Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22666.t1 | XP_003626426.1 | 92.9 | 127 | 9 | 0 | 60 | 186 | 1 | 127 | 1.00E-66 | 263.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22666.t1 | Q852K5 | 42.7 | 131 | 66 | 2 | 62 | 183 | 21 | 151 | 2.5e-26 | 120.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22666.t1 | G7L1U6 | 92.9 | 127 | 9 | 0 | 60 | 186 | 1 | 127 | 7.3e-67 | 263.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049491 | MS.gene22666 | 0.805124 | 1.55E-49 | -1.69E-46 |
| MS.gene049681 | MS.gene22666 | 0.802293 | 6.01E-49 | -1.69E-46 |
| MS.gene049758 | MS.gene22666 | 0.825984 | 3.48E-54 | -1.69E-46 |
| MS.gene050301 | MS.gene22666 | 0.848613 | 5.48E-60 | -1.69E-46 |
| MS.gene050670 | MS.gene22666 | 0.80254 | 5.34E-49 | -1.69E-46 |
| MS.gene05101 | MS.gene22666 | 0.815976 | 7.02E-52 | -1.69E-46 |
| MS.gene051663 | MS.gene22666 | 0.836985 | 6.79E-57 | -1.69E-46 |
| MS.gene051860 | MS.gene22666 | 0.811479 | 6.86E-51 | -1.69E-46 |
| MS.gene052078 | MS.gene22666 | 0.800872 | 1.18E-48 | -1.69E-46 |
| MS.gene052188 | MS.gene22666 | 0.839468 | 1.56E-57 | -1.69E-46 |
| MS.gene052253 | MS.gene22666 | 0.808021 | 3.80E-50 | -1.69E-46 |
| MS.gene052310 | MS.gene22666 | 0.821141 | 4.73E-53 | -1.69E-46 |
| MS.gene052340 | MS.gene22666 | 0.823146 | 1.62E-53 | -1.69E-46 |
| MS.gene052485 | MS.gene22666 | 0.813698 | 2.24E-51 | -1.69E-46 |
| MS.gene053836 | MS.gene22666 | 0.869604 | 2.73E-66 | -1.69E-46 |
| MS.gene054123 | MS.gene22666 | 0.864127 | 1.52E-64 | -1.69E-46 |
| MS.gene054930 | MS.gene22666 | 0.829435 | 5.16E-55 | -1.69E-46 |
| MS.gene055116 | MS.gene22666 | 0.806951 | 6.41E-50 | -1.69E-46 |
| MS.gene055277 | MS.gene22666 | 0.800567 | 1.36E-48 | -1.69E-46 |
| MS.gene055422 | MS.gene22666 | 0.838223 | 3.27E-57 | -1.69E-46 |
| MS.gene055428 | MS.gene22666 | 0.827794 | 1.29E-54 | -1.69E-46 |
| MS.gene055712 | MS.gene22666 | 0.807936 | 3.96E-50 | -1.69E-46 |
| MS.gene056407 | MS.gene22666 | 0.835559 | 1.56E-56 | -1.69E-46 |
| MS.gene05702 | MS.gene22666 | 0.815651 | 8.29E-52 | -1.69E-46 |
| MS.gene057448 | MS.gene22666 | 0.820577 | 6.37E-53 | -1.69E-46 |
| MS.gene057449 | MS.gene22666 | 0.824838 | 6.50E-54 | -1.69E-46 |
| MS.gene057450 | MS.gene22666 | 0.822159 | 2.75E-53 | -1.69E-46 |
| MS.gene057469 | MS.gene22666 | 0.800888 | 1.17E-48 | -1.69E-46 |
| MS.gene057749 | MS.gene22666 | 0.833998 | 3.86E-56 | -1.69E-46 |
| MS.gene057823 | MS.gene22666 | 0.81903 | 1.44E-52 | -1.69E-46 |
| MS.gene058002 | MS.gene22666 | 0.849318 | 3.49E-60 | -1.69E-46 |
| MS.gene05811 | MS.gene22666 | 0.817515 | 3.17E-52 | -1.69E-46 |
| MS.gene058660 | MS.gene22666 | 0.840851 | 6.78E-58 | -1.69E-46 |
| MS.gene05886 | MS.gene22666 | 0.835083 | 2.06E-56 | -1.69E-46 |
| MS.gene058928 | MS.gene22666 | 0.803664 | 3.13E-49 | -1.69E-46 |
| MS.gene058949 | MS.gene22666 | 0.842958 | 1.88E-58 | -1.69E-46 |
| MS.gene05907 | MS.gene22666 | 0.861876 | 7.54E-64 | -1.69E-46 |
| MS.gene059285 | MS.gene22666 | 0.816962 | 4.22E-52 | -1.69E-46 |
| MS.gene059597 | MS.gene22666 | 0.862426 | 5.11E-64 | -1.69E-46 |
| MS.gene059676 | MS.gene22666 | 0.840462 | 8.57E-58 | -1.69E-46 |
| MS.gene059688 | MS.gene22666 | 0.814423 | 1.55E-51 | -1.69E-46 |
| MS.gene059692 | MS.gene22666 | 0.811596 | 6.47E-51 | -1.69E-46 |
| MS.gene059695 | MS.gene22666 | 0.80848 | 3.03E-50 | -1.69E-46 |
| MS.gene05984 | MS.gene22666 | 0.816505 | 5.34E-52 | -1.69E-46 |
| MS.gene059894 | MS.gene22666 | 0.800094 | 1.69E-48 | -1.69E-46 |
| MS.gene06037 | MS.gene22666 | 0.803267 | 3.78E-49 | -1.69E-46 |
| MS.gene060403 | MS.gene22666 | 0.807779 | 4.28E-50 | -1.69E-46 |
| MS.gene060495 | MS.gene22666 | 0.828139 | 1.06E-54 | -1.69E-46 |
| MS.gene061049 | MS.gene22666 | 0.836309 | 1.01E-56 | -1.69E-46 |
| MS.gene061051 | MS.gene22666 | -0.845543 | 3.80E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22666.t1 | MTR_7g114920 | 92.913 | 127 | 9 | 0 | 60 | 186 | 1 | 127 | 5.31e-87 | 252 |
| MS.gene22666.t1 | MTR_1g100773 | 75.556 | 135 | 24 | 2 | 60 | 186 | 1 | 134 | 5.49e-70 | 209 |
| MS.gene22666.t1 | MTR_2g054650 | 53.125 | 128 | 45 | 5 | 62 | 185 | 4 | 120 | 7.84e-34 | 117 |
| MS.gene22666.t1 | MTR_4g053440 | 37.500 | 152 | 66 | 3 | 64 | 186 | 13 | 164 | 6.30e-30 | 108 |
| MS.gene22666.t1 | MTR_2g086190 | 43.056 | 144 | 66 | 5 | 56 | 186 | 4 | 144 | 6.97e-30 | 107 |
| MS.gene22666.t1 | MTR_1g060380 | 40.972 | 144 | 69 | 3 | 56 | 183 | 4 | 147 | 6.52e-29 | 105 |
| MS.gene22666.t1 | MTR_7g104320 | 38.776 | 147 | 61 | 3 | 64 | 183 | 15 | 159 | 2.32e-28 | 104 |
| MS.gene22666.t1 | MTR_0249s0070 | 33.537 | 164 | 82 | 4 | 47 | 183 | 5 | 168 | 9.23e-25 | 95.5 |
| MS.gene22666.t1 | MTR_0249s0070 | 34.839 | 155 | 74 | 4 | 56 | 183 | 6 | 160 | 1.10e-24 | 95.1 |
| MS.gene22666.t1 | MTR_2g098160 | 35.570 | 149 | 69 | 3 | 62 | 183 | 15 | 163 | 1.08e-23 | 92.4 |
| MS.gene22666.t1 | MTR_7g092400 | 35.333 | 150 | 68 | 4 | 62 | 183 | 103 | 251 | 9.06e-23 | 92.0 |
| MS.gene22666.t1 | MTR_3g028010 | 30.921 | 152 | 98 | 2 | 39 | 183 | 3 | 154 | 1.54e-22 | 89.4 |
| MS.gene22666.t1 | MTR_4g065570 | 34.646 | 127 | 61 | 3 | 79 | 183 | 2 | 128 | 1.10e-18 | 78.6 |
| MS.gene22666.t1 | MTR_8g036980 | 53.846 | 52 | 24 | 0 | 132 | 183 | 91 | 142 | 1.14e-16 | 73.6 |
| MS.gene22666.t1 | MTR_3g025570 | 50.000 | 46 | 23 | 0 | 125 | 170 | 2 | 47 | 4.43e-11 | 57.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22666.t1 | AT1G12440 | 42.361 | 144 | 61 | 4 | 62 | 183 | 16 | 159 | 2.78e-32 | 114 |
| MS.gene22666.t1 | AT1G12440 | 42.361 | 144 | 61 | 4 | 62 | 183 | 16 | 159 | 2.78e-32 | 114 |
| MS.gene22666.t1 | AT1G12440 | 42.361 | 144 | 61 | 4 | 62 | 183 | 16 | 159 | 2.78e-32 | 114 |
| MS.gene22666.t1 | AT4G12040 | 40.397 | 151 | 61 | 4 | 62 | 183 | 16 | 166 | 2.57e-30 | 109 |
| MS.gene22666.t1 | AT4G12040 | 40.397 | 151 | 61 | 4 | 62 | 183 | 16 | 166 | 2.57e-30 | 109 |
| MS.gene22666.t1 | AT4G22820 | 35.000 | 160 | 77 | 2 | 51 | 183 | 8 | 167 | 5.55e-29 | 106 |
| MS.gene22666.t1 | AT4G22820 | 35.000 | 160 | 77 | 2 | 51 | 183 | 8 | 167 | 5.55e-29 | 106 |
| MS.gene22666.t1 | AT4G14225 | 44.800 | 125 | 59 | 4 | 62 | 186 | 5 | 119 | 2.36e-26 | 97.8 |
| MS.gene22666.t1 | AT4G25380 | 42.857 | 119 | 61 | 2 | 65 | 183 | 10 | 121 | 1.38e-25 | 96.3 |
| MS.gene22666.t1 | AT3G52800 | 39.241 | 158 | 66 | 5 | 56 | 183 | 4 | 161 | 2.04e-25 | 97.1 |
| MS.gene22666.t1 | AT3G52800 | 39.241 | 158 | 66 | 5 | 56 | 183 | 4 | 161 | 2.04e-25 | 97.1 |
| MS.gene22666.t1 | AT2G36320 | 38.732 | 142 | 69 | 4 | 64 | 187 | 15 | 156 | 2.07e-25 | 96.7 |
| MS.gene22666.t1 | AT2G27580 | 34.000 | 150 | 66 | 3 | 62 | 183 | 10 | 154 | 5.61e-24 | 92.8 |
| MS.gene22666.t1 | AT2G27580 | 34.000 | 150 | 66 | 3 | 62 | 183 | 10 | 154 | 5.61e-24 | 92.8 |
| MS.gene22666.t1 | AT3G12630 | 36.364 | 121 | 70 | 3 | 70 | 183 | 31 | 151 | 1.52e-20 | 84.0 |
| MS.gene22666.t1 | AT1G51200 | 34.000 | 150 | 71 | 3 | 62 | 183 | 15 | 164 | 8.00e-20 | 82.4 |
| MS.gene22666.t1 | AT1G51200 | 34.000 | 150 | 71 | 3 | 62 | 183 | 15 | 164 | 8.00e-20 | 82.4 |
| MS.gene22666.t1 | AT1G51200 | 34.000 | 150 | 71 | 3 | 62 | 183 | 15 | 164 | 8.00e-20 | 82.4 |
| MS.gene22666.t1 | AT1G51200 | 34.000 | 150 | 71 | 3 | 62 | 183 | 15 | 164 | 8.00e-20 | 82.4 |
Find 46 sgRNAs with CRISPR-Local
Find 72 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTTTGCATGTATGTTCTTC+TGG | 0.205127 | 7.2:+2401554 | None:intergenic |
| GCCAATGGTTGTGGTTTCTA+TGG | 0.283691 | 7.2:-2401836 | MS.gene22666:CDS |
| CTTTGCATGTATGTTCTTCT+GGG | 0.309729 | 7.2:+2401555 | None:intergenic |
| AAGCCGATGACTCAAGAATA+AGG | 0.356929 | 7.2:+2401756 | None:intergenic |
| GAACAAAGGTTCTTGTTTGA+AGG | 0.378685 | 7.2:+2401809 | None:intergenic |
| GAAACAAAATCCTTTGTGTA+TGG | 0.383600 | 7.2:-2401498 | MS.gene22666:CDS |
| GACGGAGAAGGAGAGGGGTT+TGG | 0.390926 | 7.2:-2402392 | MS.gene22666:CDS |
| AAAGTGGATTTAAAAGAGAT+TGG | 0.430845 | 7.2:-2401536 | MS.gene22666:CDS |
| AGTGAGGGTTATGGCTTTGA+CGG | 0.436346 | 7.2:-2402410 | None:intergenic |
| TCACAAATATCATTGATACT+AGG | 0.441086 | 7.2:+2401716 | None:intergenic |
| GTGCGTAGTTTAAGAGAGGA+AGG | 0.456139 | 7.2:-2402370 | MS.gene22666:CDS |
| TCACTTTGTGCCAATGGTTG+TGG | 0.466305 | 7.2:-2401845 | MS.gene22666:CDS |
| AAACCTTATTCTTGAGTCAT+CGG | 0.472750 | 7.2:-2401759 | MS.gene22666:CDS |
| TTGATACTAGGGTTCTTTGA+AGG | 0.481391 | 7.2:+2401728 | None:intergenic |
| AACAAAATCCTTTGTGTATG+GGG | 0.487990 | 7.2:-2401496 | MS.gene22666:CDS |
| AAACAAAATCCTTTGTGTAT+GGG | 0.488764 | 7.2:-2401497 | MS.gene22666:CDS |
| CACAAATATCATTGATACTA+GGG | 0.493722 | 7.2:+2401717 | None:intergenic |
| GGTTATGGCTTTGACGGAGA+AGG | 0.516948 | 7.2:-2402404 | None:intergenic |
| GTTCCGTCACTTTGTGCCAA+TGG | 0.523599 | 7.2:-2401851 | MS.gene22666:CDS |
| TAAGAGAGGAAGGGGTGCGT+AGG | 0.523850 | 7.2:-2402360 | MS.gene22666:CDS |
| GGCTTTGACGGAGAAGGAGA+GGG | 0.532470 | 7.2:-2402398 | MS.gene22666:CDS |
| TGCGTAGTTTAAGAGAGGAA+GGG | 0.537577 | 7.2:-2402369 | MS.gene22666:CDS |
| CATTGTAACACTTTGAACAA+AGG | 0.545148 | 7.2:+2401795 | None:intergenic |
| AGGAGAAGAAAACTAGGTGC+AGG | 0.548806 | 7.2:-2401652 | MS.gene22666:CDS |
| TGGTGGTGATGAGAGGGATA+AGG | 0.549250 | 7.2:-2402296 | MS.gene22666:CDS |
| ACCATAGAAACCACAACCAT+TGG | 0.550076 | 7.2:+2401835 | None:intergenic |
| TTTGGTGCGTAGTTTAAGAG+AGG | 0.557983 | 7.2:-2402374 | MS.gene22666:CDS |
| AGAGTGATGGTGGTGATGAG+AGG | 0.569060 | 7.2:-2402303 | MS.gene22666:CDS |
| GCGTAGTTTAAGAGAGGAAG+GGG | 0.569207 | 7.2:-2402368 | MS.gene22666:CDS |
| GAGTGATGGTGGTGATGAGA+GGG | 0.569582 | 7.2:-2402302 | MS.gene22666:CDS |
| ACATGAAGGAGAAGAAAACT+AGG | 0.590117 | 7.2:-2401658 | MS.gene22666:CDS |
| TGGCTTTGACGGAGAAGGAG+AGG | 0.597092 | 7.2:-2402399 | MS.gene22666:CDS |
| AATGAGGAAGAGAGTGATGG+TGG | 0.598981 | 7.2:-2402313 | MS.gene22666:CDS |
| TGTGGAGGCATTGAAGAATG+AGG | 0.609129 | 7.2:-2402329 | MS.gene22666:CDS |
| CATTGACAATGATAACATGA+AGG | 0.609470 | 7.2:-2401672 | MS.gene22666:CDS |
| ACAGGGTTCAAGTGCCGTTG+TGG | 0.610080 | 7.2:-2401605 | MS.gene22666:CDS |
| CAACCATTGGCACAAAGTGA+CGG | 0.611416 | 7.2:+2401848 | None:intergenic |
| AGAAGAACATACATGCAAAG+TGG | 0.612995 | 7.2:-2401552 | MS.gene22666:CDS |
| GGTGCGTAGGTTAAGACGTG+TGG | 0.614414 | 7.2:-2402347 | MS.gene22666:CDS |
| ACTAAGTGAAACAACATGCA+TGG | 0.623449 | 7.2:-2401873 | MS.gene22666:CDS |
| AAGAATGAGGAAGAGAGTGA+TGG | 0.624967 | 7.2:-2402316 | MS.gene22666:CDS |
| ATTGAATTGAAAATCAACAA+TGG | 0.628122 | 7.2:+2402270 | None:intergenic |
| GCTTTGACGGAGAAGGAGAG+GGG | 0.637010 | 7.2:-2402397 | MS.gene22666:CDS |
| GCGTAGGTTAAGACGTGTGG+AGG | 0.638442 | 7.2:-2402344 | MS.gene22666:CDS |
| ACAAAATCCTTTGTGTATGG+GGG | 0.652043 | 7.2:-2401495 | MS.gene22666:CDS |
| CACAAAATACATCACCACAA+CGG | 0.670499 | 7.2:+2401591 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTTGGTAAAAAAAAAAA+GGG | + | chr7.2:2401956-2401975 | None:intergenic | 10.0% |
| !! | TATATTTGGTAAAAAAAAAA+AGG | + | chr7.2:2401957-2401976 | None:intergenic | 10.0% |
| !!! | TATAATTTTCAATTGAATTT+TGG | - | chr7.2:2401808-2401827 | MS.gene22666:CDS | 10.0% |
| !! | GAAATAGTTGTAATTATATT+TGG | + | chr7.2:2401971-2401990 | None:intergenic | 15.0% |
| !! | ATAAACAAAAATATAACCTG+CGG | + | chr7.2:2401762-2401781 | None:intergenic | 20.0% |
| !! | ATTGAATTGAAAATCAACAA+TGG | + | chr7.2:2401617-2401636 | None:intergenic | 20.0% |
| !!! | AAAAAGGGTATAGAATAATT+AGG | + | chr7.2:2401941-2401960 | None:intergenic | 20.0% |
| !!! | GATTTTGTTTCTCTAATATT+TGG | + | chr7.2:2402377-2402396 | None:intergenic | 20.0% |
| ! | AAACAAAATCCTTTGTGTAT+GGG | - | chr7.2:2402387-2402406 | MS.gene22666:CDS | 25.0% |
| ! | CACAAATATCATTGATACTA+GGG | + | chr7.2:2402170-2402189 | None:intergenic | 25.0% |
| ! | TCACAAATATCATTGATACT+AGG | + | chr7.2:2402171-2402190 | None:intergenic | 25.0% |
| !! | AAAGTGGATTTAAAAGAGAT+TGG | - | chr7.2:2402348-2402367 | MS.gene22666:CDS | 25.0% |
| AAACCTTATTCTTGAGTCAT+CGG | - | chr7.2:2402125-2402144 | MS.gene22666:intron | 30.0% | |
| AACAAAATCCTTTGTGTATG+GGG | - | chr7.2:2402388-2402407 | MS.gene22666:CDS | 30.0% | |
| ACAAAAGAGATGAGATAGAT+AGG | + | chr7.2:2401688-2401707 | None:intergenic | 30.0% | |
| AGCATATATCGTTTAGAAGT+TGG | + | chr7.2:2401886-2401905 | None:intergenic | 30.0% | |
| CATTGACAATGATAACATGA+AGG | - | chr7.2:2402212-2402231 | MS.gene22666:intron | 30.0% | |
| CATTGTAACACTTTGAACAA+AGG | + | chr7.2:2402092-2402111 | None:intergenic | 30.0% | |
| GAAACAAAATCCTTTGTGTA+TGG | - | chr7.2:2402386-2402405 | MS.gene22666:CDS | 30.0% | |
| GATTCATTCACATTCATATG+CGG | - | chr7.2:2401906-2401925 | MS.gene22666:intron | 30.0% | |
| ! | GATTATAGAACTGAAGTGTT+GGG | + | chr7.2:2401666-2401685 | None:intergenic | 30.0% |
| AACAAAAAAGTGGGACTAAC+AGG | - | chr7.2:2402261-2402280 | MS.gene22666:intron | 35.0% | |
| ACAAAAAAGTGGGACTAACA+GGG | - | chr7.2:2402262-2402281 | MS.gene22666:intron | 35.0% | |
| ACAAAATCCTTTGTGTATGG+GGG | - | chr7.2:2402389-2402408 | MS.gene22666:CDS | 35.0% | |
| ACAATCCAACTTTGCTGAAA+AGG | + | chr7.2:2401840-2401859 | None:intergenic | 35.0% | |
| ACATGAAGGAGAAGAAAACT+AGG | - | chr7.2:2402226-2402245 | MS.gene22666:intron | 35.0% | |
| ACTAAGTGAAACAACATGCA+TGG | - | chr7.2:2402011-2402030 | MS.gene22666:intron | 35.0% | |
| ACTTTGCATGTATGTTCTTC+TGG | + | chr7.2:2402333-2402352 | None:intergenic | 35.0% | |
| AGAAGAACATACATGCAAAG+TGG | - | chr7.2:2402332-2402351 | MS.gene22666:CDS | 35.0% | |
| AGGAGTTGCAACAAAAAAGT+GGG | - | chr7.2:2402252-2402271 | MS.gene22666:intron | 35.0% | |
| CACAAAATACATCACCACAA+CGG | + | chr7.2:2402296-2402315 | None:intergenic | 35.0% | |
| CTTTGCATGTATGTTCTTCT+GGG | + | chr7.2:2402332-2402351 | None:intergenic | 35.0% | |
| GGATTATAGAACTGAAGTGT+TGG | + | chr7.2:2401667-2401686 | None:intergenic | 35.0% | |
| TCAGCAAAGTTGGATTGTAT+TGG | - | chr7.2:2401842-2401861 | MS.gene22666:CDS | 35.0% | |
| TTGATACTAGGGTTCTTTGA+AGG | + | chr7.2:2402159-2402178 | None:intergenic | 35.0% | |
| ! | ATCGTTTAGAAGTTGGTTGT+TGG | + | chr7.2:2401879-2401898 | None:intergenic | 35.0% |
| ! | GAACAAAGGTTCTTGTTTGA+AGG | + | chr7.2:2402078-2402097 | None:intergenic | 35.0% |
| ! | GTTTTCCTTTTCAGCAAAGT+TGG | - | chr7.2:2401832-2401851 | MS.gene22666:CDS | 35.0% |
| !! | CTCATCTCTTTTGTTGTGTT+TGG | - | chr7.2:2401694-2401713 | MS.gene22666:CDS | 35.0% |
| !! | TCTCTTTTGTTGTGTTTGGT+TGG | - | chr7.2:2401698-2401717 | MS.gene22666:CDS | 35.0% |
| AAGAATGAGGAAGAGAGTGA+TGG | - | chr7.2:2401568-2401587 | MS.gene22666:CDS | 40.0% | |
| AAGCCGATGACTCAAGAATA+AGG | + | chr7.2:2402131-2402150 | None:intergenic | 40.0% | |
| ACCATAGAAACCACAACCAT+TGG | + | chr7.2:2402052-2402071 | None:intergenic | 40.0% | |
| CAAAAATATAACCTGCGGTG+TGG | + | chr7.2:2401757-2401776 | None:intergenic | 40.0% | |
| CAGGAGTTGCAACAAAAAAG+TGG | - | chr7.2:2402251-2402270 | MS.gene22666:intron | 40.0% | |
| TGCGTAGTTTAAGAGAGGAA+GGG | - | chr7.2:2401515-2401534 | MS.gene22666:CDS | 40.0% | |
| ! | TTTGGTGCGTAGTTTAAGAG+AGG | - | chr7.2:2401510-2401529 | MS.gene22666:CDS | 40.0% |
| !! | CGTTGTGGTGATGTATTTTG+TGG | - | chr7.2:2402294-2402313 | MS.gene22666:CDS | 40.0% |
| AATGAGGAAGAGAGTGATGG+TGG | - | chr7.2:2401571-2401590 | MS.gene22666:CDS | 45.0% | |
| AGGAGAAGAAAACTAGGTGC+AGG | - | chr7.2:2402232-2402251 | MS.gene22666:intron | 45.0% | |
| ATATAACCTGCGGTGTGGTT+TGG | + | chr7.2:2401752-2401771 | None:intergenic | 45.0% | |
| CAACCATTGGCACAAAGTGA+CGG | + | chr7.2:2402039-2402058 | None:intergenic | 45.0% | |
| CTTATCACCCCCATACACAA+AGG | + | chr7.2:2402399-2402418 | None:intergenic | 45.0% | |
| GCCAATGGTTGTGGTTTCTA+TGG | - | chr7.2:2402048-2402067 | MS.gene22666:intron | 45.0% | |
| GCGTAGTTTAAGAGAGGAAG+GGG | - | chr7.2:2401516-2401535 | MS.gene22666:CDS | 45.0% | |
| GTGCGTAGTTTAAGAGAGGA+AGG | - | chr7.2:2401514-2401533 | MS.gene22666:CDS | 45.0% | |
| TCACTTTGTGCCAATGGTTG+TGG | - | chr7.2:2402039-2402058 | MS.gene22666:intron | 45.0% | |
| !! | TGTGGAGGCATTGAAGAATG+AGG | - | chr7.2:2401555-2401574 | MS.gene22666:CDS | 45.0% |
| ! | GTTCCGTCACTTTGTGCCAA+TGG | - | chr7.2:2402033-2402052 | MS.gene22666:intron | 50.0% |
| ! | TGGTGGTGATGAGAGGGATA+AGG | - | chr7.2:2401588-2401607 | MS.gene22666:CDS | 50.0% |
| !! | AGAGTGATGGTGGTGATGAG+AGG | - | chr7.2:2401581-2401600 | MS.gene22666:CDS | 50.0% |
| !! | GAGTGATGGTGGTGATGAGA+GGG | - | chr7.2:2401582-2401601 | MS.gene22666:CDS | 50.0% |
| ACCAAACCAAACCACACCGC+AGG | - | chr7.2:2401743-2401762 | MS.gene22666:CDS | 55.0% | |
| GCGTAGGTTAAGACGTGTGG+AGG | - | chr7.2:2401540-2401559 | MS.gene22666:CDS | 55.0% | |
| GCTTTGACGGAGAAGGAGAG+GGG | - | chr7.2:2401487-2401506 | MS.gene22666:CDS | 55.0% | |
| GGTGCGTAGGTTAAGACGTG+TGG | - | chr7.2:2401537-2401556 | MS.gene22666:CDS | 55.0% | |
| ! | ACAGGGTTCAAGTGCCGTTG+TGG | - | chr7.2:2402279-2402298 | MS.gene22666:CDS | 55.0% |
| ! | GGCTTTGACGGAGAAGGAGA+GGG | - | chr7.2:2401486-2401505 | MS.gene22666:CDS | 55.0% |
| ! | TAAGAGAGGAAGGGGTGCGT+AGG | - | chr7.2:2401524-2401543 | MS.gene22666:CDS | 55.0% |
| !! | ACCTGCGGTGTGGTTTGGTT+TGG | + | chr7.2:2401747-2401766 | None:intergenic | 55.0% |
| !! | TGGCTTTGACGGAGAAGGAG+AGG | - | chr7.2:2401485-2401504 | MS.gene22666:CDS | 55.0% |
| GACGGAGAAGGAGAGGGGTT+TGG | - | chr7.2:2401492-2401511 | MS.gene22666:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 2401484 | 2402422 | 2401484 | ID=MS.gene22666 |
| chr7.2 | mRNA | 2401484 | 2402422 | 2401484 | ID=MS.gene22666.t1;Parent=MS.gene22666 |
| chr7.2 | exon | 2402270 | 2402422 | 2402270 | ID=MS.gene22666.t1.exon1;Parent=MS.gene22666.t1 |
| chr7.2 | CDS | 2402270 | 2402422 | 2402270 | ID=cds.MS.gene22666.t1;Parent=MS.gene22666.t1 |
| chr7.2 | exon | 2401484 | 2401900 | 2401484 | ID=MS.gene22666.t1.exon2;Parent=MS.gene22666.t1 |
| chr7.2 | CDS | 2401484 | 2401900 | 2401484 | ID=cds.MS.gene22666.t1;Parent=MS.gene22666.t1 |
| Gene Sequence |
| Protein sequence |
