Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066360.t1 | KEH32298.1 | 96.6 | 321 | 11 | 0 | 1 | 321 | 35 | 355 | 5.50E-190 | 673.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066360.t1 | I6YGS0 | 36.2 | 320 | 182 | 7 | 9 | 317 | 7 | 315 | 4.9e-54 | 213.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066360.t1 | A0A072UTA2 | 96.6 | 321 | 11 | 0 | 1 | 321 | 35 | 355 | 4.0e-190 | 673.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066360.t1 | MTR_4g120240 | 96.573 | 321 | 11 | 0 | 1 | 321 | 35 | 355 | 0.0 | 649 |
| MS.gene066360.t1 | MTR_7g108825 | 61.129 | 319 | 122 | 1 | 3 | 321 | 1 | 317 | 3.17e-148 | 419 |
| MS.gene066360.t1 | MTR_7g112970 | 61.250 | 320 | 119 | 3 | 3 | 321 | 1 | 316 | 5.11e-148 | 419 |
| MS.gene066360.t1 | MTR_7g113020 | 61.994 | 321 | 118 | 3 | 3 | 321 | 1 | 319 | 2.17e-146 | 415 |
| MS.gene066360.t1 | MTR_7g112960 | 61.682 | 321 | 119 | 3 | 3 | 321 | 1 | 319 | 6.34e-146 | 414 |
| MS.gene066360.t1 | MTR_7g112963 | 61.371 | 321 | 120 | 3 | 3 | 321 | 1 | 319 | 1.35e-145 | 413 |
| MS.gene066360.t1 | MTR_7g113050 | 60.125 | 321 | 124 | 3 | 3 | 321 | 1 | 319 | 2.62e-144 | 409 |
| MS.gene066360.t1 | MTR_7g112615 | 60.436 | 321 | 123 | 3 | 3 | 321 | 1 | 319 | 5.10e-144 | 409 |
| MS.gene066360.t1 | MTR_7g113030 | 59.813 | 321 | 125 | 3 | 3 | 321 | 1 | 319 | 1.81e-143 | 407 |
| MS.gene066360.t1 | MTR_7g112620 | 59.190 | 321 | 127 | 3 | 3 | 321 | 1 | 319 | 5.58e-141 | 401 |
| MS.gene066360.t1 | MTR_4g005160 | 56.481 | 324 | 134 | 4 | 3 | 321 | 1 | 322 | 7.06e-133 | 380 |
| MS.gene066360.t1 | MTR_7g113010 | 61.131 | 283 | 106 | 3 | 3 | 283 | 1 | 281 | 8.94e-124 | 367 |
| MS.gene066360.t1 | MTR_7g113050 | 61.667 | 240 | 88 | 3 | 3 | 240 | 1 | 238 | 9.58e-106 | 308 |
| MS.gene066360.t1 | MTR_8g076680 | 47.352 | 321 | 165 | 3 | 1 | 321 | 1 | 317 | 3.57e-105 | 310 |
| MS.gene066360.t1 | MTR_7g112615 | 61.250 | 240 | 89 | 3 | 3 | 240 | 1 | 238 | 2.68e-104 | 305 |
| MS.gene066360.t1 | MTR_7g108825 | 59.244 | 238 | 95 | 1 | 3 | 240 | 1 | 236 | 2.56e-102 | 300 |
| MS.gene066360.t1 | MTR_8g076680 | 49.167 | 240 | 120 | 1 | 1 | 240 | 1 | 238 | 3.87e-81 | 246 |
| MS.gene066360.t1 | MTR_7g112615 | 63.529 | 170 | 58 | 3 | 3 | 170 | 1 | 168 | 7.80e-73 | 223 |
| MS.gene066360.t1 | MTR_1g083480 | 60.625 | 160 | 58 | 2 | 3 | 159 | 1 | 158 | 1.16e-67 | 209 |
| MS.gene066360.t1 | MTR_2g090245 | 36.025 | 322 | 190 | 9 | 3 | 320 | 1 | 310 | 4.21e-59 | 192 |
| MS.gene066360.t1 | MTR_2g090240 | 34.161 | 322 | 196 | 8 | 3 | 320 | 1 | 310 | 7.05e-59 | 192 |
| MS.gene066360.t1 | MTR_4g089060 | 34.675 | 323 | 192 | 9 | 3 | 320 | 1 | 309 | 3.56e-58 | 190 |
| MS.gene066360.t1 | MTR_4g089040 | 33.022 | 321 | 200 | 7 | 3 | 320 | 1 | 309 | 2.61e-56 | 185 |
| MS.gene066360.t1 | MTR_4g089060 | 32.286 | 350 | 191 | 10 | 3 | 320 | 1 | 336 | 4.78e-53 | 177 |
| MS.gene066360.t1 | MTR_7g112910 | 41.129 | 248 | 88 | 7 | 76 | 321 | 4 | 195 | 1.19e-50 | 167 |
| MS.gene066360.t1 | MTR_4g089060 | 35.745 | 235 | 138 | 6 | 3 | 233 | 1 | 226 | 2.24e-45 | 154 |
| MS.gene066360.t1 | MTR_3g024250 | 57.009 | 107 | 44 | 1 | 49 | 155 | 3 | 107 | 8.71e-36 | 126 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066360.t1 | AT4G02340 | 59.561 | 319 | 126 | 2 | 3 | 321 | 1 | 316 | 4.36e-149 | 422 |
| MS.gene066360.t1 | AT4G15960 | 58.951 | 324 | 128 | 1 | 3 | 321 | 51 | 374 | 6.67e-149 | 423 |
| MS.gene066360.t1 | AT3G05600 | 56.481 | 324 | 136 | 2 | 3 | 321 | 1 | 324 | 2.71e-140 | 400 |
| MS.gene066360.t1 | AT2G26740 | 57.632 | 321 | 131 | 3 | 6 | 321 | 1 | 321 | 9.38e-130 | 373 |
| MS.gene066360.t1 | AT2G26750 | 55.625 | 320 | 138 | 2 | 6 | 321 | 1 | 320 | 5.77e-127 | 365 |
| MS.gene066360.t1 | AT4G15955 | 54.321 | 324 | 114 | 4 | 7 | 321 | 6 | 304 | 9.80e-123 | 354 |
| MS.gene066360.t1 | AT3G05600 | 56.790 | 243 | 100 | 2 | 3 | 240 | 1 | 243 | 5.44e-100 | 294 |
| MS.gene066360.t1 | AT3G51000 | 45.938 | 320 | 166 | 5 | 5 | 321 | 4 | 319 | 8.64e-100 | 296 |
| MS.gene066360.t1 | AT4G15955 | 63.793 | 174 | 54 | 2 | 7 | 171 | 6 | 179 | 1.31e-79 | 240 |
| MS.gene066360.t1 | AT4G15955 | 63.636 | 165 | 51 | 2 | 7 | 162 | 6 | 170 | 3.84e-74 | 226 |
Find 0 sgRNAs with CRISPR-Local
Find 149 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CTAAATAGTTTTGAATTTTT+TGG | + | 32565:6290-6309 | MS.gene066360:intron | 15.0% |
| !!! | TTTTTTTACAGTAAAATCTA+TGG | + | 32565:6974-6993 | MS.gene066360:intron | 15.0% |
| !! | AACAATCAAATTTATCTCAT+TGG | - | 32565:7123-7142 | MS.gene066360:intergenic | 20.0% |
| !! | ATTTGATCAAGTAAATACTA+AGG | - | 32565:6269-6288 | MS.gene066360:intergenic | 20.0% |
| !! | TAATGAGTTAGTAAGAAATA+TGG | + | 32565:7072-7091 | MS.gene066360:intron | 20.0% |
| !!! | AATTTTTTAATTGAGCAAAC+CGG | + | 32565:6448-6467 | MS.gene066360:intron | 20.0% |
| !!! | TTTACTTTGAAAATCATGAT+CGG | + | 32565:6507-6526 | MS.gene066360:intron | 20.0% |
| ! | AATATACACATAGCTGAAAA+GGG | + | 32565:5761-5780 | MS.gene066360:CDS | 25.0% |
| ! | ATGTACAAACCTTAAATCTA+AGG | - | 32565:6229-6248 | MS.gene066360:intergenic | 25.0% |
| ! | TGTACAAACCTTAAATCTAA+GGG | - | 32565:6228-6247 | MS.gene066360:intergenic | 25.0% |
| ! | TTTACAGTAAAATCTATGGA+GGG | + | 32565:6978-6997 | MS.gene066360:intron | 25.0% |
| !! | CAAAGATATATTGTTCTAAG+TGG | + | 32565:6606-6625 | MS.gene066360:intron | 25.0% |
| !! | TTTTACAGTAAAATCTATGG+AGG | + | 32565:6977-6996 | MS.gene066360:intron | 25.0% |
| !!! | ATTTTTTCAGATGTCACTTT+CGG | - | 32565:6422-6441 | MS.gene066360:intergenic | 25.0% |
| AACACTATAGGAGAATCATT+TGG | - | 32565:6779-6798 | None:intergenic | 30.0% | |
| AATAAAGGATACCTGAAATC+TGG | - | 32565:6182-6201 | None:intergenic | 30.0% | |
| ATTACCATAAACTGCTCTAA+GGG | - | 32565:6146-6165 | MS.gene066360:intergenic | 30.0% | |
| CAATATACACATAGCTGAAA+AGG | + | 32565:5760-5779 | MS.gene066360:CDS | 30.0% | |
| GTAAGTTTATCTTCAACTCT+AGG | + | 32565:6898-6917 | MS.gene066360:intron | 30.0% | |
| TCTGTCAATTGCAATATTAC+AGG | + | 32565:6634-6653 | MS.gene066360:intron | 30.0% | |
| TGTCTCTATCAATGTTTCAT+AGG | + | 32565:7164-7183 | MS.gene066360:intron | 30.0% | |
| ! | ATTCTTGTTGTAATAGCCAT+GGG | - | 32565:6805-6824 | MS.gene066360:intergenic | 30.0% |
| AGAGATTACATTCACAAAGG+TGG | + | 32565:7341-7360 | MS.gene066360:CDS | 35.0% | |
| AGGATGTGGTAGTAATTGAA+GGG | + | 32565:7390-7409 | MS.gene066360:CDS | 35.0% | |
| AGTTCCAGTGAAGTTTATAG+TGG | + | 32565:7283-7302 | MS.gene066360:CDS | 35.0% | |
| ATCTAAGGGAGCTTATCTAT+AGG | - | 32565:6214-6233 | MS.gene066360:intergenic | 35.0% | |
| CAAATGCAAGAGAAGCAATA+TGG | - | 32565:7218-7237 | MS.gene066360:intergenic | 35.0% | |
| CATTACCATAAACTGCTCTA+AGG | - | 32565:6147-6166 | MS.gene066360:intergenic | 35.0% | |
| CTACTATATCTCCAGATTTC+AGG | + | 32565:6168-6187 | MS.gene066360:CDS | 35.0% | |
| CTCTTGCATTTGTAGAAACT+GGG | + | 32565:7226-7245 | MS.gene066360:intron | 35.0% | |
| CTTTATCTACCTAAGGGTAA+AGG | + | 32565:6743-6762 | MS.gene066360:CDS | 35.0% | |
| GAGATTACATTCACAAAGGT+GGG | + | 32565:7342-7361 | MS.gene066360:CDS | 35.0% | |
| GATAAGCTCCCTTAGATTTA+AGG | + | 32565:6217-6236 | MS.gene066360:intron | 35.0% | |
| GATAAGTCAGAAATTCCTTC+AGG | - | 32565:6709-6728 | MS.gene066360:intergenic | 35.0% | |
| GCAAGAGATTACATTCACAA+AGG | + | 32565:7338-7357 | MS.gene066360:CDS | 35.0% | |
| GTGTATATTGATGCCATTGA+CGG | - | 32565:5750-5769 | MS.gene066360:intergenic | 35.0% | |
| GTTCCAGTGAAGTTTATAGT+GGG | + | 32565:7284-7303 | MS.gene066360:CDS | 35.0% | |
| TCTAAGGGAGCTTATCTATA+GGG | - | 32565:6213-6232 | MS.gene066360:intergenic | 35.0% | |
| TCTCTTGCATTTGTAGAAAC+TGG | + | 32565:7225-7244 | MS.gene066360:intron | 35.0% | |
| TTACCCTTAGGTAGATAAAG+TGG | - | 32565:6743-6762 | MS.gene066360:intergenic | 35.0% | |
| ! | CATTCTTGTTGTAATAGCCA+TGG | - | 32565:6806-6825 | MS.gene066360:intergenic | 35.0% |
| ! | GTATCAAGAGGCTTTCTTTT+GGG | - | 32565:6124-6143 | MS.gene066360:intergenic | 35.0% |
| ! | TATCAAGAGGCTTTCTTTTG+GGG | - | 32565:6123-6142 | MS.gene066360:intergenic | 35.0% |
| ! | TCCAGTCTTGTCAAATTTAG+AGG | - | 32565:6840-6859 | MS.gene066360:intergenic | 35.0% |
| ! | TGATCGGAATTTTCGAAATG+TGG | + | 32565:6523-6542 | MS.gene066360:intron | 35.0% |
| ! | TTCTTGTTGTAATAGCCATG+GGG | - | 32565:6804-6823 | MS.gene066360:intergenic | 35.0% |
| !! | CATATCGTTGGTGATATCAT+CGG | + | 32565:5950-5969 | MS.gene066360:CDS | 35.0% |
| !!! | GTGGATTGGTGTAGTTATTT+TGG | + | 32565:6579-6598 | MS.gene066360:intron | 35.0% |
| AACTCTGCTTCTATATCACC+AGG | - | 32565:6662-6681 | None:intergenic | 40.0% | |
| AAGCTAGATATGTGATCTGG+TGG | - | 32565:5844-5863 | None:intergenic | 40.0% | |
| ACAAGAGCCTTGATTCTTTC+AGG | - | 32565:6070-6089 | None:intergenic | 40.0% | |
| AGCTTATCTATAGGGACTGA+GGG | - | 32565:6205-6224 | MS.gene066360:intergenic | 40.0% | |
| ATTGCAATATTACAGGAGCC+TGG | + | 32565:6641-6660 | MS.gene066360:intron | 40.0% | |
| CAAGAGCCTTGATTCTTTCA+GGG | - | 32565:6069-6088 | MS.gene066360:intergenic | 40.0% | |
| CAATCCACAAAAACTCAGCA+TGG | - | 32565:6567-6586 | MS.gene066360:intergenic | 40.0% | |
| CATGTTTGATCAGTAAGTGC+CGG | - | 32565:6470-6489 | MS.gene066360:intergenic | 40.0% | |
| CGATGATATCACCAACGATA+TGG | - | 32565:5952-5971 | MS.gene066360:intergenic | 40.0% | |
| GAGGATGTGGTAGTAATTGA+AGG | + | 32565:7389-7408 | MS.gene066360:CDS | 40.0% | |
| GATACCCTTAGAGCAGTTTA+TGG | + | 32565:6139-6158 | MS.gene066360:CDS | 40.0% | |
| GCACTTCATCCATCAAGAAA+GGG | + | 32565:7418-7437 | MS.gene066360:CDS | 40.0% | |
| GCCTCTAAATTTGACAAGAC+TGG | + | 32565:6836-6855 | MS.gene066360:CDS | 40.0% | |
| GGAAAGATACCAAGCAGTAA+GGG | - | 32565:6038-6057 | MS.gene066360:intergenic | 40.0% | |
| GGATGTGGTAGTAATTGAAG+GGG | + | 32565:7391-7410 | MS.gene066360:CDS | 40.0% | |
| GGTCCACTTTATCTACCTAA+GGG | + | 32565:6737-6756 | MS.gene066360:CDS | 40.0% | |
| TAGGTAGATAAAGTGGACCA+GGG | - | 32565:6736-6755 | MS.gene066360:intergenic | 40.0% | |
| TATAGGGACTGAGGGAATAA+AGG | - | 32565:6197-6216 | MS.gene066360:intergenic | 40.0% | |
| TCACCCACTATAAACTTCAC+TGG | - | 32565:7290-7309 | MS.gene066360:intergenic | 40.0% | |
| TCTTATCAGCCCTTTCTTGA+TGG | - | 32565:7430-7449 | MS.gene066360:intergenic | 40.0% | |
| TGATATCACCAACGATATGG+AGG | - | 32565:5949-5968 | MS.gene066360:intergenic | 40.0% | |
| TGCCATTGACGGTTACAATT+CGG | - | 32565:5739-5758 | MS.gene066360:intergenic | 40.0% | |
| TGGTCCACTTTATCTACCTA+AGG | + | 32565:6736-6755 | MS.gene066360:CDS | 40.0% | |
| TGTCCAAAACCTTTACCCTT+AGG | - | 32565:6755-6774 | MS.gene066360:intergenic | 40.0% | |
| TTAGGTAGATAAAGTGGACC+AGG | - | 32565:6737-6756 | MS.gene066360:intergenic | 40.0% | |
| TTGACAAGACTGGATTCACA+GGG | + | 32565:6846-6865 | MS.gene066360:CDS | 40.0% | |
| TTTGACAAGACTGGATTCAC+AGG | + | 32565:6845-6864 | MS.gene066360:CDS | 40.0% | |
| ! | ATCACATATCTAGCTTGCCA+TGG | + | 32565:5848-5867 | MS.gene066360:CDS | 40.0% |
| ! | CAATCCATGCTGAGTTTTTG+TGG | + | 32565:6560-6579 | MS.gene066360:intron | 40.0% |
| ! | CATGCTGAGTTTTTGTGGAT+TGG | + | 32565:6565-6584 | MS.gene066360:intron | 40.0% |
| ! | CTACCTAAGGGTAAAGGTTT+TGG | + | 32565:6749-6768 | MS.gene066360:CDS | 40.0% |
| ! | GGAATTTTCGAAATGTGGAG+TGG | + | 32565:6528-6547 | MS.gene066360:intron | 40.0% |
| ! | GGTATCAAGAGGCTTTCTTT+TGG | - | 32565:6125-6144 | MS.gene066360:intergenic | 40.0% |
| ! | TCTTGTTGTAATAGCCATGG+GGG | - | 32565:6803-6822 | MS.gene066360:intergenic | 40.0% |
| !! | CAAGAGAAGGTGTTTGTTGT+GGG | + | 32565:5998-6017 | MS.gene066360:CDS | 40.0% |
| !! | TCAAGAGAAGGTGTTTGTTG+TGG | + | 32565:5997-6016 | MS.gene066360:CDS | 40.0% |
| CACATAGCTGAAAAGGGTCA+AGG | + | 32565:5767-5786 | MS.gene066360:CDS | 45.0% | |
| CACCGAATTGTAACCGTCAA+TGG | + | 32565:5734-5753 | MS.gene066360:CDS | 45.0% | |
| CATTGCTGGTGATCAAGAGA+AGG | + | 32565:5985-6004 | MS.gene066360:CDS | 45.0% | |
| CGGCACTTACTGATCAAACA+TGG | + | 32565:6468-6487 | MS.gene066360:intron | 45.0% | |
| CTATCGCCCTGAAAGAATCA+AGG | + | 32565:6060-6079 | MS.gene066360:CDS | 45.0% | |
| CTTCTCTTGATCACCAGCAA+TGG | - | 32565:5987-6006 | MS.gene066360:intergenic | 45.0% | |
| GACCTTACCTATAATGCACC+TGG | + | 32565:7314-7333 | MS.gene066360:CDS | 45.0% | |
| GAGCTTATCTATAGGGACTG+AGG | - | 32565:6206-6225 | MS.gene066360:intergenic | 45.0% | |
| GATTCTTTCAGGGCGATAGA+GGG | - | 32565:6059-6078 | MS.gene066360:intergenic | 45.0% | |
| GCCATGAATACCATAGGTCA+GGG | - | 32565:5820-5839 | MS.gene066360:intergenic | 45.0% | |
| GGCAAGCTAGATATGTGATC+TGG | - | 32565:5847-5866 | MS.gene066360:intergenic | 45.0% | |
| GGCACTTCATCCATCAAGAA+AGG | + | 32565:7417-7436 | MS.gene066360:CDS | 45.0% | |
| GGGAAAGATACCAAGCAGTA+AGG | - | 32565:6039-6058 | MS.gene066360:intergenic | 45.0% | |
| TCCCTGACCTATGGTATTCA+TGG | + | 32565:5816-5835 | MS.gene066360:CDS | 45.0% | |
| TGAATGTAATCTCTTGCGCC+AGG | - | 32565:7335-7354 | MS.gene066360:intergenic | 45.0% | |
| TGACAAGACTGGATTCACAG+GGG | + | 32565:6847-6866 | MS.gene066360:CDS | 45.0% | |
| TGATTCTTTCAGGGCGATAG+AGG | - | 32565:6060-6079 | MS.gene066360:intergenic | 45.0% | |
| TGGAACTGAAAGAGTCCTGA+AGG | + | 32565:6691-6710 | MS.gene066360:CDS | 45.0% | |
| TGGTAGTAATTGAAGGGGCA+GGG | + | 32565:7396-7415 | MS.gene066360:CDS | 45.0% | |
| TTTCTGACTTATCGCAACCC+TGG | + | 32565:6716-6735 | MS.gene066360:CDS | 45.0% | |
| ! | TTTGTTGTGGGCCATGATTG+GGG | + | 32565:6010-6029 | MS.gene066360:CDS | 45.0% |
| !! | ACTGCTCTAAGGGTATCAAG+AGG | - | 32565:6136-6155 | MS.gene066360:intergenic | 45.0% |
| !! | GAAGCAGAGTTTGCTGAGAT+TGG | + | 32565:6671-6690 | MS.gene066360:CDS | 45.0% |
| !! | GTTTGTTGTGGGCCATGATT+GGG | + | 32565:6009-6028 | MS.gene066360:CDS | 45.0% |
| !! | TGTTTGTTGTGGGCCATGAT+TGG | + | 32565:6008-6027 | MS.gene066360:CDS | 45.0% |
| !!! | GGCTTTCTTTTGGGGTTTCT+AGG | - | 32565:6115-6134 | MS.gene066360:intergenic | 45.0% |
| AACGATATGGAGGCTCGTGT+AGG | - | 32565:5939-5958 | None:intergenic | 50.0% | |
| ACTACCACATCCTCCAGAAG+TGG | - | 32565:7383-7402 | None:intergenic | 50.0% | |
| AGCCATGGATGAAGAGGATG+AGG | - | 32565:5796-5815 | MS.gene066360:intergenic | 50.0% | |
| CCATGGATGAAGAGGATGAG+GGG | - | 32565:5794-5813 | MS.gene066360:intergenic | 50.0% | |
| CGCCAGGTGCATTATAGGTA+AGG | - | 32565:7319-7338 | MS.gene066360:intergenic | 50.0% | |
| CGCCATGAATACCATAGGTC+AGG | - | 32565:5821-5840 | MS.gene066360:intergenic | 50.0% | |
| GCCATGGATGAAGAGGATGA+GGG | - | 32565:5795-5814 | MS.gene066360:intergenic | 50.0% | |
| GTGGTAGTAATTGAAGGGGC+AGG | + | 32565:7395-7414 | MS.gene066360:CDS | 50.0% | |
| TACACGAGCCTCCATATCGT+TGG | + | 32565:5938-5957 | MS.gene066360:CDS | 50.0% | |
| TATCAGTGTCTCCGTATCCG+CGG | - | 32565:5898-5917 | MS.gene066360:intergenic | 50.0% | |
| TCTTGCGCCAGGTGCATTAT+AGG | - | 32565:7324-7343 | MS.gene066360:intergenic | 50.0% | |
| TTGCCATGGTTACCGTTGTG+TGG | + | 32565:5862-5881 | MS.gene066360:CDS | 50.0% | |
| ! | TTGACTTGAGCACCAGTCCA+TGG | - | 32565:7263-7282 | MS.gene066360:intergenic | 50.0% |
| !! | GAAGAGAGATGTGCCACTTC+TGG | + | 32565:7367-7386 | MS.gene066360:CDS | 50.0% |
| ACCATAGGTCAGGGAAGCCA+TGG | - | 32565:5811-5830 | None:intergenic | 55.0% | |
| ACTGGGAGCTCAATGCTCCA+TGG | + | 32565:7243-7262 | MS.gene066360:CDS | 55.0% | |
| AGCCATGGGGGCAACACTAT+AGG | - | 32565:6791-6810 | MS.gene066360:intergenic | 55.0% | |
| CAGGGAAGCCATGGATGAAG+AGG | - | 32565:5802-5821 | MS.gene066360:intergenic | 55.0% | |
| CCCCTCATCCTCTTCATCCA+TGG | + | 32565:5791-5810 | MS.gene066360:CDS | 55.0% | |
| CTCCTATAGTGTTGCCCCCA+TGG | + | 32565:6786-6805 | MS.gene066360:CDS | 55.0% | |
| GAGCTCAATGCTCCATGGAC+TGG | + | 32565:7248-7267 | MS.gene066360:CDS | 55.0% | |
| GGACTTCTTGACGCCATTGC+TGG | + | 32565:5971-5990 | MS.gene066360:CDS | 55.0% | |
| GGTGGCGCCATGAATACCAT+AGG | - | 32565:5826-5845 | MS.gene066360:intergenic | 55.0% | |
| TCCATGGCTTCCCTGACCTA+TGG | + | 32565:5807-5826 | MS.gene066360:CDS | 55.0% | |
| TGGAGGCTCGTGTAGGATGT+CGG | - | 32565:5932-5951 | MS.gene066360:intergenic | 55.0% | |
| ! | ATTGGGGTGCCCTTACTGCT+TGG | + | 32565:6026-6045 | MS.gene066360:CDS | 55.0% |
| !! | CAGTAAGGGCACCCCAATCA+TGG | - | 32565:6024-6043 | MS.gene066360:intergenic | 55.0% |
| !! | GAGAGATGTGCCACTTCTGG+AGG | + | 32565:7370-7389 | MS.gene066360:CDS | 55.0% |
| !! | TGTGCCACTTCTGGAGGATG+TGG | + | 32565:7376-7395 | MS.gene066360:CDS | 55.0% |
| GCTCGTGTAGGATGTCGGTG+AGG | - | 32565:5927-5946 | MS.gene066360:intergenic | 60.0% | |
| GGGCCACACAACGGTAACCA+TGG | - | 32565:5868-5887 | MS.gene066360:intergenic | 60.0% | |
| GTGTAGGATGTCGGTGAGGC+TGG | - | 32565:5923-5942 | MS.gene066360:intergenic | 60.0% | |
| TCTCCGTATCCGCGGAGATC+CGG | - | 32565:5890-5909 | MS.gene066360:intergenic | 60.0% | |
| TGGTTACCGTTGTGTGGCCC+CGG | + | 32565:5868-5887 | MS.gene066360:CDS | 60.0% | |
| CTCCGTATCCGCGGAGATCC+GGG | - | 32565:5889-5908 | MS.gene066360:intergenic | 65.0% | |
| GGAGATCCGGGGCCACACAA+CGG | - | 32565:5877-5896 | MS.gene066360:intergenic | 65.0% | |
| TCCGTATCCGCGGAGATCCG+GGG | - | 32565:5888-5907 | MS.gene066360:intergenic | 65.0% | |
| GCCCCGGATCTCCGCGGATA+CGG | + | 32565:5884-5903 | MS.gene066360:CDS | 70.0% | |
| TGTGTGGCCCCGGATCTCCG+CGG | + | 32565:5878-5897 | MS.gene066360:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 32565 | gene | 5713 | 7487 | 5713 | ID=MS.gene066360 |
| 32565 | mRNA | 5713 | 7487 | 5713 | ID=MS.gene066360.t1;Parent=MS.gene066360 |
| 32565 | exon | 5713 | 6189 | 5713 | ID=MS.gene066360.t1.exon1;Parent=MS.gene066360.t1 |
| 32565 | CDS | 5713 | 6189 | 5713 | ID=cds.MS.gene066360.t1;Parent=MS.gene066360.t1 |
| 32565 | exon | 6656 | 6897 | 6656 | ID=MS.gene066360.t1.exon2;Parent=MS.gene066360.t1 |
| 32565 | CDS | 6656 | 6897 | 6656 | ID=cds.MS.gene066360.t1;Parent=MS.gene066360.t1 |
| 32565 | exon | 7241 | 7487 | 7241 | ID=MS.gene066360.t1.exon3;Parent=MS.gene066360.t1 |
| 32565 | CDS | 7241 | 7487 | 7241 | ID=cds.MS.gene066360.t1;Parent=MS.gene066360.t1 |
| Gene Sequence |
| Protein sequence |
