Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071504.t1 | KEH32298.1 | 96.6 | 321 | 11 | 0 | 1 | 321 | 35 | 355 | 5.50E-190 | 673.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071504.t1 | I6YGS0 | 36.2 | 320 | 182 | 7 | 9 | 317 | 7 | 315 | 4.9e-54 | 213.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071504.t1 | A0A072UTA2 | 96.6 | 321 | 11 | 0 | 1 | 321 | 35 | 355 | 4.0e-190 | 673.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071504.t1 | MTR_4g120240 | 96.573 | 321 | 11 | 0 | 1 | 321 | 35 | 355 | 0.0 | 649 |
| MS.gene071504.t1 | MTR_7g108825 | 61.129 | 319 | 122 | 1 | 3 | 321 | 1 | 317 | 3.17e-148 | 419 |
| MS.gene071504.t1 | MTR_7g112970 | 61.250 | 320 | 119 | 3 | 3 | 321 | 1 | 316 | 5.11e-148 | 419 |
| MS.gene071504.t1 | MTR_7g113020 | 61.994 | 321 | 118 | 3 | 3 | 321 | 1 | 319 | 2.17e-146 | 415 |
| MS.gene071504.t1 | MTR_7g112960 | 61.682 | 321 | 119 | 3 | 3 | 321 | 1 | 319 | 6.34e-146 | 414 |
| MS.gene071504.t1 | MTR_7g112963 | 61.371 | 321 | 120 | 3 | 3 | 321 | 1 | 319 | 1.35e-145 | 413 |
| MS.gene071504.t1 | MTR_7g113050 | 60.125 | 321 | 124 | 3 | 3 | 321 | 1 | 319 | 2.62e-144 | 409 |
| MS.gene071504.t1 | MTR_7g112615 | 60.436 | 321 | 123 | 3 | 3 | 321 | 1 | 319 | 5.10e-144 | 409 |
| MS.gene071504.t1 | MTR_7g113030 | 59.813 | 321 | 125 | 3 | 3 | 321 | 1 | 319 | 1.81e-143 | 407 |
| MS.gene071504.t1 | MTR_7g112620 | 59.190 | 321 | 127 | 3 | 3 | 321 | 1 | 319 | 5.58e-141 | 401 |
| MS.gene071504.t1 | MTR_4g005160 | 56.481 | 324 | 134 | 4 | 3 | 321 | 1 | 322 | 7.06e-133 | 380 |
| MS.gene071504.t1 | MTR_7g113010 | 61.131 | 283 | 106 | 3 | 3 | 283 | 1 | 281 | 8.94e-124 | 367 |
| MS.gene071504.t1 | MTR_7g113050 | 61.667 | 240 | 88 | 3 | 3 | 240 | 1 | 238 | 9.58e-106 | 308 |
| MS.gene071504.t1 | MTR_8g076680 | 47.352 | 321 | 165 | 3 | 1 | 321 | 1 | 317 | 3.57e-105 | 310 |
| MS.gene071504.t1 | MTR_7g112615 | 61.250 | 240 | 89 | 3 | 3 | 240 | 1 | 238 | 2.68e-104 | 305 |
| MS.gene071504.t1 | MTR_7g108825 | 59.244 | 238 | 95 | 1 | 3 | 240 | 1 | 236 | 2.56e-102 | 300 |
| MS.gene071504.t1 | MTR_8g076680 | 49.167 | 240 | 120 | 1 | 1 | 240 | 1 | 238 | 3.87e-81 | 246 |
| MS.gene071504.t1 | MTR_7g112615 | 63.529 | 170 | 58 | 3 | 3 | 170 | 1 | 168 | 7.80e-73 | 223 |
| MS.gene071504.t1 | MTR_1g083480 | 60.625 | 160 | 58 | 2 | 3 | 159 | 1 | 158 | 1.16e-67 | 209 |
| MS.gene071504.t1 | MTR_2g090245 | 36.025 | 322 | 190 | 9 | 3 | 320 | 1 | 310 | 4.21e-59 | 192 |
| MS.gene071504.t1 | MTR_2g090240 | 34.161 | 322 | 196 | 8 | 3 | 320 | 1 | 310 | 7.05e-59 | 192 |
| MS.gene071504.t1 | MTR_4g089060 | 34.675 | 323 | 192 | 9 | 3 | 320 | 1 | 309 | 3.56e-58 | 190 |
| MS.gene071504.t1 | MTR_4g089040 | 33.022 | 321 | 200 | 7 | 3 | 320 | 1 | 309 | 2.61e-56 | 185 |
| MS.gene071504.t1 | MTR_4g089060 | 32.286 | 350 | 191 | 10 | 3 | 320 | 1 | 336 | 4.78e-53 | 177 |
| MS.gene071504.t1 | MTR_7g112910 | 41.129 | 248 | 88 | 7 | 76 | 321 | 4 | 195 | 1.19e-50 | 167 |
| MS.gene071504.t1 | MTR_4g089060 | 35.745 | 235 | 138 | 6 | 3 | 233 | 1 | 226 | 2.24e-45 | 154 |
| MS.gene071504.t1 | MTR_3g024250 | 57.009 | 107 | 44 | 1 | 49 | 155 | 3 | 107 | 8.71e-36 | 126 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071504.t1 | AT4G02340 | 59.561 | 319 | 126 | 2 | 3 | 321 | 1 | 316 | 4.36e-149 | 422 |
| MS.gene071504.t1 | AT4G15960 | 58.951 | 324 | 128 | 1 | 3 | 321 | 51 | 374 | 6.67e-149 | 423 |
| MS.gene071504.t1 | AT3G05600 | 56.481 | 324 | 136 | 2 | 3 | 321 | 1 | 324 | 2.71e-140 | 400 |
| MS.gene071504.t1 | AT2G26740 | 57.632 | 321 | 131 | 3 | 6 | 321 | 1 | 321 | 9.38e-130 | 373 |
| MS.gene071504.t1 | AT2G26750 | 55.625 | 320 | 138 | 2 | 6 | 321 | 1 | 320 | 5.77e-127 | 365 |
| MS.gene071504.t1 | AT4G15955 | 54.321 | 324 | 114 | 4 | 7 | 321 | 6 | 304 | 9.80e-123 | 354 |
| MS.gene071504.t1 | AT3G05600 | 56.790 | 243 | 100 | 2 | 3 | 240 | 1 | 243 | 5.44e-100 | 294 |
| MS.gene071504.t1 | AT3G51000 | 45.938 | 320 | 166 | 5 | 5 | 321 | 4 | 319 | 8.64e-100 | 296 |
| MS.gene071504.t1 | AT4G15955 | 63.793 | 174 | 54 | 2 | 7 | 171 | 6 | 179 | 1.31e-79 | 240 |
| MS.gene071504.t1 | AT4G15955 | 63.636 | 165 | 51 | 2 | 7 | 162 | 6 | 170 | 3.84e-74 | 226 |
Find 0 sgRNAs with CRISPR-Local
Find 150 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CTAAATAGTTTTGAATTTTT+TGG | + | 32564:8468-8487 | MS.gene071504:intron | 15.0% |
| !!! | TTTTTTTACAGTAAAATCTA+TGG | + | 32564:9153-9172 | MS.gene071504:intron | 15.0% |
| !! | AACAATCAAATTTATCTCAT+TGG | - | 32564:9303-9322 | None:intergenic | 20.0% |
| !! | ATTTGATCAAGTAAATACTA+AGG | - | 32564:8447-8466 | None:intergenic | 20.0% |
| !! | TAATGAGTTAGTAAGAAATA+TGG | + | 32564:9251-9270 | MS.gene071504:intron | 20.0% |
| !! | TTTGATCAAGTAAATACTAA+GGG | - | 32564:8446-8465 | None:intergenic | 20.0% |
| !!! | AATTTTTTAATTGAGCAAAC+CGG | + | 32564:8627-8646 | MS.gene071504:intron | 20.0% |
| !!! | TTTACTTTGAAAATCATGAT+CGG | + | 32564:8686-8705 | MS.gene071504:intron | 20.0% |
| ! | AATATACACATAGCTGAAAA+GGG | + | 32564:7938-7957 | MS.gene071504:CDS | 25.0% |
| ! | ATGTACAAACCTTAAATCTA+AGG | - | 32564:8406-8425 | None:intergenic | 25.0% |
| ! | TGTACAAACCTTAAATCTAA+GGG | - | 32564:8405-8424 | None:intergenic | 25.0% |
| ! | TTTACAGTAAAATCTATGGA+GGG | + | 32564:9157-9176 | MS.gene071504:intron | 25.0% |
| !! | CAAAGATATATTGTTCTAAG+TGG | + | 32564:8785-8804 | MS.gene071504:intron | 25.0% |
| !! | TTTTACAGTAAAATCTATGG+AGG | + | 32564:9156-9175 | MS.gene071504:intron | 25.0% |
| !!! | TTTTTTCAGATGTCTACTTT+CGG | - | 32564:8600-8619 | None:intergenic | 25.0% |
| AACACTATAGGAGAATCATT+TGG | - | 32564:8958-8977 | None:intergenic | 30.0% | |
| AATAAAGGATACCTGAAATC+TGG | - | 32564:8359-8378 | None:intergenic | 30.0% | |
| ATTACCATAAACTGCTCTAA+GGG | - | 32564:8323-8342 | None:intergenic | 30.0% | |
| CAATATACACATAGCTGAAA+AGG | + | 32564:7937-7956 | MS.gene071504:CDS | 30.0% | |
| GTAAGTTTATCTTCAACTCT+AGG | + | 32564:9077-9096 | MS.gene071504:intron | 30.0% | |
| TCTGTCAATTGCAATATTAC+AGG | + | 32564:8813-8832 | MS.gene071504:intron | 30.0% | |
| TGTCTCTATCAATGTTTCAT+AGG | + | 32564:9343-9362 | MS.gene071504:intron | 30.0% | |
| ! | ATTCTTGTTGTAATAGCCAT+GGG | - | 32564:8984-9003 | None:intergenic | 30.0% |
| AGAGATTACATTCACAAAGG+TGG | + | 32564:9520-9539 | MS.gene071504:CDS | 35.0% | |
| AGGATGTGGTAGTAATTGAA+GGG | + | 32564:9569-9588 | MS.gene071504:CDS | 35.0% | |
| AGTTCCAGTGAAGTTTATAG+TGG | + | 32564:9462-9481 | MS.gene071504:CDS | 35.0% | |
| ATCTAAGGGAGCTTATCTAT+AGG | - | 32564:8391-8410 | None:intergenic | 35.0% | |
| CAAATGCAAGAGAAGCAATA+TGG | - | 32564:9397-9416 | None:intergenic | 35.0% | |
| CATTACCATAAACTGCTCTA+AGG | - | 32564:8324-8343 | None:intergenic | 35.0% | |
| CTACTATATCTCCAGATTTC+AGG | + | 32564:8345-8364 | MS.gene071504:CDS | 35.0% | |
| CTCTTGCATTTGTAGAAACT+GGG | + | 32564:9405-9424 | MS.gene071504:intron | 35.0% | |
| CTTTATCTACCTAAGGGTAA+AGG | + | 32564:8922-8941 | MS.gene071504:CDS | 35.0% | |
| GAGATTACATTCACAAAGGT+GGG | + | 32564:9521-9540 | MS.gene071504:CDS | 35.0% | |
| GATAAGCTCCCTTAGATTTA+AGG | + | 32564:8394-8413 | MS.gene071504:intron | 35.0% | |
| GATAAGTCAGAAATTCCTTC+AGG | - | 32564:8888-8907 | None:intergenic | 35.0% | |
| GCAAGAGATTACATTCACAA+AGG | + | 32564:9517-9536 | MS.gene071504:CDS | 35.0% | |
| GTGTATATTGATGCCATTGA+CGG | - | 32564:7927-7946 | None:intergenic | 35.0% | |
| GTTCCAGTGAAGTTTATAGT+GGG | + | 32564:9463-9482 | MS.gene071504:CDS | 35.0% | |
| TCTAAGGGAGCTTATCTATA+GGG | - | 32564:8390-8409 | None:intergenic | 35.0% | |
| TCTCTTGCATTTGTAGAAAC+TGG | + | 32564:9404-9423 | MS.gene071504:intron | 35.0% | |
| TTACCCTTAGGTAGATAAAG+TGG | - | 32564:8922-8941 | None:intergenic | 35.0% | |
| ! | CATTCTTGTTGTAATAGCCA+TGG | - | 32564:8985-9004 | None:intergenic | 35.0% |
| ! | GTATCAAGAGGCTTTCTTTT+GGG | - | 32564:8301-8320 | None:intergenic | 35.0% |
| ! | TATCAAGAGGCTTTCTTTTG+GGG | - | 32564:8300-8319 | None:intergenic | 35.0% |
| ! | TCCAGTCTTGTCAAATTTAG+AGG | - | 32564:9019-9038 | None:intergenic | 35.0% |
| ! | TGATCGGAATTTTCGAAATG+TGG | + | 32564:8702-8721 | MS.gene071504:intron | 35.0% |
| ! | TTCTTGTTGTAATAGCCATG+GGG | - | 32564:8983-9002 | None:intergenic | 35.0% |
| !! | CATATCGTTGGTGATATCAT+CGG | + | 32564:8127-8146 | MS.gene071504:CDS | 35.0% |
| !!! | GTGGATTGGTGTAGTTATTT+TGG | + | 32564:8758-8777 | MS.gene071504:intron | 35.0% |
| AACTCTGCTTCTATATCACC+AGG | - | 32564:8841-8860 | None:intergenic | 40.0% | |
| AAGCTAGATATGTGATCTGG+TGG | - | 32564:8021-8040 | None:intergenic | 40.0% | |
| ACAAGAGCCTTGATTCTTTC+AGG | - | 32564:8247-8266 | None:intergenic | 40.0% | |
| AGCTTATCTATAGGGACTGA+GGG | - | 32564:8382-8401 | None:intergenic | 40.0% | |
| ATTGCAATATTACAGGAGCC+TGG | + | 32564:8820-8839 | MS.gene071504:intron | 40.0% | |
| CAAGAGCCTTGATTCTTTCA+GGG | - | 32564:8246-8265 | None:intergenic | 40.0% | |
| CAATCCACAAAAACTCAGCA+TGG | - | 32564:8746-8765 | None:intergenic | 40.0% | |
| CATGTTTGATCAGTAAGTGC+CGG | - | 32564:8649-8668 | None:intergenic | 40.0% | |
| CGATGATATCACCAACGATA+TGG | - | 32564:8129-8148 | None:intergenic | 40.0% | |
| GAGGATGTGGTAGTAATTGA+AGG | + | 32564:9568-9587 | MS.gene071504:CDS | 40.0% | |
| GATACCCTTAGAGCAGTTTA+TGG | + | 32564:8316-8335 | MS.gene071504:CDS | 40.0% | |
| GCACTTCATCCATCAAGAAA+GGG | + | 32564:9597-9616 | MS.gene071504:CDS | 40.0% | |
| GCCTCTAAATTTGACAAGAC+TGG | + | 32564:9015-9034 | MS.gene071504:CDS | 40.0% | |
| GGAAAGATACCAAGCAGTAA+GGG | - | 32564:8215-8234 | None:intergenic | 40.0% | |
| GGATGTGGTAGTAATTGAAG+GGG | + | 32564:9570-9589 | MS.gene071504:CDS | 40.0% | |
| GGTCCACTTTATCTACCTAA+GGG | + | 32564:8916-8935 | MS.gene071504:CDS | 40.0% | |
| TAGGTAGATAAAGTGGACCA+GGG | - | 32564:8915-8934 | None:intergenic | 40.0% | |
| TATAGGGACTGAGGGAATAA+AGG | - | 32564:8374-8393 | None:intergenic | 40.0% | |
| TCACCCACTATAAACTTCAC+TGG | - | 32564:9469-9488 | None:intergenic | 40.0% | |
| TCTTATCAGCCCTTTCTTGA+TGG | - | 32564:9609-9628 | None:intergenic | 40.0% | |
| TGATATCACCAACGATATGG+AGG | - | 32564:8126-8145 | None:intergenic | 40.0% | |
| TGCCATTGACGGTTACAATT+CGG | - | 32564:7916-7935 | None:intergenic | 40.0% | |
| TGGTCCACTTTATCTACCTA+AGG | + | 32564:8915-8934 | MS.gene071504:CDS | 40.0% | |
| TGTCCAAAACCTTTACCCTT+AGG | - | 32564:8934-8953 | None:intergenic | 40.0% | |
| TTAGGTAGATAAAGTGGACC+AGG | - | 32564:8916-8935 | None:intergenic | 40.0% | |
| TTGACAAGACTGGATTCACA+GGG | + | 32564:9025-9044 | MS.gene071504:CDS | 40.0% | |
| TTTGACAAGACTGGATTCAC+AGG | + | 32564:9024-9043 | MS.gene071504:CDS | 40.0% | |
| ! | ATCACATATCTAGCTTGCCA+TGG | + | 32564:8025-8044 | MS.gene071504:CDS | 40.0% |
| ! | CAATCCATGCTGAGTTTTTG+TGG | + | 32564:8739-8758 | MS.gene071504:intron | 40.0% |
| ! | CATGCTGAGTTTTTGTGGAT+TGG | + | 32564:8744-8763 | MS.gene071504:intron | 40.0% |
| ! | CTACCTAAGGGTAAAGGTTT+TGG | + | 32564:8928-8947 | MS.gene071504:CDS | 40.0% |
| ! | GGAATTTTCGAAATGTGGAG+TGG | + | 32564:8707-8726 | MS.gene071504:intron | 40.0% |
| ! | GGTATCAAGAGGCTTTCTTT+TGG | - | 32564:8302-8321 | None:intergenic | 40.0% |
| ! | TCTTGTTGTAATAGCCATGG+GGG | - | 32564:8982-9001 | None:intergenic | 40.0% |
| !! | CAAGAGAAGGTGTTTGTTGT+GGG | + | 32564:8175-8194 | MS.gene071504:CDS | 40.0% |
| !! | TCAAGAGAAGGTGTTTGTTG+TGG | + | 32564:8174-8193 | MS.gene071504:CDS | 40.0% |
| CACATAGCTGAAAAGGGTCA+AGG | + | 32564:7944-7963 | MS.gene071504:CDS | 45.0% | |
| CACCGAATTGTAACCGTCAA+TGG | + | 32564:7911-7930 | MS.gene071504:CDS | 45.0% | |
| CATTGCTGGTGATCAAGAGA+AGG | + | 32564:8162-8181 | MS.gene071504:CDS | 45.0% | |
| CGGCACTTACTGATCAAACA+TGG | + | 32564:8647-8666 | MS.gene071504:intron | 45.0% | |
| CTATCGCCCTGAAAGAATCA+AGG | + | 32564:8237-8256 | MS.gene071504:CDS | 45.0% | |
| CTTCTCTTGATCACCAGCAA+TGG | - | 32564:8164-8183 | None:intergenic | 45.0% | |
| GACCTTACCTATAATGCACC+TGG | + | 32564:9493-9512 | MS.gene071504:CDS | 45.0% | |
| GAGCTTATCTATAGGGACTG+AGG | - | 32564:8383-8402 | None:intergenic | 45.0% | |
| GATTCTTTCAGGGCGATAGA+GGG | - | 32564:8236-8255 | None:intergenic | 45.0% | |
| GCCATGAATACCATAGGTCA+GGG | - | 32564:7997-8016 | None:intergenic | 45.0% | |
| GGCAAGCTAGATATGTGATC+TGG | - | 32564:8024-8043 | None:intergenic | 45.0% | |
| GGCACTTCATCCATCAAGAA+AGG | + | 32564:9596-9615 | MS.gene071504:CDS | 45.0% | |
| GGGAAAGATACCAAGCAGTA+AGG | - | 32564:8216-8235 | None:intergenic | 45.0% | |
| TCCCTGACCTATGGTATTCA+TGG | + | 32564:7993-8012 | MS.gene071504:CDS | 45.0% | |
| TGAATGTAATCTCTTGCGCC+AGG | - | 32564:9514-9533 | None:intergenic | 45.0% | |
| TGACAAGACTGGATTCACAG+GGG | + | 32564:9026-9045 | MS.gene071504:CDS | 45.0% | |
| TGATTCTTTCAGGGCGATAG+AGG | - | 32564:8237-8256 | None:intergenic | 45.0% | |
| TGGAACTGAAAGAGTCCTGA+AGG | + | 32564:8870-8889 | MS.gene071504:CDS | 45.0% | |
| TGGTAGTAATTGAAGGGGCA+GGG | + | 32564:9575-9594 | MS.gene071504:CDS | 45.0% | |
| TTTCTGACTTATCGCAACCC+TGG | + | 32564:8895-8914 | MS.gene071504:CDS | 45.0% | |
| ! | TTTGTTGTGGGCCATGATTG+GGG | + | 32564:8187-8206 | MS.gene071504:CDS | 45.0% |
| !! | ACTGCTCTAAGGGTATCAAG+AGG | - | 32564:8313-8332 | None:intergenic | 45.0% |
| !! | GAAGCAGAGTTTGCTGAGAT+TGG | + | 32564:8850-8869 | MS.gene071504:CDS | 45.0% |
| !! | GTTTGTTGTGGGCCATGATT+GGG | + | 32564:8186-8205 | MS.gene071504:CDS | 45.0% |
| !! | TGTTTGTTGTGGGCCATGAT+TGG | + | 32564:8185-8204 | MS.gene071504:CDS | 45.0% |
| !!! | GGCTTTCTTTTGGGGTTTCT+AGG | - | 32564:8292-8311 | None:intergenic | 45.0% |
| AACGATATGGAGGCTCGTGT+AGG | - | 32564:8116-8135 | None:intergenic | 50.0% | |
| ACTACCACATCCTCCAGAAG+TGG | - | 32564:9562-9581 | None:intergenic | 50.0% | |
| AGCCATGGATGAAGAGGATG+AGG | - | 32564:7973-7992 | None:intergenic | 50.0% | |
| CCATGGATGAAGAGGATGAG+GGG | - | 32564:7971-7990 | None:intergenic | 50.0% | |
| CGCCAGGTGCATTATAGGTA+AGG | - | 32564:9498-9517 | None:intergenic | 50.0% | |
| CGCCATGAATACCATAGGTC+AGG | - | 32564:7998-8017 | None:intergenic | 50.0% | |
| GCCATGGATGAAGAGGATGA+GGG | - | 32564:7972-7991 | None:intergenic | 50.0% | |
| GTGGTAGTAATTGAAGGGGC+AGG | + | 32564:9574-9593 | MS.gene071504:CDS | 50.0% | |
| TACACGAGCCTCCATATCGT+TGG | + | 32564:8115-8134 | MS.gene071504:CDS | 50.0% | |
| TATCAGTGTCTCCGTATCCG+CGG | - | 32564:8075-8094 | None:intergenic | 50.0% | |
| TCTTGCGCCAGGTGCATTAT+AGG | - | 32564:9503-9522 | None:intergenic | 50.0% | |
| TTGCCATGGTTACCGTTGTG+TGG | + | 32564:8039-8058 | MS.gene071504:CDS | 50.0% | |
| ! | TTGACTTGAGCACCAGTCCA+TGG | - | 32564:9442-9461 | None:intergenic | 50.0% |
| !! | GAAGAGAGATGTGCCACTTC+TGG | + | 32564:9546-9565 | MS.gene071504:CDS | 50.0% |
| ACCATAGGTCAGGGAAGCCA+TGG | - | 32564:7988-8007 | None:intergenic | 55.0% | |
| ACTGGGAGCTCAATGCTCCA+TGG | + | 32564:9422-9441 | MS.gene071504:CDS | 55.0% | |
| AGCCATGGGGGCAACACTAT+AGG | - | 32564:8970-8989 | None:intergenic | 55.0% | |
| CAGGGAAGCCATGGATGAAG+AGG | - | 32564:7979-7998 | None:intergenic | 55.0% | |
| CCCCTCATCCTCTTCATCCA+TGG | + | 32564:7968-7987 | MS.gene071504:CDS | 55.0% | |
| CTCCTATAGTGTTGCCCCCA+TGG | + | 32564:8965-8984 | MS.gene071504:CDS | 55.0% | |
| GAGCTCAATGCTCCATGGAC+TGG | + | 32564:9427-9446 | MS.gene071504:CDS | 55.0% | |
| GGACTTCTTGACGCCATTGC+TGG | + | 32564:8148-8167 | MS.gene071504:CDS | 55.0% | |
| GGTGGCGCCATGAATACCAT+AGG | - | 32564:8003-8022 | None:intergenic | 55.0% | |
| TCCATGGCTTCCCTGACCTA+TGG | + | 32564:7984-8003 | MS.gene071504:CDS | 55.0% | |
| TGGAGGCTCGTGTAGGATGT+CGG | - | 32564:8109-8128 | None:intergenic | 55.0% | |
| ! | ATTGGGGTGCCCTTACTGCT+TGG | + | 32564:8203-8222 | MS.gene071504:CDS | 55.0% |
| !! | CAGTAAGGGCACCCCAATCA+TGG | - | 32564:8201-8220 | None:intergenic | 55.0% |
| !! | GAGAGATGTGCCACTTCTGG+AGG | + | 32564:9549-9568 | MS.gene071504:CDS | 55.0% |
| !! | TGTGCCACTTCTGGAGGATG+TGG | + | 32564:9555-9574 | MS.gene071504:CDS | 55.0% |
| GCTCGTGTAGGATGTCGGTG+AGG | - | 32564:8104-8123 | None:intergenic | 60.0% | |
| GGGCCACACAACGGTAACCA+TGG | - | 32564:8045-8064 | None:intergenic | 60.0% | |
| GTGTAGGATGTCGGTGAGGC+TGG | - | 32564:8100-8119 | None:intergenic | 60.0% | |
| TCTCCGTATCCGCGGAGATC+CGG | - | 32564:8067-8086 | None:intergenic | 60.0% | |
| TGGTTACCGTTGTGTGGCCC+CGG | + | 32564:8045-8064 | MS.gene071504:CDS | 60.0% | |
| CTCCGTATCCGCGGAGATCC+GGG | - | 32564:8066-8085 | None:intergenic | 65.0% | |
| GGAGATCCGGGGCCACACAA+CGG | - | 32564:8054-8073 | None:intergenic | 65.0% | |
| TCCGTATCCGCGGAGATCCG+GGG | - | 32564:8065-8084 | None:intergenic | 65.0% | |
| GCCCCGGATCTCCGCGGATA+CGG | + | 32564:8061-8080 | MS.gene071504:CDS | 70.0% | |
| TGTGTGGCCCCGGATCTCCG+CGG | + | 32564:8055-8074 | MS.gene071504:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 32564 | gene | 7890 | 9666 | 7890 | ID=MS.gene071504 |
| 32564 | mRNA | 7890 | 9666 | 7890 | ID=MS.gene071504.t1;Parent=MS.gene071504 |
| 32564 | exon | 7890 | 8366 | 7890 | ID=MS.gene071504.t1.exon1;Parent=MS.gene071504.t1 |
| 32564 | CDS | 7890 | 8366 | 7890 | ID=cds.MS.gene071504.t1;Parent=MS.gene071504.t1 |
| 32564 | exon | 8835 | 9076 | 8835 | ID=MS.gene071504.t1.exon2;Parent=MS.gene071504.t1 |
| 32564 | CDS | 8835 | 9076 | 8835 | ID=cds.MS.gene071504.t1;Parent=MS.gene071504.t1 |
| 32564 | exon | 9420 | 9666 | 9420 | ID=MS.gene071504.t1.exon3;Parent=MS.gene071504.t1 |
| 32564 | CDS | 9420 | 9666 | 9420 | ID=cds.MS.gene071504.t1;Parent=MS.gene071504.t1 |
| Gene Sequence |
| Protein sequence |
