Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071500.t1 | KEH32298.1 | 96.6 | 321 | 11 | 0 | 1 | 321 | 35 | 355 | 5.50E-190 | 673.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071500.t1 | I6YGS0 | 36.2 | 320 | 182 | 7 | 9 | 317 | 7 | 315 | 4.9e-54 | 213.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071500.t1 | A0A072UTA2 | 96.6 | 321 | 11 | 0 | 1 | 321 | 35 | 355 | 4.0e-190 | 673.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071500.t1 | MTR_4g120240 | 96.573 | 321 | 11 | 0 | 1 | 321 | 35 | 355 | 0.0 | 649 |
| MS.gene071500.t1 | MTR_7g108825 | 61.129 | 319 | 122 | 1 | 3 | 321 | 1 | 317 | 3.17e-148 | 419 |
| MS.gene071500.t1 | MTR_7g112970 | 61.250 | 320 | 119 | 3 | 3 | 321 | 1 | 316 | 5.11e-148 | 419 |
| MS.gene071500.t1 | MTR_7g113020 | 61.994 | 321 | 118 | 3 | 3 | 321 | 1 | 319 | 2.17e-146 | 415 |
| MS.gene071500.t1 | MTR_7g112960 | 61.682 | 321 | 119 | 3 | 3 | 321 | 1 | 319 | 6.34e-146 | 414 |
| MS.gene071500.t1 | MTR_7g112963 | 61.371 | 321 | 120 | 3 | 3 | 321 | 1 | 319 | 1.35e-145 | 413 |
| MS.gene071500.t1 | MTR_7g113050 | 60.125 | 321 | 124 | 3 | 3 | 321 | 1 | 319 | 2.62e-144 | 409 |
| MS.gene071500.t1 | MTR_7g112615 | 60.436 | 321 | 123 | 3 | 3 | 321 | 1 | 319 | 5.10e-144 | 409 |
| MS.gene071500.t1 | MTR_7g113030 | 59.813 | 321 | 125 | 3 | 3 | 321 | 1 | 319 | 1.81e-143 | 407 |
| MS.gene071500.t1 | MTR_7g112620 | 59.190 | 321 | 127 | 3 | 3 | 321 | 1 | 319 | 5.58e-141 | 401 |
| MS.gene071500.t1 | MTR_4g005160 | 56.481 | 324 | 134 | 4 | 3 | 321 | 1 | 322 | 7.06e-133 | 380 |
| MS.gene071500.t1 | MTR_7g113010 | 61.131 | 283 | 106 | 3 | 3 | 283 | 1 | 281 | 8.94e-124 | 367 |
| MS.gene071500.t1 | MTR_7g113050 | 61.667 | 240 | 88 | 3 | 3 | 240 | 1 | 238 | 9.58e-106 | 308 |
| MS.gene071500.t1 | MTR_8g076680 | 47.352 | 321 | 165 | 3 | 1 | 321 | 1 | 317 | 3.57e-105 | 310 |
| MS.gene071500.t1 | MTR_7g112615 | 61.250 | 240 | 89 | 3 | 3 | 240 | 1 | 238 | 2.68e-104 | 305 |
| MS.gene071500.t1 | MTR_7g108825 | 59.244 | 238 | 95 | 1 | 3 | 240 | 1 | 236 | 2.56e-102 | 300 |
| MS.gene071500.t1 | MTR_8g076680 | 49.167 | 240 | 120 | 1 | 1 | 240 | 1 | 238 | 3.87e-81 | 246 |
| MS.gene071500.t1 | MTR_7g112615 | 63.529 | 170 | 58 | 3 | 3 | 170 | 1 | 168 | 7.80e-73 | 223 |
| MS.gene071500.t1 | MTR_1g083480 | 60.625 | 160 | 58 | 2 | 3 | 159 | 1 | 158 | 1.16e-67 | 209 |
| MS.gene071500.t1 | MTR_2g090245 | 36.025 | 322 | 190 | 9 | 3 | 320 | 1 | 310 | 4.21e-59 | 192 |
| MS.gene071500.t1 | MTR_2g090240 | 34.161 | 322 | 196 | 8 | 3 | 320 | 1 | 310 | 7.05e-59 | 192 |
| MS.gene071500.t1 | MTR_4g089060 | 34.675 | 323 | 192 | 9 | 3 | 320 | 1 | 309 | 3.56e-58 | 190 |
| MS.gene071500.t1 | MTR_4g089040 | 33.022 | 321 | 200 | 7 | 3 | 320 | 1 | 309 | 2.61e-56 | 185 |
| MS.gene071500.t1 | MTR_4g089060 | 32.286 | 350 | 191 | 10 | 3 | 320 | 1 | 336 | 4.78e-53 | 177 |
| MS.gene071500.t1 | MTR_7g112910 | 41.129 | 248 | 88 | 7 | 76 | 321 | 4 | 195 | 1.19e-50 | 167 |
| MS.gene071500.t1 | MTR_4g089060 | 35.745 | 235 | 138 | 6 | 3 | 233 | 1 | 226 | 2.24e-45 | 154 |
| MS.gene071500.t1 | MTR_3g024250 | 57.009 | 107 | 44 | 1 | 49 | 155 | 3 | 107 | 8.71e-36 | 126 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071500.t1 | AT4G02340 | 59.561 | 319 | 126 | 2 | 3 | 321 | 1 | 316 | 4.36e-149 | 422 |
| MS.gene071500.t1 | AT4G15960 | 58.951 | 324 | 128 | 1 | 3 | 321 | 51 | 374 | 6.67e-149 | 423 |
| MS.gene071500.t1 | AT3G05600 | 56.481 | 324 | 136 | 2 | 3 | 321 | 1 | 324 | 2.71e-140 | 400 |
| MS.gene071500.t1 | AT2G26740 | 57.632 | 321 | 131 | 3 | 6 | 321 | 1 | 321 | 9.38e-130 | 373 |
| MS.gene071500.t1 | AT2G26750 | 55.625 | 320 | 138 | 2 | 6 | 321 | 1 | 320 | 5.77e-127 | 365 |
| MS.gene071500.t1 | AT4G15955 | 54.321 | 324 | 114 | 4 | 7 | 321 | 6 | 304 | 9.80e-123 | 354 |
| MS.gene071500.t1 | AT3G05600 | 56.790 | 243 | 100 | 2 | 3 | 240 | 1 | 243 | 5.44e-100 | 294 |
| MS.gene071500.t1 | AT3G51000 | 45.938 | 320 | 166 | 5 | 5 | 321 | 4 | 319 | 8.64e-100 | 296 |
| MS.gene071500.t1 | AT4G15955 | 63.793 | 174 | 54 | 2 | 7 | 171 | 6 | 179 | 1.31e-79 | 240 |
| MS.gene071500.t1 | AT4G15955 | 63.636 | 165 | 51 | 2 | 7 | 162 | 6 | 170 | 3.84e-74 | 226 |
Find 0 sgRNAs with CRISPR-Local
Find 150 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CTAAATAGTTTTGAATTTTT+TGG | + | 32559:11671-11690 | MS.gene071500:intron | 15.0% |
| !!! | TTTTTTTACAGTAAAATCTA+TGG | + | 32559:12356-12375 | MS.gene071500:intron | 15.0% |
| !! | AACAATCAAATTTATCTCAT+TGG | - | 32559:12506-12525 | None:intergenic | 20.0% |
| !! | ATTTGATCAAGTAAATACTA+AGG | - | 32559:11650-11669 | None:intergenic | 20.0% |
| !! | TAATGAGTTAGTAAGAAATA+TGG | + | 32559:12454-12473 | MS.gene071500:intron | 20.0% |
| !! | TTTGATCAAGTAAATACTAA+GGG | - | 32559:11649-11668 | None:intergenic | 20.0% |
| !!! | AATTTTTTAATTGAGCAAAC+CGG | + | 32559:11830-11849 | MS.gene071500:intron | 20.0% |
| !!! | TTTACTTTGAAAATCATGAT+CGG | + | 32559:11889-11908 | MS.gene071500:intron | 20.0% |
| ! | AATATACACATAGCTGAAAA+GGG | + | 32559:11141-11160 | MS.gene071500:CDS | 25.0% |
| ! | ATGTACAAACCTTAAATCTA+AGG | - | 32559:11609-11628 | None:intergenic | 25.0% |
| ! | TGTACAAACCTTAAATCTAA+GGG | - | 32559:11608-11627 | None:intergenic | 25.0% |
| ! | TTTACAGTAAAATCTATGGA+GGG | + | 32559:12360-12379 | MS.gene071500:intron | 25.0% |
| !! | CAAAGATATATTGTTCTAAG+TGG | + | 32559:11988-12007 | MS.gene071500:intron | 25.0% |
| !! | TTTTACAGTAAAATCTATGG+AGG | + | 32559:12359-12378 | MS.gene071500:intron | 25.0% |
| !!! | TTTTTTCAGATGTCTACTTT+CGG | - | 32559:11803-11822 | None:intergenic | 25.0% |
| AACACTATAGGAGAATCATT+TGG | - | 32559:12161-12180 | None:intergenic | 30.0% | |
| AATAAAGGATACCTGAAATC+TGG | - | 32559:11562-11581 | None:intergenic | 30.0% | |
| ATTACCATAAACTGCTCTAA+GGG | - | 32559:11526-11545 | None:intergenic | 30.0% | |
| CAATATACACATAGCTGAAA+AGG | + | 32559:11140-11159 | MS.gene071500:CDS | 30.0% | |
| GTAAGTTTATCTTCAACTCT+AGG | + | 32559:12280-12299 | MS.gene071500:intron | 30.0% | |
| TCTGTCAATTGCAATATTAC+AGG | + | 32559:12016-12035 | MS.gene071500:intron | 30.0% | |
| TGTCTCTATCAATGTTTCAT+AGG | + | 32559:12546-12565 | MS.gene071500:intron | 30.0% | |
| ! | ATTCTTGTTGTAATAGCCAT+GGG | - | 32559:12187-12206 | None:intergenic | 30.0% |
| AGAGATTACATTCACAAAGG+TGG | + | 32559:12723-12742 | MS.gene071500:CDS | 35.0% | |
| AGGATGTGGTAGTAATTGAA+GGG | + | 32559:12772-12791 | MS.gene071500:CDS | 35.0% | |
| AGTTCCAGTGAAGTTTATAG+TGG | + | 32559:12665-12684 | MS.gene071500:CDS | 35.0% | |
| ATCTAAGGGAGCTTATCTAT+AGG | - | 32559:11594-11613 | None:intergenic | 35.0% | |
| CAAATGCAAGAGAAGCAATA+TGG | - | 32559:12600-12619 | None:intergenic | 35.0% | |
| CATTACCATAAACTGCTCTA+AGG | - | 32559:11527-11546 | None:intergenic | 35.0% | |
| CTACTATATCTCCAGATTTC+AGG | + | 32559:11548-11567 | MS.gene071500:CDS | 35.0% | |
| CTCTTGCATTTGTAGAAACT+GGG | + | 32559:12608-12627 | MS.gene071500:intron | 35.0% | |
| CTTTATCTACCTAAGGGTAA+AGG | + | 32559:12125-12144 | MS.gene071500:CDS | 35.0% | |
| GAGATTACATTCACAAAGGT+GGG | + | 32559:12724-12743 | MS.gene071500:CDS | 35.0% | |
| GATAAGCTCCCTTAGATTTA+AGG | + | 32559:11597-11616 | MS.gene071500:intron | 35.0% | |
| GATAAGTCAGAAATTCCTTC+AGG | - | 32559:12091-12110 | None:intergenic | 35.0% | |
| GCAAGAGATTACATTCACAA+AGG | + | 32559:12720-12739 | MS.gene071500:CDS | 35.0% | |
| GTGTATATTGATGCCATTGA+CGG | - | 32559:11130-11149 | None:intergenic | 35.0% | |
| GTTCCAGTGAAGTTTATAGT+GGG | + | 32559:12666-12685 | MS.gene071500:CDS | 35.0% | |
| TCTAAGGGAGCTTATCTATA+GGG | - | 32559:11593-11612 | None:intergenic | 35.0% | |
| TCTCTTGCATTTGTAGAAAC+TGG | + | 32559:12607-12626 | MS.gene071500:intron | 35.0% | |
| TTACCCTTAGGTAGATAAAG+TGG | - | 32559:12125-12144 | None:intergenic | 35.0% | |
| ! | CATTCTTGTTGTAATAGCCA+TGG | - | 32559:12188-12207 | None:intergenic | 35.0% |
| ! | GTATCAAGAGGCTTTCTTTT+GGG | - | 32559:11504-11523 | None:intergenic | 35.0% |
| ! | TATCAAGAGGCTTTCTTTTG+GGG | - | 32559:11503-11522 | None:intergenic | 35.0% |
| ! | TCCAGTCTTGTCAAATTTAG+AGG | - | 32559:12222-12241 | None:intergenic | 35.0% |
| ! | TGATCGGAATTTTCGAAATG+TGG | + | 32559:11905-11924 | MS.gene071500:intron | 35.0% |
| ! | TTCTTGTTGTAATAGCCATG+GGG | - | 32559:12186-12205 | None:intergenic | 35.0% |
| !! | CATATCGTTGGTGATATCAT+CGG | + | 32559:11330-11349 | MS.gene071500:CDS | 35.0% |
| !!! | GTGGATTGGTGTAGTTATTT+TGG | + | 32559:11961-11980 | MS.gene071500:intron | 35.0% |
| AACTCTGCTTCTATATCACC+AGG | - | 32559:12044-12063 | None:intergenic | 40.0% | |
| AAGCTAGATATGTGATCTGG+TGG | - | 32559:11224-11243 | None:intergenic | 40.0% | |
| ACAAGAGCCTTGATTCTTTC+AGG | - | 32559:11450-11469 | None:intergenic | 40.0% | |
| AGCTTATCTATAGGGACTGA+GGG | - | 32559:11585-11604 | None:intergenic | 40.0% | |
| ATTGCAATATTACAGGAGCC+TGG | + | 32559:12023-12042 | MS.gene071500:intron | 40.0% | |
| CAAGAGCCTTGATTCTTTCA+GGG | - | 32559:11449-11468 | None:intergenic | 40.0% | |
| CAATCCACAAAAACTCAGCA+TGG | - | 32559:11949-11968 | None:intergenic | 40.0% | |
| CATGTTTGATCAGTAAGTGC+CGG | - | 32559:11852-11871 | None:intergenic | 40.0% | |
| CGATGATATCACCAACGATA+TGG | - | 32559:11332-11351 | None:intergenic | 40.0% | |
| GAGGATGTGGTAGTAATTGA+AGG | + | 32559:12771-12790 | MS.gene071500:CDS | 40.0% | |
| GATACCCTTAGAGCAGTTTA+TGG | + | 32559:11519-11538 | MS.gene071500:CDS | 40.0% | |
| GCACTTCATCCATCAAGAAA+GGG | + | 32559:12800-12819 | MS.gene071500:CDS | 40.0% | |
| GCCTCTAAATTTGACAAGAC+TGG | + | 32559:12218-12237 | MS.gene071500:CDS | 40.0% | |
| GGAAAGATACCAAGCAGTAA+GGG | - | 32559:11418-11437 | None:intergenic | 40.0% | |
| GGATGTGGTAGTAATTGAAG+GGG | + | 32559:12773-12792 | MS.gene071500:CDS | 40.0% | |
| GGTCCACTTTATCTACCTAA+GGG | + | 32559:12119-12138 | MS.gene071500:CDS | 40.0% | |
| TAGGTAGATAAAGTGGACCA+GGG | - | 32559:12118-12137 | None:intergenic | 40.0% | |
| TATAGGGACTGAGGGAATAA+AGG | - | 32559:11577-11596 | None:intergenic | 40.0% | |
| TCACCCACTATAAACTTCAC+TGG | - | 32559:12672-12691 | None:intergenic | 40.0% | |
| TCTTATCAGCCCTTTCTTGA+TGG | - | 32559:12812-12831 | None:intergenic | 40.0% | |
| TGATATCACCAACGATATGG+AGG | - | 32559:11329-11348 | None:intergenic | 40.0% | |
| TGCCATTGACGGTTACAATT+CGG | - | 32559:11119-11138 | None:intergenic | 40.0% | |
| TGGTCCACTTTATCTACCTA+AGG | + | 32559:12118-12137 | MS.gene071500:CDS | 40.0% | |
| TGTCCAAAACCTTTACCCTT+AGG | - | 32559:12137-12156 | None:intergenic | 40.0% | |
| TTAGGTAGATAAAGTGGACC+AGG | - | 32559:12119-12138 | None:intergenic | 40.0% | |
| TTGACAAGACTGGATTCACA+GGG | + | 32559:12228-12247 | MS.gene071500:CDS | 40.0% | |
| TTTGACAAGACTGGATTCAC+AGG | + | 32559:12227-12246 | MS.gene071500:CDS | 40.0% | |
| ! | ATCACATATCTAGCTTGCCA+TGG | + | 32559:11228-11247 | MS.gene071500:CDS | 40.0% |
| ! | CAATCCATGCTGAGTTTTTG+TGG | + | 32559:11942-11961 | MS.gene071500:intron | 40.0% |
| ! | CATGCTGAGTTTTTGTGGAT+TGG | + | 32559:11947-11966 | MS.gene071500:intron | 40.0% |
| ! | CTACCTAAGGGTAAAGGTTT+TGG | + | 32559:12131-12150 | MS.gene071500:CDS | 40.0% |
| ! | GGAATTTTCGAAATGTGGAG+TGG | + | 32559:11910-11929 | MS.gene071500:intron | 40.0% |
| ! | GGTATCAAGAGGCTTTCTTT+TGG | - | 32559:11505-11524 | None:intergenic | 40.0% |
| ! | TCTTGTTGTAATAGCCATGG+GGG | - | 32559:12185-12204 | None:intergenic | 40.0% |
| !! | CAAGAGAAGGTGTTTGTTGT+GGG | + | 32559:11378-11397 | MS.gene071500:CDS | 40.0% |
| !! | TCAAGAGAAGGTGTTTGTTG+TGG | + | 32559:11377-11396 | MS.gene071500:CDS | 40.0% |
| CACATAGCTGAAAAGGGTCA+AGG | + | 32559:11147-11166 | MS.gene071500:CDS | 45.0% | |
| CACCGAATTGTAACCGTCAA+TGG | + | 32559:11114-11133 | MS.gene071500:CDS | 45.0% | |
| CATTGCTGGTGATCAAGAGA+AGG | + | 32559:11365-11384 | MS.gene071500:CDS | 45.0% | |
| CGGCACTTACTGATCAAACA+TGG | + | 32559:11850-11869 | MS.gene071500:intron | 45.0% | |
| CTATCGCCCTGAAAGAATCA+AGG | + | 32559:11440-11459 | MS.gene071500:CDS | 45.0% | |
| CTTCTCTTGATCACCAGCAA+TGG | - | 32559:11367-11386 | None:intergenic | 45.0% | |
| GACCTTACCTATAATGCACC+TGG | + | 32559:12696-12715 | MS.gene071500:CDS | 45.0% | |
| GAGCTTATCTATAGGGACTG+AGG | - | 32559:11586-11605 | None:intergenic | 45.0% | |
| GATTCTTTCAGGGCGATAGA+GGG | - | 32559:11439-11458 | None:intergenic | 45.0% | |
| GCCATGAATACCATAGGTCA+GGG | - | 32559:11200-11219 | None:intergenic | 45.0% | |
| GGCAAGCTAGATATGTGATC+TGG | - | 32559:11227-11246 | None:intergenic | 45.0% | |
| GGCACTTCATCCATCAAGAA+AGG | + | 32559:12799-12818 | MS.gene071500:CDS | 45.0% | |
| GGGAAAGATACCAAGCAGTA+AGG | - | 32559:11419-11438 | None:intergenic | 45.0% | |
| TCCCTGACCTATGGTATTCA+TGG | + | 32559:11196-11215 | MS.gene071500:CDS | 45.0% | |
| TGAATGTAATCTCTTGCGCC+AGG | - | 32559:12717-12736 | None:intergenic | 45.0% | |
| TGACAAGACTGGATTCACAG+GGG | + | 32559:12229-12248 | MS.gene071500:CDS | 45.0% | |
| TGATTCTTTCAGGGCGATAG+AGG | - | 32559:11440-11459 | None:intergenic | 45.0% | |
| TGGAACTGAAAGAGTCCTGA+AGG | + | 32559:12073-12092 | MS.gene071500:CDS | 45.0% | |
| TGGTAGTAATTGAAGGGGCA+GGG | + | 32559:12778-12797 | MS.gene071500:CDS | 45.0% | |
| TTTCTGACTTATCGCAACCC+TGG | + | 32559:12098-12117 | MS.gene071500:CDS | 45.0% | |
| ! | TTTGTTGTGGGCCATGATTG+GGG | + | 32559:11390-11409 | MS.gene071500:CDS | 45.0% |
| !! | ACTGCTCTAAGGGTATCAAG+AGG | - | 32559:11516-11535 | None:intergenic | 45.0% |
| !! | GAAGCAGAGTTTGCTGAGAT+TGG | + | 32559:12053-12072 | MS.gene071500:CDS | 45.0% |
| !! | GTTTGTTGTGGGCCATGATT+GGG | + | 32559:11389-11408 | MS.gene071500:CDS | 45.0% |
| !! | TGTTTGTTGTGGGCCATGAT+TGG | + | 32559:11388-11407 | MS.gene071500:CDS | 45.0% |
| !!! | GGCTTTCTTTTGGGGTTTCT+AGG | - | 32559:11495-11514 | None:intergenic | 45.0% |
| AACGATATGGAGGCTCGTGT+AGG | - | 32559:11319-11338 | None:intergenic | 50.0% | |
| ACTACCACATCCTCCAGAAG+TGG | - | 32559:12765-12784 | None:intergenic | 50.0% | |
| AGCCATGGATGAAGAGGATG+AGG | - | 32559:11176-11195 | None:intergenic | 50.0% | |
| CCATGGATGAAGAGGATGAG+GGG | - | 32559:11174-11193 | None:intergenic | 50.0% | |
| CGCCAGGTGCATTATAGGTA+AGG | - | 32559:12701-12720 | None:intergenic | 50.0% | |
| CGCCATGAATACCATAGGTC+AGG | - | 32559:11201-11220 | None:intergenic | 50.0% | |
| GCCATGGATGAAGAGGATGA+GGG | - | 32559:11175-11194 | None:intergenic | 50.0% | |
| GTGGTAGTAATTGAAGGGGC+AGG | + | 32559:12777-12796 | MS.gene071500:CDS | 50.0% | |
| TACACGAGCCTCCATATCGT+TGG | + | 32559:11318-11337 | MS.gene071500:CDS | 50.0% | |
| TATCAGTGTCTCCGTATCCG+CGG | - | 32559:11278-11297 | None:intergenic | 50.0% | |
| TCTTGCGCCAGGTGCATTAT+AGG | - | 32559:12706-12725 | None:intergenic | 50.0% | |
| TTGCCATGGTTACCGTTGTG+TGG | + | 32559:11242-11261 | MS.gene071500:CDS | 50.0% | |
| ! | TTGACTTGAGCACCAGTCCA+TGG | - | 32559:12645-12664 | None:intergenic | 50.0% |
| !! | GAAGAGAGATGTGCCACTTC+TGG | + | 32559:12749-12768 | MS.gene071500:CDS | 50.0% |
| ACCATAGGTCAGGGAAGCCA+TGG | - | 32559:11191-11210 | None:intergenic | 55.0% | |
| ACTGGGAGCTCAATGCTCCA+TGG | + | 32559:12625-12644 | MS.gene071500:CDS | 55.0% | |
| AGCCATGGGGGCAACACTAT+AGG | - | 32559:12173-12192 | None:intergenic | 55.0% | |
| CAGGGAAGCCATGGATGAAG+AGG | - | 32559:11182-11201 | None:intergenic | 55.0% | |
| CCCCTCATCCTCTTCATCCA+TGG | + | 32559:11171-11190 | MS.gene071500:CDS | 55.0% | |
| CTCCTATAGTGTTGCCCCCA+TGG | + | 32559:12168-12187 | MS.gene071500:CDS | 55.0% | |
| GAGCTCAATGCTCCATGGAC+TGG | + | 32559:12630-12649 | MS.gene071500:CDS | 55.0% | |
| GGACTTCTTGACGCCATTGC+TGG | + | 32559:11351-11370 | MS.gene071500:CDS | 55.0% | |
| GGTGGCGCCATGAATACCAT+AGG | - | 32559:11206-11225 | None:intergenic | 55.0% | |
| TCCATGGCTTCCCTGACCTA+TGG | + | 32559:11187-11206 | MS.gene071500:CDS | 55.0% | |
| TGGAGGCTCGTGTAGGATGT+CGG | - | 32559:11312-11331 | None:intergenic | 55.0% | |
| ! | ATTGGGGTGCCCTTACTGCT+TGG | + | 32559:11406-11425 | MS.gene071500:CDS | 55.0% |
| !! | CAGTAAGGGCACCCCAATCA+TGG | - | 32559:11404-11423 | None:intergenic | 55.0% |
| !! | GAGAGATGTGCCACTTCTGG+AGG | + | 32559:12752-12771 | MS.gene071500:CDS | 55.0% |
| !! | TGTGCCACTTCTGGAGGATG+TGG | + | 32559:12758-12777 | MS.gene071500:CDS | 55.0% |
| GCTCGTGTAGGATGTCGGTG+AGG | - | 32559:11307-11326 | None:intergenic | 60.0% | |
| GGGCCACACAACGGTAACCA+TGG | - | 32559:11248-11267 | None:intergenic | 60.0% | |
| GTGTAGGATGTCGGTGAGGC+TGG | - | 32559:11303-11322 | None:intergenic | 60.0% | |
| TCTCCGTATCCGCGGAGATC+CGG | - | 32559:11270-11289 | None:intergenic | 60.0% | |
| TGGTTACCGTTGTGTGGCCC+CGG | + | 32559:11248-11267 | MS.gene071500:CDS | 60.0% | |
| CTCCGTATCCGCGGAGATCC+GGG | - | 32559:11269-11288 | None:intergenic | 65.0% | |
| GGAGATCCGGGGCCACACAA+CGG | - | 32559:11257-11276 | None:intergenic | 65.0% | |
| TCCGTATCCGCGGAGATCCG+GGG | - | 32559:11268-11287 | None:intergenic | 65.0% | |
| GCCCCGGATCTCCGCGGATA+CGG | + | 32559:11264-11283 | MS.gene071500:CDS | 70.0% | |
| TGTGTGGCCCCGGATCTCCG+CGG | + | 32559:11258-11277 | MS.gene071500:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 32559 | gene | 11093 | 12869 | 11093 | ID=MS.gene071500 |
| 32559 | mRNA | 11093 | 12869 | 11093 | ID=MS.gene071500.t1;Parent=MS.gene071500 |
| 32559 | exon | 11093 | 11569 | 11093 | ID=MS.gene071500.t1.exon1;Parent=MS.gene071500.t1 |
| 32559 | CDS | 11093 | 11569 | 11093 | ID=cds.MS.gene071500.t1;Parent=MS.gene071500.t1 |
| 32559 | exon | 12038 | 12279 | 12038 | ID=MS.gene071500.t1.exon2;Parent=MS.gene071500.t1 |
| 32559 | CDS | 12038 | 12279 | 12038 | ID=cds.MS.gene071500.t1;Parent=MS.gene071500.t1 |
| 32559 | exon | 12623 | 12869 | 12623 | ID=MS.gene071500.t1.exon3;Parent=MS.gene071500.t1 |
| 32559 | CDS | 12623 | 12869 | 12623 | ID=cds.MS.gene071500.t1;Parent=MS.gene071500.t1 |
| Gene Sequence |
| Protein sequence |
