Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25079.t1 | XP_003627372.1 | 89.7 | 310 | 28 | 2 | 1 | 309 | 1 | 307 | 3.30E-144 | 521.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25079.t1 | Q9LJG8 | 36.6 | 399 | 139 | 9 | 1 | 306 | 1 | 378 | 9.6e-44 | 179.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25079.t1 | G7L8C7 | 89.7 | 310 | 28 | 2 | 1 | 309 | 1 | 307 | 2.4e-144 | 521.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene25079.t1 | TF | Trihelix |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049368 | MS.gene25079 | 0.805011 | 1.64E-49 | -1.69E-46 |
| MS.gene049419 | MS.gene25079 | -0.820243 | 7.60E-53 | -1.69E-46 |
| MS.gene050085 | MS.gene25079 | 0.807749 | 4.34E-50 | -1.69E-46 |
| MS.gene050361 | MS.gene25079 | 0.822526 | 2.26E-53 | -1.69E-46 |
| MS.gene050386 | MS.gene25079 | 0.806554 | 7.78E-50 | -1.69E-46 |
| MS.gene050646 | MS.gene25079 | 0.816822 | 4.54E-52 | -1.69E-46 |
| MS.gene050654 | MS.gene25079 | 0.845285 | 4.47E-59 | -1.69E-46 |
| MS.gene051003 | MS.gene25079 | 0.822689 | 2.07E-53 | -1.69E-46 |
| MS.gene051066 | MS.gene25079 | 0.838364 | 3.01E-57 | -1.69E-46 |
| MS.gene051343 | MS.gene25079 | 0.805777 | 1.13E-49 | -1.69E-46 |
| MS.gene051363 | MS.gene25079 | 0.811345 | 7.34E-51 | -1.69E-46 |
| MS.gene051856 | MS.gene25079 | 0.800154 | 1.65E-48 | -1.69E-46 |
| MS.gene051975 | MS.gene25079 | 0.804478 | 2.12E-49 | -1.69E-46 |
| MS.gene052072 | MS.gene25079 | 0.825782 | 3.89E-54 | -1.69E-46 |
| MS.gene052342 | MS.gene25079 | 0.819882 | 9.20E-53 | -1.69E-46 |
| MS.gene052434 | MS.gene25079 | 0.815606 | 8.48E-52 | -1.69E-46 |
| MS.gene053058 | MS.gene25079 | 0.821673 | 3.56E-53 | -1.69E-46 |
| MS.gene05517 | MS.gene25079 | 0.812292 | 4.56E-51 | -1.69E-46 |
| MS.gene055311 | MS.gene25079 | 0.823197 | 1.58E-53 | -1.69E-46 |
| MS.gene055314 | MS.gene25079 | 0.809382 | 1.94E-50 | -1.69E-46 |
| MS.gene056045 | MS.gene25079 | 0.835446 | 1.67E-56 | -1.69E-46 |
| MS.gene056181 | MS.gene25079 | 0.827103 | 1.88E-54 | -1.69E-46 |
| MS.gene056509 | MS.gene25079 | 0.806036 | 1.00E-49 | -1.69E-46 |
| MS.gene056787 | MS.gene25079 | 0.810707 | 1.01E-50 | -1.69E-46 |
| MS.gene058081 | MS.gene25079 | 0.803278 | 3.76E-49 | -1.69E-46 |
| MS.gene05897 | MS.gene25079 | 0.819715 | 1.00E-52 | -1.69E-46 |
| MS.gene059146 | MS.gene25079 | 0.824454 | 8.00E-54 | -1.69E-46 |
| MS.gene06010 | MS.gene25079 | 0.803122 | 4.05E-49 | -1.69E-46 |
| MS.gene060296 | MS.gene25079 | 0.801437 | 9.01E-49 | -1.69E-46 |
| MS.gene060933 | MS.gene25079 | 0.80473 | 1.88E-49 | -1.69E-46 |
| MS.gene060935 | MS.gene25079 | 0.811187 | 7.94E-51 | -1.69E-46 |
| MS.gene060937 | MS.gene25079 | 0.811207 | 7.86E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25079.t1 | MTR_8g022290 | 95.468 | 331 | 11 | 2 | 1 | 330 | 1 | 328 | 0.0 | 645 |
| MS.gene25079.t1 | MTR_2g016140 | 59.804 | 102 | 37 | 2 | 66 | 166 | 19 | 117 | 1.30e-35 | 133 |
| MS.gene25079.t1 | MTR_2g016140 | 53.030 | 66 | 28 | 1 | 265 | 330 | 236 | 298 | 1.06e-14 | 74.7 |
| MS.gene25079.t1 | MTR_2g016140 | 59.804 | 102 | 37 | 2 | 66 | 166 | 19 | 117 | 1.67e-35 | 133 |
| MS.gene25079.t1 | MTR_2g016140 | 53.030 | 66 | 28 | 1 | 265 | 330 | 236 | 298 | 1.57e-14 | 74.3 |
| MS.gene25079.t1 | MTR_4g079960 | 57.391 | 115 | 35 | 4 | 65 | 171 | 26 | 134 | 1.11e-33 | 127 |
| MS.gene25079.t1 | MTR_4g079960 | 57.391 | 115 | 35 | 4 | 65 | 171 | 26 | 134 | 1.99e-33 | 127 |
| MS.gene25079.t1 | MTR_4g079960 | 57.391 | 115 | 35 | 4 | 65 | 171 | 26 | 134 | 2.40e-33 | 127 |
| MS.gene25079.t1 | MTR_2g102227 | 30.418 | 263 | 131 | 8 | 70 | 330 | 274 | 486 | 4.38e-22 | 98.2 |
| MS.gene25079.t1 | MTR_2g092960 | 38.261 | 115 | 63 | 3 | 61 | 171 | 37 | 147 | 3.36e-17 | 84.3 |
| MS.gene25079.t1 | MTR_3g014280 | 26.299 | 308 | 162 | 12 | 54 | 330 | 21 | 294 | 5.26e-17 | 81.6 |
| MS.gene25079.t1 | MTR_6g486270 | 36.000 | 100 | 59 | 2 | 70 | 169 | 130 | 224 | 2.37e-16 | 80.1 |
| MS.gene25079.t1 | MTR_1g037650 | 36.066 | 122 | 68 | 2 | 54 | 174 | 21 | 133 | 7.98e-15 | 72.8 |
| MS.gene25079.t1 | MTR_1g061600 | 34.375 | 96 | 57 | 2 | 70 | 165 | 133 | 222 | 1.09e-14 | 75.9 |
| MS.gene25079.t1 | MTR_4g117990 | 32.632 | 95 | 62 | 1 | 69 | 163 | 43 | 135 | 5.34e-13 | 70.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25079.t1 | AT3G14180 | 47.656 | 384 | 109 | 11 | 34 | 330 | 24 | 402 | 1.94e-90 | 280 |
| MS.gene25079.t1 | AT1G54060 | 41.444 | 374 | 146 | 13 | 1 | 330 | 1 | 345 | 2.97e-54 | 184 |
| MS.gene25079.t1 | AT5G05550 | 39.552 | 268 | 102 | 7 | 65 | 330 | 19 | 228 | 1.87e-43 | 152 |
| MS.gene25079.t1 | AT5G05550 | 39.552 | 268 | 102 | 7 | 65 | 330 | 19 | 228 | 2.67e-43 | 151 |
| MS.gene25079.t1 | AT5G05550 | 39.552 | 268 | 102 | 7 | 65 | 330 | 19 | 228 | 3.06e-43 | 151 |
| MS.gene25079.t1 | AT3G58630 | 37.143 | 280 | 146 | 8 | 66 | 329 | 22 | 287 | 4.03e-43 | 153 |
| MS.gene25079.t1 | AT3G58630 | 37.143 | 280 | 146 | 8 | 66 | 329 | 22 | 287 | 5.36e-43 | 153 |
| MS.gene25079.t1 | AT3G11100 | 41.852 | 270 | 98 | 7 | 65 | 330 | 17 | 231 | 7.27e-43 | 150 |
| MS.gene25079.t1 | AT3G10030 | 36.283 | 113 | 66 | 2 | 70 | 182 | 161 | 267 | 8.01e-18 | 85.5 |
| MS.gene25079.t1 | AT3G10030 | 36.283 | 113 | 66 | 2 | 70 | 182 | 161 | 267 | 9.73e-18 | 85.5 |
| MS.gene25079.t1 | AT3G24490 | 33.846 | 130 | 76 | 4 | 70 | 197 | 90 | 211 | 7.16e-17 | 81.3 |
| MS.gene25079.t1 | AT3G54390 | 40.404 | 99 | 50 | 2 | 66 | 164 | 34 | 123 | 2.27e-16 | 79.3 |
| MS.gene25079.t1 | AT3G54390 | 40.404 | 99 | 50 | 2 | 66 | 164 | 50 | 139 | 2.61e-16 | 79.3 |
| MS.gene25079.t1 | AT2G44730 | 32.632 | 95 | 62 | 1 | 69 | 163 | 63 | 155 | 5.50e-12 | 67.0 |
| MS.gene25079.t1 | AT3G24860 | 28.800 | 125 | 67 | 3 | 39 | 163 | 45 | 147 | 1.07e-11 | 65.9 |
Find 110 sgRNAs with CRISPR-Local
Find 179 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCAGGTACGGCTGCAGTTT+GGG | 0.185680 | 8.4:-72138367 | None:intergenic |
| ACTCAGGCAATTGTGAAATT+TGG | 0.238839 | 8.4:+72137004 | MS.gene25079:CDS |
| ATAGCTATGGGACTGAATTT+TGG | 0.267179 | 8.4:-72138286 | None:intergenic |
| GATGAAGTTTGCTAAGGATT+TGG | 0.272524 | 8.4:+72137090 | MS.gene25079:CDS |
| GATCGGTTAGATCAGTTAAT+TGG | 0.279898 | 8.4:+72136632 | MS.gene25079:CDS |
| GCCAAGATTAGTGGTGTTTC+CGG | 0.285327 | 8.4:+72136662 | MS.gene25079:CDS |
| AGGCAGGTACGGCTGCAGTT+TGG | 0.318815 | 8.4:-72138368 | None:intergenic |
| TTCGGTGACGGTTGCGGCAC+CGG | 0.338241 | 8.4:+72136268 | MS.gene25079:CDS |
| TCCATCTCCGGTGTCGTCTC+CGG | 0.352746 | 8.4:+72136229 | MS.gene25079:CDS |
| AAATTCGAAGGGGAGAGGTT+GGG | 0.373866 | 8.4:+72136961 | MS.gene25079:CDS |
| CCTGTTGGTATTCGCGCCTC+TGG | 0.397120 | 8.4:+72136740 | MS.gene25079:CDS |
| GTTTCACGTCCCAGCGGTGC+TGG | 0.399693 | 8.4:-72138455 | None:intergenic |
| GTGGAGGGAGGGAGGATTGT+TGG | 0.405449 | 8.4:+72136348 | MS.gene25079:CDS |
| CCATCTCCGGTGTCGTCTCC+GGG | 0.410853 | 8.4:+72136230 | MS.gene25079:CDS |
| AGCGTGGGGAGAGAGGTATT+TGG | 0.415050 | 8.4:+72136400 | MS.gene25079:CDS |
| AAAACAGCCGCAACAGCTGC+TGG | 0.415089 | 8.4:+72138392 | MS.gene25079:CDS |
| AATTCGAAGGGGAGAGGTTG+GGG | 0.424508 | 8.4:+72136962 | MS.gene25079:CDS |
| GGGAGCGATCGGTAGGATTT+CGG | 0.429065 | 8.4:+72136250 | MS.gene25079:CDS |
| ATCGGTGCTGGAGGTGGCTC+CGG | 0.432598 | 8.4:+72136578 | MS.gene25079:CDS |
| ACCGGAAACACCACTAATCT+TGG | 0.441082 | 8.4:-72136663 | None:intergenic |
| GGCGGTGTTGATTGAAGCGT+GGG | 0.449332 | 8.4:+72136385 | MS.gene25079:CDS |
| AATGCATAGCTGTTCGCCGC+CGG | 0.453869 | 8.4:-72136287 | None:intergenic |
| GAGGTTGGGGAAGTGCGGTG+AGG | 0.461820 | 8.4:+72136975 | MS.gene25079:CDS |
| GAGGTTGCAGAGATTGTGAA+TGG | 0.465126 | 8.4:+72136461 | MS.gene25079:CDS |
| AGGTTGGGGAAGTGCGGTGA+GGG | 0.465619 | 8.4:+72136976 | MS.gene25079:CDS |
| ATCATAAAACCGCCAAGTGC+TGG | 0.468333 | 8.4:-72136612 | None:intergenic |
| GTTTCCGGTACCAGTCATAC+TGG | 0.474144 | 8.4:+72136677 | MS.gene25079:CDS |
| TAGGATTTCGGTGACGGTTG+CGG | 0.476805 | 8.4:+72136262 | MS.gene25079:CDS |
| GTCGAAGTTGCAGCAGGTGG+TGG | 0.476922 | 8.4:+72137051 | MS.gene25079:CDS |
| CAAATTCGAAGGGGAGAGGT+TGG | 0.478124 | 8.4:+72136960 | MS.gene25079:CDS |
| CTGATATTCAGTGTAAGAAT+CGG | 0.482219 | 8.4:+72136513 | MS.gene25079:CDS |
| GGTCCAGCTGCCAAGATTAG+TGG | 0.484802 | 8.4:+72136653 | MS.gene25079:CDS |
| CCAGAGGCGCGAATACCAAC+AGG | 0.485804 | 8.4:-72136740 | None:intergenic |
| GGCGAGTGGTTCTCCATCTC+CGG | 0.489845 | 8.4:+72136217 | MS.gene25079:CDS |
| GGTTAAGAAGAAGTATAAAT+CGG | 0.490848 | 8.4:+72136544 | MS.gene25079:CDS |
| GGAATTTGAAGCAGAAGCAT+TGG | 0.493242 | 8.4:+72136435 | MS.gene25079:CDS |
| GCTCTCTTCCTCTCCGGTGG+TGG | 0.494319 | 8.4:-72136923 | None:intergenic |
| GTTGCAGCAGGTGGTGGAGA+TGG | 0.496264 | 8.4:+72137057 | MS.gene25079:CDS |
| GAGAAAGCTAAGATCGGTGC+TGG | 0.500736 | 8.4:+72136566 | MS.gene25079:CDS |
| CCACGTGTCGTATTCTGAAT+CGG | 0.509196 | 8.4:-72136317 | None:intergenic |
| GCTAAGATCGGTGCTGGAGG+TGG | 0.509682 | 8.4:+72136572 | MS.gene25079:CDS |
| ACTTTCGCTCTCTTCCTCTC+CGG | 0.511815 | 8.4:-72136929 | None:intergenic |
| TGGAAGCAACGGTGGAGGGA+GGG | 0.519025 | 8.4:+72136337 | MS.gene25079:CDS |
| GTGTCGTCTCCGGGAGCGAT+CGG | 0.520173 | 8.4:+72136239 | MS.gene25079:CDS |
| GGTATTTGGAATTGAGCAGA+GGG | 0.520971 | 8.4:+72136414 | MS.gene25079:CDS |
| GATCGGTAGGATTTCGGTGA+CGG | 0.523152 | 8.4:+72136256 | MS.gene25079:CDS |
| GGAGAACCACTCGCCGGAGA+TGG | 0.523745 | 8.4:-72136209 | None:intergenic |
| AGTGATGAATTCAAATTCGA+AGG | 0.523808 | 8.4:+72136949 | MS.gene25079:CDS |
| GAAGCAGAAGCATTGGAAAG+AGG | 0.525294 | 8.4:+72136442 | MS.gene25079:CDS |
| AATTCAAATTCGAAGGGGAG+AGG | 0.527517 | 8.4:+72136956 | MS.gene25079:CDS |
| CCCGGAGACGACACCGGAGA+TGG | 0.529470 | 8.4:-72136230 | None:intergenic |
| TCACAGCAGAAAGTTCCGTT+AGG | 0.530119 | 8.4:+72136713 | MS.gene25079:CDS |
| GCAGAGGATGAAGTTTGCTA+AGG | 0.530659 | 8.4:+72137084 | MS.gene25079:CDS |
| GTGATGAATTCAAATTCGAA+GGG | 0.535513 | 8.4:+72136950 | MS.gene25079:CDS |
| ACACCACTAATCTTGGCAGC+TGG | 0.541940 | 8.4:-72136656 | None:intergenic |
| GAAATCCTACCGATCGCTCC+CGG | 0.544759 | 8.4:-72136248 | None:intergenic |
| GGATGCTTGAGGCATAGCTA+TGG | 0.545553 | 8.4:-72138299 | None:intergenic |
| GTGGAAGCAACGGTGGAGGG+AGG | 0.547610 | 8.4:+72136336 | MS.gene25079:CDS |
| CACGTGGAAGCAACGGTGGA+GGG | 0.548507 | 8.4:+72136333 | MS.gene25079:CDS |
| GTGTAAGAATCGGATTGATA+CGG | 0.548630 | 8.4:+72136523 | MS.gene25079:CDS |
| ATGACTGTTTCCAGTATGAC+TGG | 0.550475 | 8.4:-72136687 | None:intergenic |
| TTCGCTCTCTTCCTCTCCGG+TGG | 0.556083 | 8.4:-72136926 | None:intergenic |
| GGAGACGTCGAAGTTGCAGC+AGG | 0.559673 | 8.4:+72137045 | MS.gene25079:CDS |
| TGCGGTGAGGGAATTGACTC+AGG | 0.559802 | 8.4:+72136988 | MS.gene25079:CDS |
| GCAGGTACGGCTGCAGTTTG+GGG | 0.560060 | 8.4:-72138366 | None:intergenic |
| TGATAGTCCAGCAGCTGTTG+CGG | 0.560612 | 8.4:-72138399 | None:intergenic |
| AATACGACACGTGGAAGCAA+CGG | 0.563694 | 8.4:+72136326 | MS.gene25079:CDS |
| GCAGAGATTGTGAATGGAAG+AGG | 0.564142 | 8.4:+72136467 | MS.gene25079:CDS |
| AGGTATTTGGAATTGAGCAG+AGG | 0.565655 | 8.4:+72136413 | MS.gene25079:CDS |
| TGGTGGAGATGGAGAAGCAG+AGG | 0.566345 | 8.4:+72137068 | MS.gene25079:CDS |
| TGATTGAAGCGTGGGGAGAG+AGG | 0.567107 | 8.4:+72136393 | MS.gene25079:CDS |
| GGGGAGAGGTTGGGGAAGTG+CGG | 0.570094 | 8.4:+72136970 | MS.gene25079:CDS |
| GTGTTACAACCAGCACTTGG+CGG | 0.570584 | 8.4:+72136603 | MS.gene25079:CDS |
| CGGCGGTGTTGATTGAAGCG+TGG | 0.570892 | 8.4:+72136384 | MS.gene25079:CDS |
| GACGTCGAAGTTGCAGCAGG+TGG | 0.576057 | 8.4:+72137048 | MS.gene25079:CDS |
| ACACGTGGAAGCAACGGTGG+AGG | 0.578608 | 8.4:+72136332 | MS.gene25079:CDS |
| GTTTCCAGTATGACTGGTAC+CGG | 0.580255 | 8.4:-72136681 | None:intergenic |
| ATCGCTCCCGGAGACGACAC+CGG | 0.585960 | 8.4:-72136236 | None:intergenic |
| GCTATTGCTTGGGATGCTTG+AGG | 0.588655 | 8.4:-72138310 | None:intergenic |
| AGTGCTGGTTGTAACACCGC+CGG | 0.591035 | 8.4:-72136597 | None:intergenic |
| GCGGTGTTACAACCAGCACT+TGG | 0.592137 | 8.4:+72136600 | MS.gene25079:CDS |
| TTGTTGGAGCGAAGCAGCGA+CGG | 0.593492 | 8.4:+72136364 | MS.gene25079:CDS |
| AAGCGACAGTTTACCACCAC+CGG | 0.595248 | 8.4:+72136910 | MS.gene25079:CDS |
| AAGCAACGGTGGAGGGAGGG+AGG | 0.596019 | 8.4:+72136340 | MS.gene25079:CDS |
| GATCCACTCGAATCCATCTC+CGG | 0.596077 | 8.4:+72136196 | MS.gene25079:CDS |
| GATGCTTGAGGCATAGCTAT+GGG | 0.599077 | 8.4:-72138298 | None:intergenic |
| CGTCTCCGGGAGCGATCGGT+AGG | 0.601980 | 8.4:+72136243 | MS.gene25079:CDS |
| GGTGCTGGAGGTGGCTCCGG+CGG | 0.604719 | 8.4:+72136581 | MS.gene25079:CDS |
| ATTCGCGCCTCTGGAGCTAG+AGG | 0.614912 | 8.4:+72136749 | MS.gene25079:CDS |
| TGGTGAAGCTTATGAACAAG+CGG | 0.615901 | 8.4:+72137024 | MS.gene25079:CDS |
| TCGAATCCATCTCCGGCGAG+TGG | 0.616080 | 8.4:+72136203 | MS.gene25079:CDS |
| AAATCGGAGAAAGCTAAGAT+CGG | 0.619321 | 8.4:+72136560 | MS.gene25079:CDS |
| GGTGACGGTTGCGGCACCGG+CGG | 0.620431 | 8.4:+72136271 | MS.gene25079:CDS |
| GTTCCGTTAGGAATTCCTGT+TGG | 0.621548 | 8.4:+72136725 | MS.gene25079:CDS |
| TTGGAGCGAAGCAGCGACGG+CGG | 0.631965 | 8.4:+72136367 | MS.gene25079:CDS |
| AAAGCTAAGATCGGTGCTGG+AGG | 0.634146 | 8.4:+72136569 | MS.gene25079:CDS |
| GGAGATGGAGAACCACTCGC+CGG | 0.634434 | 8.4:-72136215 | None:intergenic |
| GGTAAACTGTCGCTTGACAC+CGG | 0.634602 | 8.4:-72136902 | None:intergenic |
| ATTCGCGCCTCTAGCTCCAG+AGG | 0.645061 | 8.4:-72136756 | None:intergenic |
| CTGCCTGTTTCACGTCCCAG+CGG | 0.645719 | 8.4:-72138461 | None:intergenic |
| ACGACACGTGGAAGCAACGG+TGG | 0.649070 | 8.4:+72136329 | MS.gene25079:CDS |
| CCGATTCAGAATACGACACG+TGG | 0.663489 | 8.4:+72136317 | MS.gene25079:CDS |
| ATACCAACAGGAATTCCTAA+CGG | 0.670478 | 8.4:-72136728 | None:intergenic |
| TCGCCGGAGATGGATTCGAG+TGG | 0.676446 | 8.4:-72136199 | None:intergenic |
| ACAGTTTACCACCACCGGAG+AGG | 0.677094 | 8.4:+72136915 | MS.gene25079:CDS |
| TGATGAATTCAAATTCGAAG+GGG | 0.682099 | 8.4:+72136951 | MS.gene25079:CDS |
| TGACGACGACGAGATCCACT+CGG | 0.685256 | 8.4:+72136166 | MS.gene25079:CDS |
| GAATTCAGCTCAGAAACGCG+TGG | 0.694751 | 8.4:-72136845 | None:intergenic |
| GCGGTGTTGATTGAAGCGTG+GGG | 0.735042 | 8.4:+72136386 | MS.gene25079:CDS |
| AGTGGATCGAGTTAACCGAG+TGG | 0.771483 | 8.4:-72136181 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAAAAAAGAGA+TGG | - | chr8.4:72138064-72138083 | None:intergenic | 10.0% |
| !!! | TTTTTTTTAATTATTCTCTT+TGG | - | chr8.4:72137404-72137423 | None:intergenic | 10.0% |
| !! | ATATTAAGATAAATTATTCC+TGG | + | chr8.4:72137836-72137855 | MS.gene25079:intron | 15.0% |
| !! | TATTACATTTATGTACATTA+TGG | + | chr8.4:72137888-72137907 | MS.gene25079:intron | 15.0% |
| !! | AACTTGATTGTAGATATAAA+AGG | + | chr8.4:72137762-72137781 | MS.gene25079:intron | 20.0% |
| !! | GAAGGAAAAAAAAAGATAAA+GGG | + | chr8.4:72137798-72137817 | MS.gene25079:intron | 20.0% |
| !!! | AATTGTTATTATCAGTGTTA+AGG | + | chr8.4:72137503-72137522 | MS.gene25079:intron | 20.0% |
| !!! | AGAAAAAGTGTTAATGTTAA+TGG | + | chr8.4:72137175-72137194 | MS.gene25079:intron | 20.0% |
| ! | AATCCATCAAAATAGCATTT+AGG | - | chr8.4:72137697-72137716 | None:intergenic | 25.0% |
| ! | AATTGTTGTAGTTAACTTAG+AGG | + | chr8.4:72137368-72137387 | MS.gene25079:intron | 25.0% |
| ! | ATTGTTGTAGTTAACTTAGA+GGG | + | chr8.4:72137369-72137388 | MS.gene25079:intron | 25.0% |
| ! | CGAAGGAAAAAAAAAGATAA+AGG | + | chr8.4:72137797-72137816 | MS.gene25079:intron | 25.0% |
| ! | CTGATAATAACAATTCAGAA+TGG | - | chr8.4:72137498-72137517 | None:intergenic | 25.0% |
| ! | GTGTATGTGTTTAGTTATTA+TGG | + | chr8.4:72137328-72137347 | MS.gene25079:intron | 25.0% |
| !! | GGTTAAGAAGAAGTATAAAT+CGG | + | chr8.4:72136544-72136563 | MS.gene25079:CDS | 25.0% |
| !! | TTACACTGAATATCAGTTTT+CGG | - | chr8.4:72136509-72136528 | None:intergenic | 25.0% |
| !!! | TAACCTAAATGCTATTTTGA+TGG | + | chr8.4:72137691-72137710 | MS.gene25079:intron | 25.0% |
| AGGATCATATCTTTGTTGAT+AGG | + | chr8.4:72137523-72137542 | MS.gene25079:intron | 30.0% | |
| AGTGATGAATTCAAATTCGA+AGG | + | chr8.4:72136949-72136968 | MS.gene25079:CDS | 30.0% | |
| CTGATATTCAGTGTAAGAAT+CGG | + | chr8.4:72136513-72136532 | MS.gene25079:CDS | 30.0% | |
| GTGATGAATTCAAATTCGAA+GGG | + | chr8.4:72136950-72136969 | MS.gene25079:CDS | 30.0% | |
| TCGAATTTGACCATTCAAAA+AGG | - | chr8.4:72137734-72137753 | None:intergenic | 30.0% | |
| TGATGAATTCAAATTCGAAG+GGG | + | chr8.4:72136951-72136970 | MS.gene25079:CDS | 30.0% | |
| ! | GTACACTTTACCTTTTTGAA+TGG | + | chr8.4:72137721-72137740 | MS.gene25079:intron | 30.0% |
| ! | TGATGTTTAGGTTTAAGGTT+AGG | + | chr8.4:72137287-72137306 | MS.gene25079:intron | 30.0% |
| AAAGGATTGATTGAACACGA+AGG | + | chr8.4:72137780-72137799 | MS.gene25079:intron | 35.0% | |
| AAATCGGAGAAAGCTAAGAT+CGG | + | chr8.4:72136560-72136579 | MS.gene25079:CDS | 35.0% | |
| AAGTTCCAAAACGAGAAGAA+CGG | + | chr8.4:72138183-72138202 | MS.gene25079:intron | 35.0% | |
| ACTCAGGCAATTGTGAAATT+TGG | + | chr8.4:72137004-72137023 | MS.gene25079:CDS | 35.0% | |
| ATACCAACAGGAATTCCTAA+CGG | - | chr8.4:72136731-72136750 | None:intergenic | 35.0% | |
| CACTGTCACTGTTATTGTTA+TGG | - | chr8.4:72137261-72137280 | None:intergenic | 35.0% | |
| CGGTGACAGATAAAATTACA+AGG | + | chr8.4:72138133-72138152 | MS.gene25079:intron | 35.0% | |
| GAGATTTCACAGTTGAAACT+TGG | + | chr8.4:72137151-72137170 | MS.gene25079:intron | 35.0% | |
| GATCGGTTAGATCAGTTAAT+TGG | + | chr8.4:72136632-72136651 | MS.gene25079:CDS | 35.0% | |
| GTACTTATGTATCCTTACAG+AGG | + | chr8.4:72138014-72138033 | MS.gene25079:intron | 35.0% | |
| GTGTAAGAATCGGATTGATA+CGG | + | chr8.4:72136523-72136542 | MS.gene25079:CDS | 35.0% | |
| TTAAAACACAAAATTGCGCC+AGG | - | chr8.4:72137857-72137876 | None:intergenic | 35.0% | |
| TTATGTATCCTTACAGAGGA+GGG | + | chr8.4:72138018-72138037 | MS.gene25079:intron | 35.0% | |
| ! | AGTCATAGCTTAAGCCATTT+TGG | - | chr8.4:72138246-72138265 | None:intergenic | 35.0% |
| ! | ATAGCTATGGGACTGAATTT+TGG | - | chr8.4:72138289-72138308 | None:intergenic | 35.0% |
| ! | GCAGTTTTTCATGAAAACTC+AGG | + | chr8.4:72137126-72137145 | MS.gene25079:CDS | 35.0% |
| ! | GTGAGTGATGTTTAGGTTTA+AGG | + | chr8.4:72137282-72137301 | MS.gene25079:intron | 35.0% |
| !! | GATGAAGTTTGCTAAGGATT+TGG | + | chr8.4:72137090-72137109 | MS.gene25079:CDS | 35.0% |
| !! | TATGACTCTGAAATCTAGTG+CGG | + | chr8.4:72138259-72138278 | MS.gene25079:intron | 35.0% |
| !!! | TTCTTCTCGTTTTGGAACTT+GGG | - | chr8.4:72138183-72138202 | None:intergenic | 35.0% |
| AATTCAAATTCGAAGGGGAG+AGG | + | chr8.4:72136956-72136975 | MS.gene25079:CDS | 40.0% | |
| ACAGTGAGTGAGTGATGTTT+AGG | + | chr8.4:72137275-72137294 | MS.gene25079:intron | 40.0% | |
| ATGACTGTTTCCAGTATGAC+TGG | - | chr8.4:72136690-72136709 | None:intergenic | 40.0% | |
| CTTATGTATCCTTACAGAGG+AGG | + | chr8.4:72138017-72138036 | MS.gene25079:intron | 40.0% | |
| TACAATATCCCTCCTCTGTA+AGG | - | chr8.4:72138029-72138048 | None:intergenic | 40.0% | |
| TACCAAGAACCACTCCAAAA+TGG | + | chr8.4:72138229-72138248 | MS.gene25079:intron | 40.0% | |
| TCTCGCAAGACGATAAGAAA+CGG | + | chr8.4:72138113-72138132 | MS.gene25079:intron | 40.0% | |
| TGCAGAAGAATCATTCTCAG+CGG | + | chr8.4:72137939-72137958 | MS.gene25079:intron | 40.0% | |
| TGGTGAAGCTTATGAACAAG+CGG | + | chr8.4:72137024-72137043 | MS.gene25079:CDS | 40.0% | |
| TTATCGTCTTGCGAGAGTTT+CGG | - | chr8.4:72138109-72138128 | None:intergenic | 40.0% | |
| ! | AGGTATTTGGAATTGAGCAG+AGG | + | chr8.4:72136413-72136432 | MS.gene25079:CDS | 40.0% |
| ! | ATTACAAGGATGCCGCTTAT+AGG | + | chr8.4:72138147-72138166 | MS.gene25079:intron | 40.0% |
| ! | GCTATTGTTGTTGTTGTTGC+TGG | - | chr8.4:72137236-72137255 | None:intergenic | 40.0% |
| ! | GGAATTTGAAGCAGAAGCAT+TGG | + | chr8.4:72136435-72136454 | MS.gene25079:CDS | 40.0% |
| ! | GGTATTTGGAATTGAGCAGA+GGG | + | chr8.4:72136414-72136433 | MS.gene25079:CDS | 40.0% |
| !! | GAGTGGTTCTTGGTAGTTTT+TGG | - | chr8.4:72138224-72138243 | None:intergenic | 40.0% |
| !! | TAGCTTAAGCCATTTTGGAG+TGG | - | chr8.4:72138241-72138260 | None:intergenic | 40.0% |
| !! | TGAAAAAGAAGCGTTGTCAC+CGG | + | chr8.4:72136883-72136902 | MS.gene25079:CDS | 40.0% |
| !!! | GGGTGTTTTTTCCTTATCCT+CGG | - | chr8.4:72138349-72138368 | None:intergenic | 40.0% |
| !!! | GTTCTTCTCGTTTTGGAACT+TGG | - | chr8.4:72138184-72138203 | None:intergenic | 40.0% |
| !!! | GTTTTTGGTGGCTATTGCTT+GGG | - | chr8.4:72138323-72138342 | None:intergenic | 40.0% |
| !!! | GTTTTTTCCTTATCCTCGGT+CGG | - | chr8.4:72138345-72138364 | None:intergenic | 40.0% |
| AAATTCGAAGGGGAGAGGTT+GGG | + | chr8.4:72136961-72136980 | MS.gene25079:CDS | 45.0% | |
| AATACGACACGTGGAAGCAA+CGG | + | chr8.4:72136326-72136345 | MS.gene25079:CDS | 45.0% | |
| ACCGGAAACACCACTAATCT+TGG | - | chr8.4:72136666-72136685 | None:intergenic | 45.0% | |
| ATCATAAAACCGCCAAGTGC+TGG | - | chr8.4:72136615-72136634 | None:intergenic | 45.0% | |
| CAGAAGAATCATTCTCAGCG+GGG | + | chr8.4:72137941-72137960 | MS.gene25079:intron | 45.0% | |
| CCACGTGTCGTATTCTGAAT+CGG | - | chr8.4:72136320-72136339 | None:intergenic | 45.0% | |
| GAGGTTGCAGAGATTGTGAA+TGG | + | chr8.4:72136461-72136480 | MS.gene25079:CDS | 45.0% | |
| GATGCTTGAGGCATAGCTAT+GGG | - | chr8.4:72138301-72138320 | None:intergenic | 45.0% | |
| GCAGAAGAATCATTCTCAGC+GGG | + | chr8.4:72137940-72137959 | MS.gene25079:intron | 45.0% | |
| GCAGAGATTGTGAATGGAAG+AGG | + | chr8.4:72136467-72136486 | MS.gene25079:CDS | 45.0% | |
| GCCAAGATTAGTGGTGTTTC+CGG | + | chr8.4:72136662-72136681 | MS.gene25079:CDS | 45.0% | |
| GTTCCGTTAGGAATTCCTGT+TGG | + | chr8.4:72136725-72136744 | MS.gene25079:CDS | 45.0% | |
| GTTTCCAGTATGACTGGTAC+CGG | - | chr8.4:72136684-72136703 | None:intergenic | 45.0% | |
| TCACAGCAGAAAGTTCCGTT+AGG | + | chr8.4:72136713-72136732 | MS.gene25079:CDS | 45.0% | |
| TCTCAGCGGGGATTGAATTA+GGG | + | chr8.4:72137953-72137972 | MS.gene25079:intron | 45.0% | |
| TTCCAAAACGAGAAGAACGG+TGG | + | chr8.4:72138186-72138205 | MS.gene25079:intron | 45.0% | |
| TTCTCAGCGGGGATTGAATT+AGG | + | chr8.4:72137952-72137971 | MS.gene25079:intron | 45.0% | |
| ! | GCTATGGGACTGAATTTTGG+TGG | - | chr8.4:72138286-72138305 | None:intergenic | 45.0% |
| ! | GGCGATTTTACGCCTATAAG+CGG | - | chr8.4:72138162-72138181 | None:intergenic | 45.0% |
| ! | TTCCACCGTTCTTCTCGTTT+TGG | - | chr8.4:72138191-72138210 | None:intergenic | 45.0% |
| !! | GAAGCAGAAGCATTGGAAAG+AGG | + | chr8.4:72136442-72136461 | MS.gene25079:CDS | 45.0% |
| !! | GCACTTGGCGGTTTTATGAT+CGG | + | chr8.4:72136615-72136634 | MS.gene25079:CDS | 45.0% |
| !! | GCAGAGGATGAAGTTTGCTA+AGG | + | chr8.4:72137084-72137103 | MS.gene25079:CDS | 45.0% |
| !!! | AGCCATTTTGGAGTGGTTCT+TGG | - | chr8.4:72138234-72138253 | None:intergenic | 45.0% |
| !!! | GGTTTTTGGTGGCTATTGCT+TGG | - | chr8.4:72138324-72138343 | None:intergenic | 45.0% |
| !!! | TTTTTTTTTTTTTTTTGAAT+TGG | + | chr8.4:72138069-72138088 | MS.gene25079:intron | 5.0% |
| AAGCGACAGTTTACCACCAC+CGG | + | chr8.4:72136910-72136929 | MS.gene25079:CDS | 50.0% | |
| AATTCGAAGGGGAGAGGTTG+GGG | + | chr8.4:72136962-72136981 | MS.gene25079:CDS | 50.0% | |
| ACACCACTAATCTTGGCAGC+TGG | - | chr8.4:72136659-72136678 | None:intergenic | 50.0% | |
| ACAGAAAAACCAGCACCGCT+GGG | + | chr8.4:72138446-72138465 | MS.gene25079:CDS | 50.0% | |
| ACTTTCGCTCTCTTCCTCTC+CGG | - | chr8.4:72136932-72136951 | None:intergenic | 50.0% | |
| AGTGGATCGAGTTAACCGAG+TGG | - | chr8.4:72136184-72136203 | None:intergenic | 50.0% | |
| CAAATTCGAAGGGGAGAGGT+TGG | + | chr8.4:72136960-72136979 | MS.gene25079:CDS | 50.0% | |
| CCAAAAACCGACCGAGGATA+AGG | + | chr8.4:72138335-72138354 | MS.gene25079:CDS | 50.0% | |
| CCGATTCAGAATACGACACG+TGG | + | chr8.4:72136317-72136336 | MS.gene25079:CDS | 50.0% | |
| GAATTCAGCTCAGAAACGCG+TGG | - | chr8.4:72136848-72136867 | None:intergenic | 50.0% | |
| GAGAAAGCTAAGATCGGTGC+TGG | + | chr8.4:72136566-72136585 | MS.gene25079:CDS | 50.0% | |
| GATCCACTCGAATCCATCTC+CGG | + | chr8.4:72136196-72136215 | MS.gene25079:CDS | 50.0% | |
| GATCGGTAGGATTTCGGTGA+CGG | + | chr8.4:72136256-72136275 | MS.gene25079:CDS | 50.0% | |
| GCTATTGCTTGGGATGCTTG+AGG | - | chr8.4:72138313-72138332 | None:intergenic | 50.0% | |
| GGATGCTTGAGGCATAGCTA+TGG | - | chr8.4:72138302-72138321 | None:intergenic | 50.0% | |
| GTGTTACAACCAGCACTTGG+CGG | + | chr8.4:72136603-72136622 | MS.gene25079:CDS | 50.0% | |
| GTTTCCGGTACCAGTCATAC+TGG | + | chr8.4:72136677-72136696 | MS.gene25079:CDS | 50.0% | |
| TGATAGTCCAGCAGCTGTTG+CGG | - | chr8.4:72138402-72138421 | None:intergenic | 50.0% | |
| ! | GGTAAACTGTCGCTTGACAC+CGG | - | chr8.4:72136905-72136924 | None:intergenic | 50.0% |
| ! | TAGGATTTCGGTGACGGTTG+CGG | + | chr8.4:72136262-72136281 | MS.gene25079:CDS | 50.0% |
| !! | AAAGCTAAGATCGGTGCTGG+AGG | + | chr8.4:72136569-72136588 | MS.gene25079:CDS | 50.0% |
| !! | CCTTATCCTCGGTCGGTTTT+TGG | - | chr8.4:72138338-72138357 | None:intergenic | 50.0% |
| !! | TATCCTCGGTCGGTTTTTGG+TGG | - | chr8.4:72138335-72138354 | None:intergenic | 50.0% |
| AAAACAGCCGCAACAGCTGC+TGG | + | chr8.4:72138392-72138411 | MS.gene25079:CDS | 55.0% | |
| AATGCATAGCTGTTCGCCGC+CGG | - | chr8.4:72136290-72136309 | None:intergenic | 55.0% | |
| ACAGTTTACCACCACCGGAG+AGG | + | chr8.4:72136915-72136934 | MS.gene25079:CDS | 55.0% | |
| CACAGAAAAACCAGCACCGC+TGG | + | chr8.4:72138445-72138464 | MS.gene25079:CDS | 55.0% | |
| GAAATCCTACCGATCGCTCC+CGG | - | chr8.4:72136251-72136270 | None:intergenic | 55.0% | |
| GGGAGCGATCGGTAGGATTT+CGG | + | chr8.4:72136250-72136269 | MS.gene25079:CDS | 55.0% | |
| GGTCCAGCTGCCAAGATTAG+TGG | + | chr8.4:72136653-72136672 | MS.gene25079:CDS | 55.0% | |
| TAGCCACCAAAAACCGACCG+AGG | + | chr8.4:72138329-72138348 | MS.gene25079:CDS | 55.0% | |
| TGACGACGACGAGATCCACT+CGG | + | chr8.4:72136166-72136185 | MS.gene25079:CDS | 55.0% | |
| TGATTGAAGCGTGGGGAGAG+AGG | + | chr8.4:72136393-72136412 | MS.gene25079:CDS | 55.0% | |
| TGGTGGAGATGGAGAAGCAG+AGG | + | chr8.4:72137068-72137087 | MS.gene25079:CDS | 55.0% | |
| TTGTTGGAGCGAAGCAGCGA+CGG | + | chr8.4:72136364-72136383 | MS.gene25079:CDS | 55.0% | |
| ! | TGCGGTGAGGGAATTGACTC+AGG | + | chr8.4:72136988-72137007 | MS.gene25079:CDS | 55.0% |
| !! | AGCGTGGGGAGAGAGGTATT+TGG | + | chr8.4:72136400-72136419 | MS.gene25079:CDS | 55.0% |
| !! | AGTGCTGGTTGTAACACCGC+CGG | - | chr8.4:72136600-72136619 | None:intergenic | 55.0% |
| !! | CAGCTGTTGCGGCTGTTTTC+AGG | - | chr8.4:72138391-72138410 | None:intergenic | 55.0% |
| !! | CGGCTGTTTTCAGGCAGGTA+CGG | - | chr8.4:72138382-72138401 | None:intergenic | 55.0% |
| !! | GCGGTGTTACAACCAGCACT+TGG | + | chr8.4:72136600-72136619 | MS.gene25079:CDS | 55.0% |
| !! | GCGGTGTTGATTGAAGCGTG+GGG | + | chr8.4:72136386-72136405 | MS.gene25079:CDS | 55.0% |
| !! | GGCGGTGTTGATTGAAGCGT+GGG | + | chr8.4:72136385-72136404 | MS.gene25079:CDS | 55.0% |
| !! | TGTTGCGGCTGTTTTCAGGC+AGG | - | chr8.4:72138387-72138406 | None:intergenic | 55.0% |
| !!! | CAGCGGTGCTGGTTTTTCTG+TGG | - | chr8.4:72138447-72138466 | None:intergenic | 55.0% |
| ACACGTGGAAGCAACGGTGG+AGG | + | chr8.4:72136332-72136351 | MS.gene25079:CDS | 60.0% | |
| ACGACACGTGGAAGCAACGG+TGG | + | chr8.4:72136329-72136348 | MS.gene25079:CDS | 60.0% | |
| AGGCAGGTACGGCTGCAGTT+TGG | - | chr8.4:72138371-72138390 | None:intergenic | 60.0% | |
| CACGTGGAAGCAACGGTGGA+GGG | + | chr8.4:72136333-72136352 | MS.gene25079:CDS | 60.0% | |
| CCTGTTGGTATTCGCGCCTC+TGG | + | chr8.4:72136740-72136759 | MS.gene25079:CDS | 60.0% | |
| GACGTCGAAGTTGCAGCAGG+TGG | + | chr8.4:72137048-72137067 | MS.gene25079:CDS | 60.0% | |
| GCAGGTACGGCTGCAGTTTG+GGG | - | chr8.4:72138369-72138388 | None:intergenic | 60.0% | |
| GGAGACGTCGAAGTTGCAGC+AGG | + | chr8.4:72137045-72137064 | MS.gene25079:CDS | 60.0% | |
| GGAGATGGAGAACCACTCGC+CGG | - | chr8.4:72136218-72136237 | None:intergenic | 60.0% | |
| GGCAGGTACGGCTGCAGTTT+GGG | - | chr8.4:72138370-72138389 | None:intergenic | 60.0% | |
| GGCGAGTGGTTCTCCATCTC+CGG | + | chr8.4:72136217-72136236 | MS.gene25079:CDS | 60.0% | |
| GTCGAAGTTGCAGCAGGTGG+TGG | + | chr8.4:72137051-72137070 | MS.gene25079:CDS | 60.0% | |
| GTGGAGGGAGGGAGGATTGT+TGG | + | chr8.4:72136348-72136367 | MS.gene25079:CDS | 60.0% | |
| TCGAATCCATCTCCGGCGAG+TGG | + | chr8.4:72136203-72136222 | MS.gene25079:CDS | 60.0% | |
| TGGAAGCAACGGTGGAGGGA+GGG | + | chr8.4:72136337-72136356 | MS.gene25079:CDS | 60.0% | |
| TTCGCTCTCTTCCTCTCCGG+TGG | - | chr8.4:72136929-72136948 | None:intergenic | 60.0% | |
| ! | AGGTTGGGGAAGTGCGGTGA+GGG | + | chr8.4:72136976-72136995 | MS.gene25079:CDS | 60.0% |
| ! | ATTCGCGCCTCTAGCTCCAG+AGG | - | chr8.4:72136759-72136778 | None:intergenic | 60.0% |
| ! | CCAGAGGCGCGAATACCAAC+AGG | - | chr8.4:72136743-72136762 | None:intergenic | 60.0% |
| ! | TCGCCGGAGATGGATTCGAG+TGG | - | chr8.4:72136202-72136221 | None:intergenic | 60.0% |
| !! | ATTCGCGCCTCTGGAGCTAG+AGG | + | chr8.4:72136749-72136768 | MS.gene25079:CDS | 60.0% |
| !! | CGGCGGTGTTGATTGAAGCG+TGG | + | chr8.4:72136384-72136403 | MS.gene25079:CDS | 60.0% |
| !! | GCTAAGATCGGTGCTGGAGG+TGG | + | chr8.4:72136572-72136591 | MS.gene25079:CDS | 60.0% |
| !! | GTTGCAGCAGGTGGTGGAGA+TGG | + | chr8.4:72137057-72137076 | MS.gene25079:CDS | 60.0% |
| !! | TCCATCTCCGGTGTCGTCTC+CGG | + | chr8.4:72136229-72136248 | MS.gene25079:CDS | 60.0% |
| AAGCAACGGTGGAGGGAGGG+AGG | + | chr8.4:72136340-72136359 | MS.gene25079:CDS | 65.0% | |
| ATCGCTCCCGGAGACGACAC+CGG | - | chr8.4:72136239-72136258 | None:intergenic | 65.0% | |
| GCTCTCTTCCTCTCCGGTGG+TGG | - | chr8.4:72136926-72136945 | None:intergenic | 65.0% | |
| GGAGAACCACTCGCCGGAGA+TGG | - | chr8.4:72136212-72136231 | None:intergenic | 65.0% | |
| GGGGAGAGGTTGGGGAAGTG+CGG | + | chr8.4:72136970-72136989 | MS.gene25079:CDS | 65.0% | |
| GTGGAAGCAACGGTGGAGGG+AGG | + | chr8.4:72136336-72136355 | MS.gene25079:CDS | 65.0% | |
| GTGTCGTCTCCGGGAGCGAT+CGG | + | chr8.4:72136239-72136258 | MS.gene25079:CDS | 65.0% | |
| TTGGAGCGAAGCAGCGACGG+CGG | + | chr8.4:72136367-72136386 | MS.gene25079:CDS | 65.0% | |
| ! | GAGGTTGGGGAAGTGCGGTG+AGG | + | chr8.4:72136975-72136994 | MS.gene25079:CDS | 65.0% |
| ! | TTCGGTGACGGTTGCGGCAC+CGG | + | chr8.4:72136268-72136287 | MS.gene25079:CDS | 65.0% |
| !! | ATCGGTGCTGGAGGTGGCTC+CGG | + | chr8.4:72136578-72136597 | MS.gene25079:CDS | 65.0% |
| !! | CCATCTCCGGTGTCGTCTCC+GGG | + | chr8.4:72136230-72136249 | MS.gene25079:CDS | 65.0% |
| CCCGGAGACGACACCGGAGA+TGG | - | chr8.4:72136233-72136252 | None:intergenic | 70.0% | |
| CGTCTCCGGGAGCGATCGGT+AGG | + | chr8.4:72136243-72136262 | MS.gene25079:CDS | 70.0% | |
| ! | GGTGACGGTTGCGGCACCGG+CGG | + | chr8.4:72136271-72136290 | MS.gene25079:CDS | 75.0% |
| ! | GGTGCTGGAGGTGGCTCCGG+CGG | + | chr8.4:72136581-72136600 | MS.gene25079:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 72136161 | 72138474 | 72136161 | ID=MS.gene25079 |
| chr8.4 | mRNA | 72136161 | 72138474 | 72136161 | ID=MS.gene25079.t1;Parent=MS.gene25079 |
| chr8.4 | exon | 72136161 | 72137147 | 72136161 | ID=MS.gene25079.t1.exon1;Parent=MS.gene25079.t1 |
| chr8.4 | CDS | 72136161 | 72137147 | 72136161 | ID=cds.MS.gene25079.t1;Parent=MS.gene25079.t1 |
| chr8.4 | exon | 72138277 | 72138474 | 72138277 | ID=MS.gene25079.t1.exon2;Parent=MS.gene25079.t1 |
| chr8.4 | CDS | 72138277 | 72138474 | 72138277 | ID=cds.MS.gene25079.t1;Parent=MS.gene25079.t1 |
| Gene Sequence |
| Protein sequence |
