 5279 | 3503 | ID=MS.gene066361.t1;Parent=MS.gene066361 |
| 32567 | exon | 3503 | 3979 | 3503 | ID=MS.gene066361.t1.exon1;Parent=MS.gene066361.t1 |
| 32567 | CDS | 3503 | 3979 | 3503 | ID=cds.MS.gene066361.t1;Parent=MS.gene066361.t1 |
| 32567 | exon | 4448 | 4689 | 4448 | ID=MS.gene066361.t1.exon2;Parent=MS.gene066361.t1 |
| 32567 | CDS | 4448 | 4689 | 4448 | ID=cds.MS.gene066361.t1;Parent=MS.gene066361.t1 |
| 32567 | exon | 5033 | 5279 | 5033 | ID=MS.gene066361.t1.exon3;Parent=MS.gene066361.t1 |
| 32567 | CDS | 5033 | 5279 | 5033 | ID=cds.MS.gene066361.t1;Parent=MS.gene066361.t1 |
| Gene Sequence |
| Protein sequence |
