Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056509.t1 | XP_013446233.1 | 99.5 | 397 | 2 | 0 | 1 | 397 | 1 | 397 | 1.10E-163 | 586.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056509.t1 | Q501B2 | 56.1 | 312 | 125 | 6 | 38 | 346 | 42 | 344 | 2.5e-60 | 234.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056509.t1 | A0A072U370 | 99.5 | 397 | 2 | 0 | 1 | 397 | 1 | 397 | 7.9e-164 | 586.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene056509.t1 | TF | bZIP |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049283 | MS.gene056509 | 0.813021 | 3.16E-51 | -1.69E-46 |
| MS.gene050571 | MS.gene056509 | 0.803856 | 2.85E-49 | -1.69E-46 |
| MS.gene050654 | MS.gene056509 | 0.809608 | 1.74E-50 | -1.69E-46 |
| MS.gene051343 | MS.gene056509 | 0.815634 | 8.36E-52 | -1.69E-46 |
| MS.gene051975 | MS.gene056509 | 0.836152 | 1.11E-56 | -1.69E-46 |
| MS.gene052463 | MS.gene056509 | 0.811079 | 8.38E-51 | -1.69E-46 |
| MS.gene053226 | MS.gene056509 | 0.800415 | 1.46E-48 | -1.69E-46 |
| MS.gene055311 | MS.gene056509 | 0.804682 | 1.92E-49 | -1.69E-46 |
| MS.gene055313 | MS.gene056509 | 0.811154 | 8.07E-51 | -1.69E-46 |
| MS.gene055513 | MS.gene056509 | 0.809588 | 1.76E-50 | -1.69E-46 |
| MS.gene056045 | MS.gene056509 | 0.829161 | 6.01E-55 | -1.69E-46 |
| MS.gene056181 | MS.gene056509 | 0.813932 | 1.99E-51 | -1.69E-46 |
| MS.gene056509 | MS.gene057034 | 0.810108 | 1.36E-50 | -1.69E-46 |
| MS.gene056509 | MS.gene05781 | 0.807124 | 5.89E-50 | -1.69E-46 |
| MS.gene056509 | MS.gene060777 | 0.817239 | 3.66E-52 | -1.69E-46 |
| MS.gene056509 | MS.gene06133 | 0.800047 | 1.73E-48 | -1.69E-46 |
| MS.gene056509 | MS.gene062156 | 0.809584 | 1.76E-50 | -1.69E-46 |
| MS.gene056509 | MS.gene062321 | 0.801513 | 8.69E-49 | -1.69E-46 |
| MS.gene056509 | MS.gene06238 | 0.825539 | 4.44E-54 | -1.69E-46 |
| MS.gene056509 | MS.gene06322 | 0.815894 | 7.32E-52 | -1.69E-46 |
| MS.gene056509 | MS.gene065159 | 0.805089 | 1.58E-49 | -1.69E-46 |
| MS.gene056509 | MS.gene065460 | 0.81283 | 3.48E-51 | -1.69E-46 |
| MS.gene056509 | MS.gene066319 | 0.809852 | 1.54E-50 | -1.69E-46 |
| MS.gene056509 | MS.gene066321 | 0.818121 | 2.31E-52 | -1.69E-46 |
| MS.gene056509 | MS.gene066746 | 0.815335 | 9.75E-52 | -1.69E-46 |
| MS.gene056509 | MS.gene06857 | 0.814738 | 1.32E-51 | -1.69E-46 |
| MS.gene056509 | MS.gene07067 | 0.80028 | 1.55E-48 | -1.69E-46 |
| MS.gene056509 | MS.gene070713 | -0.801666 | 8.09E-49 | -1.69E-46 |
| MS.gene056509 | MS.gene072762 | 0.811754 | 5.98E-51 | -1.69E-46 |
| MS.gene056509 | MS.gene074381 | 0.839185 | 1.84E-57 | -1.69E-46 |
| MS.gene056509 | MS.gene074587 | 0.819265 | 1.27E-52 | -1.69E-46 |
| MS.gene056509 | MS.gene07510 | 0.814736 | 1.32E-51 | -1.69E-46 |
| MS.gene056509 | MS.gene08922 | 0.803093 | 4.11E-49 | -1.69E-46 |
| MS.gene056509 | MS.gene20554 | 0.80222 | 6.22E-49 | -1.69E-46 |
| MS.gene056509 | MS.gene20886 | 0.802254 | 6.12E-49 | -1.69E-46 |
| MS.gene056509 | MS.gene20985 | 0.821144 | 4.72E-53 | -1.69E-46 |
| MS.gene056509 | MS.gene21056 | 0.807575 | 4.73E-50 | -1.69E-46 |
| MS.gene056509 | MS.gene22875 | 0.804093 | 2.55E-49 | -1.69E-46 |
| MS.gene056509 | MS.gene23513 | 0.813734 | 2.20E-51 | -1.69E-46 |
| MS.gene056509 | MS.gene25079 | 0.806036 | 1.00E-49 | -1.69E-46 |
| MS.gene056509 | MS.gene25928 | 0.811421 | 7.06E-51 | -1.69E-46 |
| MS.gene056509 | MS.gene26396 | 0.804454 | 2.14E-49 | -1.69E-46 |
| MS.gene056509 | MS.gene27059 | 0.801061 | 1.08E-48 | -1.69E-46 |
| MS.gene056509 | MS.gene27134 | 0.807925 | 3.98E-50 | -1.69E-46 |
| MS.gene056509 | MS.gene30753 | 0.804382 | 2.22E-49 | -1.69E-46 |
| MS.gene056509 | MS.gene32654 | 0.800711 | 1.27E-48 | -1.69E-46 |
| MS.gene056509 | MS.gene33135 | 0.846552 | 2.02E-59 | -1.69E-46 |
| MS.gene056509 | MS.gene33466 | 0.844283 | 8.32E-59 | -1.69E-46 |
| MS.gene056509 | MS.gene34011 | 0.803767 | 2.98E-49 | -1.69E-46 |
| MS.gene056509 | MS.gene35530 | 0.802154 | 6.42E-49 | -1.69E-46 |
| MS.gene056509 | MS.gene36410 | 0.807081 | 6.02E-50 | -1.69E-46 |
| MS.gene056509 | MS.gene37236 | 0.803616 | 3.20E-49 | -1.69E-46 |
| MS.gene056509 | MS.gene39253 | 0.806978 | 6.33E-50 | -1.69E-46 |
| MS.gene056509 | MS.gene39529 | 0.816035 | 6.81E-52 | -1.69E-46 |
| MS.gene056509 | MS.gene40093 | 0.811469 | 6.89E-51 | -1.69E-46 |
| MS.gene056509 | MS.gene40748 | 0.808193 | 3.49E-50 | -1.69E-46 |
| MS.gene056509 | MS.gene40969 | 0.811634 | 6.35E-51 | -1.69E-46 |
| MS.gene056509 | MS.gene40991 | 0.812463 | 4.19E-51 | -1.69E-46 |
| MS.gene056509 | MS.gene41678 | 0.802094 | 6.60E-49 | -1.69E-46 |
| MS.gene056509 | MS.gene41681 | 0.809469 | 1.86E-50 | -1.69E-46 |
| MS.gene056509 | MS.gene45761 | 0.805639 | 1.21E-49 | -1.69E-46 |
| MS.gene056509 | MS.gene47581 | 0.818792 | 1.63E-52 | -1.69E-46 |
| MS.gene056509 | MS.gene47822 | 0.801241 | 9.88E-49 | -1.69E-46 |
| MS.gene056509 | MS.gene50037 | 0.825058 | 5.77E-54 | -1.69E-46 |
| MS.gene056509 | MS.gene51789 | 0.817472 | 3.24E-52 | -1.69E-46 |
| MS.gene056509 | MS.gene52406 | 0.811131 | 8.16E-51 | -1.69E-46 |
| MS.gene056509 | MS.gene53467 | 0.800849 | 1.19E-48 | -1.69E-46 |
| MS.gene056509 | MS.gene53612 | 0.808246 | 3.40E-50 | -1.69E-46 |
| MS.gene056509 | MS.gene54299 | 0.810212 | 1.29E-50 | -1.69E-46 |
| MS.gene056509 | MS.gene54377 | 0.803331 | 3.67E-49 | -1.69E-46 |
| MS.gene056509 | MS.gene54380 | 0.806899 | 6.57E-50 | -1.69E-46 |
| MS.gene056509 | MS.gene54904 | 0.803409 | 3.53E-49 | -1.69E-46 |
| MS.gene056509 | MS.gene55818 | 0.801518 | 8.67E-49 | -1.69E-46 |
| MS.gene056509 | MS.gene58134 | 0.811909 | 5.53E-51 | -1.69E-46 |
| MS.gene056509 | MS.gene58547 | 0.803344 | 3.65E-49 | -1.69E-46 |
| MS.gene056509 | MS.gene63395 | 0.802405 | 5.70E-49 | -1.69E-46 |
| MS.gene056509 | MS.gene63961 | 0.805906 | 1.06E-49 | -1.69E-46 |
| MS.gene056509 | MS.gene68264 | 0.811308 | 7.47E-51 | -1.69E-46 |
| MS.gene056509 | MS.gene68713 | 0.803088 | 4.12E-49 | -1.69E-46 |
| MS.gene056509 | MS.gene69821 | 0.800678 | 1.29E-48 | -1.69E-46 |
| MS.gene056509 | MS.gene70282 | 0.816865 | 4.44E-52 | -1.69E-46 |
| MS.gene056509 | MS.gene70283 | 0.801158 | 1.03E-48 | -1.69E-46 |
| MS.gene056509 | MS.gene70600 | 0.820518 | 6.57E-53 | -1.69E-46 |
| MS.gene056509 | MS.gene73870 | 0.8014 | 9.17E-49 | -1.69E-46 |
| MS.gene056509 | MS.gene74537 | 0.8249 | 6.28E-54 | -1.69E-46 |
| MS.gene056509 | MS.gene74932 | 0.811143 | 8.11E-51 | -1.69E-46 |
| MS.gene056509 | MS.gene75413 | 0.811139 | 8.13E-51 | -1.69E-46 |
| MS.gene056509 | MS.gene77497 | 0.820317 | 7.31E-53 | -1.69E-46 |
| MS.gene056509 | MS.gene79466 | 0.808418 | 3.13E-50 | -1.69E-46 |
| MS.gene056509 | MS.gene82828 | 0.81737 | 3.42E-52 | -1.69E-46 |
| MS.gene056509 | MS.gene83324 | 0.804143 | 2.49E-49 | -1.69E-46 |
| MS.gene056509 | MS.gene83473 | 0.815433 | 9.27E-52 | -1.69E-46 |
| MS.gene056509 | MS.gene85246 | 0.833218 | 6.05E-56 | -1.69E-46 |
| MS.gene056509 | MS.gene85936 | 0.806331 | 8.67E-50 | -1.69E-46 |
| MS.gene056509 | MS.gene86826 | 0.818435 | 1.96E-52 | -1.69E-46 |
| MS.gene056509 | MS.gene89985 | 0.82494 | 6.15E-54 | -1.69E-46 |
| MS.gene056509 | MS.gene90260 | 0.809706 | 1.66E-50 | -1.69E-46 |
| MS.gene056509 | MS.gene92390 | 0.802681 | 5.00E-49 | -1.69E-46 |
| MS.gene056509 | MS.gene93037 | 0.836376 | 9.70E-57 | -1.69E-46 |
| MS.gene056509 | MS.gene93204 | 0.816625 | 5.02E-52 | -1.69E-46 |
| MS.gene056509 | MS.gene95305 | 0.824349 | 8.47E-54 | -1.69E-46 |
| MS.gene056509 | MS.gene95700 | 0.953151 | 5.15E-111 | -1.69E-46 |
| MS.gene056509 | MS.gene96353 | 0.806482 | 8.05E-50 | -1.69E-46 |
| MS.gene056509 | MS.gene97030 | 0.832521 | 9.01E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056509.t1 | MTR_8g070820 | 99.496 | 397 | 2 | 0 | 1 | 397 | 1 | 397 | 0.0 | 812 |
| MS.gene056509.t1 | MTR_8g070820 | 92.947 | 397 | 2 | 1 | 1 | 397 | 1 | 371 | 0.0 | 744 |
| MS.gene056509.t1 | MTR_5g028850 | 73.750 | 400 | 92 | 5 | 1 | 397 | 1 | 390 | 0.0 | 580 |
| MS.gene056509.t1 | MTR_5g028850 | 72.000 | 400 | 97 | 5 | 1 | 397 | 1 | 388 | 0.0 | 555 |
| MS.gene056509.t1 | MTR_7g116890 | 36.554 | 383 | 199 | 14 | 1 | 374 | 1 | 348 | 4.26e-54 | 185 |
| MS.gene056509.t1 | MTR_8g077950 | 41.509 | 371 | 150 | 18 | 17 | 374 | 9 | 325 | 1.13e-49 | 171 |
| MS.gene056509.t1 | MTR_8g077950 | 41.509 | 371 | 152 | 18 | 17 | 374 | 9 | 327 | 1.73e-49 | 171 |
| MS.gene056509.t1 | MTR_8g028150 | 33.500 | 400 | 205 | 15 | 1 | 385 | 1 | 354 | 3.65e-40 | 148 |
| MS.gene056509.t1 | MTR_8g077950 | 48.951 | 143 | 53 | 5 | 242 | 374 | 135 | 267 | 4.25e-31 | 120 |
| MS.gene056509.t1 | MTR_8g077950 | 39.297 | 313 | 127 | 16 | 33 | 332 | 23 | 285 | 5.37e-31 | 120 |
| MS.gene056509.t1 | MTR_2g045700 | 39.241 | 79 | 48 | 0 | 296 | 374 | 175 | 253 | 2.33e-12 | 67.4 |
| MS.gene056509.t1 | MTR_1g022495 | 42.105 | 76 | 41 | 1 | 302 | 377 | 26 | 98 | 5.50e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056509.t1 | AT2G35530 | 64.962 | 391 | 119 | 8 | 1 | 383 | 1 | 381 | 1.81e-165 | 470 |
| MS.gene056509.t1 | AT1G32150 | 58.603 | 401 | 132 | 8 | 1 | 390 | 1 | 378 | 1.68e-141 | 408 |
| MS.gene056509.t1 | AT4G36730 | 38.378 | 370 | 131 | 15 | 19 | 377 | 9 | 292 | 2.54e-48 | 167 |
| MS.gene056509.t1 | AT4G36730 | 38.172 | 372 | 127 | 15 | 19 | 377 | 9 | 290 | 6.64e-48 | 166 |
| MS.gene056509.t1 | AT2G46270 | 34.366 | 355 | 160 | 13 | 36 | 374 | 29 | 326 | 9.65e-41 | 148 |
| MS.gene056509.t1 | AT2G46270 | 34.366 | 355 | 160 | 13 | 36 | 374 | 29 | 326 | 9.65e-41 | 148 |
| MS.gene056509.t1 | AT2G46270 | 60.563 | 71 | 28 | 0 | 304 | 374 | 233 | 303 | 1.85e-20 | 92.4 |
| MS.gene056509.t1 | AT2G46270 | 31.841 | 201 | 95 | 9 | 36 | 220 | 29 | 203 | 1.10e-13 | 72.4 |
| MS.gene056509.t1 | AT2G46270 | 60.563 | 71 | 28 | 0 | 304 | 374 | 233 | 303 | 1.85e-20 | 92.4 |
| MS.gene056509.t1 | AT2G46270 | 31.841 | 201 | 95 | 9 | 36 | 220 | 29 | 203 | 1.10e-13 | 72.4 |
| MS.gene056509.t1 | AT4G01120 | 52.632 | 76 | 34 | 1 | 299 | 374 | 243 | 316 | 7.72e-18 | 84.7 |
| MS.gene056509.t1 | AT1G75390 | 40.217 | 92 | 51 | 2 | 286 | 377 | 22 | 109 | 5.49e-11 | 61.6 |
| MS.gene056509.t1 | AT3G30530 | 46.377 | 69 | 37 | 0 | 309 | 377 | 81 | 149 | 9.77e-11 | 60.8 |
Find 145 sgRNAs with CRISPR-Local
Find 391 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAAATATAGGAATGGATTAT+TGG | 0.202244 | 8.3:-31980148 | MS.gene056509:CDS |
| ACCTGGACACCCCACATATA+TGG | 0.227171 | 8.3:+31984011 | None:intergenic |
| CAAAAGATCAAAAGGAAGTT+TGG | 0.253367 | 8.3:-31982198 | MS.gene056509:CDS |
| CCCCGAATGGGCTAACTATC+AGG | 0.257101 | 8.3:-31984173 | MS.gene056509:intron |
| AAATATAGGAATGGATTATT+GGG | 0.271774 | 8.3:-31980147 | MS.gene056509:CDS |
| CAGGGCTCTCAATTGAAATT+CGG | 0.286966 | 8.3:-31980441 | MS.gene056509:CDS |
| AAAGGCGGAAGCAGTCTAAT+AGG | 0.287126 | 8.3:-31979903 | MS.gene056509:CDS |
| ACCTGATAGTTAGCCCATTC+GGG | 0.308959 | 8.3:+31984172 | None:intergenic |
| CACCCACATGCTGATCATTC+TGG | 0.309794 | 8.3:+31979328 | None:intergenic |
| GGCATGGCATAAGGACTAAA+AGG | 0.316452 | 8.3:+31982440 | None:intergenic |
| GGTCCTCTCACAACAGTTCC+TGG | 0.329718 | 8.3:-31980185 | MS.gene056509:CDS |
| CCACATATATGGGTGGGCTT+GGG | 0.332740 | 8.3:+31984022 | None:intergenic |
| AACCTGATAGTTAGCCCATT+CGG | 0.339192 | 8.3:+31984171 | None:intergenic |
| TACCAAGGAACGAGGATCTT+GGG | 0.357041 | 8.3:-31979356 | MS.gene056509:CDS |
| GTCGTACCTATGTCCGTTGC+TGG | 0.362082 | 8.3:-31980206 | MS.gene056509:CDS |
| ACAGATGACCCGGCTCAAAA+TGG | 0.372671 | 8.3:-31980293 | MS.gene056509:intron |
| TATACCTCCACCTGGATTCA+TGG | 0.375445 | 8.3:-31984054 | MS.gene056509:CDS |
| GTACCTTCTACTGCAGTTGC+TGG | 0.379295 | 8.3:-31980083 | MS.gene056509:CDS |
| ACACCAGGGGCATCTGCTAA+TGG | 0.392485 | 8.3:-31982131 | MS.gene056509:CDS |
| CCCACATATATGGGTGGGCT+TGG | 0.392498 | 8.3:+31984021 | None:intergenic |
| GGCAGTTCAGTACCTCAAAA+TGG | 0.396437 | 8.3:-31980272 | MS.gene056509:CDS |
| AAAAGATCAAAAGGAAGTTT+GGG | 0.400644 | 8.3:-31982197 | MS.gene056509:CDS |
| TAGGTACGACAGACATAGTT+TGG | 0.407072 | 8.3:+31980219 | None:intergenic |
| GTAGCAGCTGGAGGCGTCTT+AGG | 0.407423 | 8.3:+31984328 | None:intergenic |
| GGTACCTTTCCGTGCATTGC+AGG | 0.416480 | 8.3:+31980101 | None:intergenic |
| CCATCAGCTTCACTGCTGCC+TGG | 0.418689 | 8.3:+31982254 | None:intergenic |
| CCCATATATGTGGGGTGTCC+AGG | 0.420693 | 8.3:-31984012 | MS.gene056509:intron |
| CACATATATGGGTGGGCTTG+GGG | 0.427418 | 8.3:+31984023 | None:intergenic |
| CCCACTACTAACTTAAATAT+AGG | 0.436455 | 8.3:-31980161 | MS.gene056509:CDS |
| CCTCCAGCAACTGCAGTAGA+AGG | 0.438361 | 8.3:+31980080 | None:intergenic |
| AGGGCTCTCAATTGAAATTC+GGG | 0.440159 | 8.3:-31980440 | MS.gene056509:CDS |
| AATCCAGGTGGAGGTATAGA+AGG | 0.445952 | 8.3:+31984059 | None:intergenic |
| CTTTCCGTGCATTGCAGGAA+TGG | 0.449485 | 8.3:+31980106 | None:intergenic |
| CCTGGACACCCCACATATAT+GGG | 0.449685 | 8.3:+31984012 | None:intergenic |
| ATACCAAGGAACGAGGATCT+TGG | 0.451531 | 8.3:-31979357 | MS.gene056509:CDS |
| TCCCCAAGATCCTCGTTCCT+TGG | 0.452226 | 8.3:+31979354 | None:intergenic |
| GAAGCATCCACCATACCATT+TGG | 0.458336 | 8.3:+31982413 | None:intergenic |
| AGGATGTGGTGGGGTGCCAT+AGG | 0.459399 | 8.3:+31982636 | None:intergenic |
| ATGGTGTTCATTCACAACTT+TGG | 0.464556 | 8.3:-31980034 | MS.gene056509:CDS |
| TGGGGATACATTGCGACATA+AGG | 0.466717 | 8.3:+31982616 | None:intergenic |
| TTACCAATCAAAAGATCAAA+AGG | 0.467549 | 8.3:-31982206 | MS.gene056509:CDS |
| CTCTCCGTGCTGAACTGAGC+CGG | 0.468290 | 8.3:-31979706 | MS.gene056509:CDS |
| AAGGCGGAAGCAGTCTAATA+GGG | 0.468971 | 8.3:-31979902 | MS.gene056509:CDS |
| TCTCGTATTCACTCTTGATC+CGG | 0.469532 | 8.3:+31979687 | None:intergenic |
| TGTCACAGAACTTACATTCT+GGG | 0.470894 | 8.3:+31981759 | None:intergenic |
| ATTGAAATTCGGGGAGAGGC+AGG | 0.472798 | 8.3:-31980430 | MS.gene056509:CDS |
| CCTATATTTAAGTTAGTAGT+GGG | 0.472827 | 8.3:+31980161 | None:intergenic |
| TCATTCACAACTTTGGCTAC+AGG | 0.473534 | 8.3:-31980027 | MS.gene056509:intron |
| TAGATCCAGGTTGCGAAAGC+AGG | 0.478690 | 8.3:-31979869 | MS.gene056509:intron |
| GCCCATTCGGGGTTAACTGC+CGG | 0.479117 | 8.3:+31984184 | None:intergenic |
| TATGCCATGCCTTCTCCAAA+TGG | 0.479292 | 8.3:-31982428 | MS.gene056509:CDS |
| TATTACCTGCTTTCGCAACC+TGG | 0.480316 | 8.3:+31979864 | None:intergenic |
| GAGCAGTCTTCAACGACAAC+CGG | 0.480478 | 8.3:-31984211 | MS.gene056509:CDS |
| TGGTTAACTATTAGGATGAA+AGG | 0.486053 | 8.3:-31979939 | MS.gene056509:intron |
| CTAATGGAATTCATTCCAAA+AGG | 0.489473 | 8.3:-31982115 | MS.gene056509:intron |
| TTTGGAGAAGGCATGGCATA+AGG | 0.491615 | 8.3:+31982431 | None:intergenic |
| CCCAAGCCCACCCATATATG+TGG | 0.492797 | 8.3:-31984022 | MS.gene056509:CDS |
| TGATAAAACCTTAAAAGAAA+AGG | 0.496377 | 8.3:-31984353 | MS.gene056509:CDS |
| TACTGCAGTTGCTGGAGGAA+TGG | 0.496681 | 8.3:-31980075 | MS.gene056509:CDS |
| GGGAATCTGCACGTAGATCC+AGG | 0.502140 | 8.3:-31979882 | MS.gene056509:CDS |
| GCCTCCAGCTGCTACGTCAC+AGG | 0.506976 | 8.3:-31984320 | MS.gene056509:intron |
| GGTTAACTATTAGGATGAAA+GGG | 0.512619 | 8.3:-31979938 | MS.gene056509:intron |
| GTTTGGTTAACAACTGTATG+AGG | 0.514834 | 8.3:+31980236 | None:intergenic |
| TGGTTCTACAGGAGAGACTC+GGG | 0.517448 | 8.3:-31979383 | MS.gene056509:intron |
| TGCTCATCCATCCATGCCTC+CGG | 0.518685 | 8.3:-31982581 | MS.gene056509:intron |
| GGATGTGGTGGGGTGCCATA+GGG | 0.518948 | 8.3:+31982637 | None:intergenic |
| GGGGTTAACTGCCGGAGTAC+CGG | 0.520435 | 8.3:+31984192 | None:intergenic |
| CTCAATTGAAATTCGGGGAG+AGG | 0.522210 | 8.3:-31980434 | MS.gene056509:CDS |
| CTCCGGCAGTTAACCCCGAA+TGG | 0.525253 | 8.3:-31984186 | MS.gene056509:CDS |
| GCTGGAGGAATGGTTAATGC+TGG | 0.526040 | 8.3:-31980065 | MS.gene056509:CDS |
| CAGCATATGATGCCTCCCTA+TGG | 0.528530 | 8.3:-31982652 | MS.gene056509:CDS |
| AAGTATACCGGAGGCATGGA+TGG | 0.528640 | 8.3:+31982574 | None:intergenic |
| TCCTATATTTAAGTTAGTAG+TGG | 0.530842 | 8.3:+31980160 | None:intergenic |
| AGATTTCAAAATCACCTTGA+GGG | 0.533419 | 8.3:+31979643 | None:intergenic |
| TTCAACGACAACCGGTACTC+CGG | 0.540490 | 8.3:-31984203 | MS.gene056509:CDS |
| GGACTTGATGCCATGAATCC+AGG | 0.540907 | 8.3:+31984044 | None:intergenic |
| AAGACCTGTGACGTAGCAGC+TGG | 0.543721 | 8.3:+31984316 | None:intergenic |
| GACATGCAGGGGAATACTCC+AGG | 0.547866 | 8.3:-31982272 | MS.gene056509:intron |
| TGTGGTGGGGTGCCATAGGG+AGG | 0.551298 | 8.3:+31982640 | None:intergenic |
| AGAGGACCAGCAACGGACAT+AGG | 0.552788 | 8.3:+31980200 | None:intergenic |
| GCAAGTGAAGGCACTAGTGA+AGG | 0.553916 | 8.3:-31981796 | MS.gene056509:CDS |
| CCAAGCCCACCCATATATGT+GGG | 0.556845 | 8.3:-31984021 | MS.gene056509:CDS |
| TCCGGCAGTTAACCCCGAAT+GGG | 0.560162 | 8.3:-31984185 | MS.gene056509:CDS |
| TTGCTGTATTACAGATGACC+CGG | 0.563684 | 8.3:-31980303 | MS.gene056509:intron |
| AATGATCAGCATGTGGGTGA+AGG | 0.569522 | 8.3:-31979324 | MS.gene056509:CDS |
| ACCAAGGAACGAGGATCTTG+GGG | 0.570685 | 8.3:-31979355 | MS.gene056509:CDS |
| TACTAACTTAAATATAGGAA+TGG | 0.572861 | 8.3:-31980156 | MS.gene056509:CDS |
| TCCACCATTCCTGCAATGCA+CGG | 0.574091 | 8.3:-31980110 | MS.gene056509:CDS |
| TGGTAAACCTCATGAGGTGA+AGG | 0.575725 | 8.3:-31982234 | MS.gene056509:CDS |
| TTCTGAGAATGCTTCCCTCA+AGG | 0.576301 | 8.3:-31979657 | MS.gene056509:intron |
| TCCGTGCATTGCAGGAATGG+TGG | 0.577552 | 8.3:+31980109 | None:intergenic |
| AGGAACGAGGATCTTGGGGA+GGG | 0.579743 | 8.3:-31979351 | MS.gene056509:CDS |
| AATATAGGAATGGATTATTG+GGG | 0.584542 | 8.3:-31980146 | MS.gene056509:CDS |
| GGACACCCCACATATATGGG+TGG | 0.589530 | 8.3:+31984015 | None:intergenic |
| TTGGTTCTACAGGAGAGACT+CGG | 0.589648 | 8.3:-31979384 | MS.gene056509:intron |
| AATGAGCTTGGTAAAACACC+AGG | 0.590812 | 8.3:-31982146 | MS.gene056509:CDS |
| CATGCCTTCTCCAAATGGTA+TGG | 0.591308 | 8.3:-31982423 | MS.gene056509:CDS |
| GCTCAGTTCAGCACGGAGAG+AGG | 0.592194 | 8.3:+31979709 | None:intergenic |
| ACGAAAGTATACCGGAGGCA+TGG | 0.593534 | 8.3:+31982570 | None:intergenic |
| ATTGCGACATAAGGATGTGG+TGG | 0.595851 | 8.3:+31982625 | None:intergenic |
| GCAGGAATGGTGGATGAAGT+TGG | 0.599117 | 8.3:+31980119 | None:intergenic |
| CTGGAGGAATGGTTAATGCT+GGG | 0.601036 | 8.3:-31980064 | MS.gene056509:CDS |
| GACACCCCACATATATGGGT+GGG | 0.603216 | 8.3:+31984016 | None:intergenic |
| TACATTGCGACATAAGGATG+TGG | 0.605542 | 8.3:+31982622 | None:intergenic |
| CCTTCTACTGCAGTTGCTGG+AGG | 0.607589 | 8.3:-31980080 | MS.gene056509:CDS |
| AAGTTTGGGTAGTTCAAACA+TGG | 0.608623 | 8.3:-31982183 | MS.gene056509:CDS |
| TTTAAGTTAGTAGTGGGACC+AGG | 0.608854 | 8.3:+31980167 | None:intergenic |
| GATGAGCATATATGCCACCA+TGG | 0.610974 | 8.3:+31982596 | None:intergenic |
| GGGCCAGAATGATCAGCATG+TGG | 0.612197 | 8.3:-31979331 | MS.gene056509:CDS |
| CATACCATTTGGAGAAGGCA+TGG | 0.613312 | 8.3:+31982424 | None:intergenic |
| ATTCCATTAGCAGATGCCCC+TGG | 0.621104 | 8.3:+31982128 | None:intergenic |
| CATTCCTGCAATGCACGGAA+AGG | 0.621782 | 8.3:-31980105 | MS.gene056509:CDS |
| TGTTGTGAGAGGACCAGCAA+CGG | 0.626942 | 8.3:+31980193 | None:intergenic |
| ATGAGCATATATGCCACCAT+GGG | 0.627162 | 8.3:+31982597 | None:intergenic |
| GCCTTCTCCAAATGGTATGG+TGG | 0.630900 | 8.3:-31982420 | MS.gene056509:CDS |
| CCAGGCAGCAGTGAAGCTGA+TGG | 0.631933 | 8.3:-31982254 | MS.gene056509:CDS |
| GTTAATGCTGGGCCACGAGA+TGG | 0.632506 | 8.3:-31980053 | MS.gene056509:CDS |
| TGAACTAGCTCAGCGTGCTG+AGG | 0.634295 | 8.3:-31979750 | MS.gene056509:CDS |
| GATGCCATGAATCCAGGTGG+AGG | 0.637571 | 8.3:+31984050 | None:intergenic |
| AGAGACTCGGGGAGATACCA+AGG | 0.637623 | 8.3:-31979371 | MS.gene056509:CDS |
| TATCCTTCTATACCTCCACC+TGG | 0.638956 | 8.3:-31984062 | MS.gene056509:CDS |
| ACCTGTGACGTAGCAGCTGG+AGG | 0.642344 | 8.3:+31984319 | None:intergenic |
| TTGCGACATAAGGATGTGGT+GGG | 0.644911 | 8.3:+31982626 | None:intergenic |
| TCCACCATACCATTTGGAGA+AGG | 0.648739 | 8.3:+31982419 | None:intergenic |
| GGCCAGAATGATCAGCATGT+GGG | 0.651767 | 8.3:-31979330 | MS.gene056509:CDS |
| TATGTCGCAATGTATCCCCA+TGG | 0.658011 | 8.3:-31982613 | MS.gene056509:CDS |
| AAAGGGAGCTTAAACGACAA+AGG | 0.658178 | 8.3:-31979921 | MS.gene056509:CDS |
| GGACCAGGAACTGTTGTGAG+AGG | 0.660532 | 8.3:+31980182 | None:intergenic |
| CCTGATAGTTAGCCCATTCG+GGG | 0.666618 | 8.3:+31984173 | None:intergenic |
| AAGGAACGAGGATCTTGGGG+AGG | 0.668920 | 8.3:-31979352 | MS.gene056509:CDS |
| CGGGGAGATACCAAGGAACG+AGG | 0.670652 | 8.3:-31979364 | MS.gene056509:CDS |
| ATGAGCTTGGTAAAACACCA+GGG | 0.672813 | 8.3:-31982145 | MS.gene056509:CDS |
| GGGCTCTCAATTGAAATTCG+GGG | 0.673030 | 8.3:-31980439 | MS.gene056509:CDS |
| AGCTGATGGTAAACCTCATG+AGG | 0.683457 | 8.3:-31982240 | MS.gene056509:CDS |
| TGTGAATGAACACCATCTCG+TGG | 0.684340 | 8.3:+31980041 | None:intergenic |
| CAAGCCCACCCATATATGTG+GGG | 0.685064 | 8.3:-31984020 | MS.gene056509:CDS |
| GTCGCAATGTATCCCCATGG+TGG | 0.685770 | 8.3:-31982610 | MS.gene056509:CDS |
| TGATCCGGCTCAGTTCAGCA+CGG | 0.693436 | 8.3:+31979702 | None:intergenic |
| CTTGATGCCATGAATCCAGG+TGG | 0.705384 | 8.3:+31984047 | None:intergenic |
| GGGAGCTTAAACGACAAAGG+CGG | 0.710557 | 8.3:-31979918 | MS.gene056509:CDS |
| AGTGGTGAGAGTGCAAGTGA+AGG | 0.711216 | 8.3:-31981808 | MS.gene056509:CDS |
| GGTTCTACAGGAGAGACTCG+GGG | 0.726395 | 8.3:-31979382 | MS.gene056509:intron |
| TGAGCTTGGTAAAACACCAG+GGG | 0.727883 | 8.3:-31982144 | MS.gene056509:CDS |
| TGAGCATATATGCCACCATG+GGG | 0.728314 | 8.3:+31982598 | None:intergenic |
| TGCGACATAAGGATGTGGTG+GGG | 0.734427 | 8.3:+31982627 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTAATATTATTATATA+TGG | - | chr8.3:31980788-31980807 | MS.gene056509:intron | 0.0% |
| !! | TAAAAAAAAAAACTTACTTA+AGG | - | chr8.3:31982753-31982772 | MS.gene056509:intron | 10.0% |
| !!! | AAGTAAGTTTTTTTTTTTAA+TGG | + | chr8.3:31982752-31982771 | None:intergenic | 10.0% |
| !!! | AGGAAAAAATAATTAATTTT+AGG | + | chr8.3:31983169-31983188 | None:intergenic | 10.0% |
| !!! | ATCTTAAATTTTTAATTGAA+AGG | - | chr8.3:31980381-31980400 | MS.gene056509:intron | 10.0% |
| !!! | GTATTTTTTTATTAATGATT+TGG | + | chr8.3:31980128-31980147 | None:intergenic | 10.0% |
| !!! | TCTTAAATTTTTAATTGAAA+GGG | - | chr8.3:31980382-31980401 | MS.gene056509:intron | 10.0% |
| !!! | TGATATATCTTATTTTTAAT+GGG | - | chr8.3:31980821-31980840 | MS.gene056509:intron | 10.0% |
| !!! | TTATATTTGATAGTTATAAT+AGG | + | chr8.3:31979812-31979831 | None:intergenic | 10.0% |
| !!! | TTGATATATCTTATTTTTAA+TGG | - | chr8.3:31980820-31980839 | MS.gene056509:intron | 10.0% |
| !! | AAGAAAATATAGTTTAACTA+TGG | + | chr8.3:31980579-31980598 | None:intergenic | 15.0% |
| !! | ACATTTCTATGAATTTATTT+AGG | - | chr8.3:31981213-31981232 | MS.gene056509:intron | 15.0% |
| !! | AGAAAATATAGTTTAACTAT+GGG | + | chr8.3:31980578-31980597 | None:intergenic | 15.0% |
| !! | ATCTGAAAATATTAATACAA+AGG | - | chr8.3:31984248-31984267 | MS.gene056509:intron | 15.0% |
| !! | CAAAAAAAAATTAACATGTT+AGG | + | chr8.3:31982144-31982163 | None:intergenic | 15.0% |
| !! | CATTATAATTAAAATCATCT+GGG | - | chr8.3:31982990-31983009 | MS.gene056509:intron | 15.0% |
| !! | CATTTCTATGAATTTATTTA+GGG | - | chr8.3:31981214-31981233 | MS.gene056509:intron | 15.0% |
| !! | GTTAGAAGTAATAAAAATAA+AGG | + | chr8.3:31980676-31980695 | None:intergenic | 15.0% |
| !! | TATCAAATATAAAACCTAAT+GGG | - | chr8.3:31979820-31979839 | MS.gene056509:intron | 15.0% |
| !! | TATCATTGTTAAATTGAAAT+TGG | - | chr8.3:31979917-31979936 | MS.gene056509:CDS | 15.0% |
| !! | TCATTATAATTAAAATCATC+TGG | - | chr8.3:31982989-31983008 | MS.gene056509:intron | 15.0% |
| !!! | ATCAGATATTTTTTTAGTAT+TGG | + | chr8.3:31980969-31980988 | None:intergenic | 15.0% |
| !!! | ATTAATGATTTGGAAAATTA+TGG | + | chr8.3:31980118-31980137 | None:intergenic | 15.0% |
| !!! | TTTGAAATTAATGTTTTTGT+TGG | - | chr8.3:31983890-31983909 | MS.gene056509:intron | 15.0% |
| !!! | TTTTGTTTGAAAGATAAATT+AGG | + | chr8.3:31982356-31982375 | None:intergenic | 15.0% |
| !! | AAAAAAAAGTGAAAAAGAAG+AGG | + | chr8.3:31980541-31980560 | None:intergenic | 20.0% |
| !! | AAAATACACATCAACATAAA+AGG | + | chr8.3:31982439-31982458 | None:intergenic | 20.0% |
| !! | AAATACACATCAACATAAAA+GGG | + | chr8.3:31982438-31982457 | None:intergenic | 20.0% |
| !! | AATCTATACAGACATAATTT+AGG | + | chr8.3:31984139-31984158 | None:intergenic | 20.0% |
| !! | AGTTTAATGTTGTAATTTAG+AGG | - | chr8.3:31980853-31980872 | MS.gene056509:intron | 20.0% |
| !! | ATAATAGGAAAAACTATTGA+TGG | + | chr8.3:31979797-31979816 | None:intergenic | 20.0% |
| !! | ATGCAATTTGAAAGTTATAA+TGG | + | chr8.3:31984221-31984240 | None:intergenic | 20.0% |
| !! | CTATCAAATATAAAACCTAA+TGG | - | chr8.3:31979819-31979838 | MS.gene056509:intron | 20.0% |
| !! | TACTAACTTAAATATAGGAA+TGG | - | chr8.3:31983528-31983547 | MS.gene056509:intron | 20.0% |
| !! | TATCTGATACAAAGATATAT+TGG | - | chr8.3:31984281-31984300 | MS.gene056509:intron | 20.0% |
| !! | TCTATCATATCTTACTATAA+AGG | - | chr8.3:31983098-31983117 | MS.gene056509:intron | 20.0% |
| !! | TGATAAAACCTTAAAAGAAA+AGG | - | chr8.3:31979331-31979350 | MS.gene056509:CDS | 20.0% |
| !! | TTTGCTTGATATACTAATTA+AGG | - | chr8.3:31982850-31982869 | MS.gene056509:intron | 20.0% |
| !!! | AAATATAGGAATGGATTATT+GGG | - | chr8.3:31983537-31983556 | MS.gene056509:intron | 20.0% |
| !!! | TAAATATAGGAATGGATTAT+TGG | - | chr8.3:31983536-31983555 | MS.gene056509:intron | 20.0% |
| !!! | TTTTATATCAGAATAGTAGT+AGG | + | chr8.3:31981845-31981864 | None:intergenic | 20.0% |
| !!! | TTTTATGTTGATGTGTATTT+TGG | - | chr8.3:31982438-31982457 | MS.gene056509:CDS | 20.0% |
| ! | AAAAGATCAAAAGGAAGTTT+GGG | - | chr8.3:31981487-31981506 | MS.gene056509:intron | 25.0% |
| ! | ACAAGAAAAAATAATGAGCT+TGG | - | chr8.3:31981526-31981545 | MS.gene056509:intron | 25.0% |
| ! | ACAATAACCTCAAAAAAGTA+TGG | + | chr8.3:31981143-31981162 | None:intergenic | 25.0% |
| ! | ACATTCTTAAGATTCTATAC+AGG | + | chr8.3:31983054-31983073 | None:intergenic | 25.0% |
| ! | ACTTTCATTCAATTAGAAGA+GGG | + | chr8.3:31981635-31981654 | None:intergenic | 25.0% |
| ! | AGAATTGGAAAAGAAAATGT+AGG | - | chr8.3:31982186-31982205 | MS.gene056509:CDS | 25.0% |
| ! | ATCATATCTTACTATAAAGG+CGG | - | chr8.3:31983101-31983120 | MS.gene056509:intron | 25.0% |
| ! | CATTCTTAAGATTCTATACA+GGG | + | chr8.3:31983053-31983072 | None:intergenic | 25.0% |
| ! | GAATTGGAAAAGAAAATGTA+GGG | - | chr8.3:31982187-31982206 | MS.gene056509:CDS | 25.0% |
| ! | TAAAACAACAAAAGAACCAA+TGG | - | chr8.3:31982078-31982097 | MS.gene056509:intron | 25.0% |
| ! | TAAATATGTCTATTGACCTT+TGG | + | chr8.3:31979871-31979890 | None:intergenic | 25.0% |
| ! | TACTTTCATTCAATTAGAAG+AGG | + | chr8.3:31981636-31981655 | None:intergenic | 25.0% |
| ! | TATAAAACTTGAATTTGCAG+TGG | - | chr8.3:31981858-31981877 | MS.gene056509:intron | 25.0% |
| ! | TATGTGTCTGAATAAAGAAT+TGG | - | chr8.3:31982171-31982190 | MS.gene056509:CDS | 25.0% |
| ! | TCTACAAACCATTAATTTAC+AGG | + | chr8.3:31981682-31981701 | None:intergenic | 25.0% |
| ! | TGCATGGTATTTATTTCAAT+TGG | - | chr8.3:31983214-31983233 | MS.gene056509:intron | 25.0% |
| ! | TTACCAATCAAAAGATCAAA+AGG | - | chr8.3:31981478-31981497 | MS.gene056509:intron | 25.0% |
| ! | TTCCAACAATAACTTATCTA+AGG | - | chr8.3:31982608-31982627 | MS.gene056509:CDS | 25.0% |
| !! | AATTAATTTTAGGCATCACT+TGG | + | chr8.3:31983159-31983178 | None:intergenic | 25.0% |
| !! | AGAAGGAAACAAAATGTTTT+TGG | + | chr8.3:31979449-31979468 | None:intergenic | 25.0% |
| !! | CCTATATTTAAGTTAGTAGT+GGG | + | chr8.3:31983526-31983545 | None:intergenic | 25.0% |
| !! | TATCATTTTATAGTCTGTTG+AGG | - | chr8.3:31982225-31982244 | MS.gene056509:CDS | 25.0% |
| !! | TCCTATATTTAAGTTAGTAG+TGG | + | chr8.3:31983527-31983546 | None:intergenic | 25.0% |
| !!! | AATATAGGAATGGATTATTG+GGG | - | chr8.3:31983538-31983557 | MS.gene056509:intron | 25.0% |
| !!! | CAAAAATCAAGTGTTTTAGT+TGG | - | chr8.3:31982371-31982390 | MS.gene056509:intron | 25.0% |
| !!! | GAAATTAATGTTTTTGTTGG+TGG | - | chr8.3:31983893-31983912 | MS.gene056509:intron | 25.0% |
| !!! | GTTTTAATTAATGTCAAGCT+TGG | - | chr8.3:31979566-31979585 | MS.gene056509:intron | 25.0% |
| !!! | TATTTCAATTGGTTTTTGCA+GGG | - | chr8.3:31983225-31983244 | MS.gene056509:intron | 25.0% |
| !!! | TTATTTCAATTGGTTTTTGC+AGG | - | chr8.3:31983224-31983243 | MS.gene056509:intron | 25.0% |
| !!! | TTTGAAATCTTGATGTGTTT+TGG | - | chr8.3:31984054-31984073 | MS.gene056509:CDS | 25.0% |
| AAAAAGAACAAAGGCAAAAG+AGG | + | chr8.3:31981334-31981353 | None:intergenic | 30.0% | |
| AAACAAATATGCCCCAAAAA+AGG | + | chr8.3:31980637-31980656 | None:intergenic | 30.0% | |
| AAGATTTCAAAATCACCTTG+AGG | + | chr8.3:31984045-31984064 | None:intergenic | 30.0% | |
| AAGTGAAAAAGAAGAGGAAT+TGG | + | chr8.3:31980535-31980554 | None:intergenic | 30.0% | |
| AATAACTTATCTAAGGACCA+GGG | - | chr8.3:31982615-31982634 | MS.gene056509:CDS | 30.0% | |
| AATATCTTCTGAGCAATATG+AGG | - | chr8.3:31982041-31982060 | MS.gene056509:intron | 30.0% | |
| AGATTTCAAAATCACCTTGA+GGG | + | chr8.3:31984044-31984063 | None:intergenic | 30.0% | |
| AGTGAAAAAGAAGAGGAATT+GGG | + | chr8.3:31980534-31980553 | None:intergenic | 30.0% | |
| ATTGCCACGTACATAATTAT+TGG | - | chr8.3:31979697-31979716 | MS.gene056509:CDS | 30.0% | |
| CAAAAGATCAAAAGGAAGTT+TGG | - | chr8.3:31981486-31981505 | MS.gene056509:intron | 30.0% | |
| CAATAGAAAACAAGGATGAA+AGG | + | chr8.3:31982005-31982024 | None:intergenic | 30.0% | |
| CACTGTAGCTATGTTTATTT+AGG | - | chr8.3:31982480-31982499 | MS.gene056509:intron | 30.0% | |
| CATGTAAGCATTTCATCAAT+AGG | + | chr8.3:31981012-31981031 | None:intergenic | 30.0% | |
| CCATTAATTTACAGGAATTC+AGG | + | chr8.3:31981674-31981693 | None:intergenic | 30.0% | |
| CCCACTACTAACTTAAATAT+AGG | - | chr8.3:31983523-31983542 | MS.gene056509:intron | 30.0% | |
| CCTGAATTCCTGTAAATTAA+TGG | - | chr8.3:31981671-31981690 | MS.gene056509:intron | 30.0% | |
| CGGAAAACAATTAAACATAG+TGG | + | chr8.3:31980611-31980630 | None:intergenic | 30.0% | |
| CTAATGGAATTCATTCCAAA+AGG | - | chr8.3:31981569-31981588 | MS.gene056509:intron | 30.0% | |
| CTATACAGACATAATTTAGG+TGG | + | chr8.3:31984136-31984155 | None:intergenic | 30.0% | |
| CTCAGTTTCTGAATTCTTAA+GGG | - | chr8.3:31979725-31979744 | MS.gene056509:CDS | 30.0% | |
| CTTAAATGCTCAAACACAAA+TGG | + | chr8.3:31979954-31979973 | None:intergenic | 30.0% | |
| GAAGTGCAAAAAAAAAGTGA+AGG | + | chr8.3:31981312-31981331 | None:intergenic | 30.0% | |
| GGTTAACTATTAGGATGAAA+GGG | - | chr8.3:31983746-31983765 | MS.gene056509:intron | 30.0% | |
| GTCCTTAGATAAGTTATTGT+TGG | + | chr8.3:31982613-31982632 | None:intergenic | 30.0% | |
| TAAATATACACCCAACACAT+TGG | - | chr8.3:31982513-31982532 | MS.gene056509:intron | 30.0% | |
| TAAGCATGCAATAGAAAACA+AGG | + | chr8.3:31982013-31982032 | None:intergenic | 30.0% | |
| TAAGCATTTCATCAATAGGA+AGG | + | chr8.3:31981008-31981027 | None:intergenic | 30.0% | |
| TAGGATCAATGTTAATAACG+AGG | + | chr8.3:31982337-31982356 | None:intergenic | 30.0% | |
| TATTAACTTTGTCAGACCAA+TGG | + | chr8.3:31982899-31982918 | None:intergenic | 30.0% | |
| TCTCAGTTTCTGAATTCTTA+AGG | - | chr8.3:31979724-31979743 | MS.gene056509:CDS | 30.0% | |
| TGGTTAACTATTAGGATGAA+AGG | - | chr8.3:31983745-31983764 | MS.gene056509:intron | 30.0% | |
| TTCTGAATTCTTAAGGGATT+TGG | - | chr8.3:31979731-31979750 | MS.gene056509:CDS | 30.0% | |
| TTGACCAATAATTATGTACG+TGG | + | chr8.3:31979704-31979723 | None:intergenic | 30.0% | |
| ! | ATACATTGCATCTTACCTTT+TGG | + | chr8.3:31981587-31981606 | None:intergenic | 30.0% |
| ! | ATGCATACATGTTCATTTTG+TGG | - | chr8.3:31982962-31982981 | MS.gene056509:intron | 30.0% |
| ! | CTTCCTTTTGATCTTTTGAT+TGG | + | chr8.3:31981484-31981503 | None:intergenic | 30.0% |
| ! | GAACATACTGTATTTTGCAT+GGG | + | chr8.3:31983022-31983041 | None:intergenic | 30.0% |
| ! | GGAAAAACTATTGATGGTAA+CGG | + | chr8.3:31979791-31979810 | None:intergenic | 30.0% |
| ! | TGAACATACTGTATTTTGCA+TGG | + | chr8.3:31983023-31983042 | None:intergenic | 30.0% |
| !! | AACATTTTGTTTCCTTCTAC+AGG | - | chr8.3:31979451-31979470 | MS.gene056509:intron | 30.0% |
| !! | CAAAGATATATTGGTTCTAC+AGG | - | chr8.3:31984290-31984309 | MS.gene056509:intron | 30.0% |
| !!! | GTCTTTTCTGGTTAACTATT+AGG | - | chr8.3:31983737-31983756 | MS.gene056509:intron | 30.0% |
| !!! | TGATGTGTATTTTGGAATCT+AGG | - | chr8.3:31982446-31982465 | MS.gene056509:CDS | 30.0% |
| AAAATTCCGAGTCAGATTTC+TGG | + | chr8.3:31980354-31980373 | None:intergenic | 35.0% | |
| AAGCTATACACAAGTAGGTT+TGG | + | chr8.3:31980940-31980959 | None:intergenic | 35.0% | |
| AAGTTTGGGTAGTTCAAACA+TGG | - | chr8.3:31981501-31981520 | MS.gene056509:intron | 35.0% | |
| AATTTACAGGAATTCAGGCA+AGG | + | chr8.3:31981669-31981688 | None:intergenic | 35.0% | |
| ACATCTTCCAATTGATCCTT+TGG | - | chr8.3:31982798-31982817 | MS.gene056509:intron | 35.0% | |
| AGATGTCTTAACCAAGTCTT+TGG | + | chr8.3:31982784-31982803 | None:intergenic | 35.0% | |
| AGTCAACAAACAGTACAATC+AGG | - | chr8.3:31980485-31980504 | MS.gene056509:intron | 35.0% | |
| ATAAACATAGCTACAGTGTG+TGG | + | chr8.3:31982478-31982497 | None:intergenic | 35.0% | |
| ATAGACAGTGAAAAATCAGC+AGG | + | chr8.3:31983189-31983208 | None:intergenic | 35.0% | |
| ATGGTGTTCATTCACAACTT+TGG | - | chr8.3:31983650-31983669 | MS.gene056509:intron | 35.0% | |
| ATTCTTCCTCTATCTGAATC+AGG | + | chr8.3:31984182-31984201 | None:intergenic | 35.0% | |
| CAATAACTTATCTAAGGACC+AGG | - | chr8.3:31982614-31982633 | MS.gene056509:CDS | 35.0% | |
| CATCACATAAACAGAGTTCT+GGG | + | chr8.3:31980433-31980452 | None:intergenic | 35.0% | |
| GATAACATGTCAACATCCAT+TGG | + | chr8.3:31982097-31982116 | None:intergenic | 35.0% | |
| GGAGAGAAGAAAAAGAACAA+AGG | + | chr8.3:31981343-31981362 | None:intergenic | 35.0% | |
| GTATTTCCAGAAATCTGACT+CGG | - | chr8.3:31980345-31980364 | MS.gene056509:intron | 35.0% | |
| GTCAACAAACAGTACAATCA+GGG | - | chr8.3:31980486-31980505 | MS.gene056509:intron | 35.0% | |
| GTCTAGTGCAGGAAATTTAT+CGG | - | chr8.3:31981755-31981774 | MS.gene056509:intron | 35.0% | |
| GTTTGGTTAACAACTGTATG+AGG | + | chr8.3:31983451-31983470 | None:intergenic | 35.0% | |
| TAAATTTCCTGCACTAGACA+AGG | + | chr8.3:31981754-31981773 | None:intergenic | 35.0% | |
| TACAGGTTAACTTTGTCAAC+AGG | - | chr8.3:31983674-31983693 | MS.gene056509:intron | 35.0% | |
| TACATGTGCTAACGGTATAT+GGG | + | chr8.3:31982412-31982431 | None:intergenic | 35.0% | |
| TCTTAAGATTCTATACAGGG+TGG | + | chr8.3:31983050-31983069 | None:intergenic | 35.0% | |
| TGTCACAGAACTTACATTCT+GGG | + | chr8.3:31981928-31981947 | None:intergenic | 35.0% | |
| TGTTAGTCCAAAGGATCAAT+TGG | + | chr8.3:31982808-31982827 | None:intergenic | 35.0% | |
| TTACATGTGCTAACGGTATA+TGG | + | chr8.3:31982413-31982432 | None:intergenic | 35.0% | |
| TTCATCAATAGGAAGGATGA+AGG | + | chr8.3:31981001-31981020 | None:intergenic | 35.0% | |
| TTCTTCCTCTATCTGAATCA+GGG | + | chr8.3:31984181-31984200 | None:intergenic | 35.0% | |
| TTTACACAGCTGAAGGAATA+TGG | + | chr8.3:31979848-31979867 | None:intergenic | 35.0% | |
| ! | AATTTTTCCTTCACCTCATG+AGG | + | chr8.3:31981460-31981479 | None:intergenic | 35.0% |
| ! | ACAATCAGGGTTTTCTAACT+GGG | - | chr8.3:31980499-31980518 | MS.gene056509:intron | 35.0% |
| ! | ATACATGCATCTAGAAGTGT+AGG | - | chr8.3:31982307-31982326 | MS.gene056509:intron | 35.0% |
| ! | CTTAGGCTCCTTTTCTTTTA+AGG | + | chr8.3:31979342-31979361 | None:intergenic | 35.0% |
| ! | GCAATTTTCACAATCATGGA+AGG | + | chr8.3:31980298-31980317 | None:intergenic | 35.0% |
| ! | GTATTAAGTGCACCATTTTG+AGG | + | chr8.3:31983427-31983446 | None:intergenic | 35.0% |
| ! | TACAATCAGGGTTTTCTAAC+TGG | - | chr8.3:31980498-31980517 | MS.gene056509:intron | 35.0% |
| ! | TATGGTCTACGAAAGTATAC+CGG | + | chr8.3:31981125-31981144 | None:intergenic | 35.0% |
| ! | TCAGTTACTTTCTGCATACT+TGG | + | chr8.3:31981386-31981405 | None:intergenic | 35.0% |
| ! | TGCTGCAATTTTCACAATCA+TGG | + | chr8.3:31980302-31980321 | None:intergenic | 35.0% |
| ! | TGTTTTCCGAGTCCTTTTTT+GGG | - | chr8.3:31980622-31980641 | MS.gene056509:intron | 35.0% |
| ! | TTGTTTTCCGAGTCCTTTTT+TGG | - | chr8.3:31980621-31980640 | MS.gene056509:intron | 35.0% |
| !! | AAGGGTATTACATGTGCTAA+CGG | + | chr8.3:31982420-31982439 | None:intergenic | 35.0% |
| !! | AGCTTAATTGGTTTGAGCTA+AGG | - | chr8.3:31982648-31982667 | MS.gene056509:CDS | 35.0% |
| !! | GCTTAATTGGTTTGAGCTAA+GGG | - | chr8.3:31982649-31982668 | MS.gene056509:CDS | 35.0% |
| !! | GTAAAGCTTTGTTAGTCCAA+AGG | + | chr8.3:31982817-31982836 | None:intergenic | 35.0% |
| !!! | TCGTAGACCATACTTTTTTG+AGG | - | chr8.3:31981133-31981152 | MS.gene056509:intron | 35.0% |
| !!! | TCTTGATGTGTTTTGGTATC+TGG | - | chr8.3:31984061-31984080 | MS.gene056509:CDS | 35.0% |
| AAAGGGAGCTTAAACGACAA+AGG | - | chr8.3:31983763-31983782 | MS.gene056509:intron | 40.0% | |
| AACCTGATAGTTAGCCCATT+CGG | + | chr8.3:31979516-31979535 | None:intergenic | 40.0% | |
| AATGAGCTTGGTAAAACACC+AGG | - | chr8.3:31981538-31981557 | MS.gene056509:intron | 40.0% | |
| AATTGAAAGGGATCTGTGTC+AGG | - | chr8.3:31980394-31980413 | MS.gene056509:intron | 40.0% | |
| AATTTAGGTGGCACATGGTA+TGG | + | chr8.3:31984124-31984143 | None:intergenic | 40.0% | |
| AGAGGAAGCAGTAAACAGTT+CGG | + | chr8.3:31980463-31980482 | None:intergenic | 40.0% | |
| AGGGCTCTCAATTGAAATTC+GGG | - | chr8.3:31983244-31983263 | MS.gene056509:intron | 40.0% | |
| AGTGCAGGAAATTTATCGGT+AGG | - | chr8.3:31981759-31981778 | MS.gene056509:intron | 40.0% | |
| ATATGCCCCAAAAAAGGACT+CGG | + | chr8.3:31980631-31980650 | None:intergenic | 40.0% | |
| ATCCAGTCAGAAGTAGGAAA+AGG | + | chr8.3:31983854-31983873 | None:intergenic | 40.0% | |
| ATGAGCATATATGCCACCAT+GGG | + | chr8.3:31981090-31981109 | None:intergenic | 40.0% | |
| ATGAGCTTGGTAAAACACCA+GGG | - | chr8.3:31981539-31981558 | MS.gene056509:intron | 40.0% | |
| ATGCTCAAACACAAATGGAC+AGG | + | chr8.3:31979949-31979968 | None:intergenic | 40.0% | |
| ATTTAGGTGGCACATGGTAT+GGG | + | chr8.3:31984123-31984142 | None:intergenic | 40.0% | |
| CAGATAGAGGAAGAATCTAG+TGG | - | chr8.3:31984186-31984205 | MS.gene056509:CDS | 40.0% | |
| CAGGGCTCTCAATTGAAATT+CGG | - | chr8.3:31983243-31983262 | MS.gene056509:intron | 40.0% | |
| CCAGAACTCTGTTTATGTGA+TGG | - | chr8.3:31980431-31980450 | MS.gene056509:CDS | 40.0% | |
| CCATCACATAAACAGAGTTC+TGG | + | chr8.3:31980434-31980453 | None:intergenic | 40.0% | |
| GAAGGAATATGGATCCCATT+AGG | + | chr8.3:31979837-31979856 | None:intergenic | 40.0% | |
| GACATAATTTAGGTGGCACA+TGG | + | chr8.3:31984129-31984148 | None:intergenic | 40.0% | |
| GATGATGAAAAGTCCAGAGT+AGG | + | chr8.3:31981364-31981383 | None:intergenic | 40.0% | |
| GATGTTGACATGTTATCGCA+GGG | - | chr8.3:31982100-31982119 | MS.gene056509:intron | 40.0% | |
| GTAGCAAGCTATACACAAGT+AGG | + | chr8.3:31980945-31980964 | None:intergenic | 40.0% | |
| GTCTTAACCAAGTCTTTGGA+AGG | + | chr8.3:31982780-31982799 | None:intergenic | 40.0% | |
| GTGCAGGAAATTTATCGGTA+GGG | - | chr8.3:31981760-31981779 | MS.gene056509:intron | 40.0% | |
| GTGTCACAGAACTTACATTC+TGG | + | chr8.3:31981929-31981948 | None:intergenic | 40.0% | |
| TACATTGCGACATAAGGATG+TGG | + | chr8.3:31981065-31981084 | None:intergenic | 40.0% | |
| TAGGTACGACAGACATAGTT+TGG | + | chr8.3:31983468-31983487 | None:intergenic | 40.0% | |
| TCACTGTCTATATGCATGCA+TGG | - | chr8.3:31983198-31983217 | MS.gene056509:intron | 40.0% | |
| TCATTCACAACTTTGGCTAC+AGG | - | chr8.3:31983657-31983676 | MS.gene056509:intron | 40.0% | |
| TCCAACACTTCCAATGTGTT+GGG | + | chr8.3:31982526-31982545 | None:intergenic | 40.0% | |
| TCTCGTATTCACTCTTGATC+CGG | + | chr8.3:31984000-31984019 | None:intergenic | 40.0% | |
| TGAGCTAAGGGTTAAGTAGT+TGG | - | chr8.3:31982661-31982680 | MS.gene056509:intron | 40.0% | |
| TTAAGGACCTTCCAAAGACT+TGG | - | chr8.3:31982770-31982789 | MS.gene056509:intron | 40.0% | |
| TTATGTACGTGGCAATTACC+TGG | + | chr8.3:31979693-31979712 | None:intergenic | 40.0% | |
| TTCAACCCTGATTCAGATAG+AGG | - | chr8.3:31984173-31984192 | MS.gene056509:intron | 40.0% | |
| TTGCTGTATTACAGATGACC+CGG | - | chr8.3:31983381-31983400 | MS.gene056509:intron | 40.0% | |
| ! | AACTGATGCATTGACATGCA+GGG | - | chr8.3:31981400-31981419 | MS.gene056509:intron | 40.0% |
| ! | ATTGATTGCCAGAGTACCAT+TGG | - | chr8.3:31982880-31982899 | MS.gene056509:intron | 40.0% |
| ! | CTTTTTCTTCTCTCCTACTC+TGG | - | chr8.3:31981348-31981367 | MS.gene056509:intron | 40.0% |
| ! | GCTAAATCTCTCGTCTTTTC+TGG | - | chr8.3:31983725-31983744 | MS.gene056509:intron | 40.0% |
| ! | GTTCTGTGACACTTGTTAGT+TGG | - | chr8.3:31981937-31981956 | MS.gene056509:intron | 40.0% |
| ! | TAACTGATGCATTGACATGC+AGG | - | chr8.3:31981399-31981418 | MS.gene056509:intron | 40.0% |
| ! | TGGGCTAACTATCAGGTTTT+TGG | - | chr8.3:31979518-31979537 | MS.gene056509:intron | 40.0% |
| ! | TTTAAGTTAGTAGTGGGACC+AGG | + | chr8.3:31983520-31983539 | None:intergenic | 40.0% |
| ! | TTTTCCTACTTCTGACTGGA+TGG | - | chr8.3:31983853-31983872 | MS.gene056509:intron | 40.0% |
| !! | AGCATTTAAGTTGCATGACG+TGG | - | chr8.3:31979964-31979983 | MS.gene056509:intron | 40.0% |
| !! | ATGAAAGGTTGTGTCACTTC+TGG | + | chr8.3:31981990-31982009 | None:intergenic | 40.0% |
| !! | GAAGAATCTAGTGGACTATG+TGG | - | chr8.3:31984195-31984214 | MS.gene056509:CDS | 40.0% |
| !! | GCATTTAAGTTGCATGACGT+GGG | - | chr8.3:31979965-31979984 | MS.gene056509:intron | 40.0% |
| !! | GTACTGTTTGTTGACTTGAG+AGG | + | chr8.3:31980481-31980500 | None:intergenic | 40.0% |
| !! | GTTTTCCGAGTCCTTTTTTG+GGG | - | chr8.3:31980623-31980642 | MS.gene056509:intron | 40.0% |
| !!! | GTTAGTTTTTTCTCCTTGCC+AGG | + | chr8.3:31982704-31982723 | None:intergenic | 40.0% |
| !!! | TGTTTTTGTTGGTGGTTCTC+AGG | - | chr8.3:31983901-31983920 | MS.gene056509:intron | 40.0% |
| AAAGGCGGAAGCAGTCTAAT+AGG | - | chr8.3:31983781-31983800 | MS.gene056509:intron | 45.0% | |
| AACTTATCTAAGGACCAGGG+AGG | - | chr8.3:31982618-31982637 | MS.gene056509:CDS | 45.0% | |
| AAGGCGGAAGCAGTCTAATA+GGG | - | chr8.3:31983782-31983801 | MS.gene056509:intron | 45.0% | |
| AATGATCAGCATGTGGGTGA+AGG | - | chr8.3:31984360-31984379 | MS.gene056509:CDS | 45.0% | |
| ACCAAAATGCCGCAACTAGA+CGG | - | chr8.3:31982562-31982581 | MS.gene056509:intron | 45.0% | |
| ACCTGATAGTTAGCCCATTC+GGG | + | chr8.3:31979515-31979534 | None:intergenic | 45.0% | |
| ACTTATCTAAGGACCAGGGA+GGG | - | chr8.3:31982619-31982638 | MS.gene056509:CDS | 45.0% | |
| AGCTGATGGTAAACCTCATG+AGG | - | chr8.3:31981444-31981463 | MS.gene056509:intron | 45.0% | |
| AGGAGGAGCTTCAAAGATCT+CGG | + | chr8.3:31980239-31980258 | None:intergenic | 45.0% | |
| ATACCAAGGAACGAGGATCT+TGG | - | chr8.3:31984327-31984346 | MS.gene056509:CDS | 45.0% | |
| ATGACCATCCAGTCAGAAGT+AGG | + | chr8.3:31983860-31983879 | None:intergenic | 45.0% | |
| ATTGCGACATAAGGATGTGG+TGG | + | chr8.3:31981062-31981081 | None:intergenic | 45.0% | |
| CATACCATTTGGAGAAGGCA+TGG | + | chr8.3:31981263-31981282 | None:intergenic | 45.0% | |
| CATGCCTTCTCCAAATGGTA+TGG | - | chr8.3:31981261-31981280 | MS.gene056509:intron | 45.0% | |
| CCACGAGTCTTTCATTCTAC+AGG | - | chr8.3:31979597-31979616 | MS.gene056509:intron | 45.0% | |
| CCTGTAGAATGAAAGACTCG+TGG | + | chr8.3:31979600-31979619 | None:intergenic | 45.0% | |
| CCTTCAGCTGTGTAAACCAA+AGG | - | chr8.3:31979852-31979871 | MS.gene056509:intron | 45.0% | |
| CTCAATTGAAATTCGGGGAG+AGG | - | chr8.3:31983250-31983269 | MS.gene056509:intron | 45.0% | |
| CTCCAACACTTCCAATGTGT+TGG | + | chr8.3:31982527-31982546 | None:intergenic | 45.0% | |
| CTGGAGGAATGGTTAATGCT+GGG | - | chr8.3:31983620-31983639 | MS.gene056509:intron | 45.0% | |
| CTTGTTAGTTGGCTACTGCA+TGG | - | chr8.3:31981948-31981967 | MS.gene056509:intron | 45.0% | |
| GATGAGCATATATGCCACCA+TGG | + | chr8.3:31981091-31981110 | None:intergenic | 45.0% | |
| GCTAAGGGTTAAGTAGTTGG+AGG | - | chr8.3:31982664-31982683 | MS.gene056509:intron | 45.0% | |
| GGAATTCAGGCAAGGATTAC+TGG | + | chr8.3:31981661-31981680 | None:intergenic | 45.0% | |
| GGATGTTGACATGTTATCGC+AGG | - | chr8.3:31982099-31982118 | MS.gene056509:intron | 45.0% | |
| GGCAGTTCAGTACCTCAAAA+TGG | - | chr8.3:31983412-31983431 | MS.gene056509:intron | 45.0% | |
| GGCATGGCATAAGGACTAAA+AGG | + | chr8.3:31981247-31981266 | None:intergenic | 45.0% | |
| GGGCTCTCAATTGAAATTCG+GGG | - | chr8.3:31983245-31983264 | MS.gene056509:intron | 45.0% | |
| GTACGCAGCTACAGGAAAAA+AGG | - | chr8.3:31980162-31980181 | MS.gene056509:CDS | 45.0% | |
| GTTAAGTAGTTGGAGGTCCA+GGG | - | chr8.3:31982671-31982690 | MS.gene056509:intron | 45.0% | |
| TACCAAGGAACGAGGATCTT+GGG | - | chr8.3:31984328-31984347 | MS.gene056509:CDS | 45.0% | |
| TAGATCAAGTACGCAGCTAC+AGG | - | chr8.3:31980154-31980173 | MS.gene056509:CDS | 45.0% | |
| TATACCTCCACCTGGATTCA+TGG | - | chr8.3:31979630-31979649 | MS.gene056509:intron | 45.0% | |
| TATCCTTCTATACCTCCACC+TGG | - | chr8.3:31979622-31979641 | MS.gene056509:intron | 45.0% | |
| TATGCCATGCCTTCTCCAAA+TGG | - | chr8.3:31981256-31981275 | MS.gene056509:intron | 45.0% | |
| TATGTCGCAATGTATCCCCA+TGG | - | chr8.3:31981071-31981090 | MS.gene056509:intron | 45.0% | |
| TATTACCTGCTTTCGCAACC+TGG | + | chr8.3:31983823-31983842 | None:intergenic | 45.0% | |
| TCCACCATACCATTTGGAGA+AGG | + | chr8.3:31981268-31981287 | None:intergenic | 45.0% | |
| TGAGCATATATGCCACCATG+GGG | + | chr8.3:31981089-31981108 | None:intergenic | 45.0% | |
| TGAGCTTGGTAAAACACCAG+GGG | - | chr8.3:31981540-31981559 | MS.gene056509:intron | 45.0% | |
| TGGGGATACATTGCGACATA+AGG | + | chr8.3:31981071-31981090 | None:intergenic | 45.0% | |
| TGGTAAACCTCATGAGGTGA+AGG | - | chr8.3:31981450-31981469 | MS.gene056509:intron | 45.0% | |
| TGTGAATGAACACCATCTCG+TGG | + | chr8.3:31983646-31983665 | None:intergenic | 45.0% | |
| TTCATTGCCTTGTCTAGTGC+AGG | - | chr8.3:31981744-31981763 | MS.gene056509:intron | 45.0% | |
| TTGAAGACTGCTCCTGTAGA+AGG | + | chr8.3:31979466-31979485 | None:intergenic | 45.0% | |
| TTGCGACATAAGGATGTGGT+GGG | + | chr8.3:31981061-31981080 | None:intergenic | 45.0% | |
| TTGTCAGACCAATGGTACTC+TGG | + | chr8.3:31982891-31982910 | None:intergenic | 45.0% | |
| ! | AAGGGATCTGTGTCAGGTTT+TGG | - | chr8.3:31980400-31980419 | MS.gene056509:intron | 45.0% |
| ! | AATCCAGGTGGAGGTATAGA+AGG | + | chr8.3:31979628-31979647 | None:intergenic | 45.0% |
| ! | ACCCAACACATTGGAAGTGT+TGG | - | chr8.3:31982522-31982541 | MS.gene056509:intron | 45.0% |
| ! | ACTGATGCATTGACATGCAG+GGG | - | chr8.3:31981401-31981420 | MS.gene056509:intron | 45.0% |
| ! | AGCCTTTTCCTACTTCTGAC+TGG | - | chr8.3:31983849-31983868 | MS.gene056509:intron | 45.0% |
| ! | CCTTTGGTTTACACAGCTGA+AGG | + | chr8.3:31979855-31979874 | None:intergenic | 45.0% |
| ! | GAAGCATCCACCATACCATT+TGG | + | chr8.3:31981274-31981293 | None:intergenic | 45.0% |
| ! | GAGAGGCAGGATTCTTTTGA+AGG | - | chr8.3:31983267-31983286 | MS.gene056509:intron | 45.0% |
| ! | GTTTTCTAACTGGGCCAAGT+AGG | - | chr8.3:31980508-31980527 | MS.gene056509:intron | 45.0% |
| ! | TTCTGAGAATGCTTCCCTCA+AGG | - | chr8.3:31984027-31984046 | MS.gene056509:CDS | 45.0% |
| ! | TTTGGAGAAGGCATGGCATA+AGG | + | chr8.3:31981256-31981275 | None:intergenic | 45.0% |
| !! | AGGTTGTGTCACTTCTGGTT+TGG | + | chr8.3:31981985-31982004 | None:intergenic | 45.0% |
| !! | CAACACATTGGAAGTGTTGG+AGG | - | chr8.3:31982525-31982544 | MS.gene056509:intron | 45.0% |
| !! | TTGGTTCTACAGGAGAGACT+CGG | - | chr8.3:31984300-31984319 | MS.gene056509:intron | 45.0% |
| !!! | ACTGAACTGCCATTTTGAGC+CGG | + | chr8.3:31983403-31983422 | None:intergenic | 45.0% |
| ACAGATGACCCGGCTCAAAA+TGG | - | chr8.3:31983391-31983410 | MS.gene056509:intron | 50.0% | |
| ACCAAGGAACGAGGATCTTG+GGG | - | chr8.3:31984329-31984348 | MS.gene056509:CDS | 50.0% | |
| ACCTGGACACCCCACATATA+TGG | + | chr8.3:31979676-31979695 | None:intergenic | 50.0% | |
| ATTCCATTAGCAGATGCCCC+TGG | + | chr8.3:31981559-31981578 | None:intergenic | 50.0% | |
| ATTGAAATTCGGGGAGAGGC+AGG | - | chr8.3:31983254-31983273 | MS.gene056509:intron | 50.0% | |
| CAAGCCCACCCATATATGTG+GGG | - | chr8.3:31979664-31979683 | MS.gene056509:CDS | 50.0% | |
| CACCCACATGCTGATCATTC+TGG | + | chr8.3:31984359-31984378 | None:intergenic | 50.0% | |
| CAGCATATGATGCCTCCCTA+TGG | - | chr8.3:31981032-31981051 | MS.gene056509:intron | 50.0% | |
| CATTCCTGCAATGCACGGAA+AGG | - | chr8.3:31983579-31983598 | MS.gene056509:intron | 50.0% | |
| CCAAAATGCCGCAACTAGAC+GGG | - | chr8.3:31982563-31982582 | MS.gene056509:intron | 50.0% | |
| CCAAGCCCACCCATATATGT+GGG | - | chr8.3:31979663-31979682 | MS.gene056509:CDS | 50.0% | |
| CCTGATAGTTAGCCCATTCG+GGG | + | chr8.3:31979514-31979533 | None:intergenic | 50.0% | |
| CCTGGACACCCCACATATAT+GGG | + | chr8.3:31979675-31979694 | None:intergenic | 50.0% | |
| CTTGATGCCATGAATCCAGG+TGG | + | chr8.3:31979640-31979659 | None:intergenic | 50.0% | |
| CTTTCCGTGCATTGCAGGAA+TGG | + | chr8.3:31983581-31983600 | None:intergenic | 50.0% | |
| GAAGAGGAATTGGGCCTACT+TGG | + | chr8.3:31980525-31980544 | None:intergenic | 50.0% | |
| GACACCCCACATATATGGGT+GGG | + | chr8.3:31979671-31979690 | None:intergenic | 50.0% | |
| GAGCAGTCTTCAACGACAAC+CGG | - | chr8.3:31979473-31979492 | MS.gene056509:intron | 50.0% | |
| GCCTTCTCCAAATGGTATGG+TGG | - | chr8.3:31981264-31981283 | MS.gene056509:intron | 50.0% | |
| GCTACGTCACAGGTCTTTGT+GGG | - | chr8.3:31979374-31979393 | MS.gene056509:CDS | 50.0% | |
| GCTGGAGGAATGGTTAATGC+TGG | - | chr8.3:31983619-31983638 | MS.gene056509:intron | 50.0% | |
| GGACTTGATGCCATGAATCC+AGG | + | chr8.3:31979643-31979662 | None:intergenic | 50.0% | |
| GGAGGAGCTTCAAAGATCTC+GGG | + | chr8.3:31980238-31980257 | None:intergenic | 50.0% | |
| GGAGGGTTGGGTAGCTTAAT+TGG | - | chr8.3:31982636-31982655 | MS.gene056509:CDS | 50.0% | |
| GGCCAGAATGATCAGCATGT+GGG | - | chr8.3:31984354-31984373 | MS.gene056509:CDS | 50.0% | |
| GGGAGCTTAAACGACAAAGG+CGG | - | chr8.3:31983766-31983785 | MS.gene056509:intron | 50.0% | |
| GGTTAAGTAGTTGGAGGTCC+AGG | - | chr8.3:31982670-31982689 | MS.gene056509:intron | 50.0% | |
| GTACCTTCTACTGCAGTTGC+TGG | - | chr8.3:31983601-31983620 | MS.gene056509:intron | 50.0% | |
| TACTGCAGTTGCTGGAGGAA+TGG | - | chr8.3:31983609-31983628 | MS.gene056509:intron | 50.0% | |
| TAGATCCAGGTTGCGAAAGC+AGG | - | chr8.3:31983815-31983834 | MS.gene056509:intron | 50.0% | |
| TCCACCATTCCTGCAATGCA+CGG | - | chr8.3:31983574-31983593 | MS.gene056509:intron | 50.0% | |
| TGCGACATAAGGATGTGGTG+GGG | + | chr8.3:31981060-31981079 | None:intergenic | 50.0% | |
| TGCTACGTCACAGGTCTTTG+TGG | - | chr8.3:31979373-31979392 | MS.gene056509:CDS | 50.0% | |
| TGTTGTGAGAGGACCAGCAA+CGG | + | chr8.3:31983494-31983513 | None:intergenic | 50.0% | |
| TTCAACGACAACCGGTACTC+CGG | - | chr8.3:31979481-31979500 | MS.gene056509:intron | 50.0% | |
| ! | AAGTATACCGGAGGCATGGA+TGG | + | chr8.3:31981113-31981132 | None:intergenic | 50.0% |
| ! | ACGAAAGTATACCGGAGGCA+TGG | + | chr8.3:31981117-31981136 | None:intergenic | 50.0% |
| ! | AGTGGTGAGAGTGCAAGTGA+AGG | - | chr8.3:31981876-31981895 | MS.gene056509:intron | 50.0% |
| ! | AGTGTTGGAGGCTGCAATGA+AGG | - | chr8.3:31982537-31982556 | MS.gene056509:intron | 50.0% |
| ! | CACATATATGGGTGGGCTTG+GGG | + | chr8.3:31979664-31979683 | None:intergenic | 50.0% |
| ! | CCACATATATGGGTGGGCTT+GGG | + | chr8.3:31979665-31979684 | None:intergenic | 50.0% |
| ! | GGTCTACGAAAGTATACCGG+AGG | + | chr8.3:31981122-31981141 | None:intergenic | 50.0% |
| ! | TGGTTCTACAGGAGAGACTC+GGG | - | chr8.3:31984301-31984320 | MS.gene056509:intron | 50.0% |
| !! | GCAAGTGAAGGCACTAGTGA+AGG | - | chr8.3:31981888-31981907 | MS.gene056509:intron | 50.0% |
| !! | GCAGGAATGGTGGATGAAGT+TGG | + | chr8.3:31983568-31983587 | None:intergenic | 50.0% |
| !! | GGATCTGTGTCAGGTTTTGG+AGG | - | chr8.3:31980403-31980422 | MS.gene056509:intron | 50.0% |
| !! | TCTTTGAAGCTCCTCCTGTG+TGG | - | chr8.3:31980242-31980261 | MS.gene056509:CDS | 50.0% |
| !!! | CTGAACTGCCATTTTGAGCC+GGG | + | chr8.3:31983402-31983421 | None:intergenic | 50.0% |
| AAGACCTGTGACGTAGCAGC+TGG | + | chr8.3:31979371-31979390 | None:intergenic | 55.0% | |
| AAGGAACGAGGATCTTGGGG+AGG | - | chr8.3:31984332-31984351 | MS.gene056509:CDS | 55.0% | |
| ACATGGGATTGGGAGTGGCA+GGG | - | chr8.3:31980271-31980290 | MS.gene056509:CDS | 55.0% | |
| AGACGGGCAGACTGCAATGA+AGG | - | chr8.3:31982579-31982598 | MS.gene056509:intron | 55.0% | |
| AGAGACTCGGGGAGATACCA+AGG | - | chr8.3:31984313-31984332 | MS.gene056509:intron | 55.0% | |
| AGAGGACCAGCAACGGACAT+AGG | + | chr8.3:31983487-31983506 | None:intergenic | 55.0% | |
| AGGAACGAGGATCTTGGGGA+GGG | - | chr8.3:31984333-31984352 | MS.gene056509:CDS | 55.0% | |
| ATCTAAGGACCAGGGAGGGT+TGG | - | chr8.3:31982623-31982642 | MS.gene056509:CDS | 55.0% | |
| CCCAAGCCCACCCATATATG+TGG | - | chr8.3:31979662-31979681 | MS.gene056509:CDS | 55.0% | |
| CCTCCAGCAACTGCAGTAGA+AGG | + | chr8.3:31983607-31983626 | None:intergenic | 55.0% | |
| CCTTCTACTGCAGTTGCTGG+AGG | - | chr8.3:31983604-31983623 | MS.gene056509:intron | 55.0% | |
| CGGGATAGTGCGATGTTACG+AGG | + | chr8.3:31980219-31980238 | None:intergenic | 55.0% | |
| GACATGCAGGGGAATACTCC+AGG | - | chr8.3:31981412-31981431 | MS.gene056509:intron | 55.0% | |
| GATGCACATGGGATTGGGAG+TGG | - | chr8.3:31980266-31980285 | MS.gene056509:CDS | 55.0% | |
| GATGCCATGAATCCAGGTGG+AGG | + | chr8.3:31979637-31979656 | None:intergenic | 55.0% | |
| GGACACCCCACATATATGGG+TGG | + | chr8.3:31979672-31979691 | None:intergenic | 55.0% | |
| GGACCAGGAACTGTTGTGAG+AGG | + | chr8.3:31983505-31983524 | None:intergenic | 55.0% | |
| GGGAATCTGCACGTAGATCC+AGG | - | chr8.3:31983802-31983821 | MS.gene056509:intron | 55.0% | |
| GGGCCAGAATGATCAGCATG+TGG | - | chr8.3:31984353-31984372 | MS.gene056509:CDS | 55.0% | |
| GGTACCTTTCCGTGCATTGC+AGG | + | chr8.3:31983586-31983605 | None:intergenic | 55.0% | |
| GGTCCTCTCACAACAGTTCC+TGG | - | chr8.3:31983499-31983518 | MS.gene056509:intron | 55.0% | |
| GGTTCTACAGGAGAGACTCG+GGG | - | chr8.3:31984302-31984321 | MS.gene056509:intron | 55.0% | |
| GTCGCAATGTATCCCCATGG+TGG | - | chr8.3:31981074-31981093 | MS.gene056509:intron | 55.0% | |
| GTCGTACCTATGTCCGTTGC+TGG | - | chr8.3:31983478-31983497 | MS.gene056509:intron | 55.0% | |
| GTGGCGATGCACATGGGATT+GGG | - | chr8.3:31980261-31980280 | MS.gene056509:CDS | 55.0% | |
| GTTAATGCTGGGCCACGAGA+TGG | - | chr8.3:31983631-31983650 | MS.gene056509:intron | 55.0% | |
| TCCCCAAGATCCTCGTTCCT+TGG | + | chr8.3:31984333-31984352 | None:intergenic | 55.0% | |
| TCCGGCAGTTAACCCCGAAT+GGG | - | chr8.3:31979499-31979518 | MS.gene056509:intron | 55.0% | |
| TCCGTGCATTGCAGGAATGG+TGG | + | chr8.3:31983578-31983597 | None:intergenic | 55.0% | |
| TCCTGTGTGGCGATGCACAT+GGG | - | chr8.3:31980255-31980274 | MS.gene056509:CDS | 55.0% | |
| TCTAAGGACCAGGGAGGGTT+GGG | - | chr8.3:31982624-31982643 | MS.gene056509:CDS | 55.0% | |
| TGAACTAGCTCAGCGTGCTG+AGG | - | chr8.3:31983934-31983953 | MS.gene056509:intron | 55.0% | |
| TGATCCGGCTCAGTTCAGCA+CGG | + | chr8.3:31983985-31984004 | None:intergenic | 55.0% | |
| TGCTCATCCATCCATGCCTC+CGG | - | chr8.3:31981103-31981122 | MS.gene056509:intron | 55.0% | |
| TGTGGCGATGCACATGGGAT+TGG | - | chr8.3:31980260-31980279 | MS.gene056509:CDS | 55.0% | |
| TTAAGCTACCCAACCCTCCC+TGG | + | chr8.3:31982635-31982654 | None:intergenic | 55.0% | |
| ! | CCCACATATATGGGTGGGCT+TGG | + | chr8.3:31979666-31979685 | None:intergenic | 55.0% |
| ! | CCCATATATGTGGGGTGTCC+AGG | - | chr8.3:31979672-31979691 | MS.gene056509:CDS | 55.0% |
| ! | CCCGTCTAGTTGCGGCATTT+TGG | + | chr8.3:31982566-31982585 | None:intergenic | 55.0% |
| !! | ACACCAGGGGCATCTGCTAA+TGG | - | chr8.3:31981553-31981572 | MS.gene056509:intron | 55.0% |
| !! | CCCCGAATGGGCTAACTATC+AGG | - | chr8.3:31979511-31979530 | MS.gene056509:intron | 55.0% |
| ACCTGTGACGTAGCAGCTGG+AGG | + | chr8.3:31979368-31979387 | None:intergenic | 60.0% | |
| CACATGGGATTGGGAGTGGC+AGG | - | chr8.3:31980270-31980289 | MS.gene056509:CDS | 60.0% | |
| CATGTGCATCGCCACACAGG+AGG | + | chr8.3:31980256-31980275 | None:intergenic | 60.0% | |
| CCAGGCAGCAGTGAAGCTGA+TGG | - | chr8.3:31981430-31981449 | MS.gene056509:intron | 60.0% | |
| CCAGGGTTCAAGTCCTGGCA+AGG | - | chr8.3:31982688-31982707 | MS.gene056509:intron | 60.0% | |
| CCATCAGCTTCACTGCTGCC+TGG | + | chr8.3:31981433-31981452 | None:intergenic | 60.0% | |
| CCTTGCCAGGACTTGAACCC+TGG | + | chr8.3:31982691-31982710 | None:intergenic | 60.0% | |
| CGGGCAGACTGCAATGAAGG+CGG | - | chr8.3:31982582-31982601 | MS.gene056509:CDS | 60.0% | |
| CGGGGAGATACCAAGGAACG+AGG | - | chr8.3:31984320-31984339 | MS.gene056509:intron | 60.0% | |
| CTCCGGCAGTTAACCCCGAA+TGG | - | chr8.3:31979498-31979517 | MS.gene056509:intron | 60.0% | |
| CTCCTGTGTGGCGATGCACA+TGG | - | chr8.3:31980254-31980273 | MS.gene056509:CDS | 60.0% | |
| CTCTCCGTGCTGAACTGAGC+CGG | - | chr8.3:31983978-31983997 | MS.gene056509:intron | 60.0% | |
| GAGGTCCAGGGTTCAAGTCC+TGG | - | chr8.3:31982683-31982702 | MS.gene056509:intron | 60.0% | |
| GCAGTCTGCCCGTCTAGTTG+CGG | + | chr8.3:31982574-31982593 | None:intergenic | 60.0% | |
| GCCCATTCGGGGTTAACTGC+CGG | + | chr8.3:31979503-31979522 | None:intergenic | 60.0% | |
| GCTCAGTTCAGCACGGAGAG+AGG | + | chr8.3:31983978-31983997 | None:intergenic | 60.0% | |
| GGGCAGACTGCAATGAAGGC+GGG | - | chr8.3:31982583-31982602 | MS.gene056509:CDS | 60.0% | |
| GGGGTTAACTGCCGGAGTAC+CGG | + | chr8.3:31979495-31979514 | None:intergenic | 60.0% | |
| TCCCATGTGCATCGCCACAC+AGG | + | chr8.3:31980259-31980278 | None:intergenic | 60.0% | |
| ! | AGGATGTGGTGGGGTGCCAT+AGG | + | chr8.3:31981051-31981070 | None:intergenic | 60.0% |
| ! | GGATGTGGTGGGGTGCCATA+GGG | + | chr8.3:31981050-31981069 | None:intergenic | 60.0% |
| !! | GTAGCAGCTGGAGGCGTCTT+AGG | + | chr8.3:31979359-31979378 | None:intergenic | 60.0% |
| GCCTCCAGCTGCTACGTCAC+AGG | - | chr8.3:31979364-31979383 | MS.gene056509:CDS | 65.0% | |
| ! | TGTGGTGGGGTGCCATAGGG+AGG | + | chr8.3:31981047-31981066 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 31979314 | 31984392 | 31979314 | ID=MS.gene056509 |
| chr8.3 | mRNA | 31979314 | 31984392 | 31979314 | ID=MS.gene056509.t1;Parent=MS.gene056509 |
| chr8.3 | exon | 31984321 | 31984392 | 31984321 | ID=MS.gene056509.t1.exon1;Parent=MS.gene056509.t1 |
| chr8.3 | CDS | 31984321 | 31984392 | 31984321 | ID=cds.MS.gene056509.t1;Parent=MS.gene056509.t1 |
| chr8.3 | exon | 31984174 | 31984233 | 31984174 | ID=MS.gene056509.t1.exon2;Parent=MS.gene056509.t1 |
| chr8.3 | CDS | 31984174 | 31984233 | 31984174 | ID=cds.MS.gene056509.t1;Parent=MS.gene056509.t1 |
| chr8.3 | exon | 31984013 | 31984087 | 31984013 | ID=MS.gene056509.t1.exon3;Parent=MS.gene056509.t1 |
| chr8.3 | CDS | 31984013 | 31984087 | 31984013 | ID=cds.MS.gene056509.t1;Parent=MS.gene056509.t1 |
| chr8.3 | exon | 31982582 | 31982671 | 31982582 | ID=MS.gene056509.t1.exon4;Parent=MS.gene056509.t1 |
| chr8.3 | CDS | 31982582 | 31982671 | 31982582 | ID=cds.MS.gene056509.t1;Parent=MS.gene056509.t1 |
| chr8.3 | exon | 31982412 | 31982471 | 31982412 | ID=MS.gene056509.t1.exon5;Parent=MS.gene056509.t1 |
| chr8.3 | CDS | 31982412 | 31982471 | 31982412 | ID=cds.MS.gene056509.t1;Parent=MS.gene056509.t1 |
| chr8.3 | exon | 31982116 | 31982285 | 31982116 | ID=MS.gene056509.t1.exon6;Parent=MS.gene056509.t1 |
| chr8.3 | CDS | 31982116 | 31982285 | 31982116 | ID=cds.MS.gene056509.t1;Parent=MS.gene056509.t1 |
| chr8.3 | exon | 31981774 | 31981828 | 31981774 | ID=MS.gene056509.t1.exon7;Parent=MS.gene056509.t1 |
| chr8.3 | CDS | 31981774 | 31981828 | 31981774 | ID=cds.MS.gene056509.t1;Parent=MS.gene056509.t1 |
| chr8.3 | exon | 31980418 | 31980460 | 31980418 | ID=MS.gene056509.t1.exon8;Parent=MS.gene056509.t1 |
| chr8.3 | CDS | 31980418 | 31980460 | 31980418 | ID=cds.MS.gene056509.t1;Parent=MS.gene056509.t1 |
| chr8.3 | exon | 31980028 | 31980311 | 31980028 | ID=MS.gene056509.t1.exon9;Parent=MS.gene056509.t1 |
| chr8.3 | CDS | 31980028 | 31980311 | 31980028 | ID=cds.MS.gene056509.t1;Parent=MS.gene056509.t1 |
| chr8.3 | exon | 31979870 | 31979947 | 31979870 | ID=MS.gene056509.t1.exon10;Parent=MS.gene056509.t1 |
| chr8.3 | CDS | 31979870 | 31979947 | 31979870 | ID=cds.MS.gene056509.t1;Parent=MS.gene056509.t1 |
| chr8.3 | exon | 31979658 | 31979783 | 31979658 | ID=MS.gene056509.t1.exon11;Parent=MS.gene056509.t1 |
| chr8.3 | CDS | 31979658 | 31979783 | 31979658 | ID=cds.MS.gene056509.t1;Parent=MS.gene056509.t1 |
| chr8.3 | exon | 31979314 | 31979394 | 31979314 | ID=MS.gene056509.t1.exon12;Parent=MS.gene056509.t1 |
| chr8.3 | CDS | 31979314 | 31979394 | 31979314 | ID=cds.MS.gene056509.t1;Parent=MS.gene056509.t1 |
| Gene Sequence |
| Protein sequence |
