Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035367.t1 | KEH32298.1 | 96.3 | 321 | 12 | 0 | 1 | 321 | 35 | 355 | 2.70E-189 | 671 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035367.t1 | I6YGS0 | 36.2 | 320 | 182 | 7 | 9 | 317 | 7 | 315 | 4.9e-54 | 213.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035367.t1 | A0A072UTA2 | 96.3 | 321 | 12 | 0 | 1 | 321 | 35 | 355 | 2.0e-189 | 671.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035367.t1 | MTR_4g120240 | 96.262 | 321 | 12 | 0 | 1 | 321 | 35 | 355 | 0.0 | 648 |
| MS.gene035367.t1 | MTR_7g108825 | 61.129 | 319 | 122 | 1 | 3 | 321 | 1 | 317 | 4.91e-148 | 419 |
| MS.gene035367.t1 | MTR_7g112970 | 61.250 | 320 | 119 | 3 | 3 | 321 | 1 | 316 | 6.87e-148 | 419 |
| MS.gene035367.t1 | MTR_7g113020 | 61.994 | 321 | 118 | 3 | 3 | 321 | 1 | 319 | 3.84e-146 | 414 |
| MS.gene035367.t1 | MTR_7g112960 | 61.682 | 321 | 119 | 3 | 3 | 321 | 1 | 319 | 1.05e-145 | 413 |
| MS.gene035367.t1 | MTR_7g112963 | 61.371 | 321 | 120 | 3 | 3 | 321 | 1 | 319 | 2.36e-145 | 412 |
| MS.gene035367.t1 | MTR_7g113050 | 60.125 | 321 | 124 | 3 | 3 | 321 | 1 | 319 | 4.52e-144 | 409 |
| MS.gene035367.t1 | MTR_7g112615 | 60.436 | 321 | 123 | 3 | 3 | 321 | 1 | 319 | 8.52e-144 | 408 |
| MS.gene035367.t1 | MTR_7g113030 | 59.813 | 321 | 125 | 3 | 3 | 321 | 1 | 319 | 2.84e-143 | 407 |
| MS.gene035367.t1 | MTR_7g112620 | 59.190 | 321 | 127 | 3 | 3 | 321 | 1 | 319 | 1.09e-140 | 400 |
| MS.gene035367.t1 | MTR_4g005160 | 56.790 | 324 | 133 | 4 | 3 | 321 | 1 | 322 | 1.56e-133 | 382 |
| MS.gene035367.t1 | MTR_7g113010 | 61.131 | 283 | 106 | 3 | 3 | 283 | 1 | 281 | 1.71e-123 | 366 |
| MS.gene035367.t1 | MTR_7g113050 | 61.667 | 240 | 88 | 3 | 3 | 240 | 1 | 238 | 1.67e-105 | 308 |
| MS.gene035367.t1 | MTR_8g076680 | 47.352 | 321 | 165 | 3 | 1 | 321 | 1 | 317 | 2.26e-105 | 311 |
| MS.gene035367.t1 | MTR_7g112615 | 61.250 | 240 | 89 | 3 | 3 | 240 | 1 | 238 | 3.75e-104 | 305 |
| MS.gene035367.t1 | MTR_7g108825 | 59.244 | 238 | 95 | 1 | 3 | 240 | 1 | 236 | 4.13e-102 | 299 |
| MS.gene035367.t1 | MTR_8g076680 | 49.167 | 240 | 120 | 1 | 1 | 240 | 1 | 238 | 2.98e-81 | 246 |
| MS.gene035367.t1 | MTR_7g112615 | 63.529 | 170 | 58 | 3 | 3 | 170 | 1 | 168 | 6.55e-73 | 223 |
| MS.gene035367.t1 | MTR_1g083480 | 60.625 | 160 | 58 | 2 | 3 | 159 | 1 | 158 | 9.53e-68 | 210 |
| MS.gene035367.t1 | MTR_2g090245 | 36.025 | 322 | 190 | 9 | 3 | 320 | 1 | 310 | 6.19e-59 | 192 |
| MS.gene035367.t1 | MTR_2g090240 | 34.161 | 322 | 196 | 8 | 3 | 320 | 1 | 310 | 1.00e-58 | 191 |
| MS.gene035367.t1 | MTR_4g089060 | 34.675 | 323 | 192 | 9 | 3 | 320 | 1 | 309 | 6.16e-58 | 189 |
| MS.gene035367.t1 | MTR_4g089040 | 33.022 | 321 | 200 | 7 | 3 | 320 | 1 | 309 | 4.18e-56 | 184 |
| MS.gene035367.t1 | MTR_4g089060 | 32.286 | 350 | 191 | 10 | 3 | 320 | 1 | 336 | 7.09e-53 | 177 |
| MS.gene035367.t1 | MTR_7g112910 | 40.726 | 248 | 89 | 7 | 76 | 321 | 4 | 195 | 4.52e-50 | 165 |
| MS.gene035367.t1 | MTR_4g089060 | 35.745 | 235 | 138 | 6 | 3 | 233 | 1 | 226 | 3.44e-45 | 154 |
| MS.gene035367.t1 | MTR_3g024250 | 57.009 | 107 | 44 | 1 | 49 | 155 | 3 | 107 | 7.75e-36 | 126 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene035367.t1 | AT4G02340 | 59.561 | 319 | 126 | 2 | 3 | 321 | 1 | 316 | 2.73e-149 | 422 |
| MS.gene035367.t1 | AT4G15960 | 58.951 | 324 | 128 | 1 | 3 | 321 | 51 | 374 | 1.39e-148 | 422 |
| MS.gene035367.t1 | AT3G05600 | 56.481 | 324 | 136 | 2 | 3 | 321 | 1 | 324 | 4.34e-140 | 399 |
| MS.gene035367.t1 | AT2G26740 | 57.632 | 321 | 131 | 3 | 6 | 321 | 1 | 321 | 1.10e-129 | 372 |
| MS.gene035367.t1 | AT2G26750 | 55.625 | 320 | 138 | 2 | 6 | 321 | 1 | 320 | 3.65e-127 | 366 |
| MS.gene035367.t1 | AT4G15955 | 54.321 | 324 | 114 | 4 | 7 | 321 | 6 | 304 | 1.26e-122 | 354 |
| MS.gene035367.t1 | AT3G51000 | 45.938 | 320 | 166 | 5 | 5 | 321 | 4 | 319 | 5.01e-100 | 297 |
| MS.gene035367.t1 | AT3G05600 | 56.790 | 243 | 100 | 2 | 3 | 240 | 1 | 243 | 9.59e-100 | 294 |
| MS.gene035367.t1 | AT4G15955 | 63.793 | 174 | 54 | 2 | 7 | 171 | 6 | 179 | 1.03e-79 | 241 |
| MS.gene035367.t1 | AT4G15955 | 63.636 | 165 | 51 | 2 | 7 | 162 | 6 | 170 | 3.13e-74 | 226 |
Find 0 sgRNAs with CRISPR-Local
Find 151 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATCAAATTTATCTCAT+TGG | + | 32568:18860-18879 | None:intergenic | 15.0% |
| !!! | CTAAATAGTTTTGAATTTTT+TGG | - | 32568:18025-18044 | MS.gene035367:intron | 15.0% |
| !!! | TTTTTTTACAGTAAAATCTA+TGG | - | 32568:18710-18729 | MS.gene035367:intron | 15.0% |
| !! | ATTTGATCAAGTAAATACTA+AGG | + | 32568:18004-18023 | None:intergenic | 20.0% |
| !! | TAATGAGTTAGTAAGAAATA+TGG | - | 32568:18808-18827 | MS.gene035367:CDS | 20.0% |
| !! | TTTGATCAAGTAAATACTAA+GGG | + | 32568:18003-18022 | None:intergenic | 20.0% |
| !!! | AATTTTTTAATTGAGCAAAC+CGG | - | 32568:18184-18203 | MS.gene035367:CDS | 20.0% |
| !!! | TTTACTTTGAAAATCATGAT+CGG | - | 32568:18243-18262 | MS.gene035367:CDS | 20.0% |
| ! | AATATACACATAGCTGAAAA+GGG | - | 32568:17495-17514 | MS.gene035367:CDS | 25.0% |
| ! | ATGTACAAACCTTAAATCTA+AGG | + | 32568:17963-17982 | None:intergenic | 25.0% |
| ! | TGTACAAACCTTAAATCTAA+GGG | + | 32568:17962-17981 | None:intergenic | 25.0% |
| ! | TTTACAGTAAAATCTATGGA+GGG | - | 32568:18714-18733 | MS.gene035367:intron | 25.0% |
| !! | CAAAGATATATTGTTCTAAG+TGG | - | 32568:18342-18361 | MS.gene035367:intron | 25.0% |
| !! | TTTTACAGTAAAATCTATGG+AGG | - | 32568:18713-18732 | MS.gene035367:intron | 25.0% |
| !!! | TTTTTTCAGATGTCTACTTT+CGG | + | 32568:18157-18176 | None:intergenic | 25.0% |
| AACACTATAGGAGAATCATT+TGG | + | 32568:18515-18534 | None:intergenic | 30.0% | |
| AATAAAGGATACCTGAAATC+TGG | + | 32568:17916-17935 | None:intergenic | 30.0% | |
| ATTACCATAAACTGCTCTAA+GGG | + | 32568:17880-17899 | None:intergenic | 30.0% | |
| CAATATACACATAGCTGAAA+AGG | - | 32568:17494-17513 | MS.gene035367:CDS | 30.0% | |
| GTAAGTTTATCTTCAACTCT+AGG | - | 32568:18634-18653 | MS.gene035367:intron | 30.0% | |
| TCTGTCAATTGCAATATTAC+AGG | - | 32568:18370-18389 | MS.gene035367:intron | 30.0% | |
| TGTCTCTATCAATGTTTCAT+AGG | - | 32568:18900-18919 | MS.gene035367:CDS | 30.0% | |
| !! | TCCAGTCTTGTTAAATTTAG+AGG | + | 32568:18576-18595 | None:intergenic | 30.0% |
| AGAGATTACATTCACAAAGG+TGG | - | 32568:19077-19096 | MS.gene035367:CDS | 35.0% | |
| AGTTCCAGTGAAGTTTATAG+TGG | - | 32568:19019-19038 | MS.gene035367:CDS | 35.0% | |
| ATCTAAGGGAGCTTATCTAT+AGG | + | 32568:17948-17967 | None:intergenic | 35.0% | |
| ATTCTTGTTGCAATAGCCAT+GGG | + | 32568:18541-18560 | None:intergenic | 35.0% | |
| CAAATGCAAGAGAAGCAATA+TGG | + | 32568:18954-18973 | None:intergenic | 35.0% | |
| CATTACCATAAACTGCTCTA+AGG | + | 32568:17881-17900 | None:intergenic | 35.0% | |
| CTACTATATCTCCAGATTTC+AGG | - | 32568:17902-17921 | MS.gene035367:intron | 35.0% | |
| CTCTTGCATTTGTAGAAACT+GGG | - | 32568:18962-18981 | MS.gene035367:CDS | 35.0% | |
| CTTTATCTACCTAAGGGTAA+AGG | - | 32568:18479-18498 | MS.gene035367:intron | 35.0% | |
| GAGATTACATTCACAAAGGT+GGG | - | 32568:19078-19097 | MS.gene035367:CDS | 35.0% | |
| GATAAGCTCCCTTAGATTTA+AGG | - | 32568:17951-17970 | MS.gene035367:intron | 35.0% | |
| GCAAGAGATTACATTCACAA+AGG | - | 32568:19074-19093 | MS.gene035367:CDS | 35.0% | |
| GCCTCTAAATTTAACAAGAC+TGG | - | 32568:18572-18591 | MS.gene035367:intron | 35.0% | |
| GTGTATATTGATGCCATTGA+CGG | + | 32568:17484-17503 | None:intergenic | 35.0% | |
| GTTCCAGTGAAGTTTATAGT+GGG | - | 32568:19020-19039 | MS.gene035367:CDS | 35.0% | |
| TCTAAGGGAGCTTATCTATA+GGG | + | 32568:17947-17966 | None:intergenic | 35.0% | |
| TCTCTTGCATTTGTAGAAAC+TGG | - | 32568:18961-18980 | MS.gene035367:CDS | 35.0% | |
| TTAACAAGACTGGATTCACA+GGG | - | 32568:18582-18601 | MS.gene035367:intron | 35.0% | |
| TTACCCTTAGGTAGATAAAG+TGG | + | 32568:18479-18498 | None:intergenic | 35.0% | |
| TTTAACAAGACTGGATTCAC+AGG | - | 32568:18581-18600 | MS.gene035367:intron | 35.0% | |
| ! | GTATCAAGAGGCTTTCTTTT+GGG | + | 32568:17858-17877 | None:intergenic | 35.0% |
| ! | TATCAAGAGGCTTTCTTTTG+GGG | + | 32568:17857-17876 | None:intergenic | 35.0% |
| ! | TGATCGGAATTTTCGAAATG+TGG | - | 32568:18259-18278 | MS.gene035367:CDS | 35.0% |
| !! | CATATCGTTGGTGATATCAT+CGG | - | 32568:17684-17703 | MS.gene035367:intron | 35.0% |
| !!! | GTGGATTGGTGTAGTTATTT+TGG | - | 32568:18315-18334 | MS.gene035367:intron | 35.0% |
| AACTCTGCTTCTATATCACC+AGG | + | 32568:18398-18417 | None:intergenic | 40.0% | |
| AAGCTAGATATGTGATCTGG+TGG | + | 32568:17578-17597 | None:intergenic | 40.0% | |
| ACAAGAGCCTTGATTCTTTC+AGG | + | 32568:17804-17823 | None:intergenic | 40.0% | |
| AGCTTATCTATAGGGACTGA+GGG | + | 32568:17939-17958 | None:intergenic | 40.0% | |
| AGGATGTGGTAGTAATCGAA+GGG | - | 32568:19126-19145 | MS.gene035367:CDS | 40.0% | |
| ATTGCAATATTACAGGAGCC+TGG | - | 32568:18377-18396 | MS.gene035367:intron | 40.0% | |
| CAAGAGCCTTGATTCTTTCA+GGG | + | 32568:17803-17822 | None:intergenic | 40.0% | |
| CAATCCACAAAAACTCAGCA+TGG | + | 32568:18303-18322 | None:intergenic | 40.0% | |
| CATGTTTGATCAGTAAGTGC+CGG | + | 32568:18206-18225 | None:intergenic | 40.0% | |
| CATTCTTGTTGCAATAGCCA+TGG | + | 32568:18542-18561 | None:intergenic | 40.0% | |
| CGATGATATCACCAACGATA+TGG | + | 32568:17686-17705 | None:intergenic | 40.0% | |
| GATACCCTTAGAGCAGTTTA+TGG | - | 32568:17873-17892 | MS.gene035367:intron | 40.0% | |
| GCACTTCATCCATCAAGAAA+GGG | - | 32568:19154-19173 | MS.gene035367:CDS | 40.0% | |
| GGAAAGATACCAAGCAGTAA+GGG | + | 32568:17772-17791 | None:intergenic | 40.0% | |
| GGTAAGTCAGAAATTCCTTC+AGG | + | 32568:18445-18464 | None:intergenic | 40.0% | |
| GGTCCACTTTATCTACCTAA+GGG | - | 32568:18473-18492 | MS.gene035367:intron | 40.0% | |
| TAACAAGACTGGATTCACAG+GGG | - | 32568:18583-18602 | MS.gene035367:intron | 40.0% | |
| TAGGTAGATAAAGTGGACCA+GGG | + | 32568:18472-18491 | None:intergenic | 40.0% | |
| TATAGGGACTGAGGGAATAA+AGG | + | 32568:17931-17950 | None:intergenic | 40.0% | |
| TCACCCACTATAAACTTCAC+TGG | + | 32568:19026-19045 | None:intergenic | 40.0% | |
| TCTTATCAGCCCTTTCTTGA+TGG | + | 32568:19166-19185 | None:intergenic | 40.0% | |
| TGATATCACCAACGATATGG+AGG | + | 32568:17683-17702 | None:intergenic | 40.0% | |
| TGCCATTGACGGTTACAATT+CGG | + | 32568:17473-17492 | None:intergenic | 40.0% | |
| TGGTCCACTTTATCTACCTA+AGG | - | 32568:18472-18491 | MS.gene035367:intron | 40.0% | |
| TGTCCAAAACCTTTACCCTT+AGG | + | 32568:18491-18510 | None:intergenic | 40.0% | |
| TTAGGTAGATAAAGTGGACC+AGG | + | 32568:18473-18492 | None:intergenic | 40.0% | |
| TTCTTGTTGCAATAGCCATG+GGG | + | 32568:18540-18559 | None:intergenic | 40.0% | |
| ! | ATCACATATCTAGCTTGCCA+TGG | - | 32568:17582-17601 | MS.gene035367:CDS | 40.0% |
| ! | CAATCCATGCTGAGTTTTTG+TGG | - | 32568:18296-18315 | MS.gene035367:intron | 40.0% |
| ! | CATGCTGAGTTTTTGTGGAT+TGG | - | 32568:18301-18320 | MS.gene035367:intron | 40.0% |
| ! | CTACCTAAGGGTAAAGGTTT+TGG | - | 32568:18485-18504 | MS.gene035367:intron | 40.0% |
| ! | GGAATTTTCGAAATGTGGAG+TGG | - | 32568:18264-18283 | MS.gene035367:intron | 40.0% |
| ! | GGTATCAAGAGGCTTTCTTT+TGG | + | 32568:17859-17878 | None:intergenic | 40.0% |
| !! | CAAGAGAAGGTGTTTGTTGT+GGG | - | 32568:17732-17751 | MS.gene035367:intron | 40.0% |
| !! | TCAAGAGAAGGTGTTTGTTG+TGG | - | 32568:17731-17750 | MS.gene035367:intron | 40.0% |
| CACATAGCTGAAAAGGGTCA+AGG | - | 32568:17501-17520 | MS.gene035367:CDS | 45.0% | |
| CACCGAATTGTAACCGTCAA+TGG | - | 32568:17468-17487 | MS.gene035367:CDS | 45.0% | |
| CATTGCTGGTGATCAAGAGA+AGG | - | 32568:17719-17738 | MS.gene035367:intron | 45.0% | |
| CGGCACTTACTGATCAAACA+TGG | - | 32568:18204-18223 | MS.gene035367:CDS | 45.0% | |
| CTATCGCCCTGAAAGAATCA+AGG | - | 32568:17794-17813 | MS.gene035367:intron | 45.0% | |
| CTTCTCTTGATCACCAGCAA+TGG | + | 32568:17721-17740 | None:intergenic | 45.0% | |
| GACCTTACCTATAATGCACC+TGG | - | 32568:19050-19069 | MS.gene035367:CDS | 45.0% | |
| GAGCTTATCTATAGGGACTG+AGG | + | 32568:17940-17959 | None:intergenic | 45.0% | |
| GAGGATGTGGTAGTAATCGA+AGG | - | 32568:19125-19144 | MS.gene035367:CDS | 45.0% | |
| GATTCTTTCAGGGCGATAGA+GGG | + | 32568:17793-17812 | None:intergenic | 45.0% | |
| GCCATGAATACCATAGGTCA+GGG | + | 32568:17554-17573 | None:intergenic | 45.0% | |
| GGATGTGGTAGTAATCGAAG+GGG | - | 32568:19127-19146 | MS.gene035367:CDS | 45.0% | |
| GGCAAGCTAGATATGTGATC+TGG | + | 32568:17581-17600 | None:intergenic | 45.0% | |
| GGCACTTCATCCATCAAGAA+AGG | - | 32568:19153-19172 | MS.gene035367:CDS | 45.0% | |
| GGGAAAGATACCAAGCAGTA+AGG | + | 32568:17773-17792 | None:intergenic | 45.0% | |
| TCCCTGACCTATGGTATTCA+TGG | - | 32568:17550-17569 | MS.gene035367:CDS | 45.0% | |
| TCTTGTTGCAATAGCCATGG+GGG | + | 32568:18539-18558 | None:intergenic | 45.0% | |
| TGAATGTAATCTCTTGCGCC+AGG | + | 32568:19071-19090 | None:intergenic | 45.0% | |
| TGATTCTTTCAGGGCGATAG+AGG | + | 32568:17794-17813 | None:intergenic | 45.0% | |
| TGGAACTGAAAGAGTCCTGA+AGG | - | 32568:18427-18446 | MS.gene035367:intron | 45.0% | |
| ! | TTTGTTGTGGGCCATGATTG+GGG | - | 32568:17744-17763 | MS.gene035367:intron | 45.0% |
| !! | ACTGCTCTAAGGGTATCAAG+AGG | + | 32568:17870-17889 | None:intergenic | 45.0% |
| !! | GAAGCAGAGTTTGCTGAGAT+TGG | - | 32568:18407-18426 | MS.gene035367:intron | 45.0% |
| !! | GTTTGTTGTGGGCCATGATT+GGG | - | 32568:17743-17762 | MS.gene035367:intron | 45.0% |
| !! | TGTTTGTTGTGGGCCATGAT+TGG | - | 32568:17742-17761 | MS.gene035367:intron | 45.0% |
| !!! | GGCTTTCTTTTGGGGTTTCT+AGG | + | 32568:17849-17868 | None:intergenic | 45.0% |
| AACGATATGGAGGCTCGTGT+AGG | + | 32568:17673-17692 | None:intergenic | 50.0% | |
| ACTACCACATCCTCCAGAAG+TGG | + | 32568:19119-19138 | None:intergenic | 50.0% | |
| AGCCATGGATGAAGAGGATG+AGG | + | 32568:17530-17549 | None:intergenic | 50.0% | |
| CCATGGATGAAGAGGATGAG+GGG | + | 32568:17528-17547 | None:intergenic | 50.0% | |
| CGCCAGGTGCATTATAGGTA+AGG | + | 32568:19055-19074 | None:intergenic | 50.0% | |
| CGCCATGAATACCATAGGTC+AGG | + | 32568:17555-17574 | None:intergenic | 50.0% | |
| GATAAAGTGGACCAGGGTTG+CGG | + | 32568:18466-18485 | None:intergenic | 50.0% | |
| GCCATGGATGAAGAGGATGA+GGG | + | 32568:17529-17548 | None:intergenic | 50.0% | |
| TACACGAGCCTCCATATCGT+TGG | - | 32568:17672-17691 | MS.gene035367:CDS | 50.0% | |
| TATCAGTGTCTCCGTATCCG+CGG | + | 32568:17632-17651 | None:intergenic | 50.0% | |
| TCTTGCGCCAGGTGCATTAT+AGG | + | 32568:19060-19079 | None:intergenic | 50.0% | |
| TGGTAGTAATCGAAGGGGCA+GGG | - | 32568:19132-19151 | MS.gene035367:CDS | 50.0% | |
| TTGCCATGGTTACCGTTGTG+TGG | - | 32568:17596-17615 | MS.gene035367:CDS | 50.0% | |
| TTTCTGACTTACCGCAACCC+TGG | - | 32568:18452-18471 | MS.gene035367:intron | 50.0% | |
| ! | TTGACTTGAGCACCAGTCCA+TGG | + | 32568:18999-19018 | None:intergenic | 50.0% |
| !! | GAAGAGAGATGTGCCACTTC+TGG | - | 32568:19103-19122 | MS.gene035367:CDS | 50.0% |
| ACCATAGGTCAGGGAAGCCA+TGG | + | 32568:17545-17564 | None:intergenic | 55.0% | |
| ACTGGGAGCTCAATGCTCCA+TGG | - | 32568:18979-18998 | MS.gene035367:CDS | 55.0% | |
| AGCCATGGGGGCAACACTAT+AGG | + | 32568:18527-18546 | None:intergenic | 55.0% | |
| CAGGGAAGCCATGGATGAAG+AGG | + | 32568:17536-17555 | None:intergenic | 55.0% | |
| CCCCTCATCCTCTTCATCCA+TGG | - | 32568:17525-17544 | MS.gene035367:CDS | 55.0% | |
| CTCCTATAGTGTTGCCCCCA+TGG | - | 32568:18522-18541 | MS.gene035367:intron | 55.0% | |
| GAGCTCAATGCTCCATGGAC+TGG | - | 32568:18984-19003 | MS.gene035367:CDS | 55.0% | |
| GGACTTCTTGACGCCATTGC+TGG | - | 32568:17705-17724 | MS.gene035367:intron | 55.0% | |
| GGTGGCGCCATGAATACCAT+AGG | + | 32568:17560-17579 | None:intergenic | 55.0% | |
| GTGGTAGTAATCGAAGGGGC+AGG | - | 32568:19131-19150 | MS.gene035367:CDS | 55.0% | |
| TCCATGGCTTCCCTGACCTA+TGG | - | 32568:17541-17560 | MS.gene035367:CDS | 55.0% | |
| TGGAGGCTCGTGTAGGATGT+CGG | + | 32568:17666-17685 | None:intergenic | 55.0% | |
| ! | ATTGGGGTGCCCTTACTGCT+TGG | - | 32568:17760-17779 | MS.gene035367:intron | 55.0% |
| !! | CAGTAAGGGCACCCCAATCA+TGG | + | 32568:17758-17777 | None:intergenic | 55.0% |
| !! | GAGAGATGTGCCACTTCTGG+AGG | - | 32568:19106-19125 | MS.gene035367:CDS | 55.0% |
| !! | TGTGCCACTTCTGGAGGATG+TGG | - | 32568:19112-19131 | MS.gene035367:CDS | 55.0% |
| GCTCGTGTAGGATGTCGGTG+AGG | + | 32568:17661-17680 | None:intergenic | 60.0% | |
| GGGCCACACAACGGTAACCA+TGG | + | 32568:17602-17621 | None:intergenic | 60.0% | |
| GTGTAGGATGTCGGTGAGGC+TGG | + | 32568:17657-17676 | None:intergenic | 60.0% | |
| TCTCCGTATCCGCGGAGATC+CGG | + | 32568:17624-17643 | None:intergenic | 60.0% | |
| TGGTTACCGTTGTGTGGCCC+CGG | - | 32568:17602-17621 | MS.gene035367:CDS | 60.0% | |
| CTCCGTATCCGCGGAGATCC+GGG | + | 32568:17623-17642 | None:intergenic | 65.0% | |
| GGAGATCCGGGGCCACACAA+CGG | + | 32568:17611-17630 | None:intergenic | 65.0% | |
| TCCGTATCCGCGGAGATCCG+GGG | + | 32568:17622-17641 | None:intergenic | 65.0% | |
| GCCCCGGATCTCCGCGGATA+CGG | - | 32568:17618-17637 | MS.gene035367:CDS | 70.0% | |
| TGTGTGGCCCCGGATCTCCG+CGG | - | 32568:17612-17631 | MS.gene035367:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 32568 | gene | 17447 | 19223 | 17447 | ID=MS.gene035367 |
| 32568 | mRNA | 17447 | 19223 | 17447 | ID=MS.gene035367.t1;Parent=MS.gene035367 |
| 32568 | exon | 18747 | 19223 | 18747 | ID=MS.gene035367.t1.exon1;Parent=MS.gene035367.t1 |
| 32568 | CDS | 18747 | 19223 | 18747 | ID=cds.MS.gene035367.t1;Parent=MS.gene035367.t1 |
| 32568 | exon | 18037 | 18278 | 18037 | ID=MS.gene035367.t1.exon2;Parent=MS.gene035367.t1 |
| 32568 | CDS | 18037 | 18278 | 18037 | ID=cds.MS.gene035367.t1;Parent=MS.gene035367.t1 |
| 32568 | exon | 17447 | 17693 | 17447 | ID=MS.gene035367.t1.exon3;Parent=MS.gene035367.t1 |
| 32568 | CDS | 17447 | 17693 | 17447 | ID=cds.MS.gene035367.t1;Parent=MS.gene035367.t1 |
| Gene Sequence |
| Protein sequence |
