Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26908.t1 | TKY51141.1 | 78.4 | 208 | 34 | 1 | 1 | 197 | 1 | 208 | 3.90E-85 | 324.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26908.t1 | P32869 | 75.0 | 208 | 40 | 2 | 1 | 197 | 1 | 207 | 3.4e-82 | 305.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26908.t1 | T2DMR3 | 78.8 | 208 | 32 | 2 | 1 | 197 | 1 | 207 | 4.7e-85 | 323.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049320 | MS.gene26908 | 0.801948 | 7.08E-49 | -1.69E-46 |
| MS.gene050581 | MS.gene26908 | 0.836299 | 1.01E-56 | -1.69E-46 |
| MS.gene050767 | MS.gene26908 | 0.8258 | 3.85E-54 | -1.69E-46 |
| MS.gene050770 | MS.gene26908 | 0.822313 | 2.53E-53 | -1.69E-46 |
| MS.gene052271 | MS.gene26908 | 0.858908 | 5.96E-63 | -1.69E-46 |
| MS.gene053213 | MS.gene26908 | 0.808423 | 3.12E-50 | -1.69E-46 |
| MS.gene053286 | MS.gene26908 | 0.804263 | 2.35E-49 | -1.69E-46 |
| MS.gene053322 | MS.gene26908 | 0.812596 | 3.91E-51 | -1.69E-46 |
| MS.gene053813 | MS.gene26908 | 0.832392 | 9.70E-56 | -1.69E-46 |
| MS.gene054376 | MS.gene26908 | 0.807094 | 5.98E-50 | -1.69E-46 |
| MS.gene055499 | MS.gene26908 | 0.810897 | 9.17E-51 | -1.69E-46 |
| MS.gene055647 | MS.gene26908 | 0.847192 | 1.35E-59 | -1.69E-46 |
| MS.gene055722 | MS.gene26908 | 0.801347 | 9.40E-49 | -1.69E-46 |
| MS.gene056374 | MS.gene26908 | 0.821569 | 3.77E-53 | -1.69E-46 |
| MS.gene056657 | MS.gene26908 | 0.803921 | 2.77E-49 | -1.69E-46 |
| MS.gene056942 | MS.gene26908 | 0.860762 | 1.65E-63 | -1.69E-46 |
| MS.gene057416 | MS.gene26908 | 0.800185 | 1.62E-48 | -1.69E-46 |
| MS.gene058903 | MS.gene26908 | 0.820847 | 5.52E-53 | -1.69E-46 |
| MS.gene059711 | MS.gene26908 | 0.813346 | 2.68E-51 | -1.69E-46 |
| MS.gene060356 | MS.gene26908 | 0.847619 | 1.03E-59 | -1.69E-46 |
| MS.gene060482 | MS.gene26908 | 0.807335 | 5.32E-50 | -1.69E-46 |
| MS.gene061134 | MS.gene26908 | 0.822396 | 2.42E-53 | -1.69E-46 |
| MS.gene061200 | MS.gene26908 | 0.842102 | 3.17E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26908.t1 | MTR_1g104630 | 79.899 | 199 | 32 | 3 | 1 | 197 | 1 | 193 | 1.65e-109 | 311 |
| MS.gene26908.t1 | MTR_5g006130 | 70.833 | 216 | 37 | 3 | 1 | 197 | 1 | 209 | 1.18e-102 | 295 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26908.t1 | AT1G03130 | 75.145 | 173 | 30 | 2 | 38 | 197 | 32 | 204 | 2.77e-88 | 258 |
| MS.gene26908.t1 | AT4G02770 | 73.864 | 176 | 30 | 2 | 38 | 197 | 33 | 208 | 5.39e-87 | 255 |
Find 74 sgRNAs with CRISPR-Local
Find 84 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAACTTGGGCTTTGCGTAAA+AGG | 0.172350 | 1.4:+80498279 | None:intergenic |
| CGACCCGGGTTCACTTTCTC+TGG | 0.253150 | 1.4:+80498026 | None:intergenic |
| AAGGGGTTGGTCAGAACTTT+AGG | 0.293589 | 1.4:-80498001 | MS.gene26908:CDS |
| ATTTCAAAGATTTGTTCTTT+TGG | 0.302487 | 1.4:+80498227 | None:intergenic |
| CCTTGCTAACTTGAGAAGAT+TGG | 0.306141 | 1.4:+80498169 | None:intergenic |
| GGTCAGAACTTTAGGTCTAT+TGG | 0.344103 | 1.4:-80497993 | MS.gene26908:CDS |
| AGCCTAAGACTGAGAGGGTT+TGG | 0.354319 | 1.4:+80498428 | None:intergenic |
| AGAGATACGGTCATTAGGTT+TGG | 0.376453 | 1.4:+80498490 | None:intergenic |
| CTCTTCACCCCTCCTCTCTC+TGG | 0.385923 | 1.4:-80498515 | MS.gene26908:CDS |
| AAAGAACAATGTTTGGCTCT+TGG | 0.389124 | 1.4:-80498146 | MS.gene26908:CDS |
| GGTACAGAGATACGGTCATT+AGG | 0.394276 | 1.4:+80498485 | None:intergenic |
| AGCAAGGAAAGAACAATGTT+TGG | 0.394375 | 1.4:-80498153 | MS.gene26908:CDS |
| CTTGCTAACTTGAGAAGATT+GGG | 0.409133 | 1.4:+80498170 | None:intergenic |
| TGGGAAACACTCTATAGAAT+TGG | 0.417334 | 1.4:+80498090 | None:intergenic |
| CCACTGAACTTAACCTCTAT+AGG | 0.417689 | 1.4:+80497957 | None:intergenic |
| GAGATACGGTCATTAGGTTT+GGG | 0.426468 | 1.4:+80498491 | None:intergenic |
| TCTGGGTACACACCATCCTT+AGG | 0.434810 | 1.4:+80498044 | None:intergenic |
| TGACCAACCCCTTGGCGACC+CGG | 0.439253 | 1.4:+80498011 | None:intergenic |
| TCTATAGAGTGTTTCCCAAT+GGG | 0.441504 | 1.4:-80498085 | MS.gene26908:CDS |
| AGAGAGAGGAGGGGTGAAGA+GGG | 0.442080 | 1.4:+80498517 | None:intergenic |
| ATCCAAACCCTCTCAGTCTT+AGG | 0.461548 | 1.4:-80498430 | MS.gene26908:CDS |
| AAGTATTGAACTTCCCCATT+GGG | 0.462594 | 1.4:+80498071 | None:intergenic |
| TACATAAAATTCCTCAACTT+GGG | 0.465412 | 1.4:+80498265 | None:intergenic |
| TAAGAATGTTAGTCCTATAG+AGG | 0.473752 | 1.4:-80497970 | MS.gene26908:CDS |
| GTTTGGGACCAGAGAGAGGA+GGG | 0.477785 | 1.4:+80498507 | None:intergenic |
| CAGAGAGAGGAGGGGTGAAG+AGG | 0.479426 | 1.4:+80498516 | None:intergenic |
| CAAATCTTTGAAATGCCTAC+TGG | 0.482126 | 1.4:-80498218 | MS.gene26908:CDS |
| ATGTTTGTGTCTTACTCAGG+TGG | 0.482467 | 1.4:+80498335 | None:intergenic |
| GACCCGGGTTCACTTTCTCT+GGG | 0.486087 | 1.4:+80498027 | None:intergenic |
| GAGAGGAGGGGTGAAGAGGG+AGG | 0.499448 | 1.4:+80498520 | None:intergenic |
| AAAGTGAACCCGGGTCGCCA+AGG | 0.500800 | 1.4:-80498020 | MS.gene26908:CDS |
| TTACATAAAATTCCTCAACT+TGG | 0.508639 | 1.4:+80498264 | None:intergenic |
| TCAGGTGGGGTGAAGCCAAT+TGG | 0.510396 | 1.4:+80498350 | None:intergenic |
| GAAGCAACAGAGGCACCAAT+TGG | 0.510520 | 1.4:-80498365 | MS.gene26908:CDS |
| AACCCGGGTCGCCAAGGGGT+TGG | 0.516971 | 1.4:-80498014 | MS.gene26908:CDS |
| GACCAACCCCTTGGCGACCC+GGG | 0.524362 | 1.4:+80498012 | None:intergenic |
| AATGTGGGTGATTGTTTCCA+TGG | 0.524862 | 1.4:+80498464 | None:intergenic |
| TTCTATAGAGTGTTTCCCAA+TGG | 0.534519 | 1.4:-80498086 | MS.gene26908:CDS |
| CAAGTATTGAACTTCCCCAT+TGG | 0.539423 | 1.4:+80498070 | None:intergenic |
| TGTTTGTGTCTTACTCAGGT+GGG | 0.540009 | 1.4:+80498336 | None:intergenic |
| TGGATTGGTGAAGGACAATG+TGG | 0.545639 | 1.4:+80498448 | None:intergenic |
| TGGCTCTTGGAACTACATTG+AGG | 0.549525 | 1.4:-80498133 | MS.gene26908:CDS |
| AAGTGAACCCGGGTCGCCAA+GGG | 0.549528 | 1.4:-80498019 | MS.gene26908:CDS |
| GTTTCCATGGTACAGAGATA+CGG | 0.551001 | 1.4:+80498477 | None:intergenic |
| GGTTTGGGACCAGAGAGAGG+AGG | 0.559759 | 1.4:+80498506 | None:intergenic |
| ATTGGGACCTTCCCTCATGA+TGG | 0.564788 | 1.4:+80498187 | None:intergenic |
| GTACCCAGAGAAAGTGAACC+CGG | 0.564935 | 1.4:-80498030 | MS.gene26908:CDS |
| GAGAGGGTTTGGATTGGTGA+AGG | 0.565450 | 1.4:+80498439 | None:intergenic |
| CAAAACAACAACTGTTACTG+AGG | 0.567600 | 1.4:-80498387 | MS.gene26908:CDS |
| TAAAGTTCTGACCAACCCCT+TGG | 0.570035 | 1.4:+80498003 | None:intergenic |
| AGTTCAATACTTGCATCCTA+AGG | 0.578655 | 1.4:-80498060 | MS.gene26908:CDS |
| GTTTGTGTCTTACTCAGGTG+GGG | 0.582440 | 1.4:+80498337 | None:intergenic |
| CCAATCTTCTCAAGTTAGCA+AGG | 0.583877 | 1.4:-80498169 | MS.gene26908:CDS |
| CAATACTTGCATCCTAAGGA+TGG | 0.585635 | 1.4:-80498056 | MS.gene26908:CDS |
| AAGACTGAGAGGGTTTGGAT+TGG | 0.585730 | 1.4:+80498433 | None:intergenic |
| CTGGTGGTGCAGCCATCATG+AGG | 0.591206 | 1.4:-80498199 | MS.gene26908:CDS |
| GAGGGAGGTTTGAGTTGCCG+TGG | 0.592804 | 1.4:+80498535 | None:intergenic |
| CCTATAGAGGTTAAGTTCAG+TGG | 0.595489 | 1.4:-80497957 | MS.gene26908:CDS |
| AAACCACCTCACAATGGCCA+CGG | 0.601200 | 1.4:-80498552 | None:intergenic |
| TTAGGTTTGGGACCAGAGAG+AGG | 0.606251 | 1.4:+80498503 | None:intergenic |
| TTTGGGACCAGAGAGAGGAG+GGG | 0.614499 | 1.4:+80498508 | None:intergenic |
| GGTGCAGCCATCATGAGGGA+AGG | 0.635464 | 1.4:-80498194 | MS.gene26908:CDS |
| TTGTGAGCCTAAGACTGAGA+GGG | 0.636675 | 1.4:+80498423 | None:intergenic |
| ATGATGGCTGCACCACCAGT+AGG | 0.647307 | 1.4:+80498203 | None:intergenic |
| TTTACGCAAAGCCCAAGTTG+AGG | 0.649694 | 1.4:-80498276 | MS.gene26908:CDS |
| CTATAGAGTGTTTCCCAATG+GGG | 0.656977 | 1.4:-80498084 | MS.gene26908:CDS |
| AGTGAACCCGGGTCGCCAAG+GGG | 0.658596 | 1.4:-80498018 | MS.gene26908:CDS |
| ATCTTTGAAATGCCTACTGG+TGG | 0.664160 | 1.4:-80498215 | MS.gene26908:CDS |
| TGTTACTGAGGAAGCAACAG+AGG | 0.671184 | 1.4:-80498375 | MS.gene26908:CDS |
| TGGTGGTGCAGCCATCATGA+GGG | 0.675901 | 1.4:-80498198 | MS.gene26908:CDS |
| ATTGTGAGCCTAAGACTGAG+AGG | 0.683773 | 1.4:+80498422 | None:intergenic |
| TACCCAGAGAAAGTGAACCC+GGG | 0.686978 | 1.4:-80498029 | MS.gene26908:CDS |
| ATGACCGTATCTCTGTACCA+TGG | 0.695290 | 1.4:-80498481 | MS.gene26908:CDS |
| GGATTGGTGAAGGACAATGT+GGG | 0.717553 | 1.4:+80498449 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTCAAAGATTTGTTCTTT+TGG | + | chr1.4:80498250-80498269 | None:intergenic | 20.0% |
| ! | TACATAAAATTCCTCAACTT+GGG | + | chr1.4:80498212-80498231 | None:intergenic | 25.0% |
| ! | TTACATAAAATTCCTCAACT+TGG | + | chr1.4:80498213-80498232 | None:intergenic | 25.0% |
| !! | AGGAATTTTATGTAATCACA+TGG | - | chr1.4:80498218-80498237 | MS.gene26908:CDS | 25.0% |
| !! | GGAATTTTATGTAATCACAT+GGG | - | chr1.4:80498219-80498238 | MS.gene26908:CDS | 25.0% |
| TAAGAATGTTAGTCCTATAG+AGG | - | chr1.4:80498504-80498523 | MS.gene26908:CDS | 30.0% | |
| AGCAAGGAAAGAACAATGTT+TGG | - | chr1.4:80498321-80498340 | MS.gene26908:intron | 35.0% | |
| AGTTCAATACTTGCATCCTA+AGG | - | chr1.4:80498414-80498433 | MS.gene26908:CDS | 35.0% | |
| CAAAACAACAACTGTTACTG+AGG | - | chr1.4:80498087-80498106 | MS.gene26908:CDS | 35.0% | |
| CTTGCTAACTTGAGAAGATT+GGG | + | chr1.4:80498307-80498326 | None:intergenic | 35.0% | |
| TGGGAAACACTCTATAGAAT+TGG | + | chr1.4:80498387-80498406 | None:intergenic | 35.0% | |
| ! | TCTATAGAGTGTTTCCCAAT+GGG | - | chr1.4:80498389-80498408 | MS.gene26908:CDS | 35.0% |
| ! | TTCTATAGAGTGTTTCCCAA+TGG | - | chr1.4:80498388-80498407 | MS.gene26908:CDS | 35.0% |
| !! | AAAGAACAATGTTTGGCTCT+TGG | - | chr1.4:80498328-80498347 | MS.gene26908:intron | 35.0% |
| !! | AAGTATTGAACTTCCCCATT+GGG | + | chr1.4:80498406-80498425 | None:intergenic | 35.0% |
| !! | CAAATCTTTGAAATGCCTAC+TGG | - | chr1.4:80498256-80498275 | MS.gene26908:CDS | 35.0% |
| AATGTGGGTGATTGTTTCCA+TGG | + | chr1.4:80498013-80498032 | None:intergenic | 40.0% | |
| AGAGATACGGTCATTAGGTT+TGG | + | chr1.4:80497987-80498006 | None:intergenic | 40.0% | |
| AGTACTGCCACTGAAAATTG+GGG | + | chr1.4:80498170-80498189 | None:intergenic | 40.0% | |
| ATGTTTGTGTCTTACTCAGG+TGG | + | chr1.4:80498142-80498161 | None:intergenic | 40.0% | |
| CAATACTTGCATCCTAAGGA+TGG | - | chr1.4:80498418-80498437 | MS.gene26908:CDS | 40.0% | |
| CAGTACTGCCACTGAAAATT+GGG | + | chr1.4:80498171-80498190 | None:intergenic | 40.0% | |
| CCAATCTTCTCAAGTTAGCA+AGG | - | chr1.4:80498305-80498324 | MS.gene26908:intron | 40.0% | |
| CCACTGAACTTAACCTCTAT+AGG | + | chr1.4:80498520-80498539 | None:intergenic | 40.0% | |
| CCTATAGAGGTTAAGTTCAG+TGG | - | chr1.4:80498517-80498536 | MS.gene26908:CDS | 40.0% | |
| CCTTGCTAACTTGAGAAGAT+TGG | + | chr1.4:80498308-80498327 | None:intergenic | 40.0% | |
| GAGATACGGTCATTAGGTTT+GGG | + | chr1.4:80497986-80498005 | None:intergenic | 40.0% | |
| GGAATGTTTGTGTCTTACTC+AGG | + | chr1.4:80498145-80498164 | None:intergenic | 40.0% | |
| GGTCAGAACTTTAGGTCTAT+TGG | - | chr1.4:80498481-80498500 | MS.gene26908:CDS | 40.0% | |
| GTTTCCATGGTACAGAGATA+CGG | + | chr1.4:80498000-80498019 | None:intergenic | 40.0% | |
| TGTTTGTGTCTTACTCAGGT+GGG | + | chr1.4:80498141-80498160 | None:intergenic | 40.0% | |
| ! | CTATAGAGTGTTTCCCAATG+GGG | - | chr1.4:80498390-80498409 | MS.gene26908:CDS | 40.0% |
| !! | ATCTTTGAAATGCCTACTGG+TGG | - | chr1.4:80498259-80498278 | MS.gene26908:CDS | 40.0% |
| !! | CAAGTATTGAACTTCCCCAT+TGG | + | chr1.4:80498407-80498426 | None:intergenic | 40.0% |
| AAGACTGAGAGGGTTTGGAT+TGG | + | chr1.4:80498044-80498063 | None:intergenic | 45.0% | |
| ATCCAAACCCTCTCAGTCTT+AGG | - | chr1.4:80498044-80498063 | MS.gene26908:CDS | 45.0% | |
| ATGACCGTATCTCTGTACCA+TGG | - | chr1.4:80497993-80498012 | MS.gene26908:CDS | 45.0% | |
| ATTGTGAGCCTAAGACTGAG+AGG | + | chr1.4:80498055-80498074 | None:intergenic | 45.0% | |
| CAACTTGGGCTTTGCGTAAA+AGG | + | chr1.4:80498198-80498217 | None:intergenic | 45.0% | |
| CCAGTACTGCCACTGAAAAT+TGG | + | chr1.4:80498172-80498191 | None:intergenic | 45.0% | |
| GGTACAGAGATACGGTCATT+AGG | + | chr1.4:80497992-80498011 | None:intergenic | 45.0% | |
| GTTTGTGTCTTACTCAGGTG+GGG | + | chr1.4:80498140-80498159 | None:intergenic | 45.0% | |
| TGGCTCTTGGAACTACATTG+AGG | - | chr1.4:80498341-80498360 | MS.gene26908:intron | 45.0% | |
| TGTTACTGAGGAAGCAACAG+AGG | - | chr1.4:80498099-80498118 | MS.gene26908:CDS | 45.0% | |
| TTGTGAGCCTAAGACTGAGA+GGG | + | chr1.4:80498054-80498073 | None:intergenic | 45.0% | |
| TTTACGCAAAGCCCAAGTTG+AGG | - | chr1.4:80498198-80498217 | MS.gene26908:CDS | 45.0% | |
| ! | ATTCCCTCCCCAATTTTCAG+TGG | - | chr1.4:80498160-80498179 | MS.gene26908:CDS | 45.0% |
| ! | CCAATTTTCAGTGGCAGTAC+TGG | - | chr1.4:80498169-80498188 | MS.gene26908:CDS | 45.0% |
| ! | GGATTGGTGAAGGACAATGT+GGG | + | chr1.4:80498028-80498047 | None:intergenic | 45.0% |
| ! | TAAAGTTCTGACCAACCCCT+TGG | + | chr1.4:80498474-80498493 | None:intergenic | 45.0% |
| !! | AAGGGGTTGGTCAGAACTTT+AGG | - | chr1.4:80498473-80498492 | MS.gene26908:CDS | 45.0% |
| !! | ATTTTCAGTGGCAGTACTGG+AGG | - | chr1.4:80498172-80498191 | MS.gene26908:CDS | 45.0% |
| !! | TGGATTGGTGAAGGACAATG+TGG | + | chr1.4:80498029-80498048 | None:intergenic | 45.0% |
| ACTGCCACTGAAAATTGGGG+AGG | + | chr1.4:80498167-80498186 | None:intergenic | 50.0% | |
| AGCCTAAGACTGAGAGGGTT+TGG | + | chr1.4:80498049-80498068 | None:intergenic | 50.0% | |
| ATTGGGACCTTCCCTCATGA+TGG | + | chr1.4:80498290-80498309 | None:intergenic | 50.0% | |
| CTGCCACTGAAAATTGGGGA+GGG | + | chr1.4:80498166-80498185 | None:intergenic | 50.0% | |
| GTACCCAGAGAAAGTGAACC+CGG | - | chr1.4:80498444-80498463 | MS.gene26908:CDS | 50.0% | |
| TACCCAGAGAAAGTGAACCC+GGG | - | chr1.4:80498445-80498464 | MS.gene26908:CDS | 50.0% | |
| TCTGGGTACACACCATCCTT+AGG | + | chr1.4:80498433-80498452 | None:intergenic | 50.0% | |
| ! | TTAGGTTTGGGACCAGAGAG+AGG | + | chr1.4:80497974-80497993 | None:intergenic | 50.0% |
| !! | GAAGCAACAGAGGCACCAAT+TGG | - | chr1.4:80498109-80498128 | MS.gene26908:CDS | 50.0% |
| !! | GAGAGGGTTTGGATTGGTGA+AGG | + | chr1.4:80498038-80498057 | None:intergenic | 50.0% |
| AGAGAGAGGAGGGGTGAAGA+GGG | + | chr1.4:80497960-80497979 | None:intergenic | 55.0% | |
| ATGATGGCTGCACCACCAGT+AGG | + | chr1.4:80498274-80498293 | None:intergenic | 55.0% | |
| GACCCGGGTTCACTTTCTCT+GGG | + | chr1.4:80498450-80498469 | None:intergenic | 55.0% | |
| TCAGGTGGGGTGAAGCCAAT+TGG | + | chr1.4:80498127-80498146 | None:intergenic | 55.0% | |
| ! | GTTTGGGACCAGAGAGAGGA+GGG | + | chr1.4:80497970-80497989 | None:intergenic | 55.0% |
| ! | TGGTGGTGCAGCCATCATGA+GGG | - | chr1.4:80498276-80498295 | MS.gene26908:CDS | 55.0% |
| ! | TTTGGGACCAGAGAGAGGAG+GGG | + | chr1.4:80497969-80497988 | None:intergenic | 55.0% |
| AAAGTGAACCCGGGTCGCCA+AGG | - | chr1.4:80498454-80498473 | MS.gene26908:CDS | 60.0% | |
| AAGTGAACCCGGGTCGCCAA+GGG | - | chr1.4:80498455-80498474 | MS.gene26908:CDS | 60.0% | |
| CAGAGAGAGGAGGGGTGAAG+AGG | + | chr1.4:80497961-80497980 | None:intergenic | 60.0% | |
| CGACCCGGGTTCACTTTCTC+TGG | + | chr1.4:80498451-80498470 | None:intergenic | 60.0% | |
| CTCTTCACCCCTCCTCTCTC+TGG | - | chr1.4:80497959-80497978 | MS.gene26908:CDS | 60.0% | |
| GGTGCAGCCATCATGAGGGA+AGG | - | chr1.4:80498280-80498299 | MS.gene26908:CDS | 60.0% | |
| ! | CTGGTGGTGCAGCCATCATG+AGG | - | chr1.4:80498275-80498294 | MS.gene26908:CDS | 60.0% |
| ! | GGTTTGGGACCAGAGAGAGG+AGG | + | chr1.4:80497971-80497990 | None:intergenic | 60.0% |
| !! | GAGGGAGGTTTGAGTTGCCG+TGG | + | chr1.4:80497942-80497961 | None:intergenic | 60.0% |
| AGTGAACCCGGGTCGCCAAG+GGG | - | chr1.4:80498456-80498475 | MS.gene26908:CDS | 65.0% | |
| GAGAGGAGGGGTGAAGAGGG+AGG | + | chr1.4:80497957-80497976 | None:intergenic | 65.0% | |
| TGACCAACCCCTTGGCGACC+CGG | + | chr1.4:80498466-80498485 | None:intergenic | 65.0% | |
| AACCCGGGTCGCCAAGGGGT+TGG | - | chr1.4:80498460-80498479 | MS.gene26908:CDS | 70.0% | |
| GACCAACCCCTTGGCGACCC+GGG | + | chr1.4:80498465-80498484 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 80497935 | 80498561 | 80497935 | ID=MS.gene26908 |
| chr1.4 | mRNA | 80497935 | 80498561 | 80497935 | ID=MS.gene26908.t1;Parent=MS.gene26908 |
| chr1.4 | exon | 80498350 | 80498561 | 80498350 | ID=MS.gene26908.t1.exon1;Parent=MS.gene26908.t1 |
| chr1.4 | CDS | 80498350 | 80498561 | 80498350 | ID=cds.MS.gene26908.t1;Parent=MS.gene26908.t1 |
| chr1.4 | exon | 80497935 | 80498316 | 80497935 | ID=MS.gene26908.t1.exon2;Parent=MS.gene26908.t1 |
| chr1.4 | CDS | 80497935 | 80498316 | 80497935 | ID=cds.MS.gene26908.t1;Parent=MS.gene26908.t1 |
| Gene Sequence |
| Protein sequence |
