Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22252.t1 | XP_013459242.1 | 98.8 | 720 | 9 | 0 | 1 | 720 | 1 | 720 | 1.10E-300 | 1042.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22252.t1 | Q08C72 | 60.9 | 530 | 201 | 1 | 197 | 720 | 220 | 749 | 8.1e-172 | 605.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22252.t1 | A0A072UW40 | 98.8 | 720 | 9 | 0 | 1 | 720 | 1 | 720 | 7.8e-301 | 1042.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049411 | MS.gene22252 | 0.818485 | 1.91E-52 | -1.69E-46 |
| MS.gene049680 | MS.gene22252 | 0.831244 | 1.86E-55 | -1.69E-46 |
| MS.gene051365 | MS.gene22252 | 0.806482 | 8.05E-50 | -1.69E-46 |
| MS.gene052955 | MS.gene22252 | 0.811891 | 5.58E-51 | -1.69E-46 |
| MS.gene053272 | MS.gene22252 | -0.825846 | 3.75E-54 | -1.69E-46 |
| MS.gene054142 | MS.gene22252 | 0.800398 | 1.47E-48 | -1.69E-46 |
| MS.gene054709 | MS.gene22252 | 0.825598 | 4.30E-54 | -1.69E-46 |
| MS.gene055339 | MS.gene22252 | 0.809216 | 2.11E-50 | -1.69E-46 |
| MS.gene055374 | MS.gene22252 | 0.811867 | 5.65E-51 | -1.69E-46 |
| MS.gene055555 | MS.gene22252 | 0.836553 | 8.75E-57 | -1.69E-46 |
| MS.gene057102 | MS.gene22252 | 0.862215 | 5.93E-64 | -1.69E-46 |
| MS.gene057705 | MS.gene22252 | 0.801225 | 9.96E-49 | -1.69E-46 |
| MS.gene058008 | MS.gene22252 | 0.839088 | 1.95E-57 | -1.69E-46 |
| MS.gene058009 | MS.gene22252 | 0.808047 | 3.75E-50 | -1.69E-46 |
| MS.gene058781 | MS.gene22252 | 0.82635 | 2.85E-54 | -1.69E-46 |
| MS.gene058783 | MS.gene22252 | 0.844735 | 6.29E-59 | -1.69E-46 |
| MS.gene059146 | MS.gene22252 | 0.802488 | 5.48E-49 | -1.69E-46 |
| MS.gene059802 | MS.gene22252 | 0.822434 | 2.37E-53 | -1.69E-46 |
| MS.gene05985 | MS.gene22252 | -0.847048 | 1.48E-59 | -1.69E-46 |
| MS.gene059935 | MS.gene22252 | 0.810205 | 1.29E-50 | -1.69E-46 |
| MS.gene060244 | MS.gene22252 | 0.801684 | 8.02E-49 | -1.69E-46 |
| MS.gene060935 | MS.gene22252 | 0.85512 | 7.81E-62 | -1.69E-46 |
| MS.gene060937 | MS.gene22252 | 0.846321 | 2.34E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene53517 | MS.gene22252 | PPI |
| MS.gene22252 | MS.gene01351 | PPI |
| MS.gene22252 | MS.gene022597 | PPI |
| MS.gene22252 | MS.gene040615 | PPI |
| MS.gene22252 | MS.gene073888 | PPI |
| MS.gene039147 | MS.gene22252 | PPI |
| MS.gene22252 | MS.gene053443 | PPI |
| MS.gene22252 | MS.gene002376 | PPI |
| MS.gene22252 | MS.gene047509 | PPI |
| MS.gene063407 | MS.gene22252 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22252.t1 | MTR_3g434840 | 98.564 | 766 | 11 | 0 | 1 | 766 | 1 | 766 | 0.0 | 1535 |
| MS.gene22252.t1 | MTR_7g093510 | 71.946 | 442 | 116 | 5 | 277 | 715 | 1 | 437 | 0.0 | 655 |
| MS.gene22252.t1 | MTR_7g093340 | 75.115 | 217 | 53 | 1 | 500 | 715 | 7 | 223 | 1.94e-116 | 351 |
| MS.gene22252.t1 | MTR_5g034040 | 62.667 | 75 | 4 | 2 | 529 | 603 | 1 | 51 | 2.66e-21 | 90.5 |
| MS.gene22252.t1 | MTR_7g086290 | 26.946 | 167 | 120 | 2 | 493 | 658 | 444 | 609 | 2.80e-15 | 80.5 |
| MS.gene22252.t1 | MTR_7g086290 | 29.496 | 139 | 97 | 1 | 521 | 658 | 586 | 724 | 2.99e-15 | 80.5 |
| MS.gene22252.t1 | MTR_7g086290 | 29.496 | 139 | 97 | 1 | 521 | 658 | 587 | 725 | 3.02e-15 | 80.5 |
| MS.gene22252.t1 | MTR_5g096330 | 43.878 | 98 | 35 | 3 | 457 | 554 | 16 | 93 | 4.67e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22252.t1 | AT1G80930 | 71.733 | 704 | 167 | 11 | 36 | 727 | 174 | 857 | 0.0 | 976 |
| MS.gene22252.t1 | AT1G52325 | 59.756 | 82 | 33 | 0 | 631 | 712 | 39 | 120 | 1.04e-25 | 103 |
| MS.gene22252.t1 | AT1G52325 | 72.727 | 44 | 12 | 0 | 529 | 572 | 1 | 44 | 9.99e-16 | 75.5 |
| MS.gene22252.t1 | AT5G17930 | 21.850 | 508 | 313 | 14 | 233 | 713 | 301 | 751 | 1.59e-17 | 87.8 |
Find 183 sgRNAs with CRISPR-Local
Find 519 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTTGACTTGGGATGCTTTA+AGG | 0.176862 | 3.4:+38944522 | MS.gene22252:CDS |
| CATAAGAAAGGCAAAGTTTC+AGG | 0.186876 | 3.4:+38946876 | MS.gene22252:CDS |
| CTTCACCACCACGATGTTTC+CGG | 0.221761 | 3.4:-38943947 | None:intergenic |
| CTCAGATATTACGGTCTTCT+AGG | 0.222902 | 3.4:+38947866 | MS.gene22252:CDS |
| CTGAAACTTTGCCTTTCTTA+TGG | 0.257364 | 3.4:-38946875 | None:intergenic |
| AGGAAGAAGTTGATCGAAAA+AGG | 0.273803 | 3.4:+38943976 | MS.gene22252:CDS |
| ATTTATTAAGATTCTCTTCC+AGG | 0.277884 | 3.4:+38948099 | MS.gene22252:CDS |
| GGATAACCGTCGAAGGTATA+AGG | 0.286872 | 3.4:+38944016 | MS.gene22252:CDS |
| GCTTTAAGGAAGAGTATTAA+TGG | 0.296789 | 3.4:+38944536 | MS.gene22252:CDS |
| AGATCGGCGTCGTCGGTATA+AGG | 0.299383 | 3.4:+38944136 | MS.gene22252:CDS |
| ATATGATAAGAAGAGGAATT+TGG | 0.304825 | 3.4:+38944175 | MS.gene22252:CDS |
| AACGTGATGTGAAGAGAATT+AGG | 0.329271 | 3.4:+38944054 | MS.gene22252:CDS |
| CGTGTTCAATTTCTAATTGA+AGG | 0.334557 | 3.4:+38946844 | MS.gene22252:CDS |
| AAAGGAGGCATAGAGTTGAT+AGG | 0.343956 | 3.4:+38944204 | MS.gene22252:CDS |
| AATGGCGATGCATCTAAGTT+AGG | 0.346040 | 3.4:+38944413 | MS.gene22252:CDS |
| CAAACCCGACCCCAATTATC+TGG | 0.347857 | 3.4:+38947426 | MS.gene22252:CDS |
| TATTAATGGATTGGTGAATA+AGG | 0.348278 | 3.4:+38944550 | MS.gene22252:CDS |
| CTCTCACCGAGAGGACTTCA+TGG | 0.369360 | 3.4:+38945071 | MS.gene22252:CDS |
| AAAGAAGGCATAGGGCTGAT+AGG | 0.374529 | 3.4:+38944084 | MS.gene22252:CDS |
| GATGGCGTCACCCGGGTTTA+CGG | 0.376345 | 3.4:+38944670 | MS.gene22252:CDS |
| TTCACATCCATTGGTCTTGG+TGG | 0.379622 | 3.4:+38950111 | MS.gene22252:CDS |
| AAGAAGAAAGATGAAGGAAG+TGG | 0.383696 | 3.4:+38944356 | MS.gene22252:CDS |
| ATACCGGCAAGTGTGATAAA+TGG | 0.389347 | 3.4:+38944395 | MS.gene22252:CDS |
| ATCATCCTCGCTAACTTAAA+CGG | 0.399524 | 3.4:-38944461 | None:intergenic |
| GGCATAGGGCTGATAGGGTT+AGG | 0.401872 | 3.4:+38944090 | MS.gene22252:CDS |
| GACGAACTGCCCTTCTTCCT+CGG | 0.406324 | 3.4:-38943871 | None:intergenic |
| GAGAATTTGATTCGTGGAAG+AGG | 0.407751 | 3.4:+38944617 | MS.gene22252:CDS |
| AGAAGGACAGGAAGAGAGAA+AGG | 0.408044 | 3.4:+38944246 | MS.gene22252:CDS |
| TCGCCATTTATCACACTTGC+CGG | 0.408536 | 3.4:-38944398 | None:intergenic |
| AAGCTCCGATTCATCAGATT+CGG | 0.416241 | 3.4:+38950233 | MS.gene22252:CDS |
| TTAACCTCTCATTTAGCAAC+CGG | 0.416989 | 3.4:-38950008 | None:intergenic |
| TGTTGTTGCATGATCATCCT+TGG | 0.421914 | 3.4:-38950171 | None:intergenic |
| TACAGGGTTATCCAGCTGTT+CGG | 0.427354 | 3.4:+38947208 | MS.gene22252:intron |
| ACGTGATGTGAAGAGAATTA+GGG | 0.427846 | 3.4:+38944055 | MS.gene22252:CDS |
| AGAACTTATCTCAGATATTA+CGG | 0.428108 | 3.4:+38947857 | MS.gene22252:CDS |
| AAGGAAGAGTATTAATGGAT+TGG | 0.432567 | 3.4:+38944541 | MS.gene22252:CDS |
| AGGATTATTTGCCATAAGAA+AGG | 0.434562 | 3.4:+38946864 | MS.gene22252:CDS |
| TAATATTACGAATATAATTC+CGG | 0.435178 | 3.4:+38944583 | MS.gene22252:CDS |
| TCGTGGTGGTGAAGATTTAG+AGG | 0.435202 | 3.4:+38943956 | MS.gene22252:CDS |
| ATAGGAGGAATGGGGAGAGA+AGG | 0.436272 | 3.4:+38944288 | MS.gene22252:CDS |
| TAGGAGGAATGGGGAGAGAA+GGG | 0.439511 | 3.4:+38944289 | MS.gene22252:CDS |
| AGCTTCTTCATTCTCTTCAT+CGG | 0.444666 | 3.4:-38947554 | None:intergenic |
| GGAAGGCTCGGATGCTGAAT+CGG | 0.445016 | 3.4:+38947516 | MS.gene22252:CDS |
| TCAAGTTCAGGCCGAACAGC+TGG | 0.448583 | 3.4:-38947219 | None:intergenic |
| AGCTCCGATTCATCAGATTC+GGG | 0.454738 | 3.4:+38950234 | MS.gene22252:CDS |
| AGCAAATACATCCGTAAACC+CGG | 0.455143 | 3.4:-38944681 | None:intergenic |
| GGAAGAGGAATCAGAGGGAG+AGG | 0.455771 | 3.4:+38947495 | MS.gene22252:CDS |
| ATGTGAAGAGAATTAGGGAT+AGG | 0.462288 | 3.4:+38944060 | MS.gene22252:CDS |
| TGCTCCACGAGGTCAAGTTC+AGG | 0.464216 | 3.4:-38947231 | None:intergenic |
| TGTGAAGTTTGTAGCACATC+TGG | 0.464680 | 3.4:+38944920 | MS.gene22252:CDS |
| ATGACGATGATAGGAGGAAT+GGG | 0.465728 | 3.4:+38944279 | MS.gene22252:CDS |
| ATGGCGATGCATCTAAGTTA+GGG | 0.468521 | 3.4:+38944414 | MS.gene22252:CDS |
| TTCTCCAGATAATTGGGGTC+GGG | 0.471760 | 3.4:-38947430 | None:intergenic |
| TATAATTCCGGAGTTGTTTG+CGG | 0.475883 | 3.4:+38944595 | MS.gene22252:CDS |
| AACACGAAGTTTCCTCAAGT+TGG | 0.480942 | 3.4:+38944722 | MS.gene22252:CDS |
| TGAACTTGACCTCGTGGAGC+AGG | 0.481515 | 3.4:+38947233 | MS.gene22252:CDS |
| GGTTCCCGAATCTGATGAAT+CGG | 0.481563 | 3.4:-38950238 | None:intergenic |
| AAGGAGGCATAGAGTTGATA+GGG | 0.482275 | 3.4:+38944205 | MS.gene22252:CDS |
| GAGAGCGAGGACGGTGATAC+CGG | 0.485924 | 3.4:+38944379 | MS.gene22252:CDS |
| GATAACCGTCGAAGGTATAA+GGG | 0.486725 | 3.4:+38944017 | MS.gene22252:CDS |
| CGGAGTATCAGAGGTTGACT+TGG | 0.488147 | 3.4:+38944510 | MS.gene22252:CDS |
| ACTTGACTCTGACTCAGAAC+TGG | 0.488401 | 3.4:-38950259 | None:intergenic |
| AAGCTTGCTGGGTGAGGAAG+AGG | 0.489089 | 3.4:+38947480 | MS.gene22252:CDS |
| ATAAGAAGAGGAATTTGGAT+AGG | 0.490938 | 3.4:+38944180 | MS.gene22252:CDS |
| ATCGACGCGATGACGATGAT+AGG | 0.494629 | 3.4:+38944270 | MS.gene22252:CDS |
| AAGTCGTGTCGTCCTCAGTC+AGG | 0.494714 | 3.4:-38948063 | None:intergenic |
| ATCTGAGATAAGTTCTCTCC+TGG | 0.500569 | 3.4:-38947850 | None:intergenic |
| CAGGAATTGTCAGAGCATCT+AGG | 0.500837 | 3.4:+38949982 | MS.gene22252:intron |
| CCTCTTGACCTGGCTCAAGA+TGG | 0.500906 | 3.4:-38947690 | None:intergenic |
| AAAGGAATAGGGATAGGGAT+AGG | 0.501070 | 3.4:+38943994 | MS.gene22252:CDS |
| CCTCATCCAAGGAGACTTCG+TGG | 0.501456 | 3.4:-38947269 | None:intergenic |
| GATAACCCACGAAGTCTCCT+TGG | 0.501647 | 3.4:+38947263 | MS.gene22252:CDS |
| GAAAGTAAGAAGAAAGATGA+AGG | 0.501733 | 3.4:+38944350 | MS.gene22252:CDS |
| AGTGAATCGTCCGAGGAAGA+AGG | 0.504113 | 3.4:+38943861 | MS.gene22252:CDS |
| TCAAAAGAATCCTGCATGGT+TGG | 0.504273 | 3.4:-38950036 | None:intergenic |
| TAGGGATAATGATAATGATA+AGG | 0.505045 | 3.4:+38944109 | MS.gene22252:CDS |
| TCAGATATTACGGTCTTCTA+GGG | 0.505318 | 3.4:+38947867 | MS.gene22252:CDS |
| CTAGAGATGGGTAGAGGAGA+AGG | 0.506743 | 3.4:+38943837 | None:intergenic |
| TACGGATGTATTTGCTGCGA+TGG | 0.513062 | 3.4:+38944688 | MS.gene22252:CDS |
| ATTTATTTGTTTCGAGCCTG+TGG | 0.514254 | 3.4:-38947964 | None:intergenic |
| AGGGATAGAGTTGAAAAGAA+TGG | 0.514880 | 3.4:+38944308 | MS.gene22252:CDS |
| AGCAGTATTCATTGATCCAC+AGG | 0.516452 | 3.4:+38947948 | MS.gene22252:CDS |
| AAGAAGGCATAGGGCTGATA+GGG | 0.519755 | 3.4:+38944085 | MS.gene22252:CDS |
| ATCAGAGGGAGAGGAAGGCT+CGG | 0.519884 | 3.4:+38947504 | MS.gene22252:CDS |
| TCGTCGGTATAAGGATGATT+CGG | 0.521451 | 3.4:+38944145 | MS.gene22252:CDS |
| AGAAGAAAGATGAAGGAAGT+GGG | 0.524320 | 3.4:+38944357 | MS.gene22252:CDS |
| ATAATGATAATGAGAAGGAC+AGG | 0.525843 | 3.4:+38944234 | MS.gene22252:CDS |
| GATGACGATGATAGGAGGAA+TGG | 0.527318 | 3.4:+38944278 | MS.gene22252:CDS |
| TAAGTTAGCGAGGATGATGA+AGG | 0.527435 | 3.4:+38944466 | MS.gene22252:CDS |
| AAGTCACAGATGGCGTCACC+CGG | 0.527531 | 3.4:+38944662 | MS.gene22252:CDS |
| AACTCACCATGAAGTCCTCT+CGG | 0.527918 | 3.4:-38945077 | None:intergenic |
| CAAGTCAACCTCTGATACTC+CGG | 0.530824 | 3.4:-38944509 | None:intergenic |
| GGGTGAGGAAGAGGAATCAG+AGG | 0.530871 | 3.4:+38947489 | MS.gene22252:CDS |
| GAGGAATCAGAGGGAGAGGA+AGG | 0.532139 | 3.4:+38947499 | MS.gene22252:CDS |
| AATGTACCAAGGGAAGTCTC+AGG | 0.534127 | 3.4:-38947300 | None:intergenic |
| GAATTAGGGATAGGGAAAGA+AGG | 0.534748 | 3.4:+38944069 | MS.gene22252:CDS |
| AGCCACTTCAACACTGTCAT+CGG | 0.534953 | 3.4:-38945009 | None:intergenic |
| AAGGAATAGGGATAGGGATA+GGG | 0.535428 | 3.4:+38943995 | MS.gene22252:CDS |
| GCATCTAAGTTAGGGAAAAG+TGG | 0.535960 | 3.4:+38944422 | MS.gene22252:CDS |
| ATTCTCCAGATAATTGGGGT+CGG | 0.536893 | 3.4:-38947431 | None:intergenic |
| AGAGGAATTTGGATAGGGAA+AGG | 0.536981 | 3.4:+38944186 | MS.gene22252:CDS |
| TGTCAGAGCATCTAGGCATC+CGG | 0.540897 | 3.4:+38949989 | MS.gene22252:CDS |
| AGTTGACGATAAGAGTAGTC+CGG | 0.544129 | 3.4:+38944490 | MS.gene22252:CDS |
| AGAATTTGATTCGTGGAAGA+GGG | 0.547231 | 3.4:+38944618 | MS.gene22252:CDS |
| AACAAATAAATTGAGAAATG+TGG | 0.548686 | 3.4:+38947976 | MS.gene22252:CDS |
| TGTGAAGAGAATTAGGGATA+GGG | 0.548968 | 3.4:+38944061 | MS.gene22252:CDS |
| TTTCGTGGAATTCTGCATGA+AGG | 0.549789 | 3.4:+38946808 | MS.gene22252:CDS |
| AGAGTTGAAGAAAAGCTTGC+TGG | 0.550608 | 3.4:+38947468 | MS.gene22252:CDS |
| TAAGAAGAGGAATTTGGATA+GGG | 0.551290 | 3.4:+38944181 | MS.gene22252:CDS |
| ATGAAGGAAGTGGGAGAGCG+AGG | 0.553906 | 3.4:+38944366 | MS.gene22252:CDS |
| GCATAGGGCTGATAGGGTTA+GGG | 0.554442 | 3.4:+38944091 | MS.gene22252:CDS |
| AGGAGAGAGATCGGCGTCGT+CGG | 0.555344 | 3.4:+38944129 | MS.gene22252:CDS |
| AGAATGTGGCTCAATGCTGC+AGG | 0.558595 | 3.4:+38945046 | MS.gene22252:CDS |
| TTCACAGCAGCAAGTAATTG+AGG | 0.561550 | 3.4:-38944903 | None:intergenic |
| ATCCTCGCTAACTTAAACGG+CGG | 0.561726 | 3.4:-38944458 | None:intergenic |
| AAATTCTCCGCAAACAACTC+CGG | 0.563195 | 3.4:-38944602 | None:intergenic |
| GAAGAAAAGCTTGCTGGGTG+AGG | 0.564485 | 3.4:+38947474 | MS.gene22252:CDS |
| GTTAAATGATCCAACCATGC+AGG | 0.568417 | 3.4:+38950026 | MS.gene22252:CDS |
| GACAGTGTTGAAGTGGCTGT+TGG | 0.568452 | 3.4:+38945014 | MS.gene22252:CDS |
| ATGAGGAATATGATAAGAAG+AGG | 0.569220 | 3.4:+38944168 | MS.gene22252:CDS |
| ATAGATCCTGAGACTTCCCT+TGG | 0.569265 | 3.4:+38947294 | MS.gene22252:CDS |
| GTGAATCGTCCGAGGAAGAA+GGG | 0.570148 | 3.4:+38943862 | MS.gene22252:CDS |
| TTTGCGGAGAATTTGATTCG+TGG | 0.570272 | 3.4:+38944611 | MS.gene22252:CDS |
| AGAGTAGTCCGGAGTATCAG+AGG | 0.573006 | 3.4:+38944501 | MS.gene22252:CDS |
| AGGATCTATTTCCTCATCCA+AGG | 0.574152 | 3.4:-38947280 | None:intergenic |
| CTCATCCAAGGAGACTTCGT+GGG | 0.575131 | 3.4:-38947268 | None:intergenic |
| AGGAAGTGGGAGAGCGAGGA+CGG | 0.576112 | 3.4:+38944370 | MS.gene22252:CDS |
| GCTTCTCGAATGTTGCAGCC+AGG | 0.578281 | 3.4:+38947832 | MS.gene22252:CDS |
| CCACGAAGTCTCCTTGGATG+AGG | 0.579818 | 3.4:+38947269 | MS.gene22252:CDS |
| CAAACCCTAGAGATGGGTAG+AGG | 0.584530 | 3.4:+38943831 | None:intergenic |
| TGCTTCCTCAAAATCTACAC+TGG | 0.585227 | 3.4:-38947647 | None:intergenic |
| TCAATGCTTACCTCTTGACC+TGG | 0.586308 | 3.4:-38947700 | None:intergenic |
| AGACCGCCGTGGAGCTGACG+TGG | 0.587724 | 3.4:+38943914 | MS.gene22252:CDS |
| ATAATGATAAGGAGAGAGAT+CGG | 0.588409 | 3.4:+38944120 | MS.gene22252:CDS |
| AAGAACCCTTATACCTTCGA+CGG | 0.588825 | 3.4:-38944022 | None:intergenic |
| CCATCTTGAGCCAGGTCAAG+AGG | 0.591466 | 3.4:+38947690 | MS.gene22252:CDS |
| TTTCATTCTCCAGATAATTG+GGG | 0.592695 | 3.4:-38947435 | None:intergenic |
| GGAATTTGGATAGGGAAAGG+AGG | 0.593854 | 3.4:+38944189 | MS.gene22252:CDS |
| AGAATGGTGGTGATAATGAG+AGG | 0.595271 | 3.4:+38944324 | MS.gene22252:CDS |
| AGTAAGACCACCAAGACCAA+TGG | 0.596030 | 3.4:-38950118 | None:intergenic |
| GTATAAGGATGATTCGGATG+AGG | 0.601974 | 3.4:+38944151 | MS.gene22252:CDS |
| ATATATGATAAGACGTGCCA+AGG | 0.604106 | 3.4:-38948037 | None:intergenic |
| TTCCGATGACAGTGTTGAAG+TGG | 0.604254 | 3.4:+38945007 | MS.gene22252:CDS |
| CTAAGTTAGGGAAAAGTGGA+GGG | 0.605295 | 3.4:+38944426 | MS.gene22252:CDS |
| GGATAGGGAAAGAAGGCATA+GGG | 0.605833 | 3.4:+38944076 | MS.gene22252:CDS |
| GATCCTCCACGTCAGCTCCA+CGG | 0.609053 | 3.4:-38943920 | None:intergenic |
| GGGATAGGGAAAGAAGGCAT+AGG | 0.609566 | 3.4:+38944075 | MS.gene22252:CDS |
| TGATGATAATGATAATGAGA+AGG | 0.610107 | 3.4:+38944229 | MS.gene22252:CDS |
| TTCCGCCGTTTAAGTTAGCG+AGG | 0.612275 | 3.4:+38944456 | MS.gene22252:CDS |
| ATCATATATTCGCCTGACTG+AGG | 0.612797 | 3.4:+38948051 | MS.gene22252:CDS |
| GACGCGATGACGATGATAGG+AGG | 0.612992 | 3.4:+38944273 | MS.gene22252:CDS |
| AGTAAAAGATCACCAACTTG+AGG | 0.613759 | 3.4:-38944734 | None:intergenic |
| GAAGGACAGGAAGAGAGAAA+GGG | 0.616059 | 3.4:+38944247 | MS.gene22252:CDS |
| TAAGTTAGGGAAAAGTGGAG+GGG | 0.620618 | 3.4:+38944427 | MS.gene22252:CDS |
| CTGACGTGGAGGATCTTCGC+CGG | 0.621555 | 3.4:+38943928 | MS.gene22252:CDS |
| AGAAGGAAGTGAATCGTCCG+AGG | 0.621584 | 3.4:+38943854 | MS.gene22252:CDS |
| AGCGTATAAGCGTAATGACA+AGG | 0.625593 | 3.4:+38944784 | MS.gene22252:CDS |
| GATAGAGTTGAAAAGAATGG+TGG | 0.626095 | 3.4:+38944311 | MS.gene22252:CDS |
| GAGTTGAAGAAAAGCTTGCT+GGG | 0.627690 | 3.4:+38947469 | MS.gene22252:CDS |
| TCTAAGTTAGGGAAAAGTGG+AGG | 0.631512 | 3.4:+38944425 | MS.gene22252:CDS |
| GGAGTATCAGAGGTTGACTT+GGG | 0.634579 | 3.4:+38944511 | MS.gene22252:CDS |
| GAAGAGAAGCGAGACCGCCG+TGG | 0.638989 | 3.4:+38943903 | MS.gene22252:CDS |
| GCAAGTTTCAGATTCTGACT+CGG | 0.639505 | 3.4:+38950197 | MS.gene22252:CDS |
| ACTTCAACACTGTCATCGGA+AGG | 0.639702 | 3.4:-38945005 | None:intergenic |
| TCGGCCTGAACTTGACCTCG+TGG | 0.644434 | 3.4:+38947227 | MS.gene22252:CDS |
| CTAATCTTGTCAATCTGCGG+CGG | 0.648589 | 3.4:+38947602 | MS.gene22252:CDS |
| ATCGTGTATGAAGTCACAGA+TGG | 0.650101 | 3.4:+38944652 | MS.gene22252:CDS |
| GAATGGTGGTGATAATGAGA+GGG | 0.653081 | 3.4:+38944325 | MS.gene22252:CDS |
| GGTGAGGAAGAGGAATCAGA+GGG | 0.656246 | 3.4:+38947490 | MS.gene22252:CDS |
| AGACTAATCTTGTCAATCTG+CGG | 0.657517 | 3.4:+38947599 | MS.gene22252:CDS |
| GCAAATACATCCGTAAACCC+GGG | 0.659500 | 3.4:-38944680 | None:intergenic |
| TATCGCGCTAGAGCTGCTCA+CGG | 0.663103 | 3.4:+38944968 | MS.gene22252:CDS |
| AGTCACAGATGGCGTCACCC+GGG | 0.663171 | 3.4:+38944663 | MS.gene22252:CDS |
| GGGATAGGGATAACCGTCGA+AGG | 0.665076 | 3.4:+38944009 | MS.gene22252:CDS |
| CCGCCGTGGAGCTGACGTGG+AGG | 0.669781 | 3.4:+38943917 | MS.gene22252:CDS |
| GGATTCAAAAGAATCCTGCA+TGG | 0.674975 | 3.4:-38950040 | None:intergenic |
| TGACGATGATAGGAGGAATG+GGG | 0.674999 | 3.4:+38944280 | MS.gene22252:CDS |
| GCATCCGGTTGCTAAATGAG+AGG | 0.690045 | 3.4:+38950004 | MS.gene22252:CDS |
| CTGCAGGATCTCTCACCGAG+AGG | 0.706164 | 3.4:+38945062 | MS.gene22252:CDS |
| TCTGATCTTCCTGCTCCACG+AGG | 0.706624 | 3.4:-38947242 | None:intergenic |
| GATCTTCGCCGGAAACATCG+TGG | 0.723457 | 3.4:+38943939 | MS.gene22252:CDS |
| CTTCGCCGGAAACATCGTGG+TGG | 0.733681 | 3.4:+38943942 | MS.gene22252:CDS |
| CCTCCACGTCAGCTCCACGG+CGG | 0.748184 | 3.4:-38943917 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAACAAAAACAAAAAAAAT+TGG | - | chr3.4:38945557-38945576 | None:intergenic | 10.0% |
| !! | ATAATAATTATATTAACATG+TGG | + | chr3.4:38947349-38947368 | MS.gene22252:intron | 10.0% |
| !! | TAAAAATATACGATATAAAA+TGG | - | chr3.4:38949856-38949875 | None:intergenic | 10.0% |
| !!! | ATTTTAATAAAATTCTGTTT+TGG | - | chr3.4:38947777-38947796 | None:intergenic | 10.0% |
| !! | AATATAACCATATAGTTAAA+GGG | - | chr3.4:38945105-38945124 | None:intergenic | 15.0% |
| !! | AATCATAATAAAATTTCTCT+CGG | - | chr3.4:38948330-38948349 | None:intergenic | 15.0% |
| !! | ATATAAAATGGAAATATCTT+GGG | - | chr3.4:38949844-38949863 | None:intergenic | 15.0% |
| !! | ATTGCTTAAAATTTGATAAA+AGG | + | chr3.4:38948216-38948235 | MS.gene22252:intron | 15.0% |
| !! | CTTATATATTTATCTGTTAA+AGG | - | chr3.4:38945691-38945710 | None:intergenic | 15.0% |
| !! | TAATATTACGAATATAATTC+CGG | + | chr3.4:38944583-38944602 | MS.gene22252:CDS | 15.0% |
| !! | TACTAAAAAAAAAAAACTCA+TGG | - | chr3.4:38949526-38949545 | None:intergenic | 15.0% |
| !! | TTAACAGATAAATATATAAG+TGG | + | chr3.4:38945691-38945710 | MS.gene22252:intron | 15.0% |
| !!! | AAAAGACATTTATTTTGAAA+TGG | - | chr3.4:38945371-38945390 | None:intergenic | 15.0% |
| !!! | AAATATTTTTCATGTTTTGA+TGG | - | chr3.4:38948894-38948913 | None:intergenic | 15.0% |
| !!! | ATATACAAGTTGTTTTATTA+TGG | + | chr3.4:38948957-38948976 | MS.gene22252:intron | 15.0% |
| !!! | TTCAAAATAAATGTCTTTTA+AGG | + | chr3.4:38945372-38945391 | MS.gene22252:intron | 15.0% |
| !!! | TTTATTATGATTTTTGACAA+AGG | + | chr3.4:38948338-38948357 | MS.gene22252:intron | 15.0% |
| !! | AACAAATAAATTGAGAAATG+TGG | + | chr3.4:38947976-38947995 | MS.gene22252:CDS | 20.0% |
| !! | ATCATAATAAAATTTCTCTC+GGG | - | chr3.4:38948329-38948348 | None:intergenic | 20.0% |
| !! | ATTTATATAATCTCTTGTGT+TGG | + | chr3.4:38946638-38946657 | MS.gene22252:intron | 20.0% |
| !! | CAATATAACCATATAGTTAA+AGG | - | chr3.4:38945106-38945125 | None:intergenic | 20.0% |
| !! | GATATAAAATGGAAATATCT+TGG | - | chr3.4:38949845-38949864 | None:intergenic | 20.0% |
| !! | TAAGAATCTGAACAAAATTT+AGG | + | chr3.4:38948242-38948261 | MS.gene22252:intron | 20.0% |
| !! | TATTGCAATATATCATACAA+GGG | + | chr3.4:38945814-38945833 | MS.gene22252:intron | 20.0% |
| !! | TGAAATGTTAAATAGAAAGA+TGG | - | chr3.4:38948676-38948695 | None:intergenic | 20.0% |
| !! | TTATGAATCATACTATTCTT+TGG | + | chr3.4:38945200-38945219 | MS.gene22252:intron | 20.0% |
| !! | TTGTAAAGAAGAGAATATTA+TGG | - | chr3.4:38948738-38948757 | None:intergenic | 20.0% |
| !!! | AAAGATAGGTAAATGATTTT+TGG | + | chr3.4:38945249-38945268 | MS.gene22252:intron | 20.0% |
| !!! | AGATATTCATTTGTTACTTT+TGG | - | chr3.4:38945900-38945919 | None:intergenic | 20.0% |
| !!! | AGTTAGATTTATAATTTTGC+AGG | + | chr3.4:38946772-38946791 | MS.gene22252:intron | 20.0% |
| !!! | ATTTAAAATAACTTAGCATG+AGG | - | chr3.4:38945975-38945994 | None:intergenic | 20.0% |
| !!! | GAGAAATTTTAAAAAAGGAT+GGG | - | chr3.4:38949314-38949333 | None:intergenic | 20.0% |
| !!! | GAGTGTTACTTTATAATAAT+AGG | + | chr3.4:38946388-38946407 | MS.gene22252:intron | 20.0% |
| !!! | TACCTTAATTTTTGGTAATT+TGG | + | chr3.4:38946506-38946525 | MS.gene22252:intron | 20.0% |
| !!! | TCTTTTGTATGGTATTTTAA+AGG | + | chr3.4:38947142-38947161 | MS.gene22252:intron | 20.0% |
| !!! | TGAAGTAAAAGTAATGTTTT+GGG | + | chr3.4:38946160-38946179 | MS.gene22252:intron | 20.0% |
| !!! | TGAGAAATTTTAAAAAAGGA+TGG | - | chr3.4:38949315-38949334 | None:intergenic | 20.0% |
| !!! | TTGTTTTTGTTTTTAAACCT+TGG | + | chr3.4:38945564-38945583 | MS.gene22252:intron | 20.0% |
| !!! | TTTCCAATTTTACTTTTAGT+CGG | + | chr3.4:38944832-38944851 | MS.gene22252:intron | 20.0% |
| ! | AAAAATTCCAAAGAAAAGAG+AGG | + | chr3.4:38948367-38948386 | MS.gene22252:intron | 25.0% |
| ! | AAAACATGGTAAAGAAAGAT+AGG | + | chr3.4:38945235-38945254 | MS.gene22252:intron | 25.0% |
| ! | AAACCGACTAAAAGTAAAAT+TGG | - | chr3.4:38944838-38944857 | None:intergenic | 25.0% |
| ! | AAATGCAATGATTAGAAGAA+AGG | + | chr3.4:38945414-38945433 | MS.gene22252:intron | 25.0% |
| ! | AATGCAATGATTAGAAGAAA+GGG | + | chr3.4:38945415-38945434 | MS.gene22252:intron | 25.0% |
| ! | ACAAAAAAAATTGGTACTCA+TGG | - | chr3.4:38945548-38945567 | None:intergenic | 25.0% |
| ! | ACCAAATAAAAACAACAGTT+TGG | - | chr3.4:38948277-38948296 | None:intergenic | 25.0% |
| ! | AGAACTTATCTCAGATATTA+CGG | + | chr3.4:38947857-38947876 | MS.gene22252:CDS | 25.0% |
| ! | AGGTGTGATTAATATTTCAT+TGG | + | chr3.4:38946211-38946230 | MS.gene22252:intron | 25.0% |
| ! | AGTATTTGAAAAATATGCCA+AGG | + | chr3.4:38950154-38950173 | MS.gene22252:CDS | 25.0% |
| ! | ATAACATAATTTCATGCACA+TGG | - | chr3.4:38945341-38945360 | None:intergenic | 25.0% |
| ! | ATATGATAAGAAGAGGAATT+TGG | + | chr3.4:38944175-38944194 | MS.gene22252:CDS | 25.0% |
| ! | ATTTATTAAGATTCTCTTCC+AGG | + | chr3.4:38948099-38948118 | MS.gene22252:CDS | 25.0% |
| ! | CAAAAAAAATTGGTACTCAT+GGG | - | chr3.4:38945547-38945566 | None:intergenic | 25.0% |
| ! | CACCAAATTACCAAAAATTA+AGG | - | chr3.4:38946511-38946530 | None:intergenic | 25.0% |
| ! | CTATTACTGTTGTTAAGAAT+TGG | - | chr3.4:38948532-38948551 | None:intergenic | 25.0% |
| ! | CTATTGCAATATATCATACA+AGG | + | chr3.4:38945813-38945832 | MS.gene22252:intron | 25.0% |
| ! | GAAAATAGAAAATGTACCAA+GGG | - | chr3.4:38947313-38947332 | None:intergenic | 25.0% |
| ! | GATAAATATATAAGTGGAAC+TGG | + | chr3.4:38945697-38945716 | MS.gene22252:intron | 25.0% |
| ! | TAAAGAAACCAATAGTTGAT+GGG | - | chr3.4:38946125-38946144 | None:intergenic | 25.0% |
| ! | TAAAGAAGAGAATATTATGG+TGG | - | chr3.4:38948735-38948754 | None:intergenic | 25.0% |
| ! | TAACATAATTTCATGCACAT+GGG | - | chr3.4:38945340-38945359 | None:intergenic | 25.0% |
| ! | TGAAAATAGAAAATGTACCA+AGG | - | chr3.4:38947314-38947333 | None:intergenic | 25.0% |
| ! | TTTCTCAAAAAACAAAGGTA+CGG | - | chr3.4:38946022-38946041 | None:intergenic | 25.0% |
| !! | AACTTCTGTACCTTAATTTT+TGG | + | chr3.4:38946498-38946517 | MS.gene22252:intron | 25.0% |
| !! | AAGCATAAGTGAAAAAGTAT+AGG | - | chr3.4:38948560-38948579 | None:intergenic | 25.0% |
| !! | AGGTACACTATTTTATTGTT+TGG | + | chr3.4:38946896-38946915 | MS.gene22252:intron | 25.0% |
| !! | GCATCTTAACAATTTTATTC+AGG | + | chr3.4:38949375-38949394 | MS.gene22252:intron | 25.0% |
| !! | GGTACACTATTTTATTGTTT+GGG | + | chr3.4:38946897-38946916 | MS.gene22252:intron | 25.0% |
| !! | GTACACTATTTTATTGTTTG+GGG | + | chr3.4:38946898-38946917 | MS.gene22252:intron | 25.0% |
| !! | GTGAAGTAAAAGTAATGTTT+TGG | + | chr3.4:38946159-38946178 | MS.gene22252:intron | 25.0% |
| !! | TAGGGATAATGATAATGATA+AGG | + | chr3.4:38944109-38944128 | MS.gene22252:CDS | 25.0% |
| !! | TGATGATAATGATAATGAGA+AGG | + | chr3.4:38944229-38944248 | MS.gene22252:CDS | 25.0% |
| !! | TTTTCATTCTCCAGATAATT+GGG | - | chr3.4:38947439-38947458 | None:intergenic | 25.0% |
| !!! | AAATTTTTTGCTCATTTGCT+CGG | + | chr3.4:38948001-38948020 | MS.gene22252:CDS | 25.0% |
| !!! | AGACATTTATTTTGAAATGG+AGG | - | chr3.4:38945368-38945387 | None:intergenic | 25.0% |
| !!! | ATCAATTTTTTCACATCCAT+TGG | + | chr3.4:38950102-38950121 | MS.gene22252:CDS | 25.0% |
| !!! | CTTTTAGTCGGTTTTTAATT+TGG | + | chr3.4:38944844-38944863 | MS.gene22252:intron | 25.0% |
| !!! | GAATATGTGCTTTTAAAACT+TGG | - | chr3.4:38948193-38948212 | None:intergenic | 25.0% |
| !!! | GACATTTATTTTGAAATGGA+GGG | - | chr3.4:38945367-38945386 | None:intergenic | 25.0% |
| !!! | TATTAATGGATTGGTGAATA+AGG | + | chr3.4:38944550-38944569 | MS.gene22252:CDS | 25.0% |
| !!! | TATTTGGTTTTTTGTATGCT+AGG | + | chr3.4:38948289-38948308 | MS.gene22252:intron | 25.0% |
| !!! | TCCAAACTGTTGTTTTTATT+TGG | + | chr3.4:38948273-38948292 | MS.gene22252:intron | 25.0% |
| !!! | TGGGTGAGAAATTTTAAAAA+AGG | - | chr3.4:38949319-38949338 | None:intergenic | 25.0% |
| !!! | TTTGTTTTTAAACCTTGGTA+CGG | + | chr3.4:38945569-38945588 | MS.gene22252:intron | 25.0% |
| AAAATACTTCCTTGAGAGAT+GGG | - | chr3.4:38949338-38949357 | None:intergenic | 30.0% | |
| AAATTATCCCCATCAACTAT+TGG | + | chr3.4:38946114-38946133 | MS.gene22252:intron | 30.0% | |
| ACGGTATAGTTGTATACTAA+TGG | + | chr3.4:38948821-38948840 | MS.gene22252:intron | 30.0% | |
| AGGATTATTTGCCATAAGAA+AGG | + | chr3.4:38946864-38946883 | MS.gene22252:CDS | 30.0% | |
| AGTTGATCGAAAAAGGAATA+GGG | + | chr3.4:38943983-38944002 | MS.gene22252:CDS | 30.0% | |
| ATAAGAAGAGGAATTTGGAT+AGG | + | chr3.4:38944180-38944199 | MS.gene22252:CDS | 30.0% | |
| ATAATGATAAGGAGAGAGAT+CGG | + | chr3.4:38944120-38944139 | MS.gene22252:CDS | 30.0% | |
| ATGAGGAATATGATAAGAAG+AGG | + | chr3.4:38944168-38944187 | MS.gene22252:CDS | 30.0% | |
| ATGTTGCATGAATATATTGG+TGG | + | chr3.4:38949791-38949810 | MS.gene22252:intron | 30.0% | |
| ATTGAAAACTAGAGTAATGG+AGG | - | chr3.4:38949180-38949199 | None:intergenic | 30.0% | |
| CAAAATACAGACAAGAGAAA+GGG | - | chr3.4:38945166-38945185 | None:intergenic | 30.0% | |
| CATTGAGCTAACATTCTTAT+TGG | + | chr3.4:38948758-38948777 | MS.gene22252:intron | 30.0% | |
| CGTGTTCAATTTCTAATTGA+AGG | + | chr3.4:38946844-38946863 | MS.gene22252:CDS | 30.0% | |
| GAAAGTAAGAAGAAAGATGA+AGG | + | chr3.4:38944350-38944369 | MS.gene22252:CDS | 30.0% | |
| GATAAAAGCAATAAAAACCC+AGG | - | chr3.4:38948620-38948639 | None:intergenic | 30.0% | |
| GTAAAGAAACCAATAGTTGA+TGG | - | chr3.4:38946126-38946145 | None:intergenic | 30.0% | |
| GTATGCATAAATTTGTACAG+AGG | - | chr3.4:38946668-38946687 | None:intergenic | 30.0% | |
| GTTATATCACTATTGCATAG+CGG | + | chr3.4:38947056-38947075 | MS.gene22252:intron | 30.0% | |
| TAAGAAGAGGAATTTGGATA+GGG | + | chr3.4:38944181-38944200 | MS.gene22252:CDS | 30.0% | |
| TATCATGACAACTGCAAAAA+TGG | - | chr3.4:38946580-38946599 | None:intergenic | 30.0% | |
| TCAAAATACAGACAAGAGAA+AGG | - | chr3.4:38945167-38945186 | None:intergenic | 30.0% | |
| TCTTAACAACAGTAATAGCT+TGG | + | chr3.4:38948534-38948553 | MS.gene22252:intron | 30.0% | |
| TGCATGTTGCATGAATATAT+TGG | + | chr3.4:38949788-38949807 | MS.gene22252:intron | 30.0% | |
| TGTTCTCTTATATCATGTGT+GGG | + | chr3.4:38949882-38949901 | MS.gene22252:intron | 30.0% | |
| TTCAAATCAAATGGACGAAA+TGG | - | chr3.4:38949021-38949040 | None:intergenic | 30.0% | |
| TTGTTCTCTTATATCATGTG+TGG | + | chr3.4:38949881-38949900 | MS.gene22252:intron | 30.0% | |
| TTTCATTCTCCAGATAATTG+GGG | - | chr3.4:38947438-38947457 | None:intergenic | 30.0% | |
| TTTGGGAGTAGTGTATATAA+GGG | + | chr3.4:38946177-38946196 | MS.gene22252:intron | 30.0% | |
| ! | AAAGAAACCAATAGTTGATG+GGG | - | chr3.4:38946124-38946143 | None:intergenic | 30.0% |
| ! | AAAGTAAGTTTTTCCAACAG+GGG | + | chr3.4:38946535-38946554 | MS.gene22252:intron | 30.0% |
| ! | AAGTTGATCGAAAAAGGAAT+AGG | + | chr3.4:38943982-38944001 | MS.gene22252:CDS | 30.0% |
| ! | ACAGAATCAGTGTTGTTAAA+TGG | + | chr3.4:38946945-38946964 | MS.gene22252:intron | 30.0% |
| ! | ACATTGTCAACTCTTTTGTA+TGG | + | chr3.4:38947131-38947150 | MS.gene22252:intron | 30.0% |
| ! | AGAAAGTAAGTTTTTCCAAC+AGG | + | chr3.4:38946533-38946552 | MS.gene22252:intron | 30.0% |
| ! | AGTGTATATAAGGGTATAAC+TGG | + | chr3.4:38946186-38946205 | MS.gene22252:intron | 30.0% |
| ! | ATAATGATAATGAGAAGGAC+AGG | + | chr3.4:38944234-38944253 | MS.gene22252:CDS | 30.0% |
| ! | ATATAAGGGTATAACTGGAA+AGG | + | chr3.4:38946191-38946210 | MS.gene22252:intron | 30.0% |
| ! | CTTTTCATTCTCCAGATAAT+TGG | - | chr3.4:38947440-38947459 | None:intergenic | 30.0% |
| ! | GAAAGTAAGTTTTTCCAACA+GGG | + | chr3.4:38946534-38946553 | MS.gene22252:intron | 30.0% |
| ! | GAGTTTTACTGGTGAAAAAA+AGG | - | chr3.4:38949615-38949634 | None:intergenic | 30.0% |
| ! | GAGTTTTCCCTTTAACTATA+TGG | + | chr3.4:38945095-38945114 | MS.gene22252:intron | 30.0% |
| ! | GCATCATTTTCACAAATACA+CGG | - | chr3.4:38946718-38946737 | None:intergenic | 30.0% |
| ! | GTCATGATATGTTTAGAACT+GGG | + | chr3.4:38946591-38946610 | MS.gene22252:intron | 30.0% |
| ! | TGTCATGATATGTTTAGAAC+TGG | + | chr3.4:38946590-38946609 | MS.gene22252:intron | 30.0% |
| ! | TTAGTAGACCAATGTTTTTC+TGG | + | chr3.4:38949540-38949559 | MS.gene22252:intron | 30.0% |
| ! | TTCACAAAGTACTAATACCA+GGG | + | chr3.4:38945633-38945652 | MS.gene22252:intron | 30.0% |
| ! | TTCTCAAAAAACAAAGGTAC+GGG | - | chr3.4:38946021-38946040 | None:intergenic | 30.0% |
| ! | TTTATTATCAGACTAGCCAA+TGG | + | chr3.4:38948846-38948865 | MS.gene22252:intron | 30.0% |
| ! | TTTCACAAAGTACTAATACC+AGG | + | chr3.4:38945632-38945651 | MS.gene22252:intron | 30.0% |
| !! | AAGGAAGAGTATTAATGGAT+TGG | + | chr3.4:38944541-38944560 | MS.gene22252:CDS | 30.0% |
| !! | AATAGTTGATGGGGATAATT+TGG | - | chr3.4:38946115-38946134 | None:intergenic | 30.0% |
| !! | ACACTCATTTTGAAAACAGA+GGG | + | chr3.4:38946281-38946300 | MS.gene22252:intron | 30.0% |
| !! | AGAATATTATGGTGGATGAA+TGG | - | chr3.4:38948727-38948746 | None:intergenic | 30.0% |
| !! | ATTTCATTTTTCAATGCTGC+AGG | + | chr3.4:38949963-38949982 | MS.gene22252:intron | 30.0% |
| !! | CACTTATGCTTTTAACTACT+GGG | + | chr3.4:38948569-38948588 | MS.gene22252:intron | 30.0% |
| !! | GAATATTATGGTGGATGAAT+GGG | - | chr3.4:38948726-38948745 | None:intergenic | 30.0% |
| !! | GCTTTAAGGAAGAGTATTAA+TGG | + | chr3.4:38944536-38944555 | MS.gene22252:CDS | 30.0% |
| !! | TCAAAATGAGTGTCACTTTA+GGG | - | chr3.4:38946274-38946293 | None:intergenic | 30.0% |
| !! | TCACTTATGCTTTTAACTAC+TGG | + | chr3.4:38948568-38948587 | MS.gene22252:intron | 30.0% |
| !! | TTCAAAATGAGTGTCACTTT+AGG | - | chr3.4:38946275-38946294 | None:intergenic | 30.0% |
| !! | TTTTGAATCCATTTTTCCCA+AGG | + | chr3.4:38950053-38950072 | MS.gene22252:CDS | 30.0% |
| !! | TTTTGGGAGTAGTGTATATA+AGG | + | chr3.4:38946176-38946195 | MS.gene22252:intron | 30.0% |
| !!! | AAGTTGGTGATCTTTTACTT+AGG | + | chr3.4:38944738-38944757 | MS.gene22252:CDS | 30.0% |
| !!! | AATTTTTTGCTCATTTGCTC+GGG | + | chr3.4:38948002-38948021 | MS.gene22252:CDS | 30.0% |
| !!! | TCCATTACTCTAGTTTTCAA+TGG | + | chr3.4:38949179-38949198 | MS.gene22252:intron | 30.0% |
| AAAGCAATAAAAACCCAGGA+AGG | - | chr3.4:38948616-38948635 | None:intergenic | 35.0% | |
| AAATCAAATGGACGAAATGG+AGG | - | chr3.4:38949018-38949037 | None:intergenic | 35.0% | |
| AACGTGATGTGAAGAGAATT+AGG | + | chr3.4:38944054-38944073 | MS.gene22252:CDS | 35.0% | |
| AACGTTGGGTTCAAATCAAA+TGG | - | chr3.4:38949030-38949049 | None:intergenic | 35.0% | |
| AACTATAAAGCAGCGGAATT+TGG | + | chr3.4:38946971-38946990 | MS.gene22252:intron | 35.0% | |
| AAGAAGAAAGATGAAGGAAG+TGG | + | chr3.4:38944356-38944375 | MS.gene22252:CDS | 35.0% | |
| AATATATTGGTGGAGCAGTT+TGG | + | chr3.4:38949801-38949820 | MS.gene22252:intron | 35.0% | |
| ACACAAGACATGATACACTT+AGG | - | chr3.4:38948702-38948721 | None:intergenic | 35.0% | |
| ACGTGATGTGAAGAGAATTA+GGG | + | chr3.4:38944055-38944074 | MS.gene22252:CDS | 35.0% | |
| AGAAGAAAGATGAAGGAAGT+GGG | + | chr3.4:38944357-38944376 | MS.gene22252:CDS | 35.0% | |
| AGACTAATCTTGTCAATCTG+CGG | + | chr3.4:38947599-38947618 | MS.gene22252:CDS | 35.0% | |
| AGCTTAGCTAAAAAACCACT+GGG | - | chr3.4:38949455-38949474 | None:intergenic | 35.0% | |
| AGCTTCTTCATTCTCTTCAT+CGG | - | chr3.4:38947557-38947576 | None:intergenic | 35.0% | |
| AGGGATAGAGTTGAAAAGAA+TGG | + | chr3.4:38944308-38944327 | MS.gene22252:CDS | 35.0% | |
| AGTAAAAGATCACCAACTTG+AGG | - | chr3.4:38944737-38944756 | None:intergenic | 35.0% | |
| AGTAGTTTGAAGGATGACTA+AGG | + | chr3.4:38946304-38946323 | MS.gene22252:intron | 35.0% | |
| ATATATGATAAGACGTGCCA+AGG | - | chr3.4:38948040-38948059 | None:intergenic | 35.0% | |
| ATCATCCTCGCTAACTTAAA+CGG | - | chr3.4:38944464-38944483 | None:intergenic | 35.0% | |
| ATCGAAAAAGGAATAGGGAT+AGG | + | chr3.4:38943988-38944007 | MS.gene22252:CDS | 35.0% | |
| ATCTGCCATAAACAACATCA+TGG | - | chr3.4:38949062-38949081 | None:intergenic | 35.0% | |
| ATGATTGTGTTGCACTTACA+GGG | + | chr3.4:38947192-38947211 | MS.gene22252:intron | 35.0% | |
| ATGTGAAGAGAATTAGGGAT+AGG | + | chr3.4:38944060-38944079 | MS.gene22252:CDS | 35.0% | |
| ATGTGACAATTGTGCAAGAA+AGG | + | chr3.4:38945752-38945771 | MS.gene22252:intron | 35.0% | |
| ATTGCAATAGTTGCAGTTCT+AGG | - | chr3.4:38945803-38945822 | None:intergenic | 35.0% | |
| ATTTATTTGTTTCGAGCCTG+TGG | - | chr3.4:38947967-38947986 | None:intergenic | 35.0% | |
| CAAAATACTTCCTTGAGAGA+TGG | - | chr3.4:38949339-38949358 | None:intergenic | 35.0% | |
| CATAAGAAAGGCAAAGTTTC+AGG | + | chr3.4:38946876-38946895 | MS.gene22252:CDS | 35.0% | |
| CATGGGAGATATAAAACGTT+GGG | - | chr3.4:38949044-38949063 | None:intergenic | 35.0% | |
| CGATCCATCATAGGATATTA+TGG | - | chr3.4:38948493-38948512 | None:intergenic | 35.0% | |
| CGGCATTTCTCAAAAAACAA+AGG | - | chr3.4:38946027-38946046 | None:intergenic | 35.0% | |
| CTGAAACTTTGCCTTTCTTA+TGG | - | chr3.4:38946878-38946897 | None:intergenic | 35.0% | |
| GATAGAGTTGAAAAGAATGG+TGG | + | chr3.4:38944311-38944330 | MS.gene22252:CDS | 35.0% | |
| GATGCCATAATATCCTATGA+TGG | + | chr3.4:38948486-38948505 | MS.gene22252:intron | 35.0% | |
| GCCATTGAAAACTAGAGTAA+TGG | - | chr3.4:38949183-38949202 | None:intergenic | 35.0% | |
| GTAAAATTGGAAAACACGCA+AGG | - | chr3.4:38944825-38944844 | None:intergenic | 35.0% | |
| TAGAATCAGTTAAGGGATTC+AGG | - | chr3.4:38946416-38946435 | None:intergenic | 35.0% | |
| TATAATTCCGGAGTTGTTTG+CGG | + | chr3.4:38944595-38944614 | MS.gene22252:CDS | 35.0% | |
| TCAGATATTACGGTCTTCTA+GGG | + | chr3.4:38947867-38947886 | MS.gene22252:CDS | 35.0% | |
| TCATGGGAGATATAAAACGT+TGG | - | chr3.4:38949045-38949064 | None:intergenic | 35.0% | |
| TCGAAAAAGGAATAGGGATA+GGG | + | chr3.4:38943989-38944008 | MS.gene22252:CDS | 35.0% | |
| TCTGCCATAAACAACATCAT+GGG | - | chr3.4:38949061-38949080 | None:intergenic | 35.0% | |
| TGTGAAGAGAATTAGGGATA+GGG | + | chr3.4:38944061-38944080 | MS.gene22252:CDS | 35.0% | |
| TGTTGTCAAATCACAGATAG+CGG | - | chr3.4:38947105-38947124 | None:intergenic | 35.0% | |
| TTAACCTCTCATTTAGCAAC+CGG | - | chr3.4:38950011-38950030 | None:intergenic | 35.0% | |
| TTGCTCCGAGAAAAGAAAAA+GGG | + | chr3.4:38945862-38945881 | MS.gene22252:intron | 35.0% | |
| TTGGTAAAATCTGTGTTGCA+CGG | - | chr3.4:38946096-38946115 | None:intergenic | 35.0% | |
| TTTAAACCTTGGTACGGTTA+CGG | + | chr3.4:38945575-38945594 | MS.gene22252:intron | 35.0% | |
| TTTATATGTTCAGCCTTCCT+GGG | + | chr3.4:38948600-38948619 | MS.gene22252:intron | 35.0% | |
| TTTATGTACCCAACCTTAAG+TGG | - | chr3.4:38948461-38948480 | None:intergenic | 35.0% | |
| TTTGCTCCGAGAAAAGAAAA+AGG | + | chr3.4:38945861-38945880 | MS.gene22252:intron | 35.0% | |
| ! | AAGGATGGGCAAAACTATTT+TGG | - | chr3.4:38949300-38949319 | None:intergenic | 35.0% |
| ! | AATGTCCAGTGTAGATTTTG+AGG | + | chr3.4:38947642-38947661 | MS.gene22252:CDS | 35.0% |
| ! | AGAATTTGATTCGTGGAAGA+GGG | + | chr3.4:38944618-38944637 | MS.gene22252:CDS | 35.0% |
| ! | AGACAATGATTTTCCTCTCA+AGG | + | chr3.4:38945726-38945745 | MS.gene22252:intron | 35.0% |
| ! | AGGAAGAAGTTGATCGAAAA+AGG | + | chr3.4:38943976-38943995 | MS.gene22252:CDS | 35.0% |
| ! | ATCTCCCATGATGTTGTTTA+TGG | + | chr3.4:38949054-38949073 | MS.gene22252:intron | 35.0% |
| ! | ATGCAGAATCGTGTGTTTTT+AGG | - | chr3.4:38950084-38950103 | None:intergenic | 35.0% |
| ! | CATTCACAAGTGAGTTTTAC+TGG | - | chr3.4:38949626-38949645 | None:intergenic | 35.0% |
| ! | CATTTTCACAAATACACGGA+TGG | - | chr3.4:38946714-38946733 | None:intergenic | 35.0% |
| ! | GCTATCCCTTTTTCTTTTCT+CGG | - | chr3.4:38945870-38945889 | None:intergenic | 35.0% |
| ! | GGCTTGTATTTCTGAAAACA+TGG | + | chr3.4:38945221-38945240 | MS.gene22252:intron | 35.0% |
| ! | TCACAAAGTACTAATACCAG+GGG | + | chr3.4:38945634-38945653 | MS.gene22252:intron | 35.0% |
| ! | TCCCTTAACTGATTCTACTT+CGG | + | chr3.4:38946419-38946438 | MS.gene22252:intron | 35.0% |
| ! | TTTTATATGTTCAGCCTTCC+TGG | + | chr3.4:38948599-38948618 | MS.gene22252:intron | 35.0% |
| ! | TTTTTCCAACAGGGGTTATA+AGG | + | chr3.4:38946543-38946562 | MS.gene22252:intron | 35.0% |
| !! | ACTATTTTATTGTTTGGGGC+AGG | + | chr3.4:38946902-38946921 | MS.gene22252:intron | 35.0% |
| !! | ACTGCAAAAATGGTTTTGCT+TGG | - | chr3.4:38946570-38946589 | None:intergenic | 35.0% |
| !! | ATGCAGAAGTATTCTAATGC+AGG | + | chr3.4:38946688-38946707 | MS.gene22252:intron | 35.0% |
| !! | CAAAATGAGTGTCACTTTAG+GGG | - | chr3.4:38946273-38946292 | None:intergenic | 35.0% |
| !! | CTGCAAAAATGGTTTTGCTT+GGG | - | chr3.4:38946569-38946588 | None:intergenic | 35.0% |
| !! | GACACTCATTTTGAAAACAG+AGG | + | chr3.4:38946280-38946299 | MS.gene22252:intron | 35.0% |
| !! | GTTTTGTTCTTTTGTTTGCG+AGG | - | chr3.4:38948402-38948421 | None:intergenic | 35.0% |
| !! | TAATATCCTATGATGGATCG+TGG | + | chr3.4:38948493-38948512 | MS.gene22252:intron | 35.0% |
| !! | TGCAGAATCGTGTGTTTTTA+GGG | - | chr3.4:38950083-38950102 | None:intergenic | 35.0% |
| !! | TTGGTGATCTTTTACTTAGG+AGG | + | chr3.4:38944741-38944760 | MS.gene22252:CDS | 35.0% |
| !! | TTGGTGGTTTGCTAGAAAAT+AGG | + | chr3.4:38946335-38946354 | MS.gene22252:intron | 35.0% |
| !! | TTTTTCACATCCATTGGTCT+TGG | + | chr3.4:38950108-38950127 | MS.gene22252:CDS | 35.0% |
| !!! | TAATTTTACCCTCTGAAGCA+CGG | + | chr3.4:38945443-38945462 | MS.gene22252:intron | 35.0% |
| AAACAGAGGGAGTAGTTTGA+AGG | + | chr3.4:38946294-38946313 | MS.gene22252:intron | 40.0% | |
| AAAGGAATAGGGATAGGGAT+AGG | + | chr3.4:38943994-38944013 | MS.gene22252:CDS | 40.0% | |
| AAATTCTCCGCAAACAACTC+CGG | - | chr3.4:38944605-38944624 | None:intergenic | 40.0% | |
| AACACGAAGTTTCCTCAAGT+TGG | + | chr3.4:38944722-38944741 | MS.gene22252:CDS | 40.0% | |
| AACAGCCTAAATAGCAGCAT+TGG | - | chr3.4:38949229-38949248 | None:intergenic | 40.0% | |
| AACGAATCTCCAAACTGCTA+TGG | - | chr3.4:38949744-38949763 | None:intergenic | 40.0% | |
| AAGAACCCTTATACCTTCGA+CGG | - | chr3.4:38944025-38944044 | None:intergenic | 40.0% | |
| AAGCTCCGATTCATCAGATT+CGG | + | chr3.4:38950233-38950252 | MS.gene22252:CDS | 40.0% | |
| AAGGAATAGGGATAGGGATA+GGG | + | chr3.4:38943995-38944014 | MS.gene22252:CDS | 40.0% | |
| AATGGAACCTATGCTCATCA+TGG | + | chr3.4:38948864-38948883 | MS.gene22252:intron | 40.0% | |
| AATGGCGATGCATCTAAGTT+AGG | + | chr3.4:38944413-38944432 | MS.gene22252:CDS | 40.0% | |
| AATTTCTCACCCATCTCTCA+AGG | + | chr3.4:38949326-38949345 | MS.gene22252:intron | 40.0% | |
| AGAGGAATTTGGATAGGGAA+AGG | + | chr3.4:38944186-38944205 | MS.gene22252:CDS | 40.0% | |
| AGAGTTGAAGAAAAGCTTGC+TGG | + | chr3.4:38947468-38947487 | MS.gene22252:CDS | 40.0% | |
| AGCAAATACATCCGTAAACC+CGG | - | chr3.4:38944684-38944703 | None:intergenic | 40.0% | |
| AGCAGTATTCATTGATCCAC+AGG | + | chr3.4:38947948-38947967 | MS.gene22252:CDS | 40.0% | |
| AGCGTATAAGCGTAATGACA+AGG | + | chr3.4:38944784-38944803 | MS.gene22252:CDS | 40.0% | |
| AGGATCTATTTCCTCATCCA+AGG | - | chr3.4:38947283-38947302 | None:intergenic | 40.0% | |
| AGTTGACGATAAGAGTAGTC+CGG | + | chr3.4:38944490-38944509 | MS.gene22252:CDS | 40.0% | |
| ATACCGGCAAGTGTGATAAA+TGG | + | chr3.4:38944395-38944414 | MS.gene22252:CDS | 40.0% | |
| ATATCATGTGTGGGATGTAC+TGG | + | chr3.4:38949891-38949910 | MS.gene22252:intron | 40.0% | |
| ATCATATATTCGCCTGACTG+AGG | + | chr3.4:38948051-38948070 | MS.gene22252:CDS | 40.0% | |
| ATCGTGTATGAAGTCACAGA+TGG | + | chr3.4:38944652-38944671 | MS.gene22252:CDS | 40.0% | |
| ATGACGATGATAGGAGGAAT+GGG | + | chr3.4:38944279-38944298 | MS.gene22252:CDS | 40.0% | |
| ATGATGAGCATAGGTTCCAT+TGG | - | chr3.4:38948865-38948884 | None:intergenic | 40.0% | |
| ATGGAACCTATGCTCATCAT+GGG | + | chr3.4:38948865-38948884 | MS.gene22252:intron | 40.0% | |
| ATGGCGATGCATCTAAGTTA+GGG | + | chr3.4:38944414-38944433 | MS.gene22252:CDS | 40.0% | |
| ATGGTGCAACTATAAAGCAG+CGG | + | chr3.4:38946964-38946983 | MS.gene22252:intron | 40.0% | |
| ATTCTCCAGATAATTGGGGT+CGG | - | chr3.4:38947434-38947453 | None:intergenic | 40.0% | |
| ATTGTCACATAAGCCTTGAG+AGG | - | chr3.4:38945742-38945761 | None:intergenic | 40.0% | |
| CCCGAAGTAGAATCAGTTAA+GGG | - | chr3.4:38946423-38946442 | None:intergenic | 40.0% | |
| CGTATCTTCCATACAAAGAG+AGG | - | chr3.4:38949930-38949949 | None:intergenic | 40.0% | |
| CTAAAAATCCATCTTGAGCC+AGG | + | chr3.4:38947682-38947701 | MS.gene22252:CDS | 40.0% | |
| CTAAGTTAGGGAAAAGTGGA+GGG | + | chr3.4:38944426-38944445 | MS.gene22252:CDS | 40.0% | |
| CTCAGATATTACGGTCTTCT+AGG | + | chr3.4:38947866-38947885 | MS.gene22252:CDS | 40.0% | |
| GAATTAGGGATAGGGAAAGA+AGG | + | chr3.4:38944069-38944088 | MS.gene22252:CDS | 40.0% | |
| GAGCTTAGCTAAAAAACCAC+TGG | - | chr3.4:38949456-38949475 | None:intergenic | 40.0% | |
| GATGACTAAGGCATGATGAT+TGG | + | chr3.4:38946316-38946335 | MS.gene22252:intron | 40.0% | |
| GATGATTGTGTTGCACTTAC+AGG | + | chr3.4:38947191-38947210 | MS.gene22252:intron | 40.0% | |
| GCAAGTTTCAGATTCTGACT+CGG | + | chr3.4:38950197-38950216 | MS.gene22252:CDS | 40.0% | |
| GCATCTAAGTTAGGGAAAAG+TGG | + | chr3.4:38944422-38944441 | MS.gene22252:CDS | 40.0% | |
| GCTTAGCTAAAAAACCACTG+GGG | - | chr3.4:38949454-38949473 | None:intergenic | 40.0% | |
| GGATTCAAAAGAATCCTGCA+TGG | - | chr3.4:38950043-38950062 | None:intergenic | 40.0% | |
| GTTAAATGATCCAACCATGC+AGG | + | chr3.4:38950026-38950045 | MS.gene22252:CDS | 40.0% | |
| TAAGTTAGCGAGGATGATGA+AGG | + | chr3.4:38944466-38944485 | MS.gene22252:CDS | 40.0% | |
| TAAGTTAGGGAAAAGTGGAG+GGG | + | chr3.4:38944427-38944446 | MS.gene22252:CDS | 40.0% | |
| TACTGGTGAAAAAAAGGTCG+AGG | - | chr3.4:38949609-38949628 | None:intergenic | 40.0% | |
| TATTCACGCCTCTCTTTGTA+TGG | + | chr3.4:38949919-38949938 | MS.gene22252:intron | 40.0% | |
| TCAAAAGAATCCTGCATGGT+TGG | - | chr3.4:38950039-38950058 | None:intergenic | 40.0% | |
| TCCAAAGAAAAGAGAGGACA+AGG | + | chr3.4:38948373-38948392 | MS.gene22252:intron | 40.0% | |
| TCGTCGGTATAAGGATGATT+CGG | + | chr3.4:38944145-38944164 | MS.gene22252:CDS | 40.0% | |
| TCTAAGTTAGGGAAAAGTGG+AGG | + | chr3.4:38944425-38944444 | MS.gene22252:CDS | 40.0% | |
| TGCTTCCTCAAAATCTACAC+TGG | - | chr3.4:38947650-38947669 | None:intergenic | 40.0% | |
| TGGTAAAATCTGTGTTGCAC+GGG | - | chr3.4:38946095-38946114 | None:intergenic | 40.0% | |
| TGTATGAAATGTTGCCACTG+CGG | + | chr3.4:38949252-38949271 | MS.gene22252:intron | 40.0% | |
| TGTGAAGTTTGTAGCACATC+TGG | + | chr3.4:38944920-38944939 | MS.gene22252:CDS | 40.0% | |
| TGTTGTTGCATGATCATCCT+TGG | - | chr3.4:38950174-38950193 | None:intergenic | 40.0% | |
| TTCACAGCAGCAAGTAATTG+AGG | - | chr3.4:38944906-38944925 | None:intergenic | 40.0% | |
| TTCCTGAACAAGTGACAACA+TGG | + | chr3.4:38948912-38948931 | MS.gene22252:intron | 40.0% | |
| TTGAGTTCGATTCAAGTACC+TGG | - | chr3.4:38948120-38948139 | None:intergenic | 40.0% | |
| TTTCGTGGAATTCTGCATGA+AGG | + | chr3.4:38946808-38946827 | MS.gene22252:CDS | 40.0% | |
| ! | AAAGGAGGCATAGAGTTGAT+AGG | + | chr3.4:38944204-38944223 | MS.gene22252:CDS | 40.0% |
| ! | AGAATGGTGGTGATAATGAG+AGG | + | chr3.4:38944324-38944343 | MS.gene22252:CDS | 40.0% |
| ! | ATCTGAGATAAGTTCTCTCC+TGG | - | chr3.4:38947853-38947872 | None:intergenic | 40.0% |
| ! | ATTGTGCAAGAAAGGCATGA+AGG | + | chr3.4:38945760-38945779 | MS.gene22252:intron | 40.0% |
| ! | CAAGAAAGGCATGAAGGAAA+AGG | + | chr3.4:38945766-38945785 | MS.gene22252:intron | 40.0% |
| ! | CCCTTAACTGATTCTACTTC+GGG | + | chr3.4:38946420-38946439 | MS.gene22252:intron | 40.0% |
| ! | CCTTAACTGATTCTACTTCG+GGG | + | chr3.4:38946421-38946440 | MS.gene22252:intron | 40.0% |
| ! | GAATGGTGGTGATAATGAGA+GGG | + | chr3.4:38944325-38944344 | MS.gene22252:CDS | 40.0% |
| ! | GAGAATTTGATTCGTGGAAG+AGG | + | chr3.4:38944617-38944636 | MS.gene22252:CDS | 40.0% |
| ! | GAGTTGAAGAAAAGCTTGCT+GGG | + | chr3.4:38947469-38947488 | MS.gene22252:CDS | 40.0% |
| ! | GATAACCGTCGAAGGTATAA+GGG | + | chr3.4:38944017-38944036 | MS.gene22252:CDS | 40.0% |
| ! | GCATACCAATGCTGCTATTT+AGG | + | chr3.4:38949221-38949240 | MS.gene22252:intron | 40.0% |
| ! | GTATAAGGATGATTCGGATG+AGG | + | chr3.4:38944151-38944170 | MS.gene22252:CDS | 40.0% |
| ! | TACGGGTACGTTTTGCAAAT+TGG | - | chr3.4:38945474-38945493 | None:intergenic | 40.0% |
| ! | TCCTTGTCCTCTCTTTTCTT+TGG | - | chr3.4:38948377-38948396 | None:intergenic | 40.0% |
| ! | TGCAAGTTGGGAACAAATGA+GGG | - | chr3.4:38949431-38949450 | None:intergenic | 40.0% |
| ! | TTCCATGTTGTCACTTGTTC+AGG | - | chr3.4:38948917-38948936 | None:intergenic | 40.0% |
| ! | TTGTGTGTCATTGATGCAGA+TGG | + | chr3.4:38947796-38947815 | MS.gene22252:intron | 40.0% |
| ! | TTTGCGGAGAATTTGATTCG+TGG | + | chr3.4:38944611-38944630 | MS.gene22252:CDS | 40.0% |
| !! | AAGGAGGCATAGAGTTGATA+GGG | + | chr3.4:38944205-38944224 | MS.gene22252:CDS | 40.0% |
| !! | AGTGTAGATTTTGAGGAAGC+AGG | + | chr3.4:38947649-38947668 | MS.gene22252:CDS | 40.0% |
| !!! | AATTTTACCCTCTGAAGCAC+GGG | + | chr3.4:38945444-38945463 | MS.gene22252:intron | 40.0% |
| !!! | GTGTTTTTAGGGTTGTCCTT+GGG | - | chr3.4:38950072-38950091 | None:intergenic | 40.0% |
| !!! | GTTGGTTTTGTGACAGAATG+TGG | + | chr3.4:38945032-38945051 | MS.gene22252:CDS | 40.0% |
| !!! | TGTGTTTTTAGGGTTGTCCT+TGG | - | chr3.4:38950073-38950092 | None:intergenic | 40.0% |
| AACTCACCATGAAGTCCTCT+CGG | - | chr3.4:38945080-38945099 | None:intergenic | 45.0% | |
| AATGTACCAAGGGAAGTCTC+AGG | - | chr3.4:38947303-38947322 | None:intergenic | 45.0% | |
| ACTCATGCCCAAAACAACTG+GGG | + | chr3.4:38948640-38948659 | MS.gene22252:intron | 45.0% | |
| ACTCATTCCAGTGGCATCAA+TGG | - | chr3.4:38949151-38949170 | None:intergenic | 45.0% | |
| ACTTCAACACTGTCATCGGA+AGG | - | chr3.4:38945008-38945027 | None:intergenic | 45.0% | |
| ACTTGACTCTGACTCAGAAC+TGG | - | chr3.4:38950262-38950281 | None:intergenic | 45.0% | |
| AGAAGGACAGGAAGAGAGAA+AGG | + | chr3.4:38944246-38944265 | MS.gene22252:CDS | 45.0% | |
| AGCCACTTCAACACTGTCAT+CGG | - | chr3.4:38945012-38945031 | None:intergenic | 45.0% | |
| AGCTCCGATTCATCAGATTC+GGG | + | chr3.4:38950234-38950253 | MS.gene22252:CDS | 45.0% | |
| AGGATCTCAACTCATTCCAG+TGG | - | chr3.4:38949160-38949179 | None:intergenic | 45.0% | |
| AGGCACTAGTTAGACTTGGA+TGG | - | chr3.4:38949583-38949602 | None:intergenic | 45.0% | |
| AGGCATGGCCAGAAAAACAT+TGG | - | chr3.4:38949551-38949570 | None:intergenic | 45.0% | |
| AGGGTTGTCCTTGGGAAAAA+TGG | - | chr3.4:38950064-38950083 | None:intergenic | 45.0% | |
| AGTAAGACCACCAAGACCAA+TGG | - | chr3.4:38950121-38950140 | None:intergenic | 45.0% | |
| AGTACTAATACCAGGGGAGT+AGG | + | chr3.4:38945640-38945659 | MS.gene22252:intron | 45.0% | |
| ATAGAGCCACGATCCATCAT+AGG | - | chr3.4:38948502-38948521 | None:intergenic | 45.0% | |
| ATAGATCCTGAGACTTCCCT+TGG | + | chr3.4:38947294-38947313 | MS.gene22252:CDS | 45.0% | |
| ATCCTCGCTAACTTAAACGG+CGG | - | chr3.4:38944461-38944480 | None:intergenic | 45.0% | |
| ATGTACCCAACCTTAAGTGG+TGG | - | chr3.4:38948458-38948477 | None:intergenic | 45.0% | |
| ATTGCCAACTGAAGCTGGAA+TGG | - | chr3.4:38949127-38949146 | None:intergenic | 45.0% | |
| CAAATGGACGAAATGGAGGA+AGG | - | chr3.4:38949014-38949033 | None:intergenic | 45.0% | |
| CAAGTCAACCTCTGATACTC+CGG | - | chr3.4:38944512-38944531 | None:intergenic | 45.0% | |
| CACTCATGCCCAAAACAACT+GGG | + | chr3.4:38948639-38948658 | MS.gene22252:intron | 45.0% | |
| CCCCGAAGTAGAATCAGTTA+AGG | - | chr3.4:38946424-38946443 | None:intergenic | 45.0% | |
| CCTACTTGAATCAGCAAGCT+AGG | - | chr3.4:38949502-38949521 | None:intergenic | 45.0% | |
| CTAATCTTGTCAATCTGCGG+CGG | + | chr3.4:38947602-38947621 | MS.gene22252:CDS | 45.0% | |
| GAAGGACAGGAAGAGAGAAA+GGG | + | chr3.4:38944247-38944266 | MS.gene22252:CDS | 45.0% | |
| GACTAAGGCATGATGATTGG+TGG | + | chr3.4:38946319-38946338 | MS.gene22252:intron | 45.0% | |
| GACTTGGATGGAACTAAGCA+AGG | - | chr3.4:38949571-38949590 | None:intergenic | 45.0% | |
| GATGACGATGATAGGAGGAA+TGG | + | chr3.4:38944278-38944297 | MS.gene22252:CDS | 45.0% | |
| GCAAATACATCCGTAAACCC+GGG | - | chr3.4:38944683-38944702 | None:intergenic | 45.0% | |
| GGAATTTGGATAGGGAAAGG+AGG | + | chr3.4:38944189-38944208 | MS.gene22252:CDS | 45.0% | |
| GGTTCCCGAATCTGATGAAT+CGG | - | chr3.4:38950241-38950260 | None:intergenic | 45.0% | |
| GTCCAAGAGGACATTGTAGA+CGG | + | chr3.4:38948802-38948821 | MS.gene22252:intron | 45.0% | |
| TACAGGGTTATCCAGCTGTT+CGG | + | chr3.4:38947208-38947227 | MS.gene22252:intron | 45.0% | |
| TACCGTCTACAATGTCCTCT+TGG | - | chr3.4:38948807-38948826 | None:intergenic | 45.0% | |
| TCAATGCTTACCTCTTGACC+TGG | - | chr3.4:38947703-38947722 | None:intergenic | 45.0% | |
| TCACTCATGCCCAAAACAAC+TGG | + | chr3.4:38948638-38948657 | MS.gene22252:intron | 45.0% | |
| TCGCCATTTATCACACTTGC+CGG | - | chr3.4:38944401-38944420 | None:intergenic | 45.0% | |
| TGAAAAAAAGGTCGAGGCTG+AGG | - | chr3.4:38949603-38949622 | None:intergenic | 45.0% | |
| TGACGATGATAGGAGGAATG+GGG | + | chr3.4:38944280-38944299 | MS.gene22252:CDS | 45.0% | |
| TGTACCCAACCTTAAGTGGT+GGG | - | chr3.4:38948457-38948476 | None:intergenic | 45.0% | |
| TGTTTATGGCAGATGATGCC+AGG | + | chr3.4:38949068-38949087 | MS.gene22252:intron | 45.0% | |
| TTCTCCAGATAATTGGGGTC+GGG | - | chr3.4:38947433-38947452 | None:intergenic | 45.0% | |
| TTGGGAACAAATGAGGGAGT+GGG | - | chr3.4:38949425-38949444 | None:intergenic | 45.0% | |
| TTTGCAAAACGTACCCGTAC+CGG | + | chr3.4:38945475-38945494 | MS.gene22252:intron | 45.0% | |
| ! | AAAGAAGGCATAGGGCTGAT+AGG | + | chr3.4:38944084-38944103 | MS.gene22252:CDS | 45.0% |
| ! | AACAAAGGTACGGGTACGTT+AGG | - | chr3.4:38946012-38946031 | None:intergenic | 45.0% |
| ! | AAGAAGGCATAGGGCTGATA+GGG | + | chr3.4:38944085-38944104 | MS.gene22252:CDS | 45.0% |
| ! | ATTTTGGACTTGTGCCTGCA+GGG | - | chr3.4:38949284-38949303 | None:intergenic | 45.0% |
| ! | CAGGAATTGTCAGAGCATCT+AGG | + | chr3.4:38949982-38950001 | MS.gene22252:intron | 45.0% |
| ! | GGAGTATCAGAGGTTGACTT+GGG | + | chr3.4:38944511-38944530 | MS.gene22252:CDS | 45.0% |
| ! | GGATAACCGTCGAAGGTATA+AGG | + | chr3.4:38944016-38944035 | MS.gene22252:CDS | 45.0% |
| ! | GGATAGGGAAAGAAGGCATA+GGG | + | chr3.4:38944076-38944095 | MS.gene22252:CDS | 45.0% |
| ! | GGTATCTTTGAGCGTTTTCG+TGG | + | chr3.4:38946793-38946812 | MS.gene22252:intron | 45.0% |
| ! | GGTGGATGAAAGGTACACTT+GGG | - | chr3.4:38949106-38949125 | None:intergenic | 45.0% |
| ! | GTGCAAGTTGGGAACAAATG+AGG | - | chr3.4:38949432-38949451 | None:intergenic | 45.0% |
| ! | GTGGATGAAAGGTACACTTG+GGG | - | chr3.4:38949105-38949124 | None:intergenic | 45.0% |
| ! | TACGGATGTATTTGCTGCGA+TGG | + | chr3.4:38944688-38944707 | MS.gene22252:CDS | 45.0% |
| ! | TCGTGGTGGTGAAGATTTAG+AGG | + | chr3.4:38943956-38943975 | MS.gene22252:CDS | 45.0% |
| ! | TGGTGGATGAAAGGTACACT+TGG | - | chr3.4:38949107-38949126 | None:intergenic | 45.0% |
| ! | TTCCGATGACAGTGTTGAAG+TGG | + | chr3.4:38945007-38945026 | MS.gene22252:CDS | 45.0% |
| !! | AAGCTGGAATGGTGGATGAA+AGG | - | chr3.4:38949116-38949135 | None:intergenic | 45.0% |
| !! | ACTCTTGCCCCAGTTGTTTT+GGG | - | chr3.4:38948650-38948669 | None:intergenic | 45.0% |
| !! | CCTAGCTTGCTGATTCAAGT+AGG | + | chr3.4:38949499-38949518 | MS.gene22252:intron | 45.0% |
| !! | GGTTGACTTGGGATGCTTTA+AGG | + | chr3.4:38944522-38944541 | MS.gene22252:CDS | 45.0% |
| !! | TATTTTGGACTTGTGCCTGC+AGG | - | chr3.4:38949285-38949304 | None:intergenic | 45.0% |
| !! | TTCACATCCATTGGTCTTGG+TGG | + | chr3.4:38950111-38950130 | MS.gene22252:CDS | 45.0% |
| AAAACCACTGGGGTGCAAGT+TGG | - | chr3.4:38949444-38949463 | None:intergenic | 50.0% | |
| AAACCACTGGGGTGCAAGTT+GGG | - | chr3.4:38949443-38949462 | None:intergenic | 50.0% | |
| AAATCTGTGTTGCACGGGTG+CGG | - | chr3.4:38946090-38946109 | None:intergenic | 50.0% | |
| AGAAGGAAGTGAATCGTCCG+AGG | + | chr3.4:38943854-38943873 | MS.gene22252:CDS | 50.0% | |
| AGAATGTGGCTCAATGCTGC+AGG | + | chr3.4:38945046-38945065 | MS.gene22252:CDS | 50.0% | |
| AGTGAATCGTCCGAGGAAGA+AGG | + | chr3.4:38943861-38943880 | MS.gene22252:CDS | 50.0% | |
| ATAGGAGGAATGGGGAGAGA+AGG | + | chr3.4:38944288-38944307 | MS.gene22252:CDS | 50.0% | |
| ATCGACGCGATGACGATGAT+AGG | + | chr3.4:38944270-38944289 | MS.gene22252:CDS | 50.0% | |
| ATGGCATTGCCAACTGAAGC+TGG | - | chr3.4:38949132-38949151 | None:intergenic | 50.0% | |
| CAAACCCGACCCCAATTATC+TGG | + | chr3.4:38947426-38947445 | MS.gene22252:CDS | 50.0% | |
| CACCTAGCATTCAGTCCAAG+AGG | + | chr3.4:38948789-38948808 | MS.gene22252:intron | 50.0% | |
| CAGTGTGGCAGATTGCATTG+CGG | - | chr3.4:38949721-38949740 | None:intergenic | 50.0% | |
| CTCATCCAAGGAGACTTCGT+GGG | - | chr3.4:38947271-38947290 | None:intergenic | 50.0% | |
| CTCTTGGACTGAATGCTAGG+TGG | - | chr3.4:38948791-38948810 | None:intergenic | 50.0% | |
| CTTCACCACCACGATGTTTC+CGG | - | chr3.4:38943950-38943969 | None:intergenic | 50.0% | |
| GACGAAATGGAGGAAGGCTT+TGG | - | chr3.4:38949008-38949027 | None:intergenic | 50.0% | |
| GATAACCCACGAAGTCTCCT+TGG | + | chr3.4:38947263-38947282 | MS.gene22252:CDS | 50.0% | |
| GCAAGACAGCAGGCAAACAA+GGG | - | chr3.4:38949478-38949497 | None:intergenic | 50.0% | |
| GCATAGGGCTGATAGGGTTA+GGG | + | chr3.4:38944091-38944110 | MS.gene22252:CDS | 50.0% | |
| GCATCCGGTTGCTAAATGAG+AGG | + | chr3.4:38950004-38950023 | MS.gene22252:CDS | 50.0% | |
| GGATGGAACTAAGCAAGGCA+TGG | - | chr3.4:38949566-38949585 | None:intergenic | 50.0% | |
| GGTGAGGAAGAGGAATCAGA+GGG | + | chr3.4:38947490-38947509 | MS.gene22252:CDS | 50.0% | |
| GTACCCAACCTTAAGTGGTG+GGG | - | chr3.4:38948456-38948475 | None:intergenic | 50.0% | |
| GTCCTCTTGGACTGAATGCT+AGG | - | chr3.4:38948794-38948813 | None:intergenic | 50.0% | |
| GTGAATCGTCCGAGGAAGAA+GGG | + | chr3.4:38943862-38943881 | MS.gene22252:CDS | 50.0% | |
| GTTGGGAACAAATGAGGGAG+TGG | - | chr3.4:38949426-38949445 | None:intergenic | 50.0% | |
| TACCCAACCTTAAGTGGTGG+GGG | - | chr3.4:38948455-38948474 | None:intergenic | 50.0% | |
| TAGGAGGAATGGGGAGAGAA+GGG | + | chr3.4:38944289-38944308 | MS.gene22252:CDS | 50.0% | |
| TCCAAACTGCTATGGCAGTG+TGG | - | chr3.4:38949736-38949755 | None:intergenic | 50.0% | |
| TCCACCATTCCAGCTTCAGT+TGG | + | chr3.4:38949120-38949139 | MS.gene22252:intron | 50.0% | |
| TGATTCTACTTCGGGGTCTG+AGG | + | chr3.4:38946428-38946447 | MS.gene22252:intron | 50.0% | |
| TGCAAGACAGCAGGCAAACA+AGG | - | chr3.4:38949479-38949498 | None:intergenic | 50.0% | |
| TGCGGCTAGATCAATGACAG+AGG | - | chr3.4:38949703-38949722 | None:intergenic | 50.0% | |
| TGGTGTCCCATGATGAGCAT+AGG | - | chr3.4:38948874-38948893 | None:intergenic | 50.0% | |
| TTCCCCCACCACTTAAGGTT+GGG | + | chr3.4:38948450-38948469 | MS.gene22252:intron | 50.0% | |
| TTGCAAAACGTACCCGTACC+GGG | + | chr3.4:38945476-38945495 | MS.gene22252:intron | 50.0% | |
| TTGGTACGGTTACGGTACTG+CGG | + | chr3.4:38945583-38945602 | MS.gene22252:intron | 50.0% | |
| TTTCCCCCACCACTTAAGGT+TGG | + | chr3.4:38948449-38948468 | MS.gene22252:intron | 50.0% | |
| ! | AGAGTAGTCCGGAGTATCAG+AGG | + | chr3.4:38944501-38944520 | MS.gene22252:CDS | 50.0% |
| ! | CGGAGTATCAGAGGTTGACT+TGG | + | chr3.4:38944510-38944529 | MS.gene22252:CDS | 50.0% |
| ! | GACAGTGTTGAAGTGGCTGT+TGG | + | chr3.4:38945014-38945033 | MS.gene22252:CDS | 50.0% |
| ! | GACTCTTGCCCCAGTTGTTT+TGG | - | chr3.4:38948651-38948670 | None:intergenic | 50.0% |
| ! | GATGAAAGGTACACTTGGGG+CGG | - | chr3.4:38949102-38949121 | None:intergenic | 50.0% |
| ! | GCATTTTCCCCCACCACTTA+AGG | + | chr3.4:38948445-38948464 | MS.gene22252:intron | 50.0% |
| ! | GCTGAGGCACTAGTTAGACT+TGG | - | chr3.4:38949587-38949606 | None:intergenic | 50.0% |
| ! | GGGATAGGGAAAGAAGGCAT+AGG | + | chr3.4:38944075-38944094 | MS.gene22252:CDS | 50.0% |
| ! | TGTCAGAGCATCTAGGCATC+CGG | + | chr3.4:38949989-38950008 | MS.gene22252:CDS | 50.0% |
| ! | TTCCGCCGTTTAAGTTAGCG+AGG | + | chr3.4:38944456-38944475 | MS.gene22252:CDS | 50.0% |
| ! | TTGGGCCTTATAACCCCTGT+TGG | - | chr3.4:38946551-38946570 | None:intergenic | 50.0% |
| !! | AGGGAGTGGGTTTTCTTCGA+CGG | - | chr3.4:38949412-38949431 | None:intergenic | 50.0% |
| !! | GAAGAAAAGCTTGCTGGGTG+AGG | + | chr3.4:38947474-38947493 | MS.gene22252:CDS | 50.0% |
| AAGTCACAGATGGCGTCACC+CGG | + | chr3.4:38944662-38944681 | MS.gene22252:CDS | 55.0% | |
| AAGTCGTGTCGTCCTCAGTC+AGG | - | chr3.4:38948066-38948085 | None:intergenic | 55.0% | |
| AATCTGTGTTGCACGGGTGC+GGG | - | chr3.4:38946089-38946108 | None:intergenic | 55.0% | |
| ACCTCCTCCTCTGCTAGTGA+TGG | + | chr3.4:38945281-38945300 | MS.gene22252:intron | 55.0% | |
| ACTCTCCCCATCACTAGCAG+AGG | - | chr3.4:38945291-38945310 | None:intergenic | 55.0% | |
| AGATCGGCGTCGTCGGTATA+AGG | + | chr3.4:38944136-38944155 | MS.gene22252:CDS | 55.0% | |
| ATCAGAGGGAGAGGAAGGCT+CGG | + | chr3.4:38947504-38947523 | MS.gene22252:CDS | 55.0% | |
| ATGAAGGAAGTGGGAGAGCG+AGG | + | chr3.4:38944366-38944385 | MS.gene22252:CDS | 55.0% | |
| CAAGCTAGGTGCAAGACAGC+AGG | - | chr3.4:38949488-38949507 | None:intergenic | 55.0% | |
| CACTAGCAGAGGAGGAGGTA+AGG | - | chr3.4:38945280-38945299 | None:intergenic | 55.0% | |
| CATACGAGTACCAGTACCCG+CGG | - | chr3.4:38945506-38945525 | None:intergenic | 55.0% | |
| CCACGAAGTCTCCTTGGATG+AGG | + | chr3.4:38947269-38947288 | MS.gene22252:CDS | 55.0% | |
| CCATCTTGAGCCAGGTCAAG+AGG | + | chr3.4:38947690-38947709 | MS.gene22252:CDS | 55.0% | |
| CCTCATCCAAGGAGACTTCG+TGG | - | chr3.4:38947272-38947291 | None:intergenic | 55.0% | |
| CCTCCTCCTCTGCTAGTGAT+GGG | + | chr3.4:38945282-38945301 | MS.gene22252:intron | 55.0% | |
| CCTCTTGACCTGGCTCAAGA+TGG | - | chr3.4:38947693-38947712 | None:intergenic | 55.0% | |
| CTCCTCCTCTGCTAGTGATG+GGG | + | chr3.4:38945283-38945302 | MS.gene22252:intron | 55.0% | |
| CTCTCACCGAGAGGACTTCA+TGG | + | chr3.4:38945071-38945090 | MS.gene22252:CDS | 55.0% | |
| GACGAACTGCCCTTCTTCCT+CGG | - | chr3.4:38943874-38943893 | None:intergenic | 55.0% | |
| GACGCGATGACGATGATAGG+AGG | + | chr3.4:38944273-38944292 | MS.gene22252:CDS | 55.0% | |
| GAGGAATCAGAGGGAGAGGA+AGG | + | chr3.4:38947499-38947518 | MS.gene22252:CDS | 55.0% | |
| GATCTTCGCCGGAAACATCG+TGG | + | chr3.4:38943939-38943958 | MS.gene22252:CDS | 55.0% | |
| GCAGTACCGTAACCGTACCA+AGG | - | chr3.4:38945584-38945603 | None:intergenic | 55.0% | |
| GCCAACTGAAGCTGGAATGG+TGG | - | chr3.4:38949124-38949143 | None:intergenic | 55.0% | |
| GCCACACTGCCATAGCAGTT+TGG | + | chr3.4:38949732-38949751 | MS.gene22252:intron | 55.0% | |
| GCTTCTCGAATGTTGCAGCC+AGG | + | chr3.4:38947832-38947851 | MS.gene22252:CDS | 55.0% | |
| GGAAGAGGAATCAGAGGGAG+AGG | + | chr3.4:38947495-38947514 | MS.gene22252:CDS | 55.0% | |
| GGAAGGCTCGGATGCTGAAT+CGG | + | chr3.4:38947516-38947535 | MS.gene22252:CDS | 55.0% | |
| GGCAATGCCATTGATGCCAC+TGG | + | chr3.4:38949141-38949160 | MS.gene22252:intron | 55.0% | |
| GGCATAGGGCTGATAGGGTT+AGG | + | chr3.4:38944090-38944109 | MS.gene22252:CDS | 55.0% | |
| GGGATAGGGATAACCGTCGA+AGG | + | chr3.4:38944009-38944028 | MS.gene22252:CDS | 55.0% | |
| GGGTGAGGAAGAGGAATCAG+AGG | + | chr3.4:38947489-38947508 | MS.gene22252:CDS | 55.0% | |
| GTACTGCGGTGGTACTCTCA+GGG | + | chr3.4:38945597-38945616 | MS.gene22252:intron | 55.0% | |
| TATCGCGCTAGAGCTGCTCA+CGG | + | chr3.4:38944968-38944987 | MS.gene22252:CDS | 55.0% | |
| TCAAGTTCAGGCCGAACAGC+TGG | - | chr3.4:38947222-38947241 | None:intergenic | 55.0% | |
| TCTGATCTTCCTGCTCCACG+AGG | - | chr3.4:38947245-38947264 | None:intergenic | 55.0% | |
| TGAACTTGACCTCGTGGAGC+AGG | + | chr3.4:38947233-38947252 | MS.gene22252:CDS | 55.0% | |
| TGCTCCACGAGGTCAAGTTC+AGG | - | chr3.4:38947234-38947253 | None:intergenic | 55.0% | |
| TGTGCAACATCCTACTCCCC+TGG | - | chr3.4:38945653-38945672 | None:intergenic | 55.0% | |
| ! | TCGGGACTTTTGCTCTGCCT+TGG | + | chr3.4:38948020-38948039 | MS.gene22252:CDS | 55.0% |
| ! | TCTGCTAGTGATGGGGAGAG+TGG | + | chr3.4:38945290-38945309 | MS.gene22252:intron | 55.0% |
| ! | TGGAGTACCCGTGCTTCAGA+GGG | - | chr3.4:38945454-38945473 | None:intergenic | 55.0% |
| ! | TTGGAGTACCCGTGCTTCAG+AGG | - | chr3.4:38945455-38945474 | None:intergenic | 55.0% |
| !! | AAGCTTGCTGGGTGAGGAAG+AGG | + | chr3.4:38947480-38947499 | MS.gene22252:CDS | 55.0% |
| !! | CTTGGGGCGGATTTTTGACC+TGG | - | chr3.4:38949089-38949108 | None:intergenic | 55.0% |
| !! | GGGAGTGGGTTTTCTTCGAC+GGG | - | chr3.4:38949411-38949430 | None:intergenic | 55.0% |
| AGGAAGTGGGAGAGCGAGGA+CGG | + | chr3.4:38944370-38944389 | MS.gene22252:CDS | 60.0% | |
| AGGAGAGAGATCGGCGTCGT+CGG | + | chr3.4:38944129-38944148 | MS.gene22252:CDS | 60.0% | |
| AGTCACAGATGGCGTCACCC+GGG | + | chr3.4:38944663-38944682 | MS.gene22252:CDS | 60.0% | |
| CCCATCACTAGCAGAGGAGG+AGG | - | chr3.4:38945285-38945304 | None:intergenic | 60.0% | |
| CTCCCCATCACTAGCAGAGG+AGG | - | chr3.4:38945288-38945307 | None:intergenic | 60.0% | |
| CTGACGTGGAGGATCTTCGC+CGG | + | chr3.4:38943928-38943947 | MS.gene22252:CDS | 60.0% | |
| CTGCAGGATCTCTCACCGAG+AGG | + | chr3.4:38945062-38945081 | MS.gene22252:CDS | 60.0% | |
| CTTCGCCGGAAACATCGTGG+TGG | + | chr3.4:38943942-38943961 | MS.gene22252:CDS | 60.0% | |
| GAGAGCGAGGACGGTGATAC+CGG | + | chr3.4:38944379-38944398 | MS.gene22252:CDS | 60.0% | |
| GATCCTCCACGTCAGCTCCA+CGG | - | chr3.4:38943923-38943942 | None:intergenic | 60.0% | |
| GATGGCGTCACCCGGGTTTA+CGG | + | chr3.4:38944670-38944689 | MS.gene22252:CDS | 60.0% | |
| GGTACTGCGGTGGTACTCTC+AGG | + | chr3.4:38945596-38945615 | MS.gene22252:intron | 60.0% | |
| GTACGGTTACGGTACTGCGG+TGG | + | chr3.4:38945586-38945605 | MS.gene22252:intron | 60.0% | |
| GTTCCCAACTTGCACCCCAG+TGG | + | chr3.4:38949437-38949456 | MS.gene22252:intron | 60.0% | |
| TACGGTACCCGGTACGGGTA+CGG | - | chr3.4:38946066-38946085 | None:intergenic | 60.0% | |
| TCGGCCTGAACTTGACCTCG+TGG | + | chr3.4:38947227-38947246 | MS.gene22252:CDS | 60.0% | |
| !! | CGCGGGTACTGGTACTCGTA+TGG | + | chr3.4:38945504-38945523 | MS.gene22252:intron | 60.0% |
| ACGGGTGCGGGTACGGGATA+CGG | - | chr3.4:38946047-38946066 | None:intergenic | 65.0% | |
| ACGGTACCCGGTACGGGTAC+GGG | - | chr3.4:38946065-38946084 | None:intergenic | 65.0% | |
| GAAGAGAAGCGAGACCGCCG+TGG | + | chr3.4:38943903-38943922 | MS.gene22252:CDS | 65.0% | |
| GTGTTGCACGGGTGCGGGTA+CGG | - | chr3.4:38946084-38946103 | None:intergenic | 65.0% | |
| TACCCGTACCGGGTACTCCG+CGG | + | chr3.4:38945486-38945505 | MS.gene22252:intron | 65.0% | |
| TACGGGTACGGGTGCGGGTA+CGG | - | chr3.4:38946054-38946073 | None:intergenic | 65.0% | |
| TGCGGGTACGGTACCCGGTA+CGG | - | chr3.4:38946072-38946091 | None:intergenic | 65.0% | |
| ! | ACCAGTACCCGCGGAGTACC+CGG | - | chr3.4:38945497-38945516 | None:intergenic | 65.0% |
| ! | TACCCGCGGAGTACCCGGTA+CGG | - | chr3.4:38945492-38945511 | None:intergenic | 65.0% |
| ACCCGCACCCGTACCCGTAC+CGG | + | chr3.4:38946055-38946074 | MS.gene22252:intron | 70.0% | |
| ACCCGGTACGGGTACGGGTG+CGG | - | chr3.4:38946060-38946079 | None:intergenic | 70.0% | |
| ACCCGTACCGGGTACTCCGC+GGG | + | chr3.4:38945487-38945506 | MS.gene22252:intron | 70.0% | |
| ACCGGGTACTCCGCGGGTAC+TGG | + | chr3.4:38945493-38945512 | MS.gene22252:intron | 70.0% | |
| ACGGGTACGGGTGCGGGTAC+GGG | - | chr3.4:38946053-38946072 | None:intergenic | 70.0% | |
| ACGGGTGCGGGTACGGTACC+CGG | - | chr3.4:38946077-38946096 | None:intergenic | 70.0% | |
| AGACCGCCGTGGAGCTGACG+TGG | + | chr3.4:38943914-38943933 | MS.gene22252:CDS | 70.0% | |
| CACTGCGGCTGCTACCCTGC+AGG | + | chr3.4:38949267-38949286 | MS.gene22252:intron | 70.0% | |
| CCTCCACGTCAGCTCCACGG+CGG | - | chr3.4:38943920-38943939 | None:intergenic | 70.0% | |
| CTGCAGGGTAGCAGCCGCAG+TGG | - | chr3.4:38949269-38949288 | None:intergenic | 70.0% | |
| GCGGGTACGGTACCCGGTAC+GGG | - | chr3.4:38946071-38946090 | None:intergenic | 70.0% | |
| ! | ACCCGCGGAGTACCCGGTAC+GGG | - | chr3.4:38945491-38945510 | None:intergenic | 70.0% |
| CCCGCACCCGTACCCGTACC+GGG | + | chr3.4:38946056-38946075 | MS.gene22252:intron | 75.0% | |
| CCCGGTACGGGTACGGGTGC+GGG | - | chr3.4:38946059-38946078 | None:intergenic | 75.0% | |
| CCGCCGTGGAGCTGACGTGG+AGG | + | chr3.4:38943917-38943936 | MS.gene22252:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 38943843 | 38950326 | 38943843 | ID=MS.gene22252 |
| chr3.4 | mRNA | 38943843 | 38950326 | 38943843 | ID=MS.gene22252.t1;Parent=MS.gene22252 |
| chr3.4 | exon | 38943843 | 38944805 | 38943843 | ID=MS.gene22252.t1.exon1;Parent=MS.gene22252.t1 |
| chr3.4 | CDS | 38943843 | 38944805 | 38943843 | ID=cds.MS.gene22252.t1;Parent=MS.gene22252.t1 |
| chr3.4 | exon | 38944903 | 38945092 | 38944903 | ID=MS.gene22252.t1.exon2;Parent=MS.gene22252.t1 |
| chr3.4 | CDS | 38944903 | 38945092 | 38944903 | ID=cds.MS.gene22252.t1;Parent=MS.gene22252.t1 |
| chr3.4 | exon | 38946794 | 38946897 | 38946794 | ID=MS.gene22252.t1.exon3;Parent=MS.gene22252.t1 |
| chr3.4 | CDS | 38946794 | 38946897 | 38946794 | ID=cds.MS.gene22252.t1;Parent=MS.gene22252.t1 |
| chr3.4 | exon | 38947213 | 38947315 | 38947213 | ID=MS.gene22252.t1.exon4;Parent=MS.gene22252.t1 |
| chr3.4 | CDS | 38947213 | 38947315 | 38947213 | ID=cds.MS.gene22252.t1;Parent=MS.gene22252.t1 |
| chr3.4 | exon | 38947419 | 38947711 | 38947419 | ID=MS.gene22252.t1.exon5;Parent=MS.gene22252.t1 |
| chr3.4 | CDS | 38947419 | 38947711 | 38947419 | ID=cds.MS.gene22252.t1;Parent=MS.gene22252.t1 |
| chr3.4 | exon | 38947815 | 38948120 | 38947815 | ID=MS.gene22252.t1.exon6;Parent=MS.gene22252.t1 |
| chr3.4 | CDS | 38947815 | 38948120 | 38947815 | ID=cds.MS.gene22252.t1;Parent=MS.gene22252.t1 |
| chr3.4 | exon | 38949985 | 38950326 | 38949985 | ID=MS.gene22252.t1.exon7;Parent=MS.gene22252.t1 |
| chr3.4 | CDS | 38949985 | 38950326 | 38949985 | ID=cds.MS.gene22252.t1;Parent=MS.gene22252.t1 |
| Gene Sequence |
| Protein sequence |
