Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073529.t1 | XP_003604901.1 | 98.9 | 476 | 5 | 0 | 1 | 476 | 1 | 476 | 3.80E-272 | 946.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073529.t1 | Q7X9A0 | 80.8 | 479 | 86 | 5 | 1 | 476 | 1 | 476 | 3.7e-223 | 775.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073529.t1 | G7JTD2 | 98.9 | 476 | 5 | 0 | 1 | 476 | 1 | 476 | 2.8e-272 | 946.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049285 | MS.gene073529 | 0.820178 | 7.87E-53 | -1.69E-46 |
| MS.gene049320 | MS.gene073529 | 0.81762 | 3.00E-52 | -1.69E-46 |
| MS.gene049609 | MS.gene073529 | 0.809137 | 2.20E-50 | -1.69E-46 |
| MS.gene050163 | MS.gene073529 | 0.803073 | 4.15E-49 | -1.69E-46 |
| MS.gene050612 | MS.gene073529 | 0.808275 | 3.35E-50 | -1.69E-46 |
| MS.gene050772 | MS.gene073529 | 0.835096 | 2.05E-56 | -1.69E-46 |
| MS.gene051810 | MS.gene073529 | 0.839035 | 2.02E-57 | -1.69E-46 |
| MS.gene052271 | MS.gene073529 | 0.802241 | 6.16E-49 | -1.69E-46 |
| MS.gene052916 | MS.gene073529 | 0.814769 | 1.30E-51 | -1.69E-46 |
| MS.gene053213 | MS.gene073529 | 0.834595 | 2.74E-56 | -1.69E-46 |
| MS.gene053286 | MS.gene073529 | 0.834538 | 2.83E-56 | -1.69E-46 |
| MS.gene053574 | MS.gene073529 | 0.8072 | 5.68E-50 | -1.69E-46 |
| MS.gene054600 | MS.gene073529 | 0.806429 | 8.26E-50 | -1.69E-46 |
| MS.gene054642 | MS.gene073529 | 0.830273 | 3.22E-55 | -1.69E-46 |
| MS.gene055362 | MS.gene073529 | 0.808808 | 2.58E-50 | -1.69E-46 |
| MS.gene055722 | MS.gene073529 | 0.802684 | 4.99E-49 | -1.69E-46 |
| MS.gene056374 | MS.gene073529 | 0.806621 | 7.53E-50 | -1.69E-46 |
| MS.gene056657 | MS.gene073529 | 0.823527 | 1.32E-53 | -1.69E-46 |
| MS.gene056692 | MS.gene073529 | 0.802137 | 6.47E-49 | -1.69E-46 |
| MS.gene057331 | MS.gene073529 | 0.815242 | 1.02E-51 | -1.69E-46 |
| MS.gene057775 | MS.gene073529 | 0.836218 | 1.06E-56 | -1.69E-46 |
| MS.gene058323 | MS.gene073529 | 0.8007 | 1.27E-48 | -1.69E-46 |
| MS.gene058419 | MS.gene073529 | 0.808288 | 3.33E-50 | -1.69E-46 |
| MS.gene058723 | MS.gene073529 | 0.817991 | 2.47E-52 | -1.69E-46 |
| MS.gene059022 | MS.gene073529 | 0.803825 | 2.90E-49 | -1.69E-46 |
| MS.gene059029 | MS.gene073529 | 0.819914 | 9.04E-53 | -1.69E-46 |
| MS.gene059677 | MS.gene073529 | 0.813574 | 2.39E-51 | -1.69E-46 |
| MS.gene060703 | MS.gene073529 | 0.806097 | 9.71E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073529.t1 | MTR_4g021210 | 98.950 | 476 | 5 | 0 | 1 | 476 | 1 | 476 | 0.0 | 978 |
| MS.gene073529.t1 | MTR_5g080450 | 81.513 | 476 | 87 | 1 | 1 | 476 | 1 | 475 | 0.0 | 825 |
| MS.gene073529.t1 | MTR_3g068030 | 82.192 | 438 | 75 | 3 | 1 | 437 | 1 | 436 | 0.0 | 748 |
| MS.gene073529.t1 | MTR_3g068030 | 83.452 | 423 | 68 | 2 | 16 | 437 | 1 | 422 | 0.0 | 738 |
| MS.gene073529.t1 | MTR_2g105480 | 54.110 | 292 | 127 | 6 | 134 | 419 | 123 | 413 | 2.62e-109 | 330 |
| MS.gene073529.t1 | MTR_2g105480 | 60.262 | 229 | 87 | 4 | 134 | 359 | 123 | 350 | 3.71e-97 | 297 |
| MS.gene073529.t1 | MTR_2g105480 | 65.730 | 178 | 57 | 4 | 134 | 308 | 123 | 299 | 8.00e-77 | 243 |
| MS.gene073529.t1 | MTR_0373s0020 | 100.000 | 28 | 0 | 0 | 439 | 466 | 11 | 38 | 2.98e-13 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073529.t1 | AT2G39730 | 78.826 | 477 | 97 | 2 | 1 | 476 | 1 | 474 | 0.0 | 784 |
| MS.gene073529.t1 | AT2G39730 | 78.076 | 447 | 94 | 2 | 1 | 446 | 1 | 444 | 0.0 | 726 |
| MS.gene073529.t1 | AT2G39730 | 78.912 | 441 | 89 | 2 | 1 | 440 | 1 | 438 | 0.0 | 724 |
| MS.gene073529.t1 | AT1G73110 | 51.724 | 319 | 145 | 7 | 107 | 419 | 15 | 330 | 1.25e-110 | 331 |
| MS.gene073529.t1 | AT1G73110 | 52.564 | 312 | 139 | 7 | 114 | 419 | 119 | 427 | 2.59e-109 | 331 |
Find 120 sgRNAs with CRISPR-Local
Find 219 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTATATTGCACCTGCATTTA+TGG | 0.088800 | 4.1:+76937105 | MS.gene073529:CDS |
| TATTAAGATTCCTCTCATTT+TGG | 0.116167 | 4.1:+76937174 | MS.gene073529:CDS |
| GAGTTTGTCTGGTAACTTTA+AGG | 0.180254 | 4.1:+76936330 | MS.gene073529:CDS |
| TCTTCACATTCTCTTGTTCT+TGG | 0.192672 | 4.1:-76938476 | None:intergenic |
| ATGAGAGGAATCTTAATATT+TGG | 0.205578 | 4.1:-76937169 | None:intergenic |
| TCTCCGGCACTCATCATTAT+AGG | 0.240969 | 4.1:-76937436 | None:intergenic |
| TTCTACCTGTGCCATGTTAA+TGG | 0.253796 | 4.1:-76935587 | None:intergenic |
| GTCTGGTAACTTTAAGGTTT+CGG | 0.299605 | 4.1:+76936336 | MS.gene073529:CDS |
| TGATATGTTCAGGTACAATA+TGG | 0.328301 | 4.1:+76937063 | MS.gene073529:intron |
| AAGGGTCAGCGCAACCTTCT+TGG | 0.331258 | 4.1:-76938753 | None:intergenic |
| CTTTGCCTAATCAACTTTGC+AGG | 0.332302 | 4.1:-76937484 | None:intergenic |
| AGCTTGTCAATAGTCATCTT+TGG | 0.340251 | 4.1:-76938429 | None:intergenic |
| TCTTTGCCAAGATGGGAATA+AGG | 0.350452 | 4.1:+76937245 | MS.gene073529:CDS |
| GCAACTTCCATCGTCACTTC+TGG | 0.351528 | 4.1:-76938800 | None:intergenic |
| AATGATGAGTGCCGGAGAAT+TGG | 0.354739 | 4.1:+76937441 | MS.gene073529:CDS |
| ATACGTCCATCACGAATTAA+AGG | 0.360045 | 4.1:-76937757 | None:intergenic |
| ATCAAGACTGGAAACTTCTA+TGG | 0.360535 | 4.1:+76938561 | MS.gene073529:CDS |
| TCCAGCCCATCTGTCCTTTG+AGG | 0.369839 | 4.1:-76936389 | None:intergenic |
| CTCTTCTTTGTTGTACATAC+CGG | 0.377301 | 4.1:-76937680 | None:intergenic |
| GGGCGCCTACTCGTGATGAT+AGG | 0.379460 | 4.1:+76937794 | MS.gene073529:CDS |
| TCGCAGAACTAGCTTTCTTA+AGG | 0.379560 | 4.1:-76936294 | None:intergenic |
| CTCCGGCACTCATCATTATA+GGG | 0.391535 | 4.1:-76937435 | None:intergenic |
| AGTTACCAGACAAACTCTTC+TGG | 0.399477 | 4.1:-76936324 | None:intergenic |
| TCATTTCCAGTGACGATGAT+AGG | 0.406761 | 4.1:-76937715 | None:intergenic |
| CCTACCAATGTTCAACTTCC+CGG | 0.413313 | 4.1:+76937661 | MS.gene073529:CDS |
| AAGATTGTCGACACATTCCC+TGG | 0.416886 | 4.1:+76937874 | MS.gene073529:CDS |
| ATCTTTGGTTGCTCAAAAGT+TGG | 0.417648 | 4.1:-76938414 | None:intergenic |
| GCAACTTCTGTGACAATTGT+TGG | 0.420971 | 4.1:+76935562 | MS.gene073529:CDS |
| TGAGGGTTGCATTTACCATC+TGG | 0.421559 | 4.1:-76937621 | None:intergenic |
| TTTCAAGCTCCAACGGATGC+TGG | 0.424875 | 4.1:+76936478 | MS.gene073529:CDS |
| GAGAGCCTGCAAAGTTGATT+AGG | 0.432564 | 4.1:+76937479 | MS.gene073529:CDS |
| GAAGTCAGGAATTGGATATC+TGG | 0.433568 | 4.1:+76938339 | MS.gene073529:CDS |
| ATGACGATGAAGTCAGGAAT+TGG | 0.439434 | 4.1:+76938331 | MS.gene073529:CDS |
| TCCAGCCAGAAGAGTTTGTC+TGG | 0.441643 | 4.1:+76936319 | MS.gene073529:CDS |
| AATATGGACAACACAATAGA+TGG | 0.441782 | 4.1:+76937079 | MS.gene073529:CDS |
| ATCTTGACAATGTCATCCTT+AGG | 0.455344 | 4.1:-76937856 | None:intergenic |
| GGCTTACCAATTGACTGTCC+AGG | 0.457458 | 4.1:-76937892 | None:intergenic |
| TTCCCCTTGTGATATCCTGT+TGG | 0.457655 | 4.1:-76936435 | None:intergenic |
| TACCTCAGTCAGGCAGCTCT+TGG | 0.463568 | 4.1:+76938519 | MS.gene073529:CDS |
| ATTTCCACTTTCCAATTCTC+CGG | 0.468242 | 4.1:-76937452 | None:intergenic |
| ACATTCCCTGGACAGTCAAT+TGG | 0.470564 | 4.1:+76937886 | MS.gene073529:CDS |
| CAGGATATCACAAGGGGAAA+GGG | 0.479596 | 4.1:+76936439 | MS.gene073529:CDS |
| ACCTCAAAGGACAGATGGGC+TGG | 0.482103 | 4.1:+76936388 | MS.gene073529:CDS |
| TTGGGCATTTGGGGAGGCAA+AGG | 0.485012 | 4.1:+76937193 | MS.gene073529:CDS |
| GAGTGTATGACGATGAAGTC+AGG | 0.487351 | 4.1:+76938325 | MS.gene073529:CDS |
| CAACCTTCTTGGACAGGTAA+AGG | 0.489973 | 4.1:-76938742 | None:intergenic |
| GCGTCCGACATTATCAGAAA+AGG | 0.491800 | 4.1:+76937517 | MS.gene073529:CDS |
| TTCATCAATGATCTTGATGC+AGG | 0.493471 | 4.1:+76937556 | MS.gene073529:CDS |
| TGACACCTCAGATGACCAAC+AGG | 0.496044 | 4.1:+76936420 | MS.gene073529:CDS |
| CCGGGAAGTTGAACATTGGT+AGG | 0.497705 | 4.1:-76937661 | None:intergenic |
| TTTGGTTGCTCAAAAGTTGG+AGG | 0.500397 | 4.1:-76938411 | None:intergenic |
| ATTGACAAGCTACTAGAATA+CGG | 0.510760 | 4.1:+76938441 | MS.gene073529:CDS |
| GGCGCCTACTCGTGATGATA+GGG | 0.511511 | 4.1:+76937795 | MS.gene073529:CDS |
| AGCAGACCTCAAAGGACAGA+TGG | 0.514834 | 4.1:+76936383 | MS.gene073529:CDS |
| CGTGTTCCTATCATCGTCAC+TGG | 0.515049 | 4.1:+76937709 | MS.gene073529:CDS |
| TCCTATGATTATATCAGTAC+CGG | 0.515211 | 4.1:+76936523 | MS.gene073529:CDS |
| TCTTGACAATGTCATCCTTA+GGG | 0.521614 | 4.1:-76937855 | None:intergenic |
| CAGGACAGATGGTGTCCCTA+AGG | 0.522125 | 4.1:+76937840 | MS.gene073529:CDS |
| AGGAATTGGATATCTGGTAT+TGG | 0.523666 | 4.1:+76938345 | MS.gene073529:CDS |
| TTTAATTCGTGATGGACGTA+TGG | 0.525860 | 4.1:+76937759 | MS.gene073529:CDS |
| AATGACGATGCTATCAAGAC+TGG | 0.527194 | 4.1:+76938549 | MS.gene073529:CDS |
| ACAGGATATCACAAGGGGAA+AGG | 0.531778 | 4.1:+76936438 | MS.gene073529:CDS |
| GTTCCTTTACCTGTCCAAGA+AGG | 0.532646 | 4.1:+76938739 | MS.gene073529:CDS |
| ACCGGTACTGATATAATCAT+AGG | 0.533522 | 4.1:-76936524 | None:intergenic |
| GAATTGGAAAGTGGAAATGC+AGG | 0.534950 | 4.1:+76937457 | MS.gene073529:CDS |
| AAGACTTGTGAATTCAAAAG+AGG | 0.535398 | 4.1:+76938386 | MS.gene073529:CDS |
| TGATAATGTCGGACGCCTCA+CGG | 0.537380 | 4.1:-76937510 | None:intergenic |
| AATGATCTTGATGCAGGAGC+TGG | 0.538362 | 4.1:+76937562 | MS.gene073529:CDS |
| AGCTGACAAATACCTCAGTC+AGG | 0.538759 | 4.1:+76938509 | MS.gene073529:CDS |
| TATCACAAGGGGAAAGGGAA+AGG | 0.540011 | 4.1:+76936444 | MS.gene073529:CDS |
| TGAGCTTGTCTTTGCCAAGA+TGG | 0.545502 | 4.1:+76937237 | MS.gene073529:CDS |
| GATGCAGGAGCTGGTAGAAT+GGG | 0.546512 | 4.1:+76937571 | MS.gene073529:CDS |
| TCAGCGCAACCTTCTTGGAC+AGG | 0.548212 | 4.1:-76938748 | None:intergenic |
| TATGCTCCTTTAATTCGTGA+TGG | 0.548955 | 4.1:+76937751 | MS.gene073529:CDS |
| GGTATTGGTGTGGAGAGTAT+TGG | 0.554129 | 4.1:+76938360 | MS.gene073529:CDS |
| GCTTACCAATTGACTGTCCA+GGG | 0.556345 | 4.1:-76937891 | None:intergenic |
| ACCAGACAAACTCTTCTGGC+TGG | 0.558437 | 4.1:-76936320 | None:intergenic |
| CCATCGTCACTTCTGGCTGT+CGG | 0.561082 | 4.1:-76938793 | None:intergenic |
| ATTTGGGGAGGCAAAGGTCA+AGG | 0.561672 | 4.1:+76937199 | MS.gene073529:CDS |
| CAGTGTCTTTCAAGCTCCAA+CGG | 0.565417 | 4.1:+76936471 | MS.gene073529:CDS |
| ATGAACTTACTGGCGAAGAC+CGG | 0.570181 | 4.1:-76936542 | None:intergenic |
| ACAAGCTTGTCCATAAATGC+AGG | 0.573184 | 4.1:-76937115 | None:intergenic |
| TGATGCAGGAGCTGGTAGAA+TGG | 0.573216 | 4.1:+76937570 | MS.gene073529:CDS |
| AAGAACAAGAGAATGTGAAG+AGG | 0.574498 | 4.1:+76938478 | MS.gene073529:CDS |
| TGGAGCCATTAACATGGCAC+AGG | 0.576795 | 4.1:+76935582 | MS.gene073529:CDS |
| TCTTCTTTGTTGTACATACC+GGG | 0.579180 | 4.1:-76937679 | None:intergenic |
| GGTTGTCAGCAATGTTCATG+AGG | 0.579374 | 4.1:-76937639 | None:intergenic |
| AGCCCTATAATGATGAGTGC+CGG | 0.586108 | 4.1:+76937433 | MS.gene073529:intron |
| ACTAGAATACGGAAATATGT+TGG | 0.586255 | 4.1:+76938452 | MS.gene073529:CDS |
| CGGGAAGTTGAACATTGGTA+GGG | 0.586332 | 4.1:-76937660 | None:intergenic |
| CCCCAAATGCCCAAAATGAG+AGG | 0.592582 | 4.1:-76937184 | None:intergenic |
| GCAGACCTCAAAGGACAGAT+GGG | 0.592933 | 4.1:+76936384 | MS.gene073529:CDS |
| TTGGATATCTGGTATTGGTG+TGG | 0.595454 | 4.1:+76938350 | MS.gene073529:CDS |
| GAGCTTGTCTTTGCCAAGAT+GGG | 0.595810 | 4.1:+76937238 | MS.gene073529:CDS |
| CACAAGGGGAAAGGGAAAGG+TGG | 0.605010 | 4.1:+76936447 | MS.gene073529:CDS |
| GTTGTCAGCAATGTTCATGA+GGG | 0.605287 | 4.1:-76937638 | None:intergenic |
| AGACTTGTGAATTCAAAAGA+GGG | 0.610232 | 4.1:+76938387 | MS.gene073529:CDS |
| TAGTGAGTTCCAGCATCCGT+TGG | 0.612756 | 4.1:-76936487 | None:intergenic |
| AGAACAAGAGAATGTGAAGA+GGG | 0.613350 | 4.1:+76938479 | MS.gene073529:CDS |
| AATTGTTGGAGCCATTAACA+TGG | 0.617506 | 4.1:+76935576 | MS.gene073529:CDS |
| TGAGGAAAAGCAGACCTCAA+AGG | 0.617972 | 4.1:+76936375 | MS.gene073529:CDS |
| GATATCCTGTTGGTCATCTG+AGG | 0.618471 | 4.1:-76936425 | None:intergenic |
| AAATTGAACGGCTCTAGCAG+TGG | 0.620869 | 4.1:+76936235 | MS.gene073529:CDS |
| AGTGCCGGAGAATTGGAAAG+TGG | 0.623122 | 4.1:+76937448 | MS.gene073529:CDS |
| CTGCAAAGTTGATTAGGCAA+AGG | 0.623429 | 4.1:+76937485 | MS.gene073529:CDS |
| TGTATGCAGTTGAAATTGAA+CGG | 0.623551 | 4.1:+76936223 | MS.gene073529:intron |
| CCTACTCGTGATGATAGGGT+TGG | 0.628308 | 4.1:+76937799 | MS.gene073529:CDS |
| CTCCAAGAGCTGCCTGACTG+AGG | 0.628443 | 4.1:-76938521 | None:intergenic |
| CCGACAGCCAGAAGTGACGA+TGG | 0.630990 | 4.1:+76938793 | MS.gene073529:CDS |
| GACCAACAGGATATCACAAG+GGG | 0.645088 | 4.1:+76936433 | MS.gene073529:CDS |
| CAGTGACGATGATAGGAACA+CGG | 0.649609 | 4.1:-76937708 | None:intergenic |
| CATACCGGGAAGTTGAACAT+TGG | 0.657559 | 4.1:-76937665 | None:intergenic |
| ATACACAGTCAATAACCAGA+TGG | 0.667649 | 4.1:+76937606 | MS.gene073529:CDS |
| AGTGACGATGATAGGAACAC+GGG | 0.670958 | 4.1:-76937707 | None:intergenic |
| ATGACCAACAGGATATCACA+AGG | 0.671981 | 4.1:+76936431 | MS.gene073529:CDS |
| GCAGGAGCTGGTAGAATGGG+TGG | 0.672116 | 4.1:+76937574 | MS.gene073529:CDS |
| CCAACCCTATCATCACGAGT+AGG | 0.676755 | 4.1:-76937799 | None:intergenic |
| GATAGGGTTGGTGTATGTCA+AGG | 0.678055 | 4.1:+76937811 | MS.gene073529:CDS |
| TGACCAACAGGATATCACAA+GGG | 0.701639 | 4.1:+76936432 | MS.gene073529:CDS |
| GATTAGGCAAAGGTACCGTG+AGG | 0.742836 | 4.1:+76937495 | MS.gene073529:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CTATATACATAAAAAAAAAT+TGG | + | chr4.1:76935721-76935740 | MS.gene073529:intron | 10.0% |
| !!! | TTAAATTTTGAATTATTTTG+AGG | + | chr4.1:76936913-76936932 | MS.gene073529:intron | 10.0% |
| !! | CATGGTTAATAATAAATATA+AGG | - | chr4.1:76938220-76938239 | None:intergenic | 15.0% |
| !!! | TACAGAAAATTTTATCAAAA+GGG | - | chr4.1:76936863-76936882 | None:intergenic | 15.0% |
| !!! | TTTTCTGTTATTATCTTAAA+AGG | + | chr4.1:76938597-76938616 | MS.gene073529:intron | 15.0% |
| !! | AATCTTTGTTAACTGAAATA+AGG | - | chr4.1:76936572-76936591 | None:intergenic | 20.0% |
| !! | ACAAATAGATACATAATAGA+AGG | - | chr4.1:76935868-76935887 | None:intergenic | 20.0% |
| !! | ATGCTAATTTACTTATTCTT+AGG | + | chr4.1:76936643-76936662 | MS.gene073529:intron | 20.0% |
| !! | GATAATAACAGAAAAATCAA+AGG | - | chr4.1:76938592-76938611 | None:intergenic | 20.0% |
| !! | TACATAAAATGATAACACTT+CGG | - | chr4.1:76936615-76936634 | None:intergenic | 20.0% |
| !! | TAGTAGATATTTGTATCAAT+TGG | - | chr4.1:76936733-76936752 | None:intergenic | 20.0% |
| !! | TGATATTCTAGGTTATAATA+TGG | + | chr4.1:76936944-76936963 | MS.gene073529:intron | 20.0% |
| !!! | CATTTCTTTGTAGATTTTTT+TGG | + | chr4.1:76938288-76938307 | MS.gene073529:intron | 20.0% |
| !!! | CTACAGAAAATTTTATCAAA+AGG | - | chr4.1:76936864-76936883 | None:intergenic | 20.0% |
| !!! | TTCCTGTATTATTTGATTTA+TGG | + | chr4.1:76936889-76936908 | MS.gene073529:intron | 20.0% |
| ! | AAAAATGCTGAATTTGTCAT+AGG | - | chr4.1:76936265-76936284 | None:intergenic | 25.0% |
| ! | AAGAATGTTATCTTACTGTT+TGG | + | chr4.1:76938693-76938712 | MS.gene073529:intron | 25.0% |
| ! | AAGGTAAAAAGAAATTTGAC+AGG | + | chr4.1:76937264-76937283 | MS.gene073529:intron | 25.0% |
| ! | ACGTATGGAAAAATTCTATT+GGG | + | chr4.1:76937774-76937793 | MS.gene073529:CDS | 25.0% |
| ! | ACTCCAAATTGAATGAAAAT+TGG | - | chr4.1:76936166-76936185 | None:intergenic | 25.0% |
| ! | AGCCATAAATCAAATAATAC+AGG | - | chr4.1:76936894-76936913 | None:intergenic | 25.0% |
| ! | ATGAGAGGAATCTTAATATT+TGG | - | chr4.1:76937172-76937191 | None:intergenic | 25.0% |
| ! | CTATTTGTATGAGTGTTAAT+AGG | + | chr4.1:76935880-76935899 | MS.gene073529:intron | 25.0% |
| ! | TATCAGTATCTTACGATATA+TGG | + | chr4.1:76936674-76936693 | MS.gene073529:intron | 25.0% |
| !! | ATGACAAATTCAGCATTTTT+CGG | + | chr4.1:76936265-76936284 | MS.gene073529:CDS | 25.0% |
| !! | ATTAAGATTCCTCTCATTTT+GGG | + | chr4.1:76937175-76937194 | MS.gene073529:CDS | 25.0% |
| !! | GTGTTATCATTTTATGTACT+TGG | + | chr4.1:76936617-76936636 | MS.gene073529:intron | 25.0% |
| !! | GTTCCAATTTTCATTCAATT+TGG | + | chr4.1:76936160-76936179 | MS.gene073529:intron | 25.0% |
| !! | TATTAAGATTCCTCTCATTT+TGG | + | chr4.1:76937174-76937193 | MS.gene073529:CDS | 25.0% |
| !! | TTCATTCAATTTGGAGTTTA+TGG | + | chr4.1:76936169-76936188 | MS.gene073529:intron | 25.0% |
| !!! | AGTCAAAATTTCTAGTTACT+AGG | + | chr4.1:76937935-76937954 | MS.gene073529:intron | 25.0% |
| !!! | ATTTTGAATTATTTTGAGGC+TGG | + | chr4.1:76936917-76936936 | MS.gene073529:intron | 25.0% |
| !!! | GTCAAAATTTCTAGTTACTA+GGG | + | chr4.1:76937936-76937955 | MS.gene073529:intron | 25.0% |
| AAGACTTGTGAATTCAAAAG+AGG | + | chr4.1:76938386-76938405 | MS.gene073529:CDS | 30.0% | |
| AATATGGACAACACAATAGA+TGG | + | chr4.1:76937079-76937098 | MS.gene073529:CDS | 30.0% | |
| AATCTGGATTTGATATGTTC+AGG | + | chr4.1:76937053-76937072 | MS.gene073529:intron | 30.0% | |
| AATGAAAATTGGAACAGACT+CGG | - | chr4.1:76936155-76936174 | None:intergenic | 30.0% | |
| AATGATCTGAAAACAGCTTA+CGG | - | chr4.1:76938034-76938053 | None:intergenic | 30.0% | |
| ACTAGAATACGGAAATATGT+TGG | + | chr4.1:76938452-76938471 | MS.gene073529:CDS | 30.0% | |
| AGACTTGTGAATTCAAAAGA+GGG | + | chr4.1:76938387-76938406 | MS.gene073529:CDS | 30.0% | |
| AGGTGCATCATGTATATTAA+CGG | - | chr4.1:76935848-76935867 | None:intergenic | 30.0% | |
| AGTCATGGTTTCAAAAGAAA+AGG | - | chr4.1:76936084-76936103 | None:intergenic | 30.0% | |
| ATAAGGTGAAATGAACTTAC+TGG | - | chr4.1:76936555-76936574 | None:intergenic | 30.0% | |
| ATGCTTCTCTTAACAAACTT+TGG | + | chr4.1:76935609-76935628 | MS.gene073529:intron | 30.0% | |
| ATTATAGGGCTAAATTTCCA+AGG | - | chr4.1:76937424-76937443 | None:intergenic | 30.0% | |
| ATTGACAAGCTACTAGAATA+CGG | + | chr4.1:76938441-76938460 | MS.gene073529:CDS | 30.0% | |
| CTAGATTAGCAATAAGAGTT+TGG | + | chr4.1:76935766-76935785 | MS.gene073529:intron | 30.0% | |
| GACGTATGGAAAAATTCTAT+TGG | + | chr4.1:76937773-76937792 | MS.gene073529:CDS | 30.0% | |
| GGCAAAAATTGACTATAATG+AGG | + | chr4.1:76936357-76936376 | MS.gene073529:CDS | 30.0% | |
| GGTTAATTGAGGACTAATAA+CGG | + | chr4.1:76936190-76936209 | MS.gene073529:intron | 30.0% | |
| TCCTATGATTATATCAGTAC+CGG | + | chr4.1:76936523-76936542 | MS.gene073529:CDS | 30.0% | |
| TGATATGTTCAGGTACAATA+TGG | + | chr4.1:76937063-76937082 | MS.gene073529:intron | 30.0% | |
| TGTATGCAGTTGAAATTGAA+CGG | + | chr4.1:76936223-76936242 | MS.gene073529:intron | 30.0% | |
| TTGAAACTTAGATTGAGCTA+TGG | - | chr4.1:76937916-76937935 | None:intergenic | 30.0% | |
| TTGGAGTTTATGGTTAATTG+AGG | + | chr4.1:76936179-76936198 | MS.gene073529:intron | 30.0% | |
| TTTACTTATTCTTAGGCACA+TGG | + | chr4.1:76936650-76936669 | MS.gene073529:intron | 30.0% | |
| TTTGATTCACGATTTGAATC+TGG | + | chr4.1:76937037-76937056 | MS.gene073529:intron | 30.0% | |
| ! | AACTCTTTTATCTACTTCCT+TGG | + | chr4.1:76937404-76937423 | MS.gene073529:intron | 30.0% |
| ! | ATTCCAATCTTTTGATATCG+TGG | + | chr4.1:76935956-76935975 | MS.gene073529:intron | 30.0% |
| ! | TTTTTACCTTATTCCCATCT+TGG | - | chr4.1:76937254-76937273 | None:intergenic | 30.0% |
| !! | CTTTCCTTTTCTGATAATGT+CGG | - | chr4.1:76937524-76937543 | None:intergenic | 30.0% |
| !! | TAGGTCTAAAGCAAACTTTT+AGG | - | chr4.1:76938628-76938647 | None:intergenic | 30.0% |
| !! | TCTAATTGATAGTGTGTCTT+AGG | + | chr4.1:76937001-76937020 | MS.gene073529:intron | 30.0% |
| !! | TGACATTTTTAAGCAAGAAC+AGG | - | chr4.1:76936978-76936997 | None:intergenic | 30.0% |
| !!! | AGATTTTTTTGGTGCATTGA+GGG | + | chr4.1:76938299-76938318 | MS.gene073529:intron | 30.0% |
| !!! | TAGATTTTTTTGGTGCATTG+AGG | + | chr4.1:76938298-76938317 | MS.gene073529:intron | 30.0% |
| AAGAACAAGAGAATGTGAAG+AGG | + | chr4.1:76938478-76938497 | MS.gene073529:CDS | 35.0% | |
| AATTGTTGGAGCCATTAACA+TGG | + | chr4.1:76935576-76935595 | MS.gene073529:CDS | 35.0% | |
| AGAACAAGAGAATGTGAAGA+GGG | + | chr4.1:76938479-76938498 | MS.gene073529:CDS | 35.0% | |
| AGCTTGTCAATAGTCATCTT+TGG | - | chr4.1:76938432-76938451 | None:intergenic | 35.0% | |
| AGGAATTGGATATCTGGTAT+TGG | + | chr4.1:76938345-76938364 | MS.gene073529:CDS | 35.0% | |
| ATACACAGTCAATAACCAGA+TGG | + | chr4.1:76937606-76937625 | MS.gene073529:CDS | 35.0% | |
| ATACGTCCATCACGAATTAA+AGG | - | chr4.1:76937760-76937779 | None:intergenic | 35.0% | |
| ATCAAGACTGGAAACTTCTA+TGG | + | chr4.1:76938561-76938580 | MS.gene073529:CDS | 35.0% | |
| ATCTTGACAATGTCATCCTT+AGG | - | chr4.1:76937859-76937878 | None:intergenic | 35.0% | |
| ATCTTTGGTTGCTCAAAAGT+TGG | - | chr4.1:76938417-76938436 | None:intergenic | 35.0% | |
| ATTGCTAATCTAGCACATCT+TGG | - | chr4.1:76935759-76935778 | None:intergenic | 35.0% | |
| ATTTCCACTTTCCAATTCTC+CGG | - | chr4.1:76937455-76937474 | None:intergenic | 35.0% | |
| CTAACTATGATACTTGGCTT+AGG | + | chr4.1:76937343-76937362 | MS.gene073529:intron | 35.0% | |
| GAGTTTGTCTGGTAACTTTA+AGG | + | chr4.1:76936330-76936349 | MS.gene073529:CDS | 35.0% | |
| GTATATTGCACCTGCATTTA+TGG | + | chr4.1:76937105-76937124 | MS.gene073529:CDS | 35.0% | |
| TATGCTCCTTTAATTCGTGA+TGG | + | chr4.1:76937751-76937770 | MS.gene073529:CDS | 35.0% | |
| TCTCCACGATATCAAAAGAT+TGG | - | chr4.1:76935962-76935981 | None:intergenic | 35.0% | |
| TCTTCACATTCTCTTGTTCT+TGG | - | chr4.1:76938479-76938498 | None:intergenic | 35.0% | |
| TCTTGACAATGTCATCCTTA+GGG | - | chr4.1:76937858-76937877 | None:intergenic | 35.0% | |
| TTATCTTACTGTTTGGATGC+AGG | + | chr4.1:76938700-76938719 | MS.gene073529:intron | 35.0% | |
| TTCATCAATGATCTTGATGC+AGG | + | chr4.1:76937556-76937575 | MS.gene073529:CDS | 35.0% | |
| ! | CTCTTCTTTGTTGTACATAC+CGG | - | chr4.1:76937683-76937702 | None:intergenic | 35.0% |
| ! | GATCATAGTTTTCTGCAGAA+GGG | - | chr4.1:76938774-76938793 | None:intergenic | 35.0% |
| ! | TACTAACAAAAGCACATCTG+AGG | + | chr4.1:76937970-76937989 | MS.gene073529:intron | 35.0% |
| ! | TCTTCTTTGTTGTACATACC+GGG | - | chr4.1:76937682-76937701 | None:intergenic | 35.0% |
| !! | ACCGGTACTGATATAATCAT+AGG | - | chr4.1:76936527-76936546 | None:intergenic | 35.0% |
| !! | GTCTGGTAACTTTAAGGTTT+CGG | + | chr4.1:76936336-76936355 | MS.gene073529:CDS | 35.0% |
| !! | GTGTATGTCAAGGTATTTTC+AGG | + | chr4.1:76937821-76937840 | MS.gene073529:CDS | 35.0% |
| !! | TTTAATTCGTGATGGACGTA+TGG | + | chr4.1:76937759-76937778 | MS.gene073529:CDS | 35.0% |
| AAAGGTTTGCAGCTGCAATT+TGG | - | chr4.1:76936066-76936085 | None:intergenic | 40.0% | |
| AATGACGATGCTATCAAGAC+TGG | + | chr4.1:76938549-76938568 | MS.gene073529:CDS | 40.0% | |
| ACAAGCTTGTCCATAAATGC+AGG | - | chr4.1:76937118-76937137 | None:intergenic | 40.0% | |
| AGAATCATCACTGTGAATCG+TGG | - | chr4.1:76936798-76936817 | None:intergenic | 40.0% | |
| AGACTACAGACTTAGAGTCA+TGG | - | chr4.1:76936099-76936118 | None:intergenic | 40.0% | |
| AGGCTGGTAGATGATATTCT+AGG | + | chr4.1:76936933-76936952 | MS.gene073529:intron | 40.0% | |
| AGTTACCAGACAAACTCTTC+TGG | - | chr4.1:76936327-76936346 | None:intergenic | 40.0% | |
| ATGACCAACAGGATATCACA+AGG | + | chr4.1:76936431-76936450 | MS.gene073529:CDS | 40.0% | |
| ATGACGATGAAGTCAGGAAT+TGG | + | chr4.1:76938331-76938350 | MS.gene073529:CDS | 40.0% | |
| ATGATACTTGGCTTAGGAGT+AGG | + | chr4.1:76937349-76937368 | MS.gene073529:intron | 40.0% | |
| CAAGTCTCGAACTCATATCA+TGG | - | chr4.1:76938238-76938257 | None:intergenic | 40.0% | |
| CACACGCTAACTATGATACT+TGG | + | chr4.1:76937337-76937356 | MS.gene073529:intron | 40.0% | |
| CATGATATGAGTTCGAGACT+TGG | + | chr4.1:76938236-76938255 | MS.gene073529:intron | 40.0% | |
| CTACGACAAATATGTCGTGT+CGG | + | chr4.1:76938645-76938664 | MS.gene073529:intron | 40.0% | |
| CTTTGCCTAATCAACTTTGC+AGG | - | chr4.1:76937487-76937506 | None:intergenic | 40.0% | |
| GAAGTCAGGAATTGGATATC+TGG | + | chr4.1:76938339-76938358 | MS.gene073529:CDS | 40.0% | |
| GAATTGGAAAGTGGAAATGC+AGG | + | chr4.1:76937457-76937476 | MS.gene073529:CDS | 40.0% | |
| GATTTGAACTCTATCCCTTG+AGG | - | chr4.1:76935800-76935819 | None:intergenic | 40.0% | |
| GCAACTTCTGTGACAATTGT+TGG | + | chr4.1:76935562-76935581 | MS.gene073529:CDS | 40.0% | |
| GCACATCTTGGACATAAGAA+TGG | - | chr4.1:76935747-76935766 | None:intergenic | 40.0% | |
| GCTGTTTGCATAAGCTATCA+TGG | - | chr4.1:76938068-76938087 | None:intergenic | 40.0% | |
| GTTGTCAGCAATGTTCATGA+GGG | - | chr4.1:76937641-76937660 | None:intergenic | 40.0% | |
| TCATTTCCAGTGACGATGAT+AGG | - | chr4.1:76937718-76937737 | None:intergenic | 40.0% | |
| TCTTTGCCAAGATGGGAATA+AGG | + | chr4.1:76937245-76937264 | MS.gene073529:CDS | 40.0% | |
| TGACCAACAGGATATCACAA+GGG | + | chr4.1:76936432-76936451 | MS.gene073529:CDS | 40.0% | |
| TGTCGGTCTTGACAATAACT+TGG | + | chr4.1:76938662-76938681 | MS.gene073529:intron | 40.0% | |
| TTCTACCTGTGCCATGTTAA+TGG | - | chr4.1:76935590-76935609 | None:intergenic | 40.0% | |
| TTTGGTTGCTCAAAAGTTGG+AGG | - | chr4.1:76938414-76938433 | None:intergenic | 40.0% | |
| ! | CTGCAAAGTTGATTAGGCAA+AGG | + | chr4.1:76937485-76937504 | MS.gene073529:CDS | 40.0% |
| ! | GGATCATAGTTTTCTGCAGA+AGG | - | chr4.1:76938775-76938794 | None:intergenic | 40.0% |
| ! | TCCTCTCATTTTGGGCATTT+GGG | + | chr4.1:76937183-76937202 | MS.gene073529:CDS | 40.0% |
| ! | TTCCTCTCATTTTGGGCATT+TGG | + | chr4.1:76937182-76937201 | MS.gene073529:CDS | 40.0% |
| !! | CAAGGTATTTTCAGGACAGA+TGG | + | chr4.1:76937829-76937848 | MS.gene073529:CDS | 40.0% |
| !! | TCGCAGAACTAGCTTTCTTA+AGG | - | chr4.1:76936297-76936316 | None:intergenic | 40.0% |
| !! | TTGGATATCTGGTATTGGTG+TGG | + | chr4.1:76938350-76938369 | MS.gene073529:CDS | 40.0% |
| AAGATTGTCGACACATTCCC+TGG | + | chr4.1:76937874-76937893 | MS.gene073529:CDS | 45.0% | |
| AATGATCTTGATGCAGGAGC+TGG | + | chr4.1:76937562-76937581 | MS.gene073529:CDS | 45.0% | |
| ACAGGATATCACAAGGGGAA+AGG | + | chr4.1:76936438-76936457 | MS.gene073529:CDS | 45.0% | |
| ACATTCCCTGGACAGTCAAT+TGG | + | chr4.1:76937886-76937905 | MS.gene073529:CDS | 45.0% | |
| AGCCCTATAATGATGAGTGC+CGG | + | chr4.1:76937433-76937452 | MS.gene073529:intron | 45.0% | |
| AGCTGACAAATACCTCAGTC+AGG | + | chr4.1:76938509-76938528 | MS.gene073529:CDS | 45.0% | |
| AGTGACGATGATAGGAACAC+GGG | - | chr4.1:76937710-76937729 | None:intergenic | 45.0% | |
| ATAGAGTTCAAATCCCCTCG+GGG | + | chr4.1:76935806-76935825 | MS.gene073529:intron | 45.0% | |
| ATGAACTTACTGGCGAAGAC+CGG | - | chr4.1:76936545-76936564 | None:intergenic | 45.0% | |
| CAACCTTCTTGGACAGGTAA+AGG | - | chr4.1:76938745-76938764 | None:intergenic | 45.0% | |
| CAGGATATCACAAGGGGAAA+GGG | + | chr4.1:76936439-76936458 | MS.gene073529:CDS | 45.0% | |
| CAGTGACGATGATAGGAACA+CGG | - | chr4.1:76937711-76937730 | None:intergenic | 45.0% | |
| CAGTGTCTTTCAAGCTCCAA+CGG | + | chr4.1:76936471-76936490 | MS.gene073529:CDS | 45.0% | |
| CATACCGGGAAGTTGAACAT+TGG | - | chr4.1:76937668-76937687 | None:intergenic | 45.0% | |
| CCTACCAATGTTCAACTTCC+CGG | + | chr4.1:76937661-76937680 | MS.gene073529:CDS | 45.0% | |
| CGACACGACATATTTGTCGT+AGG | - | chr4.1:76938647-76938666 | None:intergenic | 45.0% | |
| CGGGAAGTTGAACATTGGTA+GGG | - | chr4.1:76937663-76937682 | None:intergenic | 45.0% | |
| CTCCGGCACTCATCATTATA+GGG | - | chr4.1:76937438-76937457 | None:intergenic | 45.0% | |
| GACCAACAGGATATCACAAG+GGG | + | chr4.1:76936433-76936452 | MS.gene073529:CDS | 45.0% | |
| GAGCTTGTCTTTGCCAAGAT+GGG | + | chr4.1:76937238-76937257 | MS.gene073529:CDS | 45.0% | |
| GAGTGTATGACGATGAAGTC+AGG | + | chr4.1:76938325-76938344 | MS.gene073529:CDS | 45.0% | |
| GATAGAGTTCAAATCCCCTC+GGG | + | chr4.1:76935805-76935824 | MS.gene073529:intron | 45.0% | |
| GATATCCTGTTGGTCATCTG+AGG | - | chr4.1:76936428-76936447 | None:intergenic | 45.0% | |
| GCGTCCGACATTATCAGAAA+AGG | + | chr4.1:76937517-76937536 | MS.gene073529:CDS | 45.0% | |
| GCTTACCAATTGACTGTCCA+GGG | - | chr4.1:76937894-76937913 | None:intergenic | 45.0% | |
| GGATAGAGTTCAAATCCCCT+CGG | + | chr4.1:76935804-76935823 | MS.gene073529:intron | 45.0% | |
| GGGCAGACTACAACAAGTTT+AGG | - | chr4.1:76936843-76936862 | None:intergenic | 45.0% | |
| GGTTGTCAGCAATGTTCATG+AGG | - | chr4.1:76937642-76937661 | None:intergenic | 45.0% | |
| GTTCCTTTACCTGTCCAAGA+AGG | + | chr4.1:76938739-76938758 | MS.gene073529:CDS | 45.0% | |
| TACTGTTTGGATGCAGGACA+AGG | + | chr4.1:76938706-76938725 | MS.gene073529:intron | 45.0% | |
| TATCACAAGGGGAAAGGGAA+AGG | + | chr4.1:76936444-76936463 | MS.gene073529:CDS | 45.0% | |
| TCTCCGGCACTCATCATTAT+AGG | - | chr4.1:76937439-76937458 | None:intergenic | 45.0% | |
| TGAGCTTGTCTTTGCCAAGA+TGG | + | chr4.1:76937237-76937256 | MS.gene073529:CDS | 45.0% | |
| TGAGGAAAAGCAGACCTCAA+AGG | + | chr4.1:76936375-76936394 | MS.gene073529:CDS | 45.0% | |
| TGAGGGTTGCATTTACCATC+TGG | - | chr4.1:76937624-76937643 | None:intergenic | 45.0% | |
| TTCCCCTTGTGATATCCTGT+TGG | - | chr4.1:76936438-76936457 | None:intergenic | 45.0% | |
| ! | AAATTGAACGGCTCTAGCAG+TGG | + | chr4.1:76936235-76936254 | MS.gene073529:CDS | 45.0% |
| ! | CCTCTCATTTTGGGCATTTG+GGG | + | chr4.1:76937184-76937203 | MS.gene073529:CDS | 45.0% |
| ! | GAGAGCCTGCAAAGTTGATT+AGG | + | chr4.1:76937479-76937498 | MS.gene073529:CDS | 45.0% |
| !! | AATGATGAGTGCCGGAGAAT+TGG | + | chr4.1:76937441-76937460 | MS.gene073529:CDS | 45.0% |
| !! | GATAGGGTTGGTGTATGTCA+AGG | + | chr4.1:76937811-76937830 | MS.gene073529:CDS | 45.0% |
| !! | GGTATTGGTGTGGAGAGTAT+TGG | + | chr4.1:76938360-76938379 | MS.gene073529:CDS | 45.0% |
| ACCAGACAAACTCTTCTGGC+TGG | - | chr4.1:76936323-76936342 | None:intergenic | 50.0% | |
| AGCAGACCTCAAAGGACAGA+TGG | + | chr4.1:76936383-76936402 | MS.gene073529:CDS | 50.0% | |
| AGTTTGGCCATGCAACCTCA+AGG | + | chr4.1:76935782-76935801 | MS.gene073529:intron | 50.0% | |
| ATTTGGGGAGGCAAAGGTCA+AGG | + | chr4.1:76937199-76937218 | MS.gene073529:CDS | 50.0% | |
| CCAACCCTATCATCACGAGT+AGG | - | chr4.1:76937802-76937821 | None:intergenic | 50.0% | |
| CCCCAAATGCCCAAAATGAG+AGG | - | chr4.1:76937187-76937206 | None:intergenic | 50.0% | |
| CCGGGAAGTTGAACATTGGT+AGG | - | chr4.1:76937664-76937683 | None:intergenic | 50.0% | |
| CCTACTCGTGATGATAGGGT+TGG | + | chr4.1:76937799-76937818 | MS.gene073529:CDS | 50.0% | |
| CGTGTTCCTATCATCGTCAC+TGG | + | chr4.1:76937709-76937728 | MS.gene073529:CDS | 50.0% | |
| CTCTATCCCTTGAGGTTGCA+TGG | - | chr4.1:76935792-76935811 | None:intergenic | 50.0% | |
| GATGCAGGAGCTGGTAGAAT+GGG | + | chr4.1:76937571-76937590 | MS.gene073529:CDS | 50.0% | |
| GCAACTTCCATCGTCACTTC+TGG | - | chr4.1:76938803-76938822 | None:intergenic | 50.0% | |
| GCAGACCTCAAAGGACAGAT+GGG | + | chr4.1:76936384-76936403 | MS.gene073529:CDS | 50.0% | |
| GGCTTACCAATTGACTGTCC+AGG | - | chr4.1:76937895-76937914 | None:intergenic | 50.0% | |
| GTTTGGCCATGCAACCTCAA+GGG | + | chr4.1:76935783-76935802 | MS.gene073529:intron | 50.0% | |
| TAGTGAGTTCCAGCATCCGT+TGG | - | chr4.1:76936490-76936509 | None:intergenic | 50.0% | |
| TCCAGCCAGAAGAGTTTGTC+TGG | + | chr4.1:76936319-76936338 | MS.gene073529:CDS | 50.0% | |
| TGACACCTCAGATGACCAAC+AGG | + | chr4.1:76936420-76936439 | MS.gene073529:CDS | 50.0% | |
| TGATGCAGGAGCTGGTAGAA+TGG | + | chr4.1:76937570-76937589 | MS.gene073529:CDS | 50.0% | |
| TGGAGCCATTAACATGGCAC+AGG | + | chr4.1:76935582-76935601 | MS.gene073529:CDS | 50.0% | |
| TTTCAAGCTCCAACGGATGC+TGG | + | chr4.1:76936478-76936497 | MS.gene073529:CDS | 50.0% | |
| ! | AGTGCCGGAGAATTGGAAAG+TGG | + | chr4.1:76937448-76937467 | MS.gene073529:CDS | 50.0% |
| ! | ATTTTACTACCGTGCCCCGA+GGG | - | chr4.1:76935823-76935842 | None:intergenic | 50.0% |
| ! | CTCATTTTGGGCATTTGGGG+AGG | + | chr4.1:76937187-76937206 | MS.gene073529:CDS | 50.0% |
| ! | TATTTTACTACCGTGCCCCG+AGG | - | chr4.1:76935824-76935843 | None:intergenic | 50.0% |
| ! | TGATAATGTCGGACGCCTCA+CGG | - | chr4.1:76937513-76937532 | None:intergenic | 50.0% |
| !! | GATTAGGCAAAGGTACCGTG+AGG | + | chr4.1:76937495-76937514 | MS.gene073529:CDS | 50.0% |
| AAGGGTCAGCGCAACCTTCT+TGG | - | chr4.1:76938756-76938775 | None:intergenic | 55.0% | |
| ACCTCAAAGGACAGATGGGC+TGG | + | chr4.1:76936388-76936407 | MS.gene073529:CDS | 55.0% | |
| ATGTCTCCGCGCTCACAACT+TGG | - | chr4.1:76936023-76936042 | None:intergenic | 55.0% | |
| CACAAGGGGAAAGGGAAAGG+TGG | + | chr4.1:76936447-76936466 | MS.gene073529:CDS | 55.0% | |
| CAGGACAGATGGTGTCCCTA+AGG | + | chr4.1:76937840-76937859 | MS.gene073529:CDS | 55.0% | |
| GGCGCCTACTCGTGATGATA+GGG | + | chr4.1:76937795-76937814 | MS.gene073529:CDS | 55.0% | |
| TACCTCAGTCAGGCAGCTCT+TGG | + | chr4.1:76938519-76938538 | MS.gene073529:CDS | 55.0% | |
| TCACAACTTGGACGCGGTTG+AGG | - | chr4.1:76936011-76936030 | None:intergenic | 55.0% | |
| TCAGCGCAACCTTCTTGGAC+AGG | - | chr4.1:76938751-76938770 | None:intergenic | 55.0% | |
| TCCAGCCCATCTGTCCTTTG+AGG | - | chr4.1:76936392-76936411 | None:intergenic | 55.0% | |
| TTGGGCATTTGGGGAGGCAA+AGG | + | chr4.1:76937193-76937212 | MS.gene073529:CDS | 55.0% | |
| ! | CCATCGTCACTTCTGGCTGT+CGG | - | chr4.1:76938796-76938815 | None:intergenic | 55.0% |
| ! | TTTTACTACCGTGCCCCGAG+GGG | - | chr4.1:76935822-76935841 | None:intergenic | 55.0% |
| CCGACAGCCAGAAGTGACGA+TGG | + | chr4.1:76938793-76938812 | MS.gene073529:CDS | 60.0% | |
| CTCCAAGAGCTGCCTGACTG+AGG | - | chr4.1:76938524-76938543 | None:intergenic | 60.0% | |
| GCAGGAGCTGGTAGAATGGG+TGG | + | chr4.1:76937574-76937593 | MS.gene073529:CDS | 60.0% | |
| GGGCGCCTACTCGTGATGAT+AGG | + | chr4.1:76937794-76937813 | MS.gene073529:CDS | 60.0% | |
| GTTCAAATCCCCTCGGGGCA+CGG | + | chr4.1:76935811-76935830 | MS.gene073529:intron | 60.0% | |
| CCGCGCTCACAACTTGGACG+CGG | - | chr4.1:76936017-76936036 | None:intergenic | 65.0% | |
| CCGCGTCCAAGTTGTGAGCG+CGG | + | chr4.1:76936014-76936033 | MS.gene073529:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 76935559 | 76938837 | 76935559 | ID=MS.gene073529 |
| chr4.1 | mRNA | 76935559 | 76938837 | 76935559 | ID=MS.gene073529.t1;Parent=MS.gene073529 |
| chr4.1 | exon | 76935559 | 76935603 | 76935559 | ID=MS.gene073529.t1.exon1;Parent=MS.gene073529.t1 |
| chr4.1 | CDS | 76935559 | 76935603 | 76935559 | ID=cds.MS.gene073529.t1;Parent=MS.gene073529.t1 |
| chr4.1 | exon | 76936232 | 76936554 | 76936232 | ID=MS.gene073529.t1.exon2;Parent=MS.gene073529.t1 |
| chr4.1 | CDS | 76936232 | 76936554 | 76936232 | ID=cds.MS.gene073529.t1;Parent=MS.gene073529.t1 |
| chr4.1 | exon | 76937075 | 76937266 | 76937075 | ID=MS.gene073529.t1.exon3;Parent=MS.gene073529.t1 |
| chr4.1 | CDS | 76937075 | 76937266 | 76937075 | ID=cds.MS.gene073529.t1;Parent=MS.gene073529.t1 |
| chr4.1 | exon | 76937435 | 76937907 | 76937435 | ID=MS.gene073529.t1.exon4;Parent=MS.gene073529.t1 |
| chr4.1 | CDS | 76937435 | 76937907 | 76937435 | ID=cds.MS.gene073529.t1;Parent=MS.gene073529.t1 |
| chr4.1 | exon | 76938301 | 76938582 | 76938301 | ID=MS.gene073529.t1.exon5;Parent=MS.gene073529.t1 |
| chr4.1 | CDS | 76938301 | 76938582 | 76938301 | ID=cds.MS.gene073529.t1;Parent=MS.gene073529.t1 |
| chr4.1 | exon | 76938722 | 76938837 | 76938722 | ID=MS.gene073529.t1.exon6;Parent=MS.gene073529.t1 |
| chr4.1 | CDS | 76938722 | 76938837 | 76938722 | ID=cds.MS.gene073529.t1;Parent=MS.gene073529.t1 |
| Gene Sequence |
| Protein sequence |
