Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049681.t1 | XP_003600627.1 | 91.9 | 582 | 9 | 2 | 1 | 544 | 1 | 582 | 1.60E-306 | 1061.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049681.t1 | Q9SS01 | 57.9 | 582 | 189 | 7 | 1 | 533 | 1 | 575 | 1.5e-180 | 634.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049681.t1 | G7J7Y4 | 91.9 | 582 | 9 | 2 | 1 | 544 | 1 | 582 | 1.1e-306 | 1061.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04933 | MS.gene049681 | 0.82258 | 2.20E-53 | -1.69E-46 |
| MS.gene049351 | MS.gene049681 | 0.80354 | 3.32E-49 | -1.69E-46 |
| MS.gene049681 | MS.gene05028 | 0.884311 | 2.14E-71 | -1.69E-46 |
| MS.gene049681 | MS.gene051255 | 0.804911 | 1.72E-49 | -1.69E-46 |
| MS.gene049681 | MS.gene051860 | 0.802771 | 4.79E-49 | -1.69E-46 |
| MS.gene049681 | MS.gene052253 | 0.804667 | 1.93E-49 | -1.69E-46 |
| MS.gene049681 | MS.gene053836 | 0.825232 | 5.25E-54 | -1.69E-46 |
| MS.gene049681 | MS.gene054010 | 0.813048 | 3.12E-51 | -1.69E-46 |
| MS.gene049681 | MS.gene054011 | 0.82793 | 1.19E-54 | -1.69E-46 |
| MS.gene049681 | MS.gene054012 | 0.821976 | 3.03E-53 | -1.69E-46 |
| MS.gene049681 | MS.gene054013 | 0.819058 | 1.42E-52 | -1.69E-46 |
| MS.gene049681 | MS.gene054173 | 0.811245 | 7.71E-51 | -1.69E-46 |
| MS.gene049681 | MS.gene055277 | 0.816431 | 5.55E-52 | -1.69E-46 |
| MS.gene049681 | MS.gene055428 | 0.804874 | 1.75E-49 | -1.69E-46 |
| MS.gene049681 | MS.gene055604 | 0.830884 | 2.28E-55 | -1.69E-46 |
| MS.gene049681 | MS.gene056191 | 0.849513 | 3.08E-60 | -1.69E-46 |
| MS.gene049681 | MS.gene05702 | 0.828393 | 9.22E-55 | -1.69E-46 |
| MS.gene049681 | MS.gene057255 | 0.806248 | 9.02E-50 | -1.69E-46 |
| MS.gene049681 | MS.gene057749 | 0.826191 | 3.11E-54 | -1.69E-46 |
| MS.gene049681 | MS.gene057823 | 0.82772 | 1.34E-54 | -1.69E-46 |
| MS.gene049681 | MS.gene057826 | 0.808445 | 3.09E-50 | -1.69E-46 |
| MS.gene049681 | MS.gene058002 | 0.806014 | 1.01E-49 | -1.69E-46 |
| MS.gene049681 | MS.gene05811 | 0.808387 | 3.18E-50 | -1.69E-46 |
| MS.gene049681 | MS.gene05907 | 0.817761 | 2.79E-52 | -1.69E-46 |
| MS.gene049681 | MS.gene059597 | 0.802579 | 5.25E-49 | -1.69E-46 |
| MS.gene049681 | MS.gene060005 | 0.802212 | 6.24E-49 | -1.69E-46 |
| MS.gene049681 | MS.gene06037 | 0.81569 | 8.12E-52 | -1.69E-46 |
| MS.gene049681 | MS.gene060559 | 0.805101 | 1.57E-49 | -1.69E-46 |
| MS.gene049681 | MS.gene061049 | 0.814654 | 1.38E-51 | -1.69E-46 |
| MS.gene049681 | MS.gene061578 | 0.990909 | 6.30E-185 | -1.69E-46 |
| MS.gene049681 | MS.gene061688 | 0.800602 | 1.33E-48 | -1.69E-46 |
| MS.gene049681 | MS.gene061772 | 0.80321 | 3.89E-49 | -1.69E-46 |
| MS.gene049681 | MS.gene062849 | 0.832222 | 1.07E-55 | -1.69E-46 |
| MS.gene049681 | MS.gene063074 | 0.81695 | 4.25E-52 | -1.69E-46 |
| MS.gene049681 | MS.gene064168 | 0.801107 | 1.05E-48 | -1.69E-46 |
| MS.gene049681 | MS.gene064621 | 0.805256 | 1.46E-49 | -1.69E-46 |
| MS.gene049681 | MS.gene06470 | 0.826139 | 3.20E-54 | -1.69E-46 |
| MS.gene049681 | MS.gene065042 | 0.800068 | 1.71E-48 | -1.69E-46 |
| MS.gene049681 | MS.gene066388 | 0.815236 | 1.02E-51 | -1.69E-46 |
| MS.gene049681 | MS.gene06821 | 0.812214 | 4.74E-51 | -1.69E-46 |
| MS.gene049681 | MS.gene068612 | 0.818917 | 1.53E-52 | -1.69E-46 |
| MS.gene049681 | MS.gene068614 | 0.80381 | 2.92E-49 | -1.69E-46 |
| MS.gene049681 | MS.gene069145 | 0.804931 | 1.70E-49 | -1.69E-46 |
| MS.gene049681 | MS.gene06972 | 0.824639 | 7.24E-54 | -1.69E-46 |
| MS.gene049681 | MS.gene069859 | 0.812628 | 3.85E-51 | -1.69E-46 |
| MS.gene049681 | MS.gene070164 | 0.827395 | 1.60E-54 | -1.69E-46 |
| MS.gene049681 | MS.gene070515 | 0.810128 | 1.34E-50 | -1.69E-46 |
| MS.gene049681 | MS.gene070789 | 0.803884 | 2.82E-49 | -1.69E-46 |
| MS.gene049681 | MS.gene071062 | 0.871868 | 4.92E-67 | -1.69E-46 |
| MS.gene049681 | MS.gene07115 | 0.800371 | 1.49E-48 | -1.69E-46 |
| MS.gene049681 | MS.gene072063 | 0.800146 | 1.65E-48 | -1.69E-46 |
| MS.gene049681 | MS.gene072196 | 0.824707 | 6.98E-54 | -1.69E-46 |
| MS.gene049681 | MS.gene072897 | 0.872404 | 3.26E-67 | -1.69E-46 |
| MS.gene049681 | MS.gene07596 | 0.812031 | 5.20E-51 | -1.69E-46 |
| MS.gene049681 | MS.gene09574 | 0.838061 | 3.60E-57 | -1.69E-46 |
| MS.gene049681 | MS.gene20264 | 0.814869 | 1.24E-51 | -1.69E-46 |
| MS.gene049681 | MS.gene20275 | 0.822791 | 1.96E-53 | -1.69E-46 |
| MS.gene049681 | MS.gene20612 | 0.803327 | 3.68E-49 | -1.69E-46 |
| MS.gene049681 | MS.gene20988 | 0.801042 | 1.09E-48 | -1.69E-46 |
| MS.gene049681 | MS.gene21136 | 0.829873 | 4.03E-55 | -1.69E-46 |
| MS.gene049681 | MS.gene22295 | 0.827637 | 1.40E-54 | -1.69E-46 |
| MS.gene049681 | MS.gene22296 | 0.848224 | 7.02E-60 | -1.69E-46 |
| MS.gene049681 | MS.gene22666 | 0.802293 | 6.01E-49 | -1.69E-46 |
| MS.gene049681 | MS.gene23787 | 0.808674 | 2.76E-50 | -1.69E-46 |
| MS.gene049681 | MS.gene24053 | 0.815436 | 9.26E-52 | -1.69E-46 |
| MS.gene049681 | MS.gene24098 | 0.813509 | 2.47E-51 | -1.69E-46 |
| MS.gene049681 | MS.gene24247 | 0.808533 | 2.96E-50 | -1.69E-46 |
| MS.gene049681 | MS.gene25859 | 0.836287 | 1.02E-56 | -1.69E-46 |
| MS.gene049681 | MS.gene25988 | 0.8033 | 3.72E-49 | -1.69E-46 |
| MS.gene049681 | MS.gene26999 | 0.814315 | 1.64E-51 | -1.69E-46 |
| MS.gene049681 | MS.gene28865 | 0.818389 | 2.01E-52 | -1.69E-46 |
| MS.gene049681 | MS.gene28998 | 0.808499 | 3.01E-50 | -1.69E-46 |
| MS.gene049681 | MS.gene29105 | 0.820651 | 6.13E-53 | -1.69E-46 |
| MS.gene049681 | MS.gene29760 | 0.815467 | 9.11E-52 | -1.69E-46 |
| MS.gene049681 | MS.gene29762 | 0.803738 | 3.02E-49 | -1.69E-46 |
| MS.gene049681 | MS.gene31030 | 0.814777 | 1.30E-51 | -1.69E-46 |
| MS.gene049681 | MS.gene32626 | 0.875691 | 2.52E-68 | -1.69E-46 |
| MS.gene049681 | MS.gene34464 | 0.801303 | 9.60E-49 | -1.69E-46 |
| MS.gene049681 | MS.gene35480 | 0.811739 | 6.02E-51 | -1.69E-46 |
| MS.gene049681 | MS.gene35805 | 0.823412 | 1.40E-53 | -1.69E-46 |
| MS.gene049681 | MS.gene36610 | 0.8151 | 1.10E-51 | -1.69E-46 |
| MS.gene049681 | MS.gene36722 | 0.808734 | 2.68E-50 | -1.69E-46 |
| MS.gene049681 | MS.gene36889 | 0.802504 | 5.44E-49 | -1.69E-46 |
| MS.gene049681 | MS.gene37233 | 0.814612 | 1.41E-51 | -1.69E-46 |
| MS.gene049681 | MS.gene39064 | 0.8114 | 7.13E-51 | -1.69E-46 |
| MS.gene049681 | MS.gene39104 | 0.80241 | 5.68E-49 | -1.69E-46 |
| MS.gene049681 | MS.gene39360 | 0.807658 | 4.54E-50 | -1.69E-46 |
| MS.gene049681 | MS.gene39805 | 0.828029 | 1.13E-54 | -1.69E-46 |
| MS.gene049681 | MS.gene39912 | 0.810057 | 1.39E-50 | -1.69E-46 |
| MS.gene049681 | MS.gene40751 | 0.802844 | 4.63E-49 | -1.69E-46 |
| MS.gene049681 | MS.gene40773 | 0.808353 | 3.23E-50 | -1.69E-46 |
| MS.gene049681 | MS.gene42660 | 0.801674 | 8.06E-49 | -1.69E-46 |
| MS.gene049681 | MS.gene43403 | 0.817248 | 3.64E-52 | -1.69E-46 |
| MS.gene049681 | MS.gene43563 | 0.804838 | 1.78E-49 | -1.69E-46 |
| MS.gene049681 | MS.gene43587 | 0.815118 | 1.09E-51 | -1.69E-46 |
| MS.gene049681 | MS.gene43589 | 0.834514 | 2.87E-56 | -1.69E-46 |
| MS.gene049681 | MS.gene43822 | 0.815476 | 9.07E-52 | -1.69E-46 |
| MS.gene049681 | MS.gene43899 | 0.805728 | 1.16E-49 | -1.69E-46 |
| MS.gene049681 | MS.gene43919 | 0.818069 | 2.38E-52 | -1.69E-46 |
| MS.gene049681 | MS.gene43933 | 0.819937 | 8.93E-53 | -1.69E-46 |
| MS.gene049681 | MS.gene44224 | 0.822244 | 2.63E-53 | -1.69E-46 |
| MS.gene049681 | MS.gene44649 | 0.831887 | 1.29E-55 | -1.69E-46 |
| MS.gene049681 | MS.gene44845 | 0.802332 | 5.90E-49 | -1.69E-46 |
| MS.gene049681 | MS.gene44915 | 0.812135 | 4.94E-51 | -1.69E-46 |
| MS.gene049681 | MS.gene45108 | 0.804487 | 2.11E-49 | -1.69E-46 |
| MS.gene049681 | MS.gene45771 | 0.80503 | 1.63E-49 | -1.69E-46 |
| MS.gene049681 | MS.gene46312 | 0.826843 | 2.17E-54 | -1.69E-46 |
| MS.gene049681 | MS.gene46313 | 0.818797 | 1.62E-52 | -1.69E-46 |
| MS.gene049681 | MS.gene49350 | 0.810141 | 1.34E-50 | -1.69E-46 |
| MS.gene049681 | MS.gene50575 | 0.818505 | 1.89E-52 | -1.69E-46 |
| MS.gene049681 | MS.gene52399 | 0.808671 | 2.76E-50 | -1.69E-46 |
| MS.gene049681 | MS.gene52600 | 0.80625 | 9.01E-50 | -1.69E-46 |
| MS.gene049681 | MS.gene53143 | 0.806064 | 9.86E-50 | -1.69E-46 |
| MS.gene049681 | MS.gene53332 | 0.803112 | 4.07E-49 | -1.69E-46 |
| MS.gene049681 | MS.gene53355 | 0.80029 | 1.54E-48 | -1.69E-46 |
| MS.gene049681 | MS.gene55321 | 0.81358 | 2.38E-51 | -1.69E-46 |
| MS.gene049681 | MS.gene57299 | 0.803468 | 3.44E-49 | -1.69E-46 |
| MS.gene049681 | MS.gene57491 | 0.804801 | 1.81E-49 | -1.69E-46 |
| MS.gene049681 | MS.gene57492 | 0.802303 | 5.98E-49 | -1.69E-46 |
| MS.gene049681 | MS.gene57566 | 0.804615 | 1.98E-49 | -1.69E-46 |
| MS.gene049681 | MS.gene58270 | 0.817286 | 3.57E-52 | -1.69E-46 |
| MS.gene049681 | MS.gene58499 | 0.804261 | 2.35E-49 | -1.69E-46 |
| MS.gene049681 | MS.gene58501 | 0.801699 | 7.96E-49 | -1.69E-46 |
| MS.gene049681 | MS.gene59730 | 0.826454 | 2.69E-54 | -1.69E-46 |
| MS.gene049681 | MS.gene60558 | 0.826784 | 2.24E-54 | -1.69E-46 |
| MS.gene049681 | MS.gene60909 | 0.80897 | 2.38E-50 | -1.69E-46 |
| MS.gene049681 | MS.gene62154 | 0.822366 | 2.46E-53 | -1.69E-46 |
| MS.gene049681 | MS.gene62286 | 0.818928 | 1.52E-52 | -1.69E-46 |
| MS.gene049681 | MS.gene62645 | 0.826576 | 2.51E-54 | -1.69E-46 |
| MS.gene049681 | MS.gene62813 | 0.804104 | 2.54E-49 | -1.69E-46 |
| MS.gene049681 | MS.gene63009 | 0.803855 | 2.86E-49 | -1.69E-46 |
| MS.gene049681 | MS.gene63820 | 0.807165 | 5.77E-50 | -1.69E-46 |
| MS.gene049681 | MS.gene64426 | 0.805536 | 1.27E-49 | -1.69E-46 |
| MS.gene049681 | MS.gene64621 | 0.821454 | 4.00E-53 | -1.69E-46 |
| MS.gene049681 | MS.gene64961 | 0.801518 | 8.67E-49 | -1.69E-46 |
| MS.gene049681 | MS.gene64994 | 0.806458 | 8.15E-50 | -1.69E-46 |
| MS.gene049681 | MS.gene65665 | 0.811155 | 8.06E-51 | -1.69E-46 |
| MS.gene049681 | MS.gene65683 | 0.851391 | 9.15E-61 | -1.69E-46 |
| MS.gene049681 | MS.gene65851 | 0.813553 | 2.41E-51 | -1.69E-46 |
| MS.gene049681 | MS.gene66157 | 0.822312 | 2.53E-53 | -1.69E-46 |
| MS.gene049681 | MS.gene67058 | 0.876832 | 1.02E-68 | -1.69E-46 |
| MS.gene049681 | MS.gene67204 | 0.816673 | 4.90E-52 | -1.69E-46 |
| MS.gene049681 | MS.gene67382 | 0.814234 | 1.71E-51 | -1.69E-46 |
| MS.gene049681 | MS.gene67422 | 0.803528 | 3.34E-49 | -1.69E-46 |
| MS.gene049681 | MS.gene68315 | 0.811337 | 7.36E-51 | -1.69E-46 |
| MS.gene049681 | MS.gene68338 | 0.809987 | 1.44E-50 | -1.69E-46 |
| MS.gene049681 | MS.gene68723 | 0.815564 | 8.67E-52 | -1.69E-46 |
| MS.gene049681 | MS.gene68734 | 0.804414 | 2.19E-49 | -1.69E-46 |
| MS.gene049681 | MS.gene68907 | 0.83932 | 1.70E-57 | -1.69E-46 |
| MS.gene049681 | MS.gene68938 | 0.832448 | 9.40E-56 | -1.69E-46 |
| MS.gene049681 | MS.gene68963 | 0.815245 | 1.02E-51 | -1.69E-46 |
| MS.gene049681 | MS.gene69001 | 0.802447 | 5.59E-49 | -1.69E-46 |
| MS.gene049681 | MS.gene69798 | 0.800013 | 1.76E-48 | -1.69E-46 |
| MS.gene049681 | MS.gene69862 | 0.820208 | 7.75E-53 | -1.69E-46 |
| MS.gene049681 | MS.gene70101 | 0.816437 | 5.53E-52 | -1.69E-46 |
| MS.gene049681 | MS.gene70102 | 0.81562 | 8.42E-52 | -1.69E-46 |
| MS.gene049681 | MS.gene70897 | 0.815406 | 9.40E-52 | -1.69E-46 |
| MS.gene049681 | MS.gene71456 | 0.834259 | 3.32E-56 | -1.69E-46 |
| MS.gene049681 | MS.gene71604 | 0.816999 | 4.14E-52 | -1.69E-46 |
| MS.gene049681 | MS.gene71664 | 0.816474 | 5.43E-52 | -1.69E-46 |
| MS.gene049681 | MS.gene72124 | 0.852519 | 4.38E-61 | -1.69E-46 |
| MS.gene049681 | MS.gene72242 | 0.80622 | 9.14E-50 | -1.69E-46 |
| MS.gene049681 | MS.gene72466 | 0.824066 | 9.87E-54 | -1.69E-46 |
| MS.gene049681 | MS.gene72477 | 0.800358 | 1.50E-48 | -1.69E-46 |
| MS.gene049681 | MS.gene73235 | 0.801849 | 7.41E-49 | -1.69E-46 |
| MS.gene049681 | MS.gene74992 | 0.824519 | 7.72E-54 | -1.69E-46 |
| MS.gene049681 | MS.gene75621 | -0.804607 | 1.99E-49 | -1.69E-46 |
| MS.gene049681 | MS.gene76554 | 0.820121 | 8.11E-53 | -1.69E-46 |
| MS.gene049681 | MS.gene77301 | 0.817904 | 2.59E-52 | -1.69E-46 |
| MS.gene049681 | MS.gene77302 | 0.869381 | 3.23E-66 | -1.69E-46 |
| MS.gene049681 | MS.gene78462 | 0.851352 | 9.39E-61 | -1.69E-46 |
| MS.gene049681 | MS.gene79217 | 0.803875 | 2.83E-49 | -1.69E-46 |
| MS.gene049681 | MS.gene79506 | 0.809091 | 2.25E-50 | -1.69E-46 |
| MS.gene049681 | MS.gene81435 | 0.802573 | 5.26E-49 | -1.69E-46 |
| MS.gene049681 | MS.gene81671 | 0.804357 | 2.25E-49 | -1.69E-46 |
| MS.gene049681 | MS.gene82362 | 0.81187 | 5.64E-51 | -1.69E-46 |
| MS.gene049681 | MS.gene85944 | 0.816485 | 5.40E-52 | -1.69E-46 |
| MS.gene049681 | MS.gene86932 | 0.82013 | 8.07E-53 | -1.69E-46 |
| MS.gene049681 | MS.gene87850 | 0.822239 | 2.64E-53 | -1.69E-46 |
| MS.gene049681 | MS.gene88667 | 0.826164 | 3.15E-54 | -1.69E-46 |
| MS.gene049681 | MS.gene89679 | 0.819269 | 1.27E-52 | -1.69E-46 |
| MS.gene049681 | MS.gene90444 | 0.805044 | 1.61E-49 | -1.69E-46 |
| MS.gene049681 | MS.gene90618 | 0.807222 | 5.62E-50 | -1.69E-46 |
| MS.gene049681 | MS.gene92401 | 0.846559 | 2.01E-59 | -1.69E-46 |
| MS.gene049681 | MS.gene92871 | 0.804479 | 2.12E-49 | -1.69E-46 |
| MS.gene049681 | MS.gene93379 | 0.80305 | 4.19E-49 | -1.69E-46 |
| MS.gene049681 | MS.gene93585 | 0.800472 | 1.42E-48 | -1.69E-46 |
| MS.gene049681 | MS.gene94333 | 0.850516 | 1.61E-60 | -1.69E-46 |
| MS.gene049681 | MS.gene94661 | 0.805746 | 1.15E-49 | -1.69E-46 |
| MS.gene049681 | MS.gene95864 | 0.825795 | 3.86E-54 | -1.69E-46 |
| MS.gene049681 | MS.gene95993 | 0.805019 | 1.63E-49 | -1.69E-46 |
| MS.gene049681 | MS.gene96276 | 0.818934 | 1.51E-52 | -1.69E-46 |
| MS.gene049681 | MS.gene96371 | 0.832781 | 7.77E-56 | -1.69E-46 |
| MS.gene049681 | MS.gene96656 | 0.803474 | 3.43E-49 | -1.69E-46 |
| MS.gene049681 | MS.gene96864 | 0.809407 | 1.92E-50 | -1.69E-46 |
| MS.gene049681 | MS.gene97679 | 0.809223 | 2.10E-50 | -1.69E-46 |
| MS.gene049681 | MS.gene97706 | 0.815127 | 1.08E-51 | -1.69E-46 |
| MS.gene049681 | MS.gene98287 | 0.809987 | 1.44E-50 | -1.69E-46 |
| MS.gene049681 | MS.gene98786 | 0.859318 | 4.49E-63 | -1.69E-46 |
| MS.gene049681 | MS.gene99360 | 0.8033 | 3.72E-49 | -1.69E-46 |
| MS.gene049681 | MS.gene99375 | 0.842647 | 2.28E-58 | -1.69E-46 |
| MS.gene049681 | MS.gene99622 | 0.831568 | 1.55E-55 | -1.69E-46 |
| MS.gene049681 | MS.gene99854 | 0.808434 | 3.10E-50 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049681.t1 | MTR_3g064420 | 91.924 | 582 | 9 | 2 | 1 | 544 | 1 | 582 | 0.0 | 1094 |
| MS.gene049681.t1 | MTR_8g074040 | 48.288 | 555 | 234 | 7 | 1 | 516 | 43 | 583 | 0.0 | 550 |
| MS.gene049681.t1 | MTR_5g008800 | 48.282 | 553 | 235 | 5 | 1 | 516 | 1 | 539 | 0.0 | 545 |
| MS.gene049681.t1 | MTR_5g076240 | 50.712 | 562 | 212 | 8 | 1 | 514 | 1 | 545 | 0.0 | 540 |
| MS.gene049681.t1 | MTR_4g121600 | 48.474 | 557 | 237 | 8 | 1 | 514 | 7 | 556 | 3.31e-180 | 519 |
| MS.gene049681.t1 | MTR_2g044180 | 47.935 | 557 | 240 | 7 | 1 | 514 | 7 | 556 | 7.59e-179 | 516 |
| MS.gene049681.t1 | MTR_5g076220 | 48.921 | 556 | 232 | 7 | 1 | 514 | 1 | 546 | 2.42e-175 | 507 |
| MS.gene049681.t1 | MTR_5g008820 | 45.173 | 549 | 252 | 5 | 1 | 514 | 1 | 535 | 5.02e-175 | 505 |
| MS.gene049681.t1 | MTR_5g076200 | 47.662 | 556 | 239 | 8 | 1 | 514 | 1 | 546 | 4.26e-171 | 496 |
| MS.gene049681.t1 | MTR_0161s0050 | 46.441 | 562 | 239 | 7 | 1 | 514 | 1 | 548 | 8.41e-165 | 480 |
| MS.gene049681.t1 | MTR_8g074040 | 48.643 | 479 | 193 | 7 | 77 | 516 | 1 | 465 | 3.39e-164 | 476 |
| MS.gene049681.t1 | MTR_8g074120 | 47.239 | 489 | 205 | 7 | 67 | 516 | 20 | 494 | 1.83e-159 | 464 |
| MS.gene049681.t1 | MTR_2g044180 | 46.822 | 472 | 201 | 7 | 86 | 514 | 1 | 465 | 3.90e-142 | 419 |
| MS.gene049681.t1 | MTR_5g023730 | 38.267 | 554 | 284 | 11 | 3 | 514 | 4 | 541 | 1.71e-122 | 371 |
| MS.gene049681.t1 | MTR_0803s0020 | 30.037 | 536 | 305 | 11 | 14 | 509 | 235 | 740 | 1.30e-55 | 202 |
| MS.gene049681.t1 | MTR_2g105570 | 28.200 | 539 | 305 | 17 | 25 | 512 | 37 | 544 | 2.16e-42 | 159 |
| MS.gene049681.t1 | MTR_5g007640 | 27.390 | 544 | 312 | 14 | 18 | 512 | 73 | 582 | 5.65e-40 | 153 |
| MS.gene049681.t1 | MTR_4g057730 | 25.547 | 548 | 326 | 14 | 14 | 514 | 27 | 539 | 1.04e-38 | 149 |
| MS.gene049681.t1 | MTR_2g095510 | 27.978 | 554 | 304 | 19 | 14 | 515 | 27 | 537 | 1.92e-37 | 145 |
| MS.gene049681.t1 | MTR_3g460770 | 25.641 | 546 | 312 | 16 | 19 | 512 | 33 | 536 | 8.63e-36 | 141 |
| MS.gene049681.t1 | MTR_1569s0010 | 32.249 | 369 | 176 | 12 | 192 | 511 | 186 | 529 | 2.50e-34 | 136 |
| MS.gene049681.t1 | MTR_3g035130 | 28.366 | 557 | 296 | 18 | 15 | 517 | 5 | 512 | 2.60e-34 | 136 |
| MS.gene049681.t1 | MTR_1g063110 | 26.642 | 548 | 315 | 18 | 14 | 509 | 28 | 540 | 8.13e-34 | 135 |
| MS.gene049681.t1 | MTR_4g005750 | 27.505 | 549 | 304 | 18 | 25 | 519 | 36 | 544 | 8.36e-34 | 135 |
| MS.gene049681.t1 | MTR_1g026310 | 24.857 | 523 | 308 | 12 | 37 | 509 | 65 | 552 | 4.79e-32 | 130 |
| MS.gene049681.t1 | MTR_8g039720 | 24.528 | 530 | 303 | 14 | 37 | 509 | 62 | 551 | 7.47e-32 | 129 |
| MS.gene049681.t1 | MTR_4g128337 | 25.818 | 550 | 312 | 17 | 18 | 512 | 35 | 543 | 1.02e-31 | 129 |
| MS.gene049681.t1 | MTR_1g063120 | 25.405 | 555 | 317 | 16 | 14 | 509 | 28 | 544 | 3.83e-30 | 124 |
| MS.gene049681.t1 | MTR_1g090737 | 26.255 | 518 | 310 | 17 | 43 | 519 | 82 | 568 | 9.27e-29 | 120 |
| MS.gene049681.t1 | MTR_1g073180 | 24.277 | 519 | 299 | 12 | 39 | 512 | 60 | 529 | 1.83e-27 | 116 |
| MS.gene049681.t1 | MTR_1054s0020 | 25.996 | 527 | 313 | 18 | 27 | 514 | 281 | 769 | 2.24e-27 | 117 |
| MS.gene049681.t1 | MTR_4g057730 | 24.576 | 472 | 281 | 13 | 14 | 438 | 27 | 470 | 4.67e-27 | 114 |
| MS.gene049681.t1 | MTR_3g035130 | 27.328 | 494 | 268 | 14 | 15 | 455 | 5 | 460 | 1.60e-25 | 110 |
| MS.gene049681.t1 | MTR_4g011790 | 26.531 | 392 | 212 | 13 | 179 | 510 | 217 | 592 | 3.51e-25 | 110 |
| MS.gene049681.t1 | MTR_4g011790 | 26.463 | 393 | 213 | 13 | 179 | 511 | 217 | 593 | 4.12e-25 | 110 |
| MS.gene049681.t1 | MTR_4g013210 | 27.119 | 354 | 200 | 13 | 189 | 510 | 71 | 398 | 2.81e-24 | 105 |
| MS.gene049681.t1 | MTR_2g030240 | 23.845 | 541 | 316 | 17 | 39 | 510 | 27 | 540 | 2.96e-24 | 107 |
| MS.gene049681.t1 | MTR_5g027480 | 24.811 | 528 | 301 | 18 | 36 | 510 | 64 | 548 | 3.19e-24 | 107 |
| MS.gene049681.t1 | MTR_4g013210 | 26.667 | 390 | 197 | 13 | 189 | 510 | 71 | 439 | 6.39e-24 | 105 |
| MS.gene049681.t1 | MTR_4g013210 | 27.119 | 354 | 200 | 13 | 189 | 510 | 223 | 550 | 7.35e-24 | 105 |
| MS.gene049681.t1 | MTR_3g088870 | 27.123 | 365 | 196 | 10 | 194 | 509 | 207 | 550 | 1.49e-23 | 104 |
| MS.gene049681.t1 | MTR_3g088880 | 27.446 | 368 | 188 | 12 | 194 | 509 | 208 | 548 | 8.06e-23 | 102 |
| MS.gene049681.t1 | MTR_4g011790 | 28.980 | 245 | 155 | 7 | 269 | 510 | 373 | 601 | 4.86e-22 | 100 |
| MS.gene049681.t1 | MTR_1g073180 | 23.566 | 488 | 279 | 12 | 39 | 481 | 82 | 520 | 5.79e-22 | 99.8 |
| MS.gene049681.t1 | MTR_2g030240 | 25.954 | 393 | 221 | 14 | 180 | 510 | 62 | 446 | 7.03e-22 | 99.0 |
| MS.gene049681.t1 | MTR_4g077900 | 34.194 | 155 | 94 | 2 | 357 | 510 | 324 | 471 | 9.88e-22 | 98.6 |
| MS.gene049681.t1 | MTR_5g027500 | 36.129 | 155 | 91 | 2 | 357 | 510 | 414 | 561 | 1.10e-21 | 99.0 |
| MS.gene049681.t1 | MTR_1586s0010 | 24.194 | 372 | 216 | 11 | 39 | 363 | 69 | 421 | 6.68e-21 | 95.9 |
| MS.gene049681.t1 | MTR_4g057730 | 23.516 | 455 | 273 | 13 | 14 | 421 | 27 | 453 | 7.42e-21 | 95.9 |
| MS.gene049681.t1 | MTR_2g095510 | 26.949 | 449 | 240 | 18 | 14 | 410 | 27 | 439 | 8.92e-20 | 92.4 |
| MS.gene049681.t1 | MTR_4g013210 | 26.503 | 366 | 180 | 13 | 189 | 486 | 223 | 567 | 8.08e-18 | 87.0 |
| MS.gene049681.t1 | MTR_7g084850 | 33.533 | 167 | 102 | 3 | 352 | 513 | 558 | 720 | 7.79e-15 | 78.2 |
| MS.gene049681.t1 | MTR_7g109830 | 31.633 | 196 | 117 | 6 | 239 | 432 | 362 | 542 | 1.87e-13 | 73.6 |
| MS.gene049681.t1 | MTR_3g087980 | 29.520 | 271 | 130 | 12 | 269 | 514 | 422 | 656 | 4.61e-13 | 72.4 |
| MS.gene049681.t1 | MTR_1g030290 | 32.948 | 173 | 94 | 6 | 269 | 432 | 424 | 583 | 6.73e-12 | 68.6 |
| MS.gene049681.t1 | MTR_1g086600 | 31.737 | 167 | 99 | 6 | 269 | 432 | 412 | 566 | 2.03e-11 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049681.t1 | AT1G65880 | 58.596 | 570 | 182 | 6 | 1 | 523 | 1 | 563 | 0.0 | 652 |
| MS.gene049681.t1 | AT1G65890 | 57.785 | 578 | 194 | 6 | 1 | 533 | 1 | 573 | 0.0 | 651 |
| MS.gene049681.t1 | AT1G66120 | 56.110 | 581 | 203 | 6 | 1 | 538 | 1 | 572 | 0.0 | 642 |
| MS.gene049681.t1 | AT1G68270 | 56.506 | 538 | 213 | 6 | 1 | 523 | 1 | 532 | 0.0 | 591 |
| MS.gene049681.t1 | AT1G20560 | 46.914 | 567 | 246 | 5 | 1 | 526 | 3 | 555 | 0.0 | 525 |
| MS.gene049681.t1 | AT3G16910 | 49.372 | 557 | 233 | 8 | 1 | 514 | 9 | 559 | 2.27e-177 | 512 |
| MS.gene049681.t1 | AT5G16340 | 46.043 | 556 | 244 | 6 | 1 | 514 | 1 | 542 | 1.87e-175 | 506 |
| MS.gene049681.t1 | AT1G21530 | 47.080 | 548 | 242 | 7 | 9 | 516 | 9 | 548 | 6.28e-174 | 503 |
| MS.gene049681.t1 | AT5G16370 | 45.863 | 556 | 245 | 6 | 1 | 514 | 1 | 542 | 9.83e-174 | 502 |
| MS.gene049681.t1 | AT2G17650 | 47.143 | 560 | 239 | 6 | 1 | 513 | 48 | 597 | 3.39e-173 | 503 |
| MS.gene049681.t1 | AT1G21530 | 47.070 | 546 | 243 | 8 | 9 | 516 | 9 | 546 | 1.49e-171 | 496 |
| MS.gene049681.t1 | AT1G21540 | 46.377 | 552 | 241 | 7 | 9 | 516 | 9 | 549 | 1.44e-169 | 491 |
| MS.gene049681.t1 | AT1G75960 | 45.683 | 556 | 246 | 5 | 1 | 514 | 1 | 542 | 1.59e-166 | 484 |
| MS.gene049681.t1 | AT1G77240 | 44.727 | 550 | 248 | 7 | 9 | 516 | 9 | 544 | 3.63e-165 | 480 |
| MS.gene049681.t1 | AT1G20560 | 46.232 | 491 | 209 | 5 | 77 | 526 | 1 | 477 | 1.14e-150 | 441 |
| MS.gene049681.t1 | AT1G76290 | 43.705 | 556 | 250 | 9 | 1 | 514 | 1 | 535 | 1.72e-142 | 422 |
| MS.gene049681.t1 | AT3G21240 | 27.357 | 541 | 314 | 13 | 19 | 512 | 41 | 549 | 5.19e-45 | 167 |
| MS.gene049681.t1 | AT3G21230 | 27.810 | 525 | 298 | 11 | 37 | 512 | 71 | 563 | 7.33e-41 | 155 |
| MS.gene049681.t1 | AT1G51680 | 27.839 | 546 | 310 | 15 | 19 | 512 | 43 | 556 | 7.34e-39 | 150 |
| MS.gene049681.t1 | AT4G05160 | 26.895 | 554 | 309 | 17 | 17 | 515 | 30 | 542 | 2.05e-37 | 145 |
| MS.gene049681.t1 | AT1G65060 | 27.422 | 547 | 306 | 19 | 18 | 512 | 52 | 559 | 3.51e-37 | 145 |
| MS.gene049681.t1 | AT1G20510 | 26.047 | 549 | 301 | 20 | 18 | 509 | 36 | 536 | 8.90e-36 | 141 |
| MS.gene049681.t1 | AT1G20480 | 26.718 | 524 | 295 | 16 | 37 | 509 | 72 | 557 | 1.20e-35 | 140 |
| MS.gene049681.t1 | AT1G20500 | 23.941 | 543 | 320 | 15 | 18 | 509 | 42 | 542 | 7.45e-35 | 138 |
| MS.gene049681.t1 | AT3G21240 | 26.709 | 468 | 271 | 12 | 19 | 439 | 41 | 483 | 2.24e-33 | 133 |
| MS.gene049681.t1 | AT3G21240 | 26.709 | 468 | 271 | 12 | 19 | 439 | 41 | 483 | 2.24e-33 | 133 |
| MS.gene049681.t1 | AT3G48990 | 27.447 | 521 | 276 | 16 | 40 | 506 | 31 | 503 | 5.84e-33 | 132 |
| MS.gene049681.t1 | AT1G51680 | 27.184 | 515 | 291 | 15 | 19 | 481 | 43 | 525 | 1.21e-32 | 132 |
| MS.gene049681.t1 | AT5G38120 | 26.519 | 543 | 305 | 17 | 18 | 509 | 43 | 542 | 1.40e-32 | 132 |
| MS.gene049681.t1 | AT4G19010 | 25.141 | 533 | 307 | 15 | 31 | 510 | 62 | 555 | 3.58e-32 | 130 |
| MS.gene049681.t1 | AT3G21230 | 26.518 | 494 | 282 | 11 | 37 | 481 | 71 | 532 | 3.46e-31 | 127 |
| MS.gene049681.t1 | AT5G63380 | 25.641 | 546 | 292 | 19 | 17 | 509 | 66 | 550 | 1.31e-30 | 126 |
| MS.gene049681.t1 | AT1G62940 | 25.408 | 551 | 318 | 15 | 14 | 512 | 26 | 535 | 2.07e-29 | 122 |
| MS.gene049681.t1 | AT1G20510 | 26.151 | 478 | 255 | 18 | 18 | 438 | 36 | 472 | 3.78e-28 | 117 |
| MS.gene049681.t1 | AT5G38120 | 26.408 | 515 | 285 | 17 | 18 | 481 | 43 | 514 | 4.85e-28 | 118 |
| MS.gene049681.t1 | AT1G30520 | 25.090 | 554 | 336 | 16 | 20 | 512 | 13 | 548 | 8.86e-28 | 117 |
| MS.gene049681.t1 | AT1G30520 | 25.090 | 554 | 336 | 16 | 20 | 512 | 13 | 548 | 8.86e-28 | 117 |
| MS.gene049681.t1 | AT1G51680 | 27.061 | 473 | 268 | 14 | 19 | 439 | 43 | 490 | 5.45e-27 | 114 |
| MS.gene049681.t1 | AT3G21230 | 26.549 | 452 | 258 | 10 | 37 | 439 | 71 | 497 | 1.90e-26 | 113 |
| MS.gene049681.t1 | AT1G65060 | 26.742 | 445 | 242 | 17 | 18 | 410 | 52 | 464 | 1.29e-23 | 104 |
| MS.gene049681.t1 | AT5G38120 | 25.424 | 472 | 265 | 13 | 18 | 438 | 43 | 478 | 5.43e-23 | 102 |
| MS.gene049681.t1 | AT5G38120 | 25.424 | 472 | 265 | 13 | 18 | 438 | 43 | 478 | 5.43e-23 | 102 |
| MS.gene049681.t1 | AT1G20510 | 25.778 | 450 | 236 | 18 | 18 | 410 | 36 | 444 | 4.67e-22 | 99.8 |
| MS.gene049681.t1 | AT3G16170 | 24.332 | 374 | 223 | 10 | 189 | 510 | 236 | 601 | 3.18e-20 | 94.7 |
| MS.gene049681.t1 | AT5G36880 | 32.335 | 167 | 104 | 3 | 352 | 513 | 503 | 665 | 9.22e-14 | 74.7 |
| MS.gene049681.t1 | AT5G36880 | 32.335 | 167 | 104 | 3 | 352 | 513 | 503 | 665 | 9.22e-14 | 74.7 |
| MS.gene049681.t1 | AT5G36880 | 32.335 | 167 | 104 | 3 | 352 | 513 | 503 | 665 | 9.22e-14 | 74.7 |
| MS.gene049681.t1 | AT5G36880 | 32.335 | 167 | 104 | 3 | 352 | 513 | 503 | 665 | 9.22e-14 | 74.7 |
| MS.gene049681.t1 | AT5G36880 | 32.335 | 167 | 104 | 3 | 352 | 513 | 553 | 715 | 9.74e-14 | 74.7 |
| MS.gene049681.t1 | AT1G64400 | 33.140 | 172 | 95 | 8 | 269 | 435 | 391 | 547 | 3.61e-13 | 72.8 |
| MS.gene049681.t1 | AT4G11030 | 32.418 | 182 | 102 | 9 | 260 | 435 | 381 | 547 | 8.74e-12 | 68.2 |
| MS.gene049681.t1 | AT1G77590 | 32.558 | 172 | 96 | 6 | 269 | 432 | 274 | 433 | 9.30e-12 | 68.2 |
| MS.gene049681.t1 | AT1G77590 | 32.558 | 172 | 96 | 6 | 269 | 432 | 420 | 579 | 1.09e-11 | 68.2 |
| MS.gene049681.t1 | AT4G23850 | 28.571 | 196 | 117 | 7 | 260 | 443 | 381 | 565 | 3.70e-11 | 66.2 |
| MS.gene049681.t1 | AT2G04350 | 30.418 | 263 | 138 | 13 | 269 | 514 | 449 | 683 | 4.37e-11 | 66.2 |
| MS.gene049681.t1 | AT2G04350 | 30.418 | 263 | 138 | 13 | 269 | 514 | 449 | 683 | 4.37e-11 | 66.2 |
| MS.gene049681.t1 | AT2G47240 | 25.291 | 344 | 214 | 14 | 100 | 426 | 160 | 477 | 5.62e-11 | 65.5 |
| MS.gene049681.t1 | AT2G47240 | 25.291 | 344 | 214 | 14 | 100 | 426 | 219 | 536 | 8.33e-11 | 65.1 |
| MS.gene049681.t1 | AT2G47240 | 25.291 | 344 | 214 | 14 | 100 | 426 | 219 | 536 | 8.33e-11 | 65.1 |
| MS.gene049681.t1 | AT2G47240 | 25.291 | 344 | 214 | 14 | 100 | 426 | 219 | 536 | 8.33e-11 | 65.1 |
Find 135 sgRNAs with CRISPR-Local
Find 165 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAGAATTTACCACACTTTA+TGG | 0.126746 | 3.3:-57963595 | MS.gene049681:CDS |
| TTATGATTGACTTGATTATT+TGG | 0.170990 | 3.3:+57963450 | None:intergenic |
| TCTAAAGATGTGATTATTTC+AGG | 0.185792 | 3.3:-57963813 | MS.gene049681:CDS |
| CAAGGACTTTCACCCCATTT+TGG | 0.195490 | 3.3:+57963702 | None:intergenic |
| TATACATAAAGATGGTTATT+TGG | 0.207931 | 3.3:-57963850 | MS.gene049681:CDS |
| ATTTCTTCAGGAAGGTAATT+TGG | 0.214710 | 3.3:+57964614 | None:intergenic |
| ATCTTACCTGTTAAAGTCTT+TGG | 0.233560 | 3.3:+57963540 | None:intergenic |
| GCTCTCATCAAGAAAGTTAA+AGG | 0.239728 | 3.3:+57965473 | None:intergenic |
| AAGCGACGGCGAAAGCTTTC+GGG | 0.254708 | 3.3:-57963905 | MS.gene049681:CDS |
| TTTAATGTAACACATGCTTA+TGG | 0.280910 | 3.3:-57964164 | MS.gene049681:CDS |
| GATTTACCAAAGACTTTAAC+AGG | 0.288395 | 3.3:-57963546 | MS.gene049681:CDS |
| TTGCAATGCCACATCCAAAA+TGG | 0.293682 | 3.3:-57963716 | MS.gene049681:CDS |
| AATAAAACAGGTATCAGTTT+TGG | 0.306205 | 3.3:-57964951 | MS.gene049681:intron |
| TCATAATAATGACCAGATTA+TGG | 0.314754 | 3.3:-57963433 | MS.gene049681:CDS |
| GTATAGTTTGCTCGACATTT+TGG | 0.327519 | 3.3:+57965506 | None:intergenic |
| GAAAGTTAAAGGAGTGAGTA+TGG | 0.331539 | 3.3:+57965484 | None:intergenic |
| CATTCATCTTGAATTTCTTC+AGG | 0.339619 | 3.3:+57964602 | None:intergenic |
| GAAGCGACGGCGAAAGCTTT+CGG | 0.344503 | 3.3:-57963906 | MS.gene049681:CDS |
| TTTAATCCTTGGTTGGGAAA+TGG | 0.345052 | 3.3:-57964486 | MS.gene049681:CDS |
| TGGCTATAAACAACACCTTT+TGG | 0.356699 | 3.3:+57964536 | None:intergenic |
| TTCTTCCATGAGTAATCTTA+AGG | 0.361126 | 3.3:+57964757 | None:intergenic |
| GGTAATGTCCATAGATAAAC+TGG | 0.364652 | 3.3:+57964455 | None:intergenic |
| CGCATTGAGACGGTGGTTGA+TGG | 0.387285 | 3.3:+57964862 | None:intergenic |
| TCATACATTGCTGGAATGTT+TGG | 0.387598 | 3.3:+57964926 | None:intergenic |
| AAGTGAAACGGGTTCCTTCA+TGG | 0.397922 | 3.3:+57965417 | None:intergenic |
| TACCACAAAACACTTAGCTT+TGG | 0.397967 | 3.3:+57963497 | None:intergenic |
| TGGTAAATTCTTCCTACAAT+AGG | 0.411253 | 3.3:+57963605 | None:intergenic |
| TATGGACTAACTGAAGCAAC+AGG | 0.418017 | 3.3:-57964146 | MS.gene049681:CDS |
| GTAAGAGATGGGAAAACAAT+GGG | 0.423096 | 3.3:-57963981 | MS.gene049681:CDS |
| GATGTGTAATTCAATGTAAT+TGG | 0.423792 | 3.3:+57964575 | None:intergenic |
| TTTGAGTTTAATCCTTGGTT+GGG | 0.424831 | 3.3:-57964492 | MS.gene049681:CDS |
| TTAATCCTTGGTTGGGAAAT+GGG | 0.425386 | 3.3:-57964485 | MS.gene049681:CDS |
| TTTGTGAGTGGCAGAAGAAA+TGG | 0.427336 | 3.3:-57964112 | MS.gene049681:CDS |
| TTACCTATGTTCCATTGTAA+TGG | 0.427373 | 3.3:-57964437 | MS.gene049681:CDS |
| GAGCTCGCCTAGCCGGATTC+CGG | 0.428306 | 3.3:+57964667 | None:intergenic |
| TCTCCGGTGAATATACTAAC+TGG | 0.428686 | 3.3:-57964236 | MS.gene049681:CDS |
| CTTCATGGATGACTGAGGTT+CGG | 0.429624 | 3.3:+57965432 | None:intergenic |
| AAATGCATCTCATACATTGC+TGG | 0.433221 | 3.3:+57964917 | None:intergenic |
| GTTATTTGGAAATTAAAGAT+AGG | 0.433555 | 3.3:-57963836 | MS.gene049681:CDS |
| GACGGTGGTTGATGGTGTTT+AGG | 0.435440 | 3.3:+57964870 | None:intergenic |
| GACGAGATAGAGCCATAATC+TGG | 0.444504 | 3.3:+57963421 | None:intergenic |
| GTAGTGAACCAGTTTATCTA+TGG | 0.450766 | 3.3:-57964463 | MS.gene049681:CDS |
| TGCAATGCCACATCCAAAAT+GGG | 0.459922 | 3.3:-57963715 | MS.gene049681:CDS |
| GGGGATGGTTGGTTTAGAAC+TGG | 0.460142 | 3.3:-57963885 | MS.gene049681:CDS |
| ACACTTTATGGTACCTAAGA+TGG | 0.462947 | 3.3:-57963583 | MS.gene049681:CDS |
| GAGATTATGTTGAAGGGAAG+TGG | 0.465461 | 3.3:-57963957 | MS.gene049681:CDS |
| AGTTTGTGACCAAGTGAAAC+GGG | 0.471117 | 3.3:+57965406 | None:intergenic |
| CTGAAGAAATTCAAGATGAA+TGG | 0.471358 | 3.3:-57964601 | MS.gene049681:CDS |
| ATGGAGAGTGTGGTAAGAGA+TGG | 0.472523 | 3.3:-57963993 | MS.gene049681:CDS |
| CTATGTTCCATTGTAATGGT+TGG | 0.477230 | 3.3:-57964433 | MS.gene049681:CDS |
| TAAACACTCCCACCGGAATC+CGG | 0.478728 | 3.3:-57964679 | MS.gene049681:CDS |
| CTTTGAGTTTAATCCTTGGT+TGG | 0.482972 | 3.3:-57964493 | MS.gene049681:CDS |
| CGAAAGCTTTCGGGGATGGT+TGG | 0.487803 | 3.3:-57963896 | MS.gene049681:CDS |
| CGCCTCAGAGTGTCGAAGAA+TGG | 0.487931 | 3.3:+57964826 | None:intergenic |
| ACAGCAGCTTCTAAAACCTT+AGG | 0.490308 | 3.3:+57963741 | None:intergenic |
| AAGTTTGTGACCAAGTGAAA+CGG | 0.494196 | 3.3:+57965405 | None:intergenic |
| ACGGCGAAAGCTTTCGGGGA+TGG | 0.495228 | 3.3:-57963900 | MS.gene049681:CDS |
| TGCCACTCACAAACAAGTGC+TGG | 0.499001 | 3.3:+57964122 | None:intergenic |
| TGGTTTAGAACTGGTGATGT+TGG | 0.499794 | 3.3:-57963876 | MS.gene049681:CDS |
| ATGAGATAATTACCTATTGT+AGG | 0.504104 | 3.3:-57963617 | MS.gene049681:CDS |
| TGGAGAGTGTGGTAAGAGAT+GGG | 0.505965 | 3.3:-57963992 | MS.gene049681:CDS |
| ATTCGTATCAAAAGCAAAAG+AGG | 0.506420 | 3.3:-57964780 | MS.gene049681:CDS |
| AAGGGAAGTGGAATCATGAT+GGG | 0.506638 | 3.3:-57963945 | MS.gene049681:CDS |
| TGCAATATTGAGAGCACGGA+GGG | 0.514867 | 3.3:+57965355 | None:intergenic |
| CATCTTGAATTTCTTCAGGA+AGG | 0.517226 | 3.3:+57964606 | None:intergenic |
| AGGAAGCGAGGCGGCGACAC+CGG | 0.518047 | 3.3:+57965378 | None:intergenic |
| AGAGGCCTTAAGATTACTCA+TGG | 0.518068 | 3.3:-57964762 | MS.gene049681:CDS |
| CGTATTCGAGCTCGCCTAGC+CGG | 0.519450 | 3.3:+57964660 | None:intergenic |
| CTTGAGAAAATCGAGCCACT+TGG | 0.519790 | 3.3:-57964188 | MS.gene049681:CDS |
| ATGAAGGAACCCGTTTCACT+TGG | 0.520277 | 3.3:-57965415 | MS.gene049681:CDS |
| AGTACTTTGAGTTTAATCCT+TGG | 0.521867 | 3.3:-57964497 | MS.gene049681:CDS |
| CTCGCCTAGCCGGATTCCGG+TGG | 0.524552 | 3.3:+57964670 | None:intergenic |
| ATTACATTGAATTACACATC+AGG | 0.525480 | 3.3:-57964572 | MS.gene049681:CDS |
| CGAGCTCGAATACGAGCAAA+TGG | 0.527362 | 3.3:-57964651 | MS.gene049681:CDS |
| TGTTCTTTATAGTCATCCTA+AGG | 0.533616 | 3.3:-57963757 | MS.gene049681:CDS |
| CGATGCTTAAAGCGCGACAA+GGG | 0.533885 | 3.3:-57964064 | MS.gene049681:CDS |
| AACTGGTGGAGCACCACCCC+CGG | 0.535495 | 3.3:-57964219 | MS.gene049681:CDS |
| TGTGACACTAAGGAAGAATG+AGG | 0.538924 | 3.3:-57963673 | MS.gene049681:CDS |
| GAAGGGAAGTGGAATCATGA+TGG | 0.539328 | 3.3:-57963946 | MS.gene049681:CDS |
| GTTGGTGTTATACATAAAGA+TGG | 0.545404 | 3.3:-57963858 | MS.gene049681:CDS |
| AAAGAGAGTCATAAAATCTC+CGG | 0.548039 | 3.3:-57964252 | MS.gene049681:CDS |
| TCGAAGAATGGTGGCTATGT+TGG | 0.554863 | 3.3:+57964838 | None:intergenic |
| CAACCATTACAATGGAACAT+AGG | 0.559310 | 3.3:+57964434 | None:intergenic |
| CACTACCCATTTCCCAACCA+AGG | 0.560736 | 3.3:+57964480 | None:intergenic |
| CACGGAGGGAGGAAGCGAGG+CGG | 0.564152 | 3.3:+57965369 | None:intergenic |
| GGTACAACTTCAGAACCAAA+AGG | 0.565976 | 3.3:-57964551 | MS.gene049681:CDS |
| TCTTTGCAATATTGAGAGCA+CGG | 0.566149 | 3.3:+57965351 | None:intergenic |
| CATCTATCACAATCACTAGT+GGG | 0.570317 | 3.3:+57964705 | None:intergenic |
| TACGAGCAAATGGTTCATCA+TGG | 0.574224 | 3.3:-57964641 | MS.gene049681:CDS |
| GTAATGGTTGGACATTCACT+TGG | 0.575202 | 3.3:-57964421 | MS.gene049681:CDS |
| CTTGGTCACAAACTTATGAC+CGG | 0.576665 | 3.3:-57965397 | MS.gene049681:CDS |
| TAATGGTTGGACATTCACTT+GGG | 0.583819 | 3.3:-57964420 | MS.gene049681:CDS |
| GAGCACGGAGGGAGGAAGCG+AGG | 0.588763 | 3.3:+57965366 | None:intergenic |
| TCTTGAAACAATGGAGAGTG+TGG | 0.595422 | 3.3:-57964003 | MS.gene049681:CDS |
| GGCCAGCACTTGTTTGTGAG+TGG | 0.595693 | 3.3:-57964124 | MS.gene049681:CDS |
| TCATCTATCACAATCACTAG+TGG | 0.596057 | 3.3:+57964704 | None:intergenic |
| TGTGAAGAATCTTGAAACAA+TGG | 0.596126 | 3.3:-57964012 | MS.gene049681:CDS |
| ACTCCCACCGGAATCCGGCT+AGG | 0.597247 | 3.3:-57964674 | MS.gene049681:CDS |
| AGCGACGGCGAAAGCTTTCG+GGG | 0.597981 | 3.3:-57963904 | MS.gene049681:CDS |
| CGAACCTCAGTCATCCATGA+AGG | 0.598539 | 3.3:-57965431 | MS.gene049681:CDS |
| AAGAGATGGGAAAACAATGG+GGG | 0.600740 | 3.3:-57963979 | MS.gene049681:CDS |
| TTTCTCAAGTAGGGACGCCG+GGG | 0.601501 | 3.3:+57964202 | None:intergenic |
| CTATGTTGGCCGCATTGAGA+CGG | 0.602111 | 3.3:+57964852 | None:intergenic |
| TTTAGGACAGCACCAGCCAT+AGG | 0.602558 | 3.3:+57964887 | None:intergenic |
| TCGATGCTTAAAGCGCGACA+AGG | 0.604868 | 3.3:-57964065 | MS.gene049681:CDS |
| CCACCAGTTAGTATATTCAC+CGG | 0.607871 | 3.3:+57964233 | None:intergenic |
| CTCAGAGTGTCGAAGAATGG+TGG | 0.608683 | 3.3:+57964829 | None:intergenic |
| TGAATGTCCAACCATTACAA+TGG | 0.613092 | 3.3:+57964426 | None:intergenic |
| GGTAAGAGATGGGAAAACAA+TGG | 0.619269 | 3.3:-57963982 | MS.gene049681:CDS |
| ACTTGGGGTGTAGCTGCAAG+AGG | 0.619778 | 3.3:-57964404 | MS.gene049681:CDS |
| TGATTTATGTTGTGTTACTG+AGG | 0.621798 | 3.3:-57963640 | MS.gene049681:CDS |
| GATGATATAAACACTCCCAC+CGG | 0.622195 | 3.3:-57964686 | MS.gene049681:CDS |
| TAAGAGATGGGAAAACAATG+GGG | 0.626561 | 3.3:-57963980 | MS.gene049681:CDS |
| GATGCTTAAAGCGCGACAAG+GGG | 0.626984 | 3.3:-57964063 | MS.gene049681:CDS |
| TCGCCTAGCCGGATTCCGGT+GGG | 0.628633 | 3.3:+57964671 | None:intergenic |
| AATATTGAGAGCACGGAGGG+AGG | 0.632194 | 3.3:+57965358 | None:intergenic |
| CTTAGTGTCACAAAAGCACA+AGG | 0.636960 | 3.3:+57963684 | None:intergenic |
| TTCTCAAGTAGGGACGCCGG+GGG | 0.637975 | 3.3:+57964203 | None:intergenic |
| TGTTGGCCGCATTGAGACGG+TGG | 0.638475 | 3.3:+57964855 | None:intergenic |
| CACCATTCTTCGACACTCTG+AGG | 0.640216 | 3.3:-57964828 | MS.gene049681:CDS |
| TGTGTTACATTAAAACCAAG+TGG | 0.640733 | 3.3:+57964173 | None:intergenic |
| AATGGTTGGACATTCACTTG+GGG | 0.644019 | 3.3:-57964419 | MS.gene049681:CDS |
| CCGGTGAATATACTAACTGG+TGG | 0.647354 | 3.3:-57964233 | MS.gene049681:CDS |
| AAAGATGTGATTATTTCAGG+AGG | 0.649768 | 3.3:-57963810 | MS.gene049681:CDS |
| TACTTAAATAAGCACCTCTG+TGG | 0.656289 | 3.3:+57964516 | None:intergenic |
| ATCTTAGGTACCATAAAGTG+TGG | 0.661614 | 3.3:+57963585 | None:intergenic |
| AGGGAAGTGGAATCATGATG+GGG | 0.670807 | 3.3:-57963944 | MS.gene049681:CDS |
| GACACTAAGGAAGAATGAGG+AGG | 0.677688 | 3.3:-57963670 | MS.gene049681:CDS |
| TGGGGTGTAGCTGCAAGAGG+AGG | 0.680125 | 3.3:-57964401 | MS.gene049681:intron |
| GGTTCCTTCATGGATGACTG+AGG | 0.686748 | 3.3:+57965427 | None:intergenic |
| GGTGTTGTTTATAGCCACAG+AGG | 0.712162 | 3.3:-57964530 | MS.gene049681:CDS |
| ATGGACTAACTGAAGCAACA+GGG | 0.714883 | 3.3:-57964145 | MS.gene049681:CDS |
| TTGCAATATTGAGAGCACGG+AGG | 0.733139 | 3.3:+57965354 | None:intergenic |
| CATCAACCACCGTCTCAATG+CGG | 0.733801 | 3.3:-57964861 | MS.gene049681:CDS |
| GCAATGCCACATCCAAAATG+GGG | 0.748056 | 3.3:-57963714 | MS.gene049681:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAATATTGAAAATGAT+GGG | + | chr3.3:57964644-57964663 | None:intergenic | 10.0% |
| !! | TAAAATAATATTGAAAATGA+TGG | + | chr3.3:57964645-57964664 | None:intergenic | 10.0% |
| !!! | ATCATTTTCAATATTATTTT+AGG | - | chr3.3:57964644-57964663 | MS.gene049681:CDS | 10.0% |
| !! | TATTACAATATTTGATATTG+CGG | + | chr3.3:57963870-57963889 | None:intergenic | 15.0% |
| !! | GCGATTTATAAAAACTAAAT+TGG | - | chr3.3:57963951-57963970 | MS.gene049681:CDS | 20.0% |
| !! | GTTATTTGGAAATTAAAGAT+AGG | - | chr3.3:57965098-57965117 | MS.gene049681:intron | 20.0% |
| !! | TATACATAAAGATGGTTATT+TGG | - | chr3.3:57965084-57965103 | MS.gene049681:intron | 20.0% |
| !!! | TGGTTTTTGTTTAATAAAAC+AGG | - | chr3.3:57963971-57963990 | MS.gene049681:CDS | 20.0% |
| !!! | TTATGATTGACTTGATTATT+TGG | + | chr3.3:57965487-57965506 | None:intergenic | 20.0% |
| ! | ATGAGATAATTACCTATTGT+AGG | - | chr3.3:57965317-57965336 | MS.gene049681:intron | 25.0% |
| ! | ATTACATTGAATTACACATC+AGG | - | chr3.3:57964362-57964381 | MS.gene049681:intron | 25.0% |
| ! | CAAAATGCAGTATCAAATAT+TGG | + | chr3.3:57963846-57963865 | None:intergenic | 25.0% |
| ! | GATGTGTAATTCAATGTAAT+TGG | + | chr3.3:57964362-57964381 | None:intergenic | 25.0% |
| ! | TCATAATAATGACCAGATTA+TGG | - | chr3.3:57965501-57965520 | MS.gene049681:CDS | 25.0% |
| ! | TCTAAAGATGTGATTATTTC+AGG | - | chr3.3:57965121-57965140 | MS.gene049681:intron | 25.0% |
| ! | TGTCACATTATAGAGATTTA+TGG | + | chr3.3:57964606-57964625 | None:intergenic | 25.0% |
| ! | TTTAATGTAACACATGCTTA+TGG | - | chr3.3:57964770-57964789 | MS.gene049681:CDS | 25.0% |
| !! | AATAAAACAGGTATCAGTTT+TGG | - | chr3.3:57963983-57964002 | MS.gene049681:CDS | 25.0% |
| !!! | TTTTAAAGATAAAGAAGCGA+CGG | - | chr3.3:57965015-57965034 | MS.gene049681:intron | 25.0% |
| AAAGAGAGTCATAAAATCTC+CGG | - | chr3.3:57964682-57964701 | MS.gene049681:CDS | 30.0% | |
| AAAGATGTGATTATTTCAGG+AGG | - | chr3.3:57965124-57965143 | MS.gene049681:intron | 30.0% | |
| ATCTTACCTGTTAAAGTCTT+TGG | + | chr3.3:57965397-57965416 | None:intergenic | 30.0% | |
| ATTCGTATCAAAAGCAAAAG+AGG | - | chr3.3:57964154-57964173 | MS.gene049681:CDS | 30.0% | |
| ATTTCTTCAGGAAGGTAATT+TGG | + | chr3.3:57964323-57964342 | None:intergenic | 30.0% | |
| CATTCATCTTGAATTTCTTC+AGG | + | chr3.3:57964335-57964354 | None:intergenic | 30.0% | |
| CTGAAGAAATTCAAGATGAA+TGG | - | chr3.3:57964333-57964352 | MS.gene049681:intron | 30.0% | |
| GAAGAATTTACCACACTTTA+TGG | - | chr3.3:57965339-57965358 | MS.gene049681:intron | 30.0% | |
| GATTTACCAAAGACTTTAAC+AGG | - | chr3.3:57965388-57965407 | MS.gene049681:CDS | 30.0% | |
| TCCATAAAAACAACCATCTT+AGG | + | chr3.3:57965367-57965386 | None:intergenic | 30.0% | |
| TGATATCATATCCTAGATTG+CGG | + | chr3.3:57963808-57963827 | None:intergenic | 30.0% | |
| TGGTAAATTCTTCCTACAAT+AGG | + | chr3.3:57965332-57965351 | None:intergenic | 30.0% | |
| TGTGAAGAATCTTGAAACAA+TGG | - | chr3.3:57964922-57964941 | MS.gene049681:CDS | 30.0% | |
| TGTGTTACATTAAAACCAAG+TGG | + | chr3.3:57964764-57964783 | None:intergenic | 30.0% | |
| TGTTCTTTATAGTCATCCTA+AGG | - | chr3.3:57965177-57965196 | MS.gene049681:intron | 30.0% | |
| TTACCTATGTTCCATTGTAA+TGG | - | chr3.3:57964497-57964516 | MS.gene049681:CDS | 30.0% | |
| TTCTTCCATGAGTAATCTTA+AGG | + | chr3.3:57964180-57964199 | None:intergenic | 30.0% | |
| ! | AGTACTTTGAGTTTAATCCT+TGG | - | chr3.3:57964437-57964456 | MS.gene049681:CDS | 30.0% |
| ! | TGATTTATGTTGTGTTACTG+AGG | - | chr3.3:57965294-57965313 | MS.gene049681:intron | 30.0% |
| ! | TTTGAGTTTAATCCTTGGTT+GGG | - | chr3.3:57964442-57964461 | MS.gene049681:CDS | 30.0% |
| !! | GTTGGTGTTATACATAAAGA+TGG | - | chr3.3:57965076-57965095 | MS.gene049681:intron | 30.0% |
| !!! | ACCTAAGATGGTTGTTTTTA+TGG | - | chr3.3:57965363-57965382 | MS.gene049681:CDS | 30.0% |
| !!! | TAAGATGGTTGTTTTTATGG+AGG | - | chr3.3:57965366-57965385 | MS.gene049681:CDS | 30.0% |
| AAATGCATCTCATACATTGC+TGG | + | chr3.3:57964020-57964039 | None:intergenic | 35.0% | |
| AAGTTTGTGACCAAGTGAAA+CGG | + | chr3.3:57963532-57963551 | None:intergenic | 35.0% | |
| ACACTTTATGGTACCTAAGA+TGG | - | chr3.3:57965351-57965370 | MS.gene049681:CDS | 35.0% | |
| ATCTTAGGTACCATAAAGTG+TGG | + | chr3.3:57965352-57965371 | None:intergenic | 35.0% | |
| CAACCATTACAATGGAACAT+AGG | + | chr3.3:57964503-57964522 | None:intergenic | 35.0% | |
| CATCTATCACAATCACTAGT+GGG | + | chr3.3:57964232-57964251 | None:intergenic | 35.0% | |
| CATCTTGAATTTCTTCAGGA+AGG | + | chr3.3:57964331-57964350 | None:intergenic | 35.0% | |
| CTATGTTCCATTGTAATGGT+TGG | - | chr3.3:57964501-57964520 | MS.gene049681:CDS | 35.0% | |
| GAAAGTTAAAGGAGTGAGTA+TGG | + | chr3.3:57963453-57963472 | None:intergenic | 35.0% | |
| GCTCTCATCAAGAAAGTTAA+AGG | + | chr3.3:57963464-57963483 | None:intergenic | 35.0% | |
| GGTAATGTCCATAGATAAAC+TGG | + | chr3.3:57964482-57964501 | None:intergenic | 35.0% | |
| GTAAGAGATGGGAAAACAAT+GGG | - | chr3.3:57964953-57964972 | MS.gene049681:intron | 35.0% | |
| GTAGTGAACCAGTTTATCTA+TGG | - | chr3.3:57964471-57964490 | MS.gene049681:CDS | 35.0% | |
| TAAGAGATGGGAAAACAATG+GGG | - | chr3.3:57964954-57964973 | MS.gene049681:intron | 35.0% | |
| TAATGGTTGGACATTCACTT+GGG | - | chr3.3:57964514-57964533 | MS.gene049681:CDS | 35.0% | |
| TACCACAAAACACTTAGCTT+TGG | + | chr3.3:57965440-57965459 | None:intergenic | 35.0% | |
| TACTTAAATAAGCACCTCTG+TGG | + | chr3.3:57964421-57964440 | None:intergenic | 35.0% | |
| TCATACATTGCTGGAATGTT+TGG | + | chr3.3:57964011-57964030 | None:intergenic | 35.0% | |
| TCATCTATCACAATCACTAG+TGG | + | chr3.3:57964233-57964252 | None:intergenic | 35.0% | |
| TCTTTGCAATATTGAGAGCA+CGG | + | chr3.3:57963586-57963605 | None:intergenic | 35.0% | |
| TGAATGTCCAACCATTACAA+TGG | + | chr3.3:57964511-57964530 | None:intergenic | 35.0% | |
| TTAATCCTTGGTTGGGAAAT+GGG | - | chr3.3:57964449-57964468 | MS.gene049681:CDS | 35.0% | |
| TTTAATCCTTGGTTGGGAAA+TGG | - | chr3.3:57964448-57964467 | MS.gene049681:CDS | 35.0% | |
| ! | CTTTGAGTTTAATCCTTGGT+TGG | - | chr3.3:57964441-57964460 | MS.gene049681:CDS | 35.0% |
| ! | TGGCTATAAACAACACCTTT+TGG | + | chr3.3:57964401-57964420 | None:intergenic | 35.0% |
| ! | TTTATGACTCTCTTTTCGCT+TGG | + | chr3.3:57964677-57964696 | None:intergenic | 35.0% |
| !!! | GTATAGTTTGCTCGACATTT+TGG | + | chr3.3:57963431-57963450 | None:intergenic | 35.0% |
| AAGAGATGGGAAAACAATGG+GGG | - | chr3.3:57964955-57964974 | MS.gene049681:intron | 40.0% | |
| AAGGGAAGTGGAATCATGAT+GGG | - | chr3.3:57964989-57965008 | MS.gene049681:intron | 40.0% | |
| AATGGGGGAGATTATGTTGA+AGG | - | chr3.3:57964970-57964989 | MS.gene049681:intron | 40.0% | |
| AATGGTTGGACATTCACTTG+GGG | - | chr3.3:57964515-57964534 | MS.gene049681:CDS | 40.0% | |
| AGAGGCCTTAAGATTACTCA+TGG | - | chr3.3:57964172-57964191 | MS.gene049681:CDS | 40.0% | |
| AGTTTGTGACCAAGTGAAAC+GGG | + | chr3.3:57963531-57963550 | None:intergenic | 40.0% | |
| ATGGGGGAGATTATGTTGAA+GGG | - | chr3.3:57964971-57964990 | MS.gene049681:intron | 40.0% | |
| CCACCAGTTAGTATATTCAC+CGG | + | chr3.3:57964704-57964723 | None:intergenic | 40.0% | |
| CTTGGTCACAAACTTATGAC+CGG | - | chr3.3:57963537-57963556 | MS.gene049681:CDS | 40.0% | |
| GAGATTATGTTGAAGGGAAG+TGG | - | chr3.3:57964977-57964996 | MS.gene049681:intron | 40.0% | |
| GATGATATAAACACTCCCAC+CGG | - | chr3.3:57964248-57964267 | MS.gene049681:CDS | 40.0% | |
| GGTAAGAGATGGGAAAACAA+TGG | - | chr3.3:57964952-57964971 | MS.gene049681:intron | 40.0% | |
| GGTACAACTTCAGAACCAAA+AGG | - | chr3.3:57964383-57964402 | MS.gene049681:intron | 40.0% | |
| GTAATGGTTGGACATTCACT+TGG | - | chr3.3:57964513-57964532 | MS.gene049681:CDS | 40.0% | |
| TACGAGCAAATGGTTCATCA+TGG | - | chr3.3:57964293-57964312 | MS.gene049681:intron | 40.0% | |
| TCTCCGGTGAATATACTAAC+TGG | - | chr3.3:57964698-57964717 | MS.gene049681:CDS | 40.0% | |
| TCTTGAAACAATGGAGAGTG+TGG | - | chr3.3:57964931-57964950 | MS.gene049681:CDS | 40.0% | |
| TGCAATGCCACATCCAAAAT+GGG | - | chr3.3:57965219-57965238 | MS.gene049681:intron | 40.0% | |
| TGTGACACTAAGGAAGAATG+AGG | - | chr3.3:57965261-57965280 | MS.gene049681:intron | 40.0% | |
| TTGCAATGCCACATCCAAAA+TGG | - | chr3.3:57965218-57965237 | MS.gene049681:intron | 40.0% | |
| TTTGTGAGTGGCAGAAGAAA+TGG | - | chr3.3:57964822-57964841 | MS.gene049681:CDS | 40.0% | |
| ! | AGCCAAAGCTAAGTGTTTTG+TGG | - | chr3.3:57965435-57965454 | MS.gene049681:CDS | 40.0% |
| ! | ATGGACTAACTGAAGCAACA+GGG | - | chr3.3:57964789-57964808 | MS.gene049681:CDS | 40.0% |
| ! | CTTAGTGTCACAAAAGCACA+AGG | + | chr3.3:57965253-57965272 | None:intergenic | 40.0% |
| ! | CTTGTGCTTTTGTGACACTA+AGG | - | chr3.3:57965251-57965270 | MS.gene049681:intron | 40.0% |
| ! | GATGCATTTTGCAGTACCTA+TGG | - | chr3.3:57964031-57964050 | MS.gene049681:CDS | 40.0% |
| ! | TATGGACTAACTGAAGCAAC+AGG | - | chr3.3:57964788-57964807 | MS.gene049681:CDS | 40.0% |
| ! | TGGCTCGATTTTCTCAAGTA+GGG | + | chr3.3:57964744-57964763 | None:intergenic | 40.0% |
| ! | TGGTTTAGAACTGGTGATGT+TGG | - | chr3.3:57965058-57965077 | MS.gene049681:intron | 40.0% |
| !! | ACAGCAGCTTCTAAAACCTT+AGG | + | chr3.3:57965196-57965215 | None:intergenic | 40.0% |
| !! | AGTTTGCTCGACATTTTGGT+AGG | + | chr3.3:57963427-57963446 | None:intergenic | 40.0% |
| !!! | AGCATCGATTGCTCTCTTTT+CGG | + | chr3.3:57964857-57964876 | None:intergenic | 40.0% |
| AGGGAAGTGGAATCATGATG+GGG | - | chr3.3:57964990-57965009 | MS.gene049681:intron | 45.0% | |
| ATGAAGGAACCCGTTTCACT+TGG | - | chr3.3:57963519-57963538 | MS.gene049681:CDS | 45.0% | |
| CCGGTGAATATACTAACTGG+TGG | - | chr3.3:57964701-57964720 | MS.gene049681:CDS | 45.0% | |
| CTTCATGGATGACTGAGGTT+CGG | + | chr3.3:57963505-57963524 | None:intergenic | 45.0% | |
| CTTGAGAAAATCGAGCCACT+TGG | - | chr3.3:57964746-57964765 | MS.gene049681:CDS | 45.0% | |
| GAAGGGAAGTGGAATCATGA+TGG | - | chr3.3:57964988-57965007 | MS.gene049681:intron | 45.0% | |
| GACACTAAGGAAGAATGAGG+AGG | - | chr3.3:57965264-57965283 | MS.gene049681:intron | 45.0% | |
| GACGAGATAGAGCCATAATC+TGG | + | chr3.3:57965516-57965535 | None:intergenic | 45.0% | |
| GCAATGCCACATCCAAAATG+GGG | - | chr3.3:57965220-57965239 | MS.gene049681:intron | 45.0% | |
| TCGAAGAATGGTGGCTATGT+TGG | + | chr3.3:57964099-57964118 | None:intergenic | 45.0% | |
| ! | AAGTGAAACGGGTTCCTTCA+TGG | + | chr3.3:57963520-57963539 | None:intergenic | 45.0% |
| ! | ATGGAGAGTGTGGTAAGAGA+TGG | - | chr3.3:57964941-57964960 | MS.gene049681:CDS | 45.0% |
| ! | ATTTTCTCAAGTAGGGACGC+CGG | + | chr3.3:57964737-57964756 | None:intergenic | 45.0% |
| ! | CAAGGACTTTCACCCCATTT+TGG | + | chr3.3:57965235-57965254 | None:intergenic | 45.0% |
| ! | CATTTTGCAGTACCTATGGC+TGG | - | chr3.3:57964035-57964054 | MS.gene049681:CDS | 45.0% |
| ! | CTTTCACCCCATTTTGGATG+TGG | + | chr3.3:57965229-57965248 | None:intergenic | 45.0% |
| ! | GTGGCTCGATTTTCTCAAGT+AGG | + | chr3.3:57964745-57964764 | None:intergenic | 45.0% |
| ! | TGCAATATTGAGAGCACGGA+GGG | + | chr3.3:57963582-57963601 | None:intergenic | 45.0% |
| ! | TGGAGAGTGTGGTAAGAGAT+GGG | - | chr3.3:57964942-57964961 | MS.gene049681:CDS | 45.0% |
| ! | TTGCAATATTGAGAGCACGG+AGG | + | chr3.3:57963583-57963602 | None:intergenic | 45.0% |
| !! | GGTGTTGTTTATAGCCACAG+AGG | - | chr3.3:57964404-57964423 | MS.gene049681:CDS | 45.0% |
| CACCATTCTTCGACACTCTG+AGG | - | chr3.3:57964106-57964125 | MS.gene049681:CDS | 50.0% | |
| CACTACCCATTTCCCAACCA+AGG | + | chr3.3:57964457-57964476 | None:intergenic | 50.0% | |
| CATCAACCACCGTCTCAATG+CGG | - | chr3.3:57964073-57964092 | MS.gene049681:CDS | 50.0% | |
| CGAACCTCAGTCATCCATGA+AGG | - | chr3.3:57963503-57963522 | MS.gene049681:CDS | 50.0% | |
| CGAGCTCGAATACGAGCAAA+TGG | - | chr3.3:57964283-57964302 | MS.gene049681:intron | 50.0% | |
| CGATGCTTAAAGCGCGACAA+GGG | - | chr3.3:57964870-57964889 | MS.gene049681:CDS | 50.0% | |
| CTATGTTGGCCGCATTGAGA+CGG | + | chr3.3:57964085-57964104 | None:intergenic | 50.0% | |
| GATGCTTAAAGCGCGACAAG+GGG | - | chr3.3:57964871-57964890 | MS.gene049681:CDS | 50.0% | |
| GGTTCCTTCATGGATGACTG+AGG | + | chr3.3:57963510-57963529 | None:intergenic | 50.0% | |
| TAAACACTCCCACCGGAATC+CGG | - | chr3.3:57964255-57964274 | MS.gene049681:CDS | 50.0% | |
| TAGATCAGCGACCGCAATCT+AGG | - | chr3.3:57963794-57963813 | MS.gene049681:CDS | 50.0% | |
| TAGATTGCGGTCGCTGATCT+AGG | + | chr3.3:57963795-57963814 | None:intergenic | 50.0% | |
| TCGATGCTTAAAGCGCGACA+AGG | - | chr3.3:57964869-57964888 | MS.gene049681:CDS | 50.0% | |
| TGCCACTCACAAACAAGTGC+TGG | + | chr3.3:57964815-57964834 | None:intergenic | 50.0% | |
| ! | AATATTGAGAGCACGGAGGG+AGG | + | chr3.3:57963579-57963598 | None:intergenic | 50.0% |
| ! | TTTAGGACAGCACCAGCCAT+AGG | + | chr3.3:57964050-57964069 | None:intergenic | 50.0% |
| ! | TTTTCTCAAGTAGGGACGCC+GGG | + | chr3.3:57964736-57964755 | None:intergenic | 50.0% |
| !! | CTCAGAGTGTCGAAGAATGG+TGG | + | chr3.3:57964108-57964127 | None:intergenic | 50.0% |
| !! | GACGGTGGTTGATGGTGTTT+AGG | + | chr3.3:57964067-57964086 | None:intergenic | 50.0% |
| !! | GGGGATGGTTGGTTTAGAAC+TGG | - | chr3.3:57965049-57965068 | MS.gene049681:intron | 50.0% |
| AAGCGACGGCGAAAGCTTTC+GGG | - | chr3.3:57965029-57965048 | MS.gene049681:intron | 55.0% | |
| ACTTGGGGTGTAGCTGCAAG+AGG | - | chr3.3:57964530-57964549 | MS.gene049681:CDS | 55.0% | |
| CGAAAGCTTTCGGGGATGGT+TGG | - | chr3.3:57965038-57965057 | MS.gene049681:intron | 55.0% | |
| CGCATTGAGACGGTGGTTGA+TGG | + | chr3.3:57964075-57964094 | None:intergenic | 55.0% | |
| GAAGCGACGGCGAAAGCTTT+CGG | - | chr3.3:57965028-57965047 | MS.gene049681:intron | 55.0% | |
| GGCCAGCACTTGTTTGTGAG+TGG | - | chr3.3:57964810-57964829 | MS.gene049681:CDS | 55.0% | |
| TTTCTCAAGTAGGGACGCCG+GGG | + | chr3.3:57964735-57964754 | None:intergenic | 55.0% | |
| !! | CGCCTCAGAGTGTCGAAGAA+TGG | + | chr3.3:57964111-57964130 | None:intergenic | 55.0% |
| ACGGCGAAAGCTTTCGGGGA+TGG | - | chr3.3:57965034-57965053 | MS.gene049681:intron | 60.0% | |
| AGCGACGGCGAAAGCTTTCG+GGG | - | chr3.3:57965030-57965049 | MS.gene049681:intron | 60.0% | |
| CGTATTCGAGCTCGCCTAGC+CGG | + | chr3.3:57964277-57964296 | None:intergenic | 60.0% | |
| TGGGGTGTAGCTGCAAGAGG+AGG | - | chr3.3:57964533-57964552 | MS.gene049681:CDS | 60.0% | |
| TGTTGGCCGCATTGAGACGG+TGG | + | chr3.3:57964082-57964101 | None:intergenic | 60.0% | |
| TTCTCAAGTAGGGACGCCGG+GGG | + | chr3.3:57964734-57964753 | None:intergenic | 60.0% | |
| ACTCCCACCGGAATCCGGCT+AGG | - | chr3.3:57964260-57964279 | MS.gene049681:CDS | 65.0% | |
| GAGCTCGCCTAGCCGGATTC+CGG | + | chr3.3:57964270-57964289 | None:intergenic | 65.0% | |
| TCGCCTAGCCGGATTCCGGT+GGG | + | chr3.3:57964266-57964285 | None:intergenic | 65.0% | |
| ! | AACTGGTGGAGCACCACCCC+CGG | - | chr3.3:57964715-57964734 | MS.gene049681:CDS | 65.0% |
| AGGAAGCGAGGCGGCGACAC+CGG | + | chr3.3:57963559-57963578 | None:intergenic | 70.0% | |
| CACGGAGGGAGGAAGCGAGG+CGG | + | chr3.3:57963568-57963587 | None:intergenic | 70.0% | |
| CTCGCCTAGCCGGATTCCGG+TGG | + | chr3.3:57964267-57964286 | None:intergenic | 70.0% | |
| GAGCACGGAGGGAGGAAGCG+AGG | + | chr3.3:57963571-57963590 | None:intergenic | 70.0% | |
| TCAAGTAGGGACGCCGGGGG+TGG | + | chr3.3:57964731-57964750 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 57963416 | 57965540 | 57963416 | ID=MS.gene049681 |
| chr3.3 | mRNA | 57963416 | 57965540 | 57963416 | ID=MS.gene049681.t1;Parent=MS.gene049681 |
| chr3.3 | exon | 57965343 | 57965540 | 57965343 | ID=MS.gene049681.t1.exon1;Parent=MS.gene049681.t1 |
| chr3.3 | CDS | 57965343 | 57965540 | 57965343 | ID=cds.MS.gene049681.t1;Parent=MS.gene049681.t1 |
| chr3.3 | exon | 57964402 | 57964963 | 57964402 | ID=MS.gene049681.t1.exon2;Parent=MS.gene049681.t1 |
| chr3.3 | CDS | 57964402 | 57964963 | 57964402 | ID=cds.MS.gene049681.t1;Parent=MS.gene049681.t1 |
| chr3.3 | exon | 57963416 | 57964290 | 57963416 | ID=MS.gene049681.t1.exon3;Parent=MS.gene049681.t1 |
| chr3.3 | CDS | 57963416 | 57964290 | 57963416 | ID=cds.MS.gene049681.t1;Parent=MS.gene049681.t1 |
| Gene Sequence |
| Protein sequence |
