Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene08578.t1 | XP_003606501.2 | 96.4 | 358 | 13 | 0 | 1 | 358 | 701 | 1058 | 5.00E-184 | 653.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene08578.t1 | Q9FII7 | 55.9 | 354 | 156 | 0 | 5 | 358 | 704 | 1057 | 1.3e-100 | 367.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene08578.t1 | G7JRH6 | 96.4 | 358 | 13 | 0 | 1 | 358 | 701 | 1058 | 3.6e-184 | 653.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049254 | MS.gene08578 | 0.802039 | 6.78E-49 | -1.69E-46 |
MS.gene049343 | MS.gene08578 | 0.815278 | 1.00E-51 | -1.69E-46 |
MS.gene049825 | MS.gene08578 | 0.820194 | 7.80E-53 | -1.69E-46 |
MS.gene049850 | MS.gene08578 | 0.928189 | 4.11E-92 | -1.69E-46 |
MS.gene049873 | MS.gene08578 | 0.837808 | 4.18E-57 | -1.69E-46 |
MS.gene050156 | MS.gene08578 | 0.818545 | 1.85E-52 | -1.69E-46 |
MS.gene050355 | MS.gene08578 | 0.811624 | 6.38E-51 | -1.69E-46 |
MS.gene050799 | MS.gene08578 | 0.849106 | 4.00E-60 | -1.69E-46 |
MS.gene051719 | MS.gene08578 | 0.818294 | 2.11E-52 | -1.69E-46 |
MS.gene051720 | MS.gene08578 | 0.828017 | 1.14E-54 | -1.69E-46 |
MS.gene051744 | MS.gene08578 | 0.807311 | 5.38E-50 | -1.69E-46 |
MS.gene051957 | MS.gene08578 | 0.806301 | 8.79E-50 | -1.69E-46 |
MS.gene052519 | MS.gene08578 | 0.864178 | 1.47E-64 | -1.69E-46 |
MS.gene052582 | MS.gene08578 | 0.80236 | 5.82E-49 | -1.69E-46 |
MS.gene052584 | MS.gene08578 | 0.817242 | 3.65E-52 | -1.69E-46 |
MS.gene052611 | MS.gene08578 | 0.839487 | 1.54E-57 | -1.69E-46 |
MS.gene052612 | MS.gene08578 | 0.806214 | 9.17E-50 | -1.69E-46 |
MS.gene052773 | MS.gene08578 | 0.806355 | 8.56E-50 | -1.69E-46 |
MS.gene052843 | MS.gene08578 | 0.810263 | 1.26E-50 | -1.69E-46 |
MS.gene052863 | MS.gene08578 | 0.826271 | 2.97E-54 | -1.69E-46 |
MS.gene053145 | MS.gene08578 | 0.816397 | 5.65E-52 | -1.69E-46 |
MS.gene053226 | MS.gene08578 | 0.836699 | 8.03E-57 | -1.69E-46 |
MS.gene053900 | MS.gene08578 | 0.836412 | 9.50E-57 | -1.69E-46 |
MS.gene053967 | MS.gene08578 | 0.836855 | 7.32E-57 | -1.69E-46 |
MS.gene054651 | MS.gene08578 | 0.831163 | 1.95E-55 | -1.69E-46 |
MS.gene055166 | MS.gene08578 | 0.814105 | 1.82E-51 | -1.69E-46 |
MS.gene055466 | MS.gene08578 | 0.829479 | 5.03E-55 | -1.69E-46 |
MS.gene055818 | MS.gene08578 | 0.839744 | 1.32E-57 | -1.69E-46 |
MS.gene056366 | MS.gene08578 | 0.824115 | 9.61E-54 | -1.69E-46 |
MS.gene056595 | MS.gene08578 | 0.815368 | 9.58E-52 | -1.69E-46 |
MS.gene057060 | MS.gene08578 | 0.804167 | 2.46E-49 | -1.69E-46 |
MS.gene057314 | MS.gene08578 | 0.800326 | 1.52E-48 | -1.69E-46 |
MS.gene057915 | MS.gene08578 | 0.803691 | 3.09E-49 | -1.69E-46 |
MS.gene058037 | MS.gene08578 | 0.841222 | 5.42E-58 | -1.69E-46 |
MS.gene058625 | MS.gene08578 | 0.852651 | 4.01E-61 | -1.69E-46 |
MS.gene059015 | MS.gene08578 | 0.831699 | 1.44E-55 | -1.69E-46 |
MS.gene05954 | MS.gene08578 | 0.814086 | 1.84E-51 | -1.69E-46 |
MS.gene059842 | MS.gene08578 | 0.802505 | 5.43E-49 | -1.69E-46 |
MS.gene060429 | MS.gene08578 | 0.804432 | 2.17E-49 | -1.69E-46 |
MS.gene060572 | MS.gene08578 | 0.807384 | 5.19E-50 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene08578.t1 | MTR_4g061050 | 96.927 | 358 | 11 | 0 | 1 | 358 | 701 | 1058 | 0.0 | 716 |
MS.gene08578.t1 | MTR_4g036760 | 82.961 | 358 | 61 | 0 | 1 | 358 | 702 | 1059 | 0.0 | 618 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene08578.t1 | AT5G61460 | 55.932 | 354 | 156 | 0 | 5 | 358 | 704 | 1057 | 1.12e-128 | 394 |
MS.gene08578.t1 | AT5G07660 | 55.367 | 354 | 158 | 0 | 5 | 358 | 705 | 1058 | 1.83e-125 | 386 |
Find 79 sgRNAs with CRISPR-Local
Find 375 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AATTCATCCATTGCTCTAAA+TGG | 0.155010 | 4.1:-38226085 | None:intergenic |
GGATGAATTTGATGTCTTTA+TGG | 0.190524 | 4.1:+38226099 | MS.gene08578:CDS |
ATCTCAAGCATCAGCTTTCT+TGG | 0.206916 | 4.1:+38225017 | MS.gene08578:CDS |
CGAGACACAAGGGGACTTTC+AGG | 0.235502 | 4.1:+38225416 | MS.gene08578:CDS |
ATCCTCATGATCAGATTTAA+TGG | 0.238416 | 4.1:+38225123 | MS.gene08578:intron |
ACTGCAGGATAATGTTAAAA+AGG | 0.286872 | 4.1:+38223568 | MS.gene08578:intron |
AAAGGTCCTGCATGATATTA+AGG | 0.300329 | 4.1:+38222110 | MS.gene08578:CDS |
GTCATCCTGACAGCAAATTA+TGG | 0.302156 | 4.1:-38223594 | None:intergenic |
TTCGAAACTCTAAAGCATTA+TGG | 0.308827 | 4.1:-38224967 | None:intergenic |
CCGAATCAATTGATGATCTA+AGG | 0.311139 | 4.1:+38223855 | MS.gene08578:CDS |
ATTTCAGCACTGATTTGCTC+TGG | 0.324777 | 4.1:-38223650 | None:intergenic |
CAGCTCTGTTTGATGTATCT+TGG | 0.325637 | 4.1:-38225391 | None:intergenic |
AGCTCTGTTTGATGTATCTT+GGG | 0.341882 | 4.1:-38225390 | None:intergenic |
CAATATACCTAGTATCATTC+GGG | 0.359556 | 4.1:-38226409 | None:intergenic |
AAGAACGAAAGATTATAAAA+AGG | 0.361910 | 4.1:+38223894 | MS.gene08578:CDS |
GCTTGGTGAAGGGAGGGAAC+AGG | 0.377631 | 4.1:+38226844 | MS.gene08578:intron |
ATTCATCCATTGCTCTAAAT+GGG | 0.390531 | 4.1:-38226084 | None:intergenic |
CCAATATACCTAGTATCATT+CGG | 0.408883 | 4.1:-38226410 | None:intergenic |
TTTCAGCACTGATTTGCTCT+GGG | 0.418720 | 4.1:-38223649 | None:intergenic |
GGCTTCCATAATTTGCTGTC+AGG | 0.431592 | 4.1:+38223589 | MS.gene08578:CDS |
CACTTAGGCGTGAGAGCAAA+AGG | 0.434691 | 4.1:+38223690 | MS.gene08578:CDS |
CCTTAGATCATCAATTGATT+CGG | 0.435592 | 4.1:-38223855 | None:intergenic |
TACATTCAATTTCTGTCGAA+GGG | 0.470596 | 4.1:-38223933 | None:intergenic |
GCTTCGCTAGGAGGTTGTGA+TGG | 0.471159 | 4.1:+38223620 | MS.gene08578:CDS |
TGATCACCCCGAATGATACT+AGG | 0.480437 | 4.1:+38226402 | MS.gene08578:CDS |
CTTCATGCCTCCTCTGCTCA+AGG | 0.480838 | 4.1:-38221743 | None:intergenic |
GGAGGCAGAGGAACACTATC+GGG | 0.483532 | 4.1:+38222131 | MS.gene08578:CDS |
CAAATTTACCTCAATCGATA+AGG | 0.486609 | 4.1:-38225202 | None:intergenic |
ACTTATCAAAGTTGATTATG+AGG | 0.494408 | 4.1:+38225173 | MS.gene08578:CDS |
TCGGGGTGATCAATATCCAC+TGG | 0.514310 | 4.1:-38226391 | None:intergenic |
GTTCAGTCTCAGATTTCTCA+AGG | 0.519390 | 4.1:-38221945 | None:intergenic |
ATACATTCAATTTCTGTCGA+AGG | 0.519826 | 4.1:-38223934 | None:intergenic |
CAGGATGACCTTGCTTCGCT+AGG | 0.520004 | 4.1:+38223608 | MS.gene08578:CDS |
CTTCGCTAGGAGGTTGTGAT+GGG | 0.524927 | 4.1:+38223621 | MS.gene08578:CDS |
GAATGTGTGCAGCTTGGTGA+AGG | 0.530466 | 4.1:+38226833 | MS.gene08578:intron |
TAGCTCGGCACCTTTGTCCT+CGG | 0.531347 | 4.1:+38220930 | MS.gene08578:CDS |
AATCACAATTGGTCAAGCAC+GGG | 0.546782 | 4.1:-38226892 | None:intergenic |
TTCAGCACTGATTTGCTCTG+GGG | 0.551309 | 4.1:-38223648 | None:intergenic |
ATAATGCTTTAGAGTTTCGA+AGG | 0.554123 | 4.1:+38224969 | MS.gene08578:CDS |
CTGCCTCCTTAATATCATGC+AGG | 0.564666 | 4.1:-38222116 | None:intergenic |
AGGAGGCAGAGGAACACTAT+CGG | 0.566175 | 4.1:+38222130 | MS.gene08578:CDS |
CTTGGTGAAGGGAGGGAACA+GGG | 0.567012 | 4.1:+38226845 | MS.gene08578:CDS |
TGAAAATTTCATGAAAACAA+AGG | 0.569118 | 4.1:+38222092 | MS.gene08578:CDS |
GGAGGCCCCATTTAGAGCAA+TGG | 0.569434 | 4.1:+38226078 | MS.gene08578:CDS |
GCATGATATTAAGGAGGCAG+AGG | 0.571752 | 4.1:+38222119 | MS.gene08578:CDS |
AAAGTCTAAATCATACACTT+AGG | 0.572201 | 4.1:+38223675 | MS.gene08578:CDS |
AAATCACAATTGGTCAAGCA+CGG | 0.573228 | 4.1:-38226893 | None:intergenic |
CAGGGTTAAGAAGATGCAAA+TGG | 0.576301 | 4.1:+38226863 | MS.gene08578:CDS |
GGGCCTCCGTCATTTCATGA+AGG | 0.578750 | 4.1:-38226063 | None:intergenic |
CAGAGGAGGCATGAAGCAGA+GGG | 0.582349 | 4.1:+38221750 | MS.gene08578:CDS |
GATGACCTTGCTTCGCTAGG+AGG | 0.590407 | 4.1:+38223611 | MS.gene08578:CDS |
CGGGGTGATCAATATCCACT+GGG | 0.591640 | 4.1:-38226390 | None:intergenic |
ACAGAGCTGTTCGAGACACA+AGG | 0.591749 | 4.1:+38225405 | MS.gene08578:CDS |
GCAGAGGAGGCATGAAGCAG+AGG | 0.592152 | 4.1:+38221749 | MS.gene08578:CDS |
GGAAACGACCTTATCGATTG+AGG | 0.596487 | 4.1:+38225194 | MS.gene08578:CDS |
CACAACCTCCTAGCGAAGCA+AGG | 0.608263 | 4.1:-38223616 | None:intergenic |
GGCCTCCGTCATTTCATGAA+GGG | 0.610350 | 4.1:-38226062 | None:intergenic |
ATTAGCCCTTCATGAAATGA+CGG | 0.611197 | 4.1:+38226057 | MS.gene08578:CDS |
TTCAGTCTCAGATTTCTCAA+GGG | 0.612220 | 4.1:-38221944 | None:intergenic |
GCTCTGTTTGATGTATCTTG+GGG | 0.619473 | 4.1:-38225389 | None:intergenic |
TGTTAGAACGCCTTGAGCAG+AGG | 0.622007 | 4.1:+38221733 | MS.gene08578:CDS |
TAGAACGCCTTGAGCAGAGG+AGG | 0.631658 | 4.1:+38221736 | MS.gene08578:CDS |
TTCATCCATTGCTCTAAATG+GGG | 0.635651 | 4.1:-38226083 | None:intergenic |
AATGTGTGCAGCTTGGTGAA+GGG | 0.638597 | 4.1:+38226834 | MS.gene08578:intron |
ATCACAATTGGTCAAGCACG+GGG | 0.646023 | 4.1:-38226891 | None:intergenic |
GTGTGCAGCTTGGTGAAGGG+AGG | 0.647999 | 4.1:+38226837 | MS.gene08578:intron |
AAGACAAATAGATGCAGTGA+CGG | 0.648122 | 4.1:+38221981 | MS.gene08578:CDS |
ATCTCATCAACCGAGGACAA+AGG | 0.656840 | 4.1:-38220940 | None:intergenic |
TTCAACAATCTCATCAACCG+AGG | 0.657847 | 4.1:-38220947 | None:intergenic |
ACAAGCGACTGAAAGTAGCT+CGG | 0.665798 | 4.1:+38220915 | MS.gene08578:CDS |
ACAAATAGATGCAGTGACGG+AGG | 0.666229 | 4.1:+38221984 | MS.gene08578:CDS |
GTAAAATTTGACAAACTGTG+TGG | 0.668627 | 4.1:+38221792 | MS.gene08578:CDS |
CAGAGCTGTTCGAGACACAA+GGG | 0.669316 | 4.1:+38225406 | MS.gene08578:CDS |
TGTGCAGCTTGGTGAAGGGA+GGG | 0.670551 | 4.1:+38226838 | MS.gene08578:intron |
AGAGCTGTTCGAGACACAAG+GGG | 0.683582 | 4.1:+38225407 | MS.gene08578:CDS |
GGTCCTGCATGATATTAAGG+AGG | 0.685132 | 4.1:+38222113 | MS.gene08578:CDS |
CTGAGGCACAAGGATCCCAG+TGG | 0.705015 | 4.1:+38226375 | MS.gene08578:CDS |
AGCCCTTCATGAAATGACGG+AGG | 0.719050 | 4.1:+38226060 | MS.gene08578:CDS |
AATATACCTAGTATCATTCG+GGG | 0.733090 | 4.1:-38226408 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAATATATTAATTCTTGT+TGG | + | chr4.1:38224195-38224214 | MS.gene08578:intron | 10.0% |
!! | AATAATTAATAATTCCAAAT+GGG | - | chr4.1:38224302-38224321 | None:intergenic | 10.0% |
!! | CACATAAAAAAATAAAAAAT+AGG | - | chr4.1:38224592-38224611 | None:intergenic | 10.0% |
!! | TAACTTTATTAAAAAATTAC+AGG | + | chr4.1:38222056-38222075 | MS.gene08578:intron | 10.0% |
!! | TAATAATTAATAATTCCAAA+TGG | - | chr4.1:38224303-38224322 | None:intergenic | 10.0% |
!! | TTTATTGTATGTATAAATAA+TGG | - | chr4.1:38225472-38225491 | None:intergenic | 10.0% |
!!! | TAAATTGAGTTTAAAATAAT+AGG | + | chr4.1:38221264-38221283 | MS.gene08578:intron | 10.0% |
!! | AAATAAAATTGATGTGTTAT+GGG | + | chr4.1:38223483-38223502 | MS.gene08578:intron | 15.0% |
!! | GTTATATGATAAATAAACAA+AGG | - | chr4.1:38221235-38221254 | None:intergenic | 15.0% |
!! | TAAACTCAATTTAACAAAAT+TGG | - | chr4.1:38221257-38221276 | None:intergenic | 15.0% |
!! | TAAATAAAATTGATGTGTTA+TGG | + | chr4.1:38223482-38223501 | MS.gene08578:intron | 15.0% |
!! | TATTTATGACATATTTGATT+TGG | - | chr4.1:38222451-38222470 | None:intergenic | 15.0% |
!! | TCTTTAAACTATTCAAATAA+TGG | + | chr4.1:38222792-38222811 | MS.gene08578:intron | 15.0% |
!! | TGTAAAATGACATATAATTT+GGG | + | chr4.1:38223111-38223130 | MS.gene08578:intron | 15.0% |
!! | TTGTAAAATGACATATAATT+TGG | + | chr4.1:38223110-38223129 | MS.gene08578:intron | 15.0% |
!! | TTTATATTAGTCATCTAAAT+TGG | + | chr4.1:38222185-38222204 | MS.gene08578:intron | 15.0% |
!!! | ACACATCAATTTTATTTAAA+AGG | - | chr4.1:38223480-38223499 | None:intergenic | 15.0% |
!!! | ATAATATATGGATTAAACTT+TGG | - | chr4.1:38221663-38221682 | None:intergenic | 15.0% |
!!! | TAATATATGGATTAAACTTT+GGG | - | chr4.1:38221662-38221681 | None:intergenic | 15.0% |
!!! | TGAGTTTTAATTTATTTTTC+TGG | + | chr4.1:38225798-38225817 | MS.gene08578:intron | 15.0% |
!!! | TTAAAATAAGTAAACGTTTT+AGG | - | chr4.1:38225340-38225359 | None:intergenic | 15.0% |
!!! | TTATCATTAATCTCTTTTTA+TGG | + | chr4.1:38223978-38223997 | MS.gene08578:intron | 15.0% |
!!! | TTTTATTTAAAAGGAAAATC+TGG | - | chr4.1:38223471-38223490 | None:intergenic | 15.0% |
!! | AAAATATTGAAAGAACAACA+TGG | - | chr4.1:38224441-38224460 | None:intergenic | 20.0% |
!! | AAGAACGAAAGATTATAAAA+AGG | + | chr4.1:38223894-38223913 | MS.gene08578:CDS | 20.0% |
!! | AATTGAATGTATGTATTCTT+TGG | + | chr4.1:38223945-38223964 | MS.gene08578:intron | 20.0% |
!! | ACAAAAATATCCTTCATTAA+TGG | + | chr4.1:38222992-38223011 | MS.gene08578:intron | 20.0% |
!! | ACCAATTAATTACCATAAAA+AGG | - | chr4.1:38225283-38225302 | None:intergenic | 20.0% |
!! | ACTCTTATGTTTGATTAATT+TGG | + | chr4.1:38223397-38223416 | MS.gene08578:intron | 20.0% |
!! | AGATCAAGTAATAAATAGTA+AGG | + | chr4.1:38223049-38223068 | MS.gene08578:intron | 20.0% |
!! | AGGTAAATGAAAAGTAAAAA+AGG | - | chr4.1:38225263-38225282 | None:intergenic | 20.0% |
!! | AGGTTTAGAGAAAAAAAAAA+AGG | - | chr4.1:38225089-38225108 | None:intergenic | 20.0% |
!! | ATAGTTTATTTAGATTACAC+TGG | - | chr4.1:38226169-38226188 | None:intergenic | 20.0% |
!! | ATCAAGTAATAAATAGTAAG+GGG | + | chr4.1:38223051-38223070 | MS.gene08578:intron | 20.0% |
!! | ATTAATTCTTGTTGGATATT+TGG | + | chr4.1:38224203-38224222 | MS.gene08578:intron | 20.0% |
!! | CAAACAATAATTGTATCATA+TGG | + | chr4.1:38225538-38225557 | MS.gene08578:intron | 20.0% |
!! | CATTCAATTCGAATAATATA+TGG | - | chr4.1:38221675-38221694 | None:intergenic | 20.0% |
!! | GATCAAGTAATAAATAGTAA+GGG | + | chr4.1:38223050-38223069 | MS.gene08578:intron | 20.0% |
!! | GTGTACATTAACATTATTAT+GGG | - | chr4.1:38222507-38222526 | None:intergenic | 20.0% |
!! | TATAACAAGTAATATGTTGT+TGG | - | chr4.1:38221005-38221024 | None:intergenic | 20.0% |
!! | TGAAAATTTCATGAAAACAA+AGG | + | chr4.1:38222092-38222111 | MS.gene08578:CDS | 20.0% |
!! | TGCACATAAAAAAAAAAACT+GGG | + | chr4.1:38223302-38223321 | MS.gene08578:intron | 20.0% |
!! | TGTGTACATTAACATTATTA+TGG | - | chr4.1:38222508-38222527 | None:intergenic | 20.0% |
!! | TTGCACATAAAAAAAAAAAC+TGG | + | chr4.1:38223301-38223320 | MS.gene08578:intron | 20.0% |
!!! | AATTTGCTTCTTTTGTTTAT+AGG | + | chr4.1:38225358-38225377 | MS.gene08578:intron | 20.0% |
!!! | ACCTTTTTATGGTAATTAAT+TGG | + | chr4.1:38225279-38225298 | MS.gene08578:intron | 20.0% |
!!! | ACTTTTCATTTACCTTTTTA+TGG | + | chr4.1:38225268-38225287 | MS.gene08578:intron | 20.0% |
!!! | ATCATGCTTTTCATTATTTT+TGG | + | chr4.1:38223814-38223833 | MS.gene08578:intron | 20.0% |
!!! | ATTTTATTATTGAAGTGACA+TGG | + | chr4.1:38226731-38226750 | MS.gene08578:intron | 20.0% |
!!! | GGTTAATTTATAAAGTACTA+CGG | + | chr4.1:38221376-38221395 | MS.gene08578:intron | 20.0% |
!!! | GTGATTTTATTGTTTATTGA+AGG | + | chr4.1:38224940-38224959 | MS.gene08578:intron | 20.0% |
!!! | GTTAATTTATAAAGTACTAC+GGG | + | chr4.1:38221377-38221396 | MS.gene08578:intron | 20.0% |
!!! | TTTTATGTGTTATTGTAGTA+AGG | + | chr4.1:38224603-38224622 | MS.gene08578:intron | 20.0% |
!!! | TTTTTTTTTTTCTCTAAACC+TGG | + | chr4.1:38225088-38225107 | MS.gene08578:intron | 20.0% |
! | AAAGTCTAAATCATACACTT+AGG | + | chr4.1:38223675-38223694 | MS.gene08578:CDS | 25.0% |
! | AACCTACTTAAGTATAATAC+AGG | - | chr4.1:38226506-38226525 | None:intergenic | 25.0% |
! | AAGGAAATAAGAAAAAGTAG+AGG | + | chr4.1:38221171-38221190 | MS.gene08578:intron | 25.0% |
! | AATATCCTTCATTAATGGTA+TGG | + | chr4.1:38222997-38223016 | MS.gene08578:intron | 25.0% |
! | AATTTGATGTCTTTATGGTA+TGG | + | chr4.1:38226104-38226123 | MS.gene08578:intron | 25.0% |
! | AGAATCACTAACTAAGTTTA+TGG | - | chr4.1:38222775-38222794 | None:intergenic | 25.0% |
! | AGAGCACATAGAATTAATTT+AGG | + | chr4.1:38225653-38225672 | MS.gene08578:intron | 25.0% |
! | AGGTGGTTAATAAGTTTAAT+TGG | + | chr4.1:38222656-38222675 | MS.gene08578:intron | 25.0% |
! | ATACAACATTAATGTAGAAG+TGG | - | chr4.1:38222947-38222966 | None:intergenic | 25.0% |
! | ATGGACATTATTATTTGTTC+TGG | + | chr4.1:38226441-38226460 | MS.gene08578:intron | 25.0% |
! | CATGGAAAACATAAAAGAAT+TGG | + | chr4.1:38223022-38223041 | MS.gene08578:intron | 25.0% |
! | GCTAGAATGACATATAATTT+GGG | + | chr4.1:38223147-38223166 | MS.gene08578:intron | 25.0% |
! | GTAAAAAAGGAAACTGAAAA+TGG | - | chr4.1:38225250-38225269 | None:intergenic | 25.0% |
! | GTGACTTATTACATTACAAT+TGG | + | chr4.1:38223233-38223252 | MS.gene08578:intron | 25.0% |
! | TAATTGACTACTATGTAACT+GGG | + | chr4.1:38226294-38226313 | MS.gene08578:intron | 25.0% |
! | TACTATATCTTTAATGCCTA+AGG | - | chr4.1:38223515-38223534 | None:intergenic | 25.0% |
! | TAGCAACAAAAATATGTGAA+AGG | - | chr4.1:38225053-38225072 | None:intergenic | 25.0% |
! | TAGGATCATAATCATAGATT+GGG | + | chr4.1:38224813-38224832 | MS.gene08578:intron | 25.0% |
! | TATTAAAAAATTACAGGCGA+AGG | + | chr4.1:38222062-38222081 | MS.gene08578:intron | 25.0% |
! | TATTATTCGAATTGAATGCT+AGG | + | chr4.1:38221677-38221696 | MS.gene08578:intron | 25.0% |
! | TGCTAGAATGACATATAATT+TGG | + | chr4.1:38223146-38223165 | MS.gene08578:intron | 25.0% |
! | TGTTATTGTAGTAAGGTAAT+TGG | + | chr4.1:38224610-38224629 | MS.gene08578:intron | 25.0% |
! | TGTTGCACATAAAAAAAACT+GGG | + | chr4.1:38223337-38223356 | MS.gene08578:intron | 25.0% |
! | TTAATTGACTACTATGTAAC+TGG | + | chr4.1:38226293-38226312 | MS.gene08578:intron | 25.0% |
! | TTACACTGGTAAAATACTAA+TGG | - | chr4.1:38226155-38226174 | None:intergenic | 25.0% |
! | TTAGGATCATAATCATAGAT+TGG | + | chr4.1:38224812-38224831 | MS.gene08578:intron | 25.0% |
! | TTATTCTTGCCTTATACTTT+CGG | + | chr4.1:38221534-38221553 | MS.gene08578:intron | 25.0% |
! | TTGTGATATAACGTGAATAA+TGG | + | chr4.1:38222736-38222755 | MS.gene08578:intron | 25.0% |
! | TTGTTGCACATAAAAAAAAC+TGG | + | chr4.1:38223336-38223355 | MS.gene08578:intron | 25.0% |
!! | AACTAATTCTAAAGATTACG+AGG | + | chr4.1:38225613-38225632 | MS.gene08578:intron | 25.0% |
!! | AATAGGAATGTAGACTTTTA+TGG | + | chr4.1:38224676-38224695 | MS.gene08578:intron | 25.0% |
!! | ACTTATCAAAGTTGATTATG+AGG | + | chr4.1:38225173-38225192 | MS.gene08578:CDS | 25.0% |
!! | CAATTCTTTTATGTTTTCCA+TGG | - | chr4.1:38223024-38223043 | None:intergenic | 25.0% |
!! | CTCTTTTTATGGATATTGTT+CGG | + | chr4.1:38223989-38224008 | MS.gene08578:intron | 25.0% |
!! | TACAAATTCAACACATTTTG+AGG | + | chr4.1:38224918-38224937 | MS.gene08578:intron | 25.0% |
!!! | ACTTGTGATATTTTTAAGTG+GGG | - | chr4.1:38222396-38222415 | None:intergenic | 25.0% |
!!! | AGGTATATTGGTTTCAAATA+TGG | + | chr4.1:38226422-38226441 | MS.gene08578:intron | 25.0% |
!!! | ATATCAGACATTACTTTTCT+TGG | - | chr4.1:38226556-38226575 | None:intergenic | 25.0% |
!!! | CTTAGTAAGTTTTATCTTGA+GGG | + | chr4.1:38224760-38224779 | MS.gene08578:intron | 25.0% |
!!! | GACTTGTGATATTTTTAAGT+GGG | - | chr4.1:38222397-38222416 | None:intergenic | 25.0% |
!!! | TAGGCAACAATTATGTTTTT+TGG | + | chr4.1:38223200-38223219 | MS.gene08578:intron | 25.0% |
!!! | TGACTTGTGATATTTTTAAG+TGG | - | chr4.1:38222398-38222417 | None:intergenic | 25.0% |
!!! | TTAAAGTTTTTTCACTCAGT+TGG | + | chr4.1:38224166-38224185 | MS.gene08578:intron | 25.0% |
!!! | TTACTAGCACATTTTGTTTT+TGG | + | chr4.1:38222620-38222639 | MS.gene08578:intron | 25.0% |
!!! | TTAGTAAGTTTTATCTTGAG+GGG | + | chr4.1:38224761-38224780 | MS.gene08578:intron | 25.0% |
!!! | TTATTCGCTTTTATGTAAGT+TGG | - | chr4.1:38222567-38222586 | None:intergenic | 25.0% |
!!! | TTTTTTTATGTGCAACAATG+AGG | - | chr4.1:38223296-38223315 | None:intergenic | 25.0% |
AAAAGTCGAAGTTATAAAGC+AGG | + | chr4.1:38221426-38221445 | MS.gene08578:intron | 30.0% | |
AAGGAGGCAATATACTTTAA+GGG | + | chr4.1:38222838-38222857 | MS.gene08578:intron | 30.0% | |
AATAATAGGATCGTTCAGTA+TGG | + | chr4.1:38221278-38221297 | MS.gene08578:intron | 30.0% | |
AATATACCTAGTATCATTCG+GGG | - | chr4.1:38226411-38226430 | None:intergenic | 30.0% | |
ACTGCAGGATAATGTTAAAA+AGG | + | chr4.1:38223568-38223587 | MS.gene08578:intron | 30.0% | |
AGTAAGCAGAAAAATTAGCA+TGG | + | chr4.1:38226334-38226353 | MS.gene08578:CDS | 30.0% | |
ATAAATCAAATTGCACCTCA+CGG | - | chr4.1:38222170-38222189 | None:intergenic | 30.0% | |
ATAATAGGATCGTTCAGTAT+GGG | + | chr4.1:38221279-38221298 | MS.gene08578:intron | 30.0% | |
ATAATTGTTGCCTAAGATTC+GGG | - | chr4.1:38223194-38223213 | None:intergenic | 30.0% | |
ATACATATTGAACAGCAAAG+TGG | + | chr4.1:38226776-38226795 | MS.gene08578:intron | 30.0% | |
ATACATTCAATTTCTGTCGA+AGG | - | chr4.1:38223937-38223956 | None:intergenic | 30.0% | |
ATCCTCATGATCAGATTTAA+TGG | + | chr4.1:38225123-38225142 | MS.gene08578:intron | 30.0% | |
CAATATACCTAGTATCATTC+GGG | - | chr4.1:38226412-38226431 | None:intergenic | 30.0% | |
CATAATTGTTGCCTAAGATT+CGG | - | chr4.1:38223195-38223214 | None:intergenic | 30.0% | |
CCAAACAAAACTACTTGATT+TGG | + | chr4.1:38226612-38226631 | MS.gene08578:intron | 30.0% | |
CCAATATACCTAGTATCATT+CGG | - | chr4.1:38226413-38226432 | None:intergenic | 30.0% | |
CCTCAAGATAAAACTTACTA+AGG | - | chr4.1:38224762-38224781 | None:intergenic | 30.0% | |
CCTTAGATCATCAATTGATT+CGG | - | chr4.1:38223858-38223877 | None:intergenic | 30.0% | |
GGATGAATTTGATGTCTTTA+TGG | + | chr4.1:38226099-38226118 | MS.gene08578:CDS | 30.0% | |
GTAAAATTTGACAAACTGTG+TGG | + | chr4.1:38221792-38221811 | MS.gene08578:CDS | 30.0% | |
GTTATATCACAATGCAAAGA+GGG | - | chr4.1:38222728-38222747 | None:intergenic | 30.0% | |
TAATTCCTTAGCCAGAATTA+GGG | + | chr4.1:38222885-38222904 | MS.gene08578:intron | 30.0% | |
TACATTCAATTTCTGTCGAA+GGG | - | chr4.1:38223936-38223955 | None:intergenic | 30.0% | |
TATGGAATTCAACTCTTAGT+AGG | + | chr4.1:38221118-38221137 | MS.gene08578:intron | 30.0% | |
TATTCTGCTTGTTTGTTTGA+GGG | + | chr4.1:38221077-38221096 | MS.gene08578:intron | 30.0% | |
TGCCTGTATTATACTTAAGT+AGG | + | chr4.1:38226501-38226520 | MS.gene08578:intron | 30.0% | |
TGTTGTGTGTGCATTTAATT+AGG | + | chr4.1:38226001-38226020 | MS.gene08578:intron | 30.0% | |
TTAATTCCTTAGCCAGAATT+AGG | + | chr4.1:38222884-38222903 | MS.gene08578:intron | 30.0% | |
TTTGCCTACAACAAAAAAAG+TGG | - | chr4.1:38222229-38222248 | None:intergenic | 30.0% | |
! | AAGTGGGGCTTAATTTTTAA+TGG | - | chr4.1:38222381-38222400 | None:intergenic | 30.0% |
! | AATTCATCCATTGCTCTAAA+TGG | - | chr4.1:38226088-38226107 | None:intergenic | 30.0% |
! | ATGCTAATTTTTCTGCTTAC+TGG | - | chr4.1:38226335-38226354 | None:intergenic | 30.0% |
! | ATTCATCCATTGCTCTAAAT+GGG | - | chr4.1:38226087-38226106 | None:intergenic | 30.0% |
! | TAAATAGTAAGGGGCATAAT+AGG | + | chr4.1:38223060-38223079 | MS.gene08578:intron | 30.0% |
! | TAAGCATCTAGTTTACACTT+TGG | + | chr4.1:38226252-38226271 | MS.gene08578:intron | 30.0% |
! | TAATTCTGGCTAAGGAATTA+AGG | - | chr4.1:38222885-38222904 | None:intergenic | 30.0% |
! | TCCCAAAAACTTATGCTTTT+GGG | - | chr4.1:38224038-38224057 | None:intergenic | 30.0% |
! | TCGCAGATTCTACATTTTTA+GGG | - | chr4.1:38221909-38221928 | None:intergenic | 30.0% |
! | TTCCCAAAAACTTATGCTTT+TGG | - | chr4.1:38224039-38224058 | None:intergenic | 30.0% |
! | TTCGCAGATTCTACATTTTT+AGG | - | chr4.1:38221910-38221929 | None:intergenic | 30.0% |
! | TTCTACTTGCTGAGAATATT+AGG | - | chr4.1:38224251-38224270 | None:intergenic | 30.0% |
!! | ACTGTTTGTGAGTTGAATTT+TGG | - | chr4.1:38224545-38224564 | None:intergenic | 30.0% |
!! | ATAATGCTTTAGAGTTTCGA+AGG | + | chr4.1:38224969-38224988 | MS.gene08578:CDS | 30.0% |
!! | CCTTAGTAAGTTTTATCTTG+AGG | + | chr4.1:38224759-38224778 | MS.gene08578:intron | 30.0% |
!! | TAGTAAGTTTTATCTTGAGG+GGG | + | chr4.1:38224762-38224781 | MS.gene08578:intron | 30.0% |
!! | TCCCAAAAGCATAAGTTTTT+GGG | + | chr4.1:38224034-38224053 | MS.gene08578:intron | 30.0% |
!! | TTCGAAACTCTAAAGCATTA+TGG | - | chr4.1:38224970-38224989 | None:intergenic | 30.0% |
!! | TTGTTGCAAAATGATGGATA+TGG | + | chr4.1:38225444-38225463 | MS.gene08578:intron | 30.0% |
!! | TTTGTGAGTTGAATTTTGGA+GGG | - | chr4.1:38224541-38224560 | None:intergenic | 30.0% |
!!! | AAAGTACTACGGGTTTTAAA+CGG | + | chr4.1:38221387-38221406 | MS.gene08578:intron | 30.0% |
!!! | AACTTCGACTTTTTTCACAA+CGG | - | chr4.1:38221419-38221438 | None:intergenic | 30.0% |
!!! | ATTGCCACTTTTTTTGTTGT+AGG | + | chr4.1:38222222-38222241 | MS.gene08578:intron | 30.0% |
!!! | CCAAATCAAGTAGTTTTGTT+TGG | - | chr4.1:38226615-38226634 | None:intergenic | 30.0% |
!!! | GCAGTTTTATTAACAACTGA+AGG | + | chr4.1:38221026-38221045 | MS.gene08578:intron | 30.0% |
!!! | GGTTTCTTGCATTATTTTTG+AGG | + | chr4.1:38222859-38222878 | MS.gene08578:intron | 30.0% |
!!! | TAGTAAACGACATCGTTTTT+TGG | - | chr4.1:38222606-38222625 | None:intergenic | 30.0% |
!!! | TTTCATTTGTCCTAGTTTTG+TGG | + | chr4.1:38225833-38225852 | MS.gene08578:intron | 30.0% |
AAAGGTCCTGCATGATATTA+AGG | + | chr4.1:38222110-38222129 | MS.gene08578:CDS | 35.0% | |
AACAGAACACACTATGCATT+AGG | - | chr4.1:38221634-38221653 | None:intergenic | 35.0% | |
AACAGTCAAACACACTCTAA+AGG | + | chr4.1:38224559-38224578 | MS.gene08578:intron | 35.0% | |
AAGAACCAGAAAAGCAAACA+AGG | + | chr4.1:38226529-38226548 | MS.gene08578:intron | 35.0% | |
AAGACAAATAGATGCAGTGA+CGG | + | chr4.1:38221981-38222000 | MS.gene08578:CDS | 35.0% | |
AATCTTATACCTTTCGAGCA+TGG | + | chr4.1:38225902-38225921 | MS.gene08578:intron | 35.0% | |
AATGAATTTGAATGCCCTGA+GGG | - | chr4.1:38223280-38223299 | None:intergenic | 35.0% | |
ACAGAACACACTATGCATTA+GGG | - | chr4.1:38221633-38221652 | None:intergenic | 35.0% | |
AGAACCAGAAAAGCAAACAA+GGG | + | chr4.1:38226530-38226549 | MS.gene08578:intron | 35.0% | |
AGCCATTCAACTTCAGATTA+AGG | - | chr4.1:38224093-38224112 | None:intergenic | 35.0% | |
AGCTCTGTTTGATGTATCTT+GGG | - | chr4.1:38225393-38225412 | None:intergenic | 35.0% | |
AGTGGATGTATTTGATCTGA+TGG | - | chr4.1:38222929-38222948 | None:intergenic | 35.0% | |
ATAAGTGTAGTGATCACTAG+AGG | - | chr4.1:38225951-38225970 | None:intergenic | 35.0% | |
ATATTTAGACCCCGAATCTT+AGG | + | chr4.1:38223181-38223200 | MS.gene08578:intron | 35.0% | |
ATCAGACTGCACAAGAATAA+AGG | - | chr4.1:38222013-38222032 | None:intergenic | 35.0% | |
ATCTAATACAGAGCTTCAAG+CGG | - | chr4.1:38224117-38224136 | None:intergenic | 35.0% | |
ATCTTATACCTTTCGAGCAT+GGG | + | chr4.1:38225903-38225922 | MS.gene08578:intron | 35.0% | |
ATGGTCCATACCATTAATGA+AGG | - | chr4.1:38223005-38223024 | None:intergenic | 35.0% | |
ATTAGCCCTTCATGAAATGA+CGG | + | chr4.1:38226057-38226076 | MS.gene08578:CDS | 35.0% | |
ATTATCCTGCAGTTTCAACA+AGG | - | chr4.1:38223561-38223580 | None:intergenic | 35.0% | |
ATTTAGCTAGCAATCTCATG+AGG | + | chr4.1:38226705-38226724 | MS.gene08578:intron | 35.0% | |
ATTTGACAAACTGTGTGGTA+TGG | + | chr4.1:38221797-38221816 | MS.gene08578:intron | 35.0% | |
CAAAGTAATCAAAACCACAC+CGG | - | chr4.1:38222696-38222715 | None:intergenic | 35.0% | |
CCGAATGATACTAGGTATAT+TGG | + | chr4.1:38226410-38226429 | MS.gene08578:intron | 35.0% | |
CGTTATATCACAATGCAAAG+AGG | - | chr4.1:38222729-38222748 | None:intergenic | 35.0% | |
GAAGGAGGCAATATACTTTA+AGG | + | chr4.1:38222837-38222856 | MS.gene08578:intron | 35.0% | |
GAGTACTTGTATAGCAGTAT+TGG | - | chr4.1:38222485-38222504 | None:intergenic | 35.0% | |
GCAAAAAATGAAAGAAGAGC+AGG | + | chr4.1:38221707-38221726 | MS.gene08578:CDS | 35.0% | |
GCCATTCAACTTCAGATTAA+GGG | - | chr4.1:38224092-38224111 | None:intergenic | 35.0% | |
GTATTCTGCTTGTTTGTTTG+AGG | + | chr4.1:38221076-38221095 | MS.gene08578:intron | 35.0% | |
GTTGAAGCATGTGAAAATCT+TGG | + | chr4.1:38221355-38221374 | MS.gene08578:intron | 35.0% | |
GTTTGAACTATGTTCCCATT+TGG | + | chr4.1:38224285-38224304 | MS.gene08578:intron | 35.0% | |
TAATTGTTGCCTAAGATTCG+GGG | - | chr4.1:38223193-38223212 | None:intergenic | 35.0% | |
TATTAATGCCTCACCCATAA+GGG | + | chr4.1:38224318-38224337 | MS.gene08578:intron | 35.0% | |
TGACTCTTGCATTTCATTTC+AGG | + | chr4.1:38225307-38225326 | MS.gene08578:intron | 35.0% | |
TGGAACAACTGTACAATACA+GGG | + | chr4.1:38225586-38225605 | MS.gene08578:intron | 35.0% | |
TGTGTGTGCATTTAATTAGG+CGG | + | chr4.1:38226004-38226023 | MS.gene08578:intron | 35.0% | |
TTATTAATGCCTCACCCATA+AGG | + | chr4.1:38224317-38224336 | MS.gene08578:intron | 35.0% | |
TTCAGATTAAGGGAAGACAA+TGG | - | chr4.1:38224082-38224101 | None:intergenic | 35.0% | |
TTCAGTCTCAGATTTCTCAA+GGG | - | chr4.1:38221947-38221966 | None:intergenic | 35.0% | |
TTCATTAATGGTATGGACCA+TGG | + | chr4.1:38223004-38223023 | MS.gene08578:intron | 35.0% | |
TTGCTTCATGAGGATAGAAT+AGG | + | chr4.1:38224659-38224678 | MS.gene08578:intron | 35.0% | |
TTTGGGAACGTTCGTTATAT+GGG | + | chr4.1:38224051-38224070 | MS.gene08578:intron | 35.0% | |
! | ACCATGTTTCCGAAAGTATA+AGG | - | chr4.1:38221546-38221565 | None:intergenic | 35.0% |
! | ACGCTTGCTTTAGACAAAAT+TGG | - | chr4.1:38221498-38221517 | None:intergenic | 35.0% |
! | CCGAATCAATTGATGATCTA+AGG | + | chr4.1:38223855-38223874 | MS.gene08578:CDS | 35.0% |
! | GAAAAAGTAGAGGAGCATAA+AGG | + | chr4.1:38221181-38221200 | MS.gene08578:intron | 35.0% |
! | GAGGATATTTAAAGTAGTCC+AGG | - | chr4.1:38225109-38225128 | None:intergenic | 35.0% |
! | GTTCGTTTGTTGCAAAATGA+TGG | + | chr4.1:38225438-38225457 | MS.gene08578:intron | 35.0% |
! | TACTTGTATAGCAGTATTGG+CGG | - | chr4.1:38222482-38222501 | None:intergenic | 35.0% |
! | TCACTTGTTCTTCCATTTTG+AGG | + | chr4.1:38224636-38224655 | MS.gene08578:intron | 35.0% |
! | TCCCTTAATCTGAAGTTGAA+TGG | + | chr4.1:38224088-38224107 | MS.gene08578:intron | 35.0% |
! | TGACATATAATTTGGGACTG+AGG | + | chr4.1:38223154-38223173 | MS.gene08578:intron | 35.0% |
! | TGTAGCTTTTGAATAAGACG+TGG | + | chr4.1:38225566-38225585 | MS.gene08578:intron | 35.0% |
! | TTCATCCATTGCTCTAAATG+GGG | - | chr4.1:38226086-38226105 | None:intergenic | 35.0% |
!! | AAACTTATGCTTTTGGGAGA+AGG | - | chr4.1:38224032-38224051 | None:intergenic | 35.0% |
!! | AACTTATGCTTTTGGGAGAA+GGG | - | chr4.1:38224031-38224050 | None:intergenic | 35.0% |
!! | AGTAAGTTTTATCTTGAGGG+GGG | + | chr4.1:38224763-38224782 | MS.gene08578:intron | 35.0% |
!! | ATAAGGCTTGTTGATGTTGT+TGG | + | chr4.1:38221598-38221617 | MS.gene08578:intron | 35.0% |
!! | CTCCCAAAAGCATAAGTTTT+TGG | + | chr4.1:38224033-38224052 | MS.gene08578:intron | 35.0% |
!! | GATTTAATGGCCTTTTGAAG+AGG | + | chr4.1:38225136-38225155 | MS.gene08578:intron | 35.0% |
!! | GTTTGTGAGTTGAATTTTGG+AGG | - | chr4.1:38224542-38224561 | None:intergenic | 35.0% |
!! | TGAATTTTGGAGGGTTTTAG+AGG | - | chr4.1:38224532-38224551 | None:intergenic | 35.0% |
!! | TTTTGGGAACGTTCGTTATA+TGG | + | chr4.1:38224050-38224069 | MS.gene08578:intron | 35.0% |
!!! | GAATTTTGGAGGGTTTTAGA+GGG | - | chr4.1:38224531-38224550 | None:intergenic | 35.0% |
!!! | GACATCGTTTTTTGGCATAT+AGG | - | chr4.1:38222598-38222617 | None:intergenic | 35.0% |
!!! | GTGTGTTTTGTTTGCTCATT+TGG | + | chr4.1:38226190-38226209 | MS.gene08578:intron | 35.0% |
!!! | TATTTTTGGTTTCCCTCTGT+AGG | + | chr4.1:38223828-38223847 | MS.gene08578:intron | 35.0% |
!!! | TCGCTTTTATGTAAGTTGGT+AGG | - | chr4.1:38222563-38222582 | None:intergenic | 35.0% |
!!! | TTTTTTCACTCAGTTGGTTC+AGG | + | chr4.1:38224172-38224191 | MS.gene08578:intron | 35.0% |
AATACAGGCACCACTTAACA+AGG | - | chr4.1:38226491-38226510 | None:intergenic | 40.0% | |
ACTAACCTTGTTGAAACTGC+AGG | + | chr4.1:38223553-38223572 | MS.gene08578:intron | 40.0% | |
ACTTACTAAGGTAGCTCAAC+TGG | - | chr4.1:38224750-38224769 | None:intergenic | 40.0% | |
ATCTCAAGCATCAGCTTTCT+TGG | + | chr4.1:38225017-38225036 | MS.gene08578:CDS | 40.0% | |
ATGAATTTGAATGCCCTGAG+GGG | - | chr4.1:38223279-38223298 | None:intergenic | 40.0% | |
ATTGGACCGTTCAAATTCAC+CGG | + | chr4.1:38222674-38222693 | MS.gene08578:intron | 40.0% | |
ATTTGATCTGATGGCCGTTA+AGG | - | chr4.1:38222920-38222939 | None:intergenic | 40.0% | |
CAATGAATTTGAATGCCCTG+AGG | - | chr4.1:38223281-38223300 | None:intergenic | 40.0% | |
CACACACACACATATAGACT+TGG | + | chr4.1:38224490-38224509 | MS.gene08578:intron | 40.0% | |
CAGCTCTGTTTGATGTATCT+TGG | - | chr4.1:38225394-38225413 | None:intergenic | 40.0% | |
CAGGGTTAAGAAGATGCAAA+TGG | + | chr4.1:38226863-38226882 | MS.gene08578:CDS | 40.0% | |
CTCATGAAGCAACCTCAAAA+TGG | - | chr4.1:38224651-38224670 | None:intergenic | 40.0% | |
GCAAGATGAACTGTCAATTG+AGG | - | chr4.1:38223369-38223388 | None:intergenic | 40.0% | |
GCCTTATACTTTCGGAAACA+TGG | + | chr4.1:38221542-38221561 | MS.gene08578:intron | 40.0% | |
GCGACCGCTACAATAATATT+GGG | + | chr4.1:38226463-38226482 | MS.gene08578:intron | 40.0% | |
GCTCTGTTTGATGTATCTTG+GGG | - | chr4.1:38225392-38225411 | None:intergenic | 40.0% | |
GGCACCCAATATTATTGTAG+CGG | - | chr4.1:38226470-38226489 | None:intergenic | 40.0% | |
GGCCATTAAATCTGATCATG+AGG | - | chr4.1:38225128-38225147 | None:intergenic | 40.0% | |
GTCATCCTGACAGCAAATTA+TGG | - | chr4.1:38223597-38223616 | None:intergenic | 40.0% | |
GTGGAACAACTGTACAATAC+AGG | + | chr4.1:38225585-38225604 | MS.gene08578:intron | 40.0% | |
GTGTGTGCATTTAATTAGGC+GGG | + | chr4.1:38226005-38226024 | MS.gene08578:intron | 40.0% | |
GTGTTATGGGATTACTCCTT+AGG | + | chr4.1:38223496-38223515 | MS.gene08578:intron | 40.0% | |
GTTCAGTCTCAGATTTCTCA+AGG | - | chr4.1:38221948-38221967 | None:intergenic | 40.0% | |
TGATCACTAGAGGTCTCTAA+TGG | - | chr4.1:38225941-38225960 | None:intergenic | 40.0% | |
TGTGTGCATTTAATTAGGCG+GGG | + | chr4.1:38226006-38226025 | MS.gene08578:intron | 40.0% | |
TTAACCACCTTACGTGAAAC+TGG | - | chr4.1:38222646-38222665 | None:intergenic | 40.0% | |
TTAATTCACCCATGCTCGAA+AGG | - | chr4.1:38225914-38225933 | None:intergenic | 40.0% | |
TTAGAGGGAAAGGATATGGA+GGG | - | chr4.1:38224516-38224535 | None:intergenic | 40.0% | |
TTCAACAATCTCATCAACCG+AGG | - | chr4.1:38220950-38220969 | None:intergenic | 40.0% | |
TTTAGAGGGAAAGGATATGG+AGG | - | chr4.1:38224517-38224536 | None:intergenic | 40.0% | |
! | AAGCCTTATCCCATTAAGTG+GGG | - | chr4.1:38221587-38221606 | None:intergenic | 40.0% |
! | ACAAGCCTTATCCCATTAAG+TGG | - | chr4.1:38221589-38221608 | None:intergenic | 40.0% |
! | ATATTGGGTGCCTTGTTAAG+TGG | + | chr4.1:38226478-38226497 | MS.gene08578:intron | 40.0% |
! | CAAGCCTTATCCCATTAAGT+GGG | - | chr4.1:38221588-38221607 | None:intergenic | 40.0% |
! | TAGCGAAGTACCACAAAACT+AGG | - | chr4.1:38225846-38225865 | None:intergenic | 40.0% |
! | TCCTCTTGTTTCAAAGCAGA+TGG | + | chr4.1:38225509-38225528 | MS.gene08578:intron | 40.0% |
! | TGATTCGGAATACCTACAGA+GGG | - | chr4.1:38223843-38223862 | None:intergenic | 40.0% |
!! | AATGGCCTTTTGAAGAGGAA+GGG | + | chr4.1:38225141-38225160 | MS.gene08578:CDS | 40.0% |
!! | ATTGATTTTGCTGAGGCACA+AGG | + | chr4.1:38226365-38226384 | MS.gene08578:CDS | 40.0% |
!! | ATTTCAGCACTGATTTGCTC+TGG | - | chr4.1:38223653-38223672 | None:intergenic | 40.0% |
!! | CACTCTGATTGATTTTGCTG+AGG | + | chr4.1:38226358-38226377 | MS.gene08578:CDS | 40.0% |
!! | TAATGGCCTTTTGAAGAGGA+AGG | + | chr4.1:38225140-38225159 | MS.gene08578:CDS | 40.0% |
!! | TCCATCTGCTTTGAAACAAG+AGG | - | chr4.1:38225513-38225532 | None:intergenic | 40.0% |
!! | TTGATTCGGAATACCTACAG+AGG | - | chr4.1:38223844-38223863 | None:intergenic | 40.0% |
!! | TTTCAGCACTGATTTGCTCT+GGG | - | chr4.1:38223652-38223671 | None:intergenic | 40.0% |
!! | TTTGCGAGTTGGTTTCTAGA+GGG | + | chr4.1:38224345-38224364 | MS.gene08578:intron | 40.0% |
!! | TTTTTGGCCAGTTTCACGTA+AGG | + | chr4.1:38222636-38222655 | MS.gene08578:intron | 40.0% |
!!! | CATTTTGAGGTTGCTTCATG+AGG | + | chr4.1:38224649-38224668 | MS.gene08578:intron | 40.0% |
!!! | CGGTGTGGTTTTGATTACTT+TGG | + | chr4.1:38222694-38222713 | MS.gene08578:intron | 40.0% |
!!! | GGTTTTAGAGGGAAAGGATA+TGG | - | chr4.1:38224520-38224539 | None:intergenic | 40.0% |
!!! | GTAGTTTTGTTTGGAAGTGC+AGG | - | chr4.1:38226606-38226625 | None:intergenic | 40.0% |
AACTCGCAAACACACCCTTA+TGG | - | chr4.1:38224335-38224354 | None:intergenic | 45.0% | |
AACTGCACCAGTTCAATGGT+CGG | - | chr4.1:38222263-38222282 | None:intergenic | 45.0% | |
ACAAATAGATGCAGTGACGG+AGG | + | chr4.1:38221984-38222003 | MS.gene08578:CDS | 45.0% | |
ACAAGCGACTGAAAGTAGCT+CGG | + | chr4.1:38220915-38220934 | MS.gene08578:CDS | 45.0% | |
ACCACACCGGTGAATTTGAA+CGG | - | chr4.1:38222683-38222702 | None:intergenic | 45.0% | |
ACTCGCAAACACACCCTTAT+GGG | - | chr4.1:38224334-38224353 | None:intergenic | 45.0% | |
ATCTCATCAACCGAGGACAA+AGG | - | chr4.1:38220943-38220962 | None:intergenic | 45.0% | |
CATTGAACTGGTGCAGTTCA+AGG | + | chr4.1:38222265-38222284 | MS.gene08578:intron | 45.0% | |
CTGCCTCCTTAATATCATGC+AGG | - | chr4.1:38222119-38222138 | None:intergenic | 45.0% | |
CTTGAACTGCACCAGTTCAA+TGG | - | chr4.1:38222267-38222286 | None:intergenic | 45.0% | |
CTTTCGGAAACATGGTAGAC+TGG | + | chr4.1:38221550-38221569 | MS.gene08578:intron | 45.0% | |
GCATGATATTAAGGAGGCAG+AGG | + | chr4.1:38222119-38222138 | MS.gene08578:CDS | 45.0% | |
GGCGACCGCTACAATAATAT+TGG | + | chr4.1:38226462-38226481 | MS.gene08578:intron | 45.0% | |
GGTCCTGCATGATATTAAGG+AGG | + | chr4.1:38222113-38222132 | MS.gene08578:CDS | 45.0% | |
GTGTGCTTGTGTCGTATTGA+AGG | + | chr4.1:38222819-38222838 | MS.gene08578:intron | 45.0% | |
GTGTTTGAATGTGTGCAGCT+TGG | + | chr4.1:38226827-38226846 | MS.gene08578:intron | 45.0% | |
TAGGGCTTCTGCTTCCTTAA+CGG | + | chr4.1:38222903-38222922 | MS.gene08578:intron | 45.0% | |
TCGTATATCTCATCCCCTCA+GGG | + | chr4.1:38223263-38223282 | MS.gene08578:intron | 45.0% | |
TGATCACCCCGAATGATACT+AGG | + | chr4.1:38226402-38226421 | MS.gene08578:CDS | 45.0% | |
TGCTTGTGTCGTATTGAAGG+AGG | + | chr4.1:38222822-38222841 | MS.gene08578:intron | 45.0% | |
TGTAACTGGGTTTGACATGC+AGG | + | chr4.1:38226307-38226326 | MS.gene08578:intron | 45.0% | |
! | AATGTGTGCAGCTTGGTGAA+GGG | + | chr4.1:38226834-38226853 | MS.gene08578:intron | 45.0% |
! | AGAAGCCCTAATTCTGGCTA+AGG | - | chr4.1:38222893-38222912 | None:intergenic | 45.0% |
! | ATAAGGGTGTGTTTGCGAGT+TGG | + | chr4.1:38224334-38224353 | MS.gene08578:intron | 45.0% |
! | CTTGTTTGTTTGAGGGTGTG+CGG | + | chr4.1:38221084-38221103 | MS.gene08578:intron | 45.0% |
! | GGCTTTGATGCGAAGTTGTT+TGG | - | chr4.1:38221214-38221233 | None:intergenic | 45.0% |
! | TGTTTGGAAGTGCAGGAGTT+TGG | - | chr4.1:38226599-38226618 | None:intergenic | 45.0% |
! | TTGTTTGTTTGAGGGTGTGC+GGG | + | chr4.1:38221085-38221104 | MS.gene08578:intron | 45.0% |
!! | ATGGCCTTTTGAAGAGGAAG+GGG | + | chr4.1:38225142-38225161 | MS.gene08578:CDS | 45.0% |
!! | GCTCAACTGGTTTGAGCTAA+TGG | - | chr4.1:38224737-38224756 | None:intergenic | 45.0% |
!! | GGCTTCCATAATTTGCTGTC+AGG | + | chr4.1:38223589-38223608 | MS.gene08578:CDS | 45.0% |
!! | GTTTGCGAGTTGGTTTCTAG+AGG | + | chr4.1:38224344-38224363 | MS.gene08578:intron | 45.0% |
!! | TTCAGCACTGATTTGCTCTG+GGG | - | chr4.1:38223651-38223670 | None:intergenic | 45.0% |
!! | TTGCGAGTTGGTTTCTAGAG+GGG | + | chr4.1:38224346-38224365 | MS.gene08578:intron | 45.0% |
!! | TTGGCCCTTGTTTGCTTTTC+TGG | - | chr4.1:38226537-38226556 | None:intergenic | 45.0% |
!!! | TTGGAGGGTTTTAGAGGGAA+AGG | - | chr4.1:38224526-38224545 | None:intergenic | 45.0% |
!! | AAATTCATATATTTATTATT+AGG | + | chr4.1:38224794-38224813 | MS.gene08578:intron | 5.0% |
AAACCAGCCGACCATTGAAC+TGG | + | chr4.1:38222253-38222272 | MS.gene08578:intron | 50.0% | |
ACAGAGCTGTTCGAGACACA+AGG | + | chr4.1:38225405-38225424 | MS.gene08578:CDS | 50.0% | |
ACCGTTCAAATTCACCGGTG+TGG | + | chr4.1:38222679-38222698 | MS.gene08578:intron | 50.0% | |
AGAGCTGTTCGAGACACAAG+GGG | + | chr4.1:38225407-38225426 | MS.gene08578:CDS | 50.0% | |
AGCCCTTCATGAAATGACGG+AGG | + | chr4.1:38226060-38226079 | MS.gene08578:CDS | 50.0% | |
AGGAGGCAGAGGAACACTAT+CGG | + | chr4.1:38222130-38222149 | MS.gene08578:CDS | 50.0% | |
CAAACACACCCTTATGGGTG+AGG | - | chr4.1:38224329-38224348 | None:intergenic | 50.0% | |
CACCAGACGTGTAGGGAAAA+AGG | - | chr4.1:38221150-38221169 | None:intergenic | 50.0% | |
CACTTAGGCGTGAGAGCAAA+AGG | + | chr4.1:38223690-38223709 | MS.gene08578:CDS | 50.0% | |
CAGAGCTGTTCGAGACACAA+GGG | + | chr4.1:38225406-38225425 | MS.gene08578:CDS | 50.0% | |
CGGGGTGATCAATATCCACT+GGG | - | chr4.1:38226393-38226412 | None:intergenic | 50.0% | |
CTCGTATATCTCATCCCCTC+AGG | + | chr4.1:38223262-38223281 | MS.gene08578:intron | 50.0% | |
CTTCGCTAGGAGGTTGTGAT+GGG | + | chr4.1:38223621-38223640 | MS.gene08578:CDS | 50.0% | |
GGAAGCAGAAGCCCTAATTC+TGG | - | chr4.1:38222899-38222918 | None:intergenic | 50.0% | |
GGACCCCACTTAATGGGATA+AGG | + | chr4.1:38221581-38221600 | MS.gene08578:intron | 50.0% | |
GGAGCTTACAAAAAGCCGTG+AGG | + | chr4.1:38222152-38222171 | MS.gene08578:CDS | 50.0% | |
GGCCTCCGTCATTTCATGAA+GGG | - | chr4.1:38226065-38226084 | None:intergenic | 50.0% | |
GTGGACGAGCTCTTGAAACA+TGG | + | chr4.1:38226795-38226814 | MS.gene08578:intron | 50.0% | |
TCGGGGTGATCAATATCCAC+TGG | - | chr4.1:38226394-38226413 | None:intergenic | 50.0% | |
TGACCCCCTTCCTCTTCAAA+AGG | - | chr4.1:38225149-38225168 | None:intergenic | 50.0% | |
TGTTAGAACGCCTTGAGCAG+AGG | + | chr4.1:38221733-38221752 | MS.gene08578:CDS | 50.0% | |
TTCCTTCCACCAGACGTGTA+GGG | - | chr4.1:38221157-38221176 | None:intergenic | 50.0% | |
TTGGCCAGTTTCACGTAAGG+TGG | + | chr4.1:38222639-38222658 | MS.gene08578:intron | 50.0% | |
TTTCCTTCCACCAGACGTGT+AGG | - | chr4.1:38221158-38221177 | None:intergenic | 50.0% | |
! | CTTTTTCCCTACACGTCTGG+TGG | + | chr4.1:38221148-38221167 | MS.gene08578:intron | 50.0% |
! | GAATGTGTGCAGCTTGGTGA+AGG | + | chr4.1:38226833-38226852 | MS.gene08578:intron | 50.0% |
! | TGCCTTTTTCCCTACACGTC+TGG | + | chr4.1:38221145-38221164 | MS.gene08578:intron | 50.0% |
! | TGTTTGTTTGAGGGTGTGCG+GGG | + | chr4.1:38221086-38221105 | MS.gene08578:intron | 50.0% |
!! | TGGCCTTTTGAAGAGGAAGG+GGG | + | chr4.1:38225143-38225162 | MS.gene08578:CDS | 50.0% |
CACAACCTCCTAGCGAAGCA+AGG | - | chr4.1:38223619-38223638 | None:intergenic | 55.0% | |
CAGGATGACCTTGCTTCGCT+AGG | + | chr4.1:38223608-38223627 | MS.gene08578:CDS | 55.0% | |
CGAGACACAAGGGGACTTTC+AGG | + | chr4.1:38225416-38225435 | MS.gene08578:CDS | 55.0% | |
CTTCATGCCTCCTCTGCTCA+AGG | - | chr4.1:38221746-38221765 | None:intergenic | 55.0% | |
CTTGGTGAAGGGAGGGAACA+GGG | + | chr4.1:38226845-38226864 | MS.gene08578:CDS | 55.0% | |
GATGACCTTGCTTCGCTAGG+AGG | + | chr4.1:38223611-38223630 | MS.gene08578:CDS | 55.0% | |
GCTTCGCTAGGAGGTTGTGA+TGG | + | chr4.1:38223620-38223639 | MS.gene08578:CDS | 55.0% | |
GGAGGCAGAGGAACACTATC+GGG | + | chr4.1:38222131-38222150 | MS.gene08578:CDS | 55.0% | |
GGGCCTCCGTCATTTCATGA+AGG | - | chr4.1:38226066-38226085 | None:intergenic | 55.0% | |
TAGAACGCCTTGAGCAGAGG+AGG | + | chr4.1:38221736-38221755 | MS.gene08578:CDS | 55.0% | |
TAGCTCGGCACCTTTGTCCT+CGG | + | chr4.1:38220930-38220949 | MS.gene08578:CDS | 55.0% | |
TTCCCTACACGTCTGGTGGA+AGG | + | chr4.1:38221152-38221171 | MS.gene08578:intron | 55.0% | |
TTGAAGAGGAAGGGGGTCAG+TGG | + | chr4.1:38225150-38225169 | MS.gene08578:CDS | 55.0% | |
! | CAGAGGAGGCATGAAGCAGA+GGG | + | chr4.1:38221750-38221769 | MS.gene08578:CDS | 55.0% |
! | GGAGGCCCCATTTAGAGCAA+TGG | + | chr4.1:38226078-38226097 | MS.gene08578:CDS | 55.0% |
! | GTTTGTTTGAGGGTGTGCGG+GGG | + | chr4.1:38221087-38221106 | MS.gene08578:intron | 55.0% |
! | TGTGCAGCTTGGTGAAGGGA+GGG | + | chr4.1:38226838-38226857 | MS.gene08578:intron | 55.0% |
!!! | TGTGCGGGGGCTTGGTTTTA+TGG | + | chr4.1:38221100-38221119 | MS.gene08578:intron | 55.0% |
CCATTAAGTGGGGTCCGCAG+GGG | - | chr4.1:38221577-38221596 | None:intergenic | 60.0% | |
CCCATTAAGTGGGGTCCGCA+GGG | - | chr4.1:38221578-38221597 | None:intergenic | 60.0% | |
CCCTGCGGACCCCACTTAAT+GGG | + | chr4.1:38221575-38221594 | MS.gene08578:intron | 60.0% | |
CTGAGGCACAAGGATCCCAG+TGG | + | chr4.1:38226375-38226394 | MS.gene08578:CDS | 60.0% | |
GCACCAGTTCAATGGTCGGC+TGG | - | chr4.1:38222259-38222278 | None:intergenic | 60.0% | |
TCCCATTAAGTGGGGTCCGC+AGG | - | chr4.1:38221579-38221598 | None:intergenic | 60.0% | |
! | CATGGTAGACTGGTCCCCTG+CGG | + | chr4.1:38221560-38221579 | MS.gene08578:intron | 60.0% |
! | GCAGAGGAGGCATGAAGCAG+AGG | + | chr4.1:38221749-38221768 | MS.gene08578:CDS | 60.0% |
! | GCTTGGTGAAGGGAGGGAAC+AGG | + | chr4.1:38226844-38226863 | MS.gene08578:intron | 60.0% |
! | GTGTGCAGCTTGGTGAAGGG+AGG | + | chr4.1:38226837-38226856 | MS.gene08578:intron | 60.0% |
CCCCTGCGGACCCCACTTAA+TGG | + | chr4.1:38221574-38221593 | MS.gene08578:intron | 65.0% | |
! | TTTGAGGGTGTGCGGGGGCT+TGG | + | chr4.1:38221092-38221111 | MS.gene08578:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.1 | gene | 38220907 | 38226902 | 38220907 | ID=MS.gene08578 |
chr4.1 | mRNA | 38220907 | 38226902 | 38220907 | ID=MS.gene08578.t1;Parent=MS.gene08578 |
chr4.1 | exon | 38220907 | 38220978 | 38220907 | ID=MS.gene08578.t1.exon1;Parent=MS.gene08578.t1 |
chr4.1 | CDS | 38220907 | 38220978 | 38220907 | ID=cds.MS.gene08578.t1;Parent=MS.gene08578.t1 |
chr4.1 | exon | 38221699 | 38221813 | 38221699 | ID=MS.gene08578.t1.exon2;Parent=MS.gene08578.t1 |
chr4.1 | CDS | 38221699 | 38221813 | 38221699 | ID=cds.MS.gene08578.t1;Parent=MS.gene08578.t1 |
chr4.1 | exon | 38221920 | 38222005 | 38221920 | ID=MS.gene08578.t1.exon3;Parent=MS.gene08578.t1 |
chr4.1 | CDS | 38221920 | 38222005 | 38221920 | ID=cds.MS.gene08578.t1;Parent=MS.gene08578.t1 |
chr4.1 | exon | 38222078 | 38222173 | 38222078 | ID=MS.gene08578.t1.exon4;Parent=MS.gene08578.t1 |
chr4.1 | CDS | 38222078 | 38222173 | 38222078 | ID=cds.MS.gene08578.t1;Parent=MS.gene08578.t1 |
chr4.1 | exon | 38223575 | 38223711 | 38223575 | ID=MS.gene08578.t1.exon5;Parent=MS.gene08578.t1 |
chr4.1 | CDS | 38223575 | 38223711 | 38223575 | ID=cds.MS.gene08578.t1;Parent=MS.gene08578.t1 |
chr4.1 | exon | 38223850 | 38223952 | 38223850 | ID=MS.gene08578.t1.exon6;Parent=MS.gene08578.t1 |
chr4.1 | CDS | 38223850 | 38223952 | 38223850 | ID=cds.MS.gene08578.t1;Parent=MS.gene08578.t1 |
chr4.1 | exon | 38224962 | 38225041 | 38224962 | ID=MS.gene08578.t1.exon7;Parent=MS.gene08578.t1 |
chr4.1 | CDS | 38224962 | 38225041 | 38224962 | ID=cds.MS.gene08578.t1;Parent=MS.gene08578.t1 |
chr4.1 | exon | 38225137 | 38225215 | 38225137 | ID=MS.gene08578.t1.exon8;Parent=MS.gene08578.t1 |
chr4.1 | CDS | 38225137 | 38225215 | 38225137 | ID=cds.MS.gene08578.t1;Parent=MS.gene08578.t1 |
chr4.1 | exon | 38225380 | 38225437 | 38225380 | ID=MS.gene08578.t1.exon9;Parent=MS.gene08578.t1 |
chr4.1 | CDS | 38225380 | 38225437 | 38225380 | ID=cds.MS.gene08578.t1;Parent=MS.gene08578.t1 |
chr4.1 | exon | 38226023 | 38226120 | 38226023 | ID=MS.gene08578.t1.exon10;Parent=MS.gene08578.t1 |
chr4.1 | CDS | 38226023 | 38226120 | 38226023 | ID=cds.MS.gene08578.t1;Parent=MS.gene08578.t1 |
chr4.1 | exon | 38226329 | 38226423 | 38226329 | ID=MS.gene08578.t1.exon11;Parent=MS.gene08578.t1 |
chr4.1 | CDS | 38226329 | 38226423 | 38226329 | ID=cds.MS.gene08578.t1;Parent=MS.gene08578.t1 |
chr4.1 | exon | 38226845 | 38226902 | 38226845 | ID=MS.gene08578.t1.exon12;Parent=MS.gene08578.t1 |
chr4.1 | CDS | 38226845 | 38226902 | 38226845 | ID=cds.MS.gene08578.t1;Parent=MS.gene08578.t1 |
Gene Sequence |
Protein sequence |