Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene28023.t1 | XP_013446746.1 | 98.5 | 390 | 6 | 0 | 1 | 390 | 1 | 390 | 7.60E-234 | 819.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene28023.t1 | A0A072TV77 | 98.5 | 390 | 6 | 0 | 1 | 390 | 1 | 390 | 5.4e-234 | 819.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene04919 | MS.gene28023 | 0.810164 | 1.32E-50 | -1.69E-46 |
MS.gene04920 | MS.gene28023 | 0.814203 | 1.74E-51 | -1.69E-46 |
MS.gene049283 | MS.gene28023 | 0.845829 | 3.18E-59 | -1.69E-46 |
MS.gene049499 | MS.gene28023 | 0.80156 | 8.50E-49 | -1.69E-46 |
MS.gene049983 | MS.gene28023 | 0.848978 | 4.34E-60 | -1.69E-46 |
MS.gene050213 | MS.gene28023 | 0.82261 | 2.16E-53 | -1.69E-46 |
MS.gene050359 | MS.gene28023 | 0.806232 | 9.09E-50 | -1.69E-46 |
MS.gene050646 | MS.gene28023 | 0.803178 | 3.95E-49 | -1.69E-46 |
MS.gene050654 | MS.gene28023 | 0.838319 | 3.09E-57 | -1.69E-46 |
MS.gene050931 | MS.gene28023 | 0.808716 | 2.70E-50 | -1.69E-46 |
MS.gene051226 | MS.gene28023 | 0.800775 | 1.23E-48 | -1.69E-46 |
MS.gene052016 | MS.gene28023 | 0.802444 | 5.59E-49 | -1.69E-46 |
MS.gene052118 | MS.gene28023 | 0.817986 | 2.48E-52 | -1.69E-46 |
MS.gene052533 | MS.gene28023 | 0.800993 | 1.11E-48 | -1.69E-46 |
MS.gene053726 | MS.gene28023 | 0.82915 | 6.05E-55 | -1.69E-46 |
MS.gene053931 | MS.gene28023 | 0.800269 | 1.56E-48 | -1.69E-46 |
MS.gene054892 | MS.gene28023 | 0.85896 | 5.75E-63 | -1.69E-46 |
MS.gene054893 | MS.gene28023 | 0.86491 | 8.66E-65 | -1.69E-46 |
MS.gene054957 | MS.gene28023 | 0.812443 | 4.23E-51 | -1.69E-46 |
MS.gene055513 | MS.gene28023 | 0.824082 | 9.79E-54 | -1.69E-46 |
MS.gene055864 | MS.gene28023 | 0.808531 | 2.96E-50 | -1.69E-46 |
MS.gene056699 | MS.gene28023 | 0.802998 | 4.30E-49 | -1.69E-46 |
MS.gene057155 | MS.gene28023 | 0.803046 | 4.20E-49 | -1.69E-46 |
MS.gene057174 | MS.gene28023 | 0.819185 | 1.33E-52 | -1.69E-46 |
MS.gene057622 | MS.gene28023 | 0.839346 | 1.67E-57 | -1.69E-46 |
MS.gene058095 | MS.gene28023 | 0.840605 | 7.86E-58 | -1.69E-46 |
MS.gene058292 | MS.gene28023 | 0.80485 | 1.77E-49 | -1.69E-46 |
MS.gene058429 | MS.gene28023 | 0.809362 | 1.96E-50 | -1.69E-46 |
MS.gene059146 | MS.gene28023 | 0.813512 | 2.47E-51 | -1.69E-46 |
MS.gene05952 | MS.gene28023 | 0.812351 | 4.43E-51 | -1.69E-46 |
MS.gene060522 | MS.gene28023 | 0.832862 | 7.42E-56 | -1.69E-46 |
MS.gene060933 | MS.gene28023 | 0.843239 | 1.58E-58 | -1.69E-46 |
MS.gene060937 | MS.gene28023 | 0.821187 | 4.61E-53 | -1.69E-46 |
MS.gene061100 | MS.gene28023 | 0.813244 | 2.82E-51 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene28023.t1 | MTR_8g089820 | 98.462 | 390 | 6 | 0 | 1 | 390 | 1 | 390 | 0.0 | 806 |
MS.gene28023.t1 | MTR_3g086610 | 72.265 | 393 | 104 | 2 | 2 | 389 | 7 | 399 | 0.0 | 595 |
MS.gene28023.t1 | MTR_8g089815 | 71.762 | 386 | 104 | 2 | 2 | 383 | 7 | 391 | 0.0 | 587 |
MS.gene28023.t1 | MTR_3g086610 | 73.876 | 356 | 89 | 1 | 2 | 353 | 7 | 362 | 0.0 | 554 |
MS.gene28023.t1 | MTR_7g033300 | 63.325 | 379 | 128 | 2 | 12 | 379 | 1 | 379 | 0.0 | 511 |
MS.gene28023.t1 | MTR_4g058800 | 65.928 | 361 | 116 | 2 | 24 | 377 | 5 | 365 | 1.75e-178 | 501 |
MS.gene28023.t1 | MTR_2g094650 | 60.377 | 371 | 146 | 1 | 6 | 375 | 10 | 380 | 1.49e-171 | 484 |
MS.gene28023.t1 | MTR_2g094650 | 60.215 | 372 | 146 | 2 | 6 | 375 | 10 | 381 | 4.37e-170 | 481 |
MS.gene28023.t1 | MTR_1g078290 | 47.687 | 281 | 134 | 6 | 89 | 356 | 75 | 355 | 3.43e-83 | 258 |
MS.gene28023.t1 | MTR_2g012570 | 47.794 | 272 | 131 | 6 | 87 | 347 | 46 | 317 | 3.49e-83 | 257 |
MS.gene28023.t1 | MTR_2g012570 | 47.794 | 272 | 131 | 6 | 87 | 347 | 72 | 343 | 4.23e-83 | 258 |
MS.gene28023.t1 | MTR_1g078290 | 45.724 | 304 | 149 | 7 | 89 | 379 | 75 | 375 | 1.04e-82 | 258 |
MS.gene28023.t1 | MTR_1g078290 | 47.687 | 281 | 134 | 6 | 89 | 356 | 75 | 355 | 1.60e-82 | 258 |
MS.gene28023.t1 | MTR_2g012570 | 47.794 | 272 | 131 | 6 | 87 | 347 | 46 | 317 | 2.93e-82 | 256 |
MS.gene28023.t1 | MTR_2g012570 | 47.794 | 272 | 131 | 6 | 87 | 347 | 72 | 343 | 3.11e-82 | 257 |
MS.gene28023.t1 | MTR_2g005330 | 47.101 | 276 | 138 | 6 | 71 | 338 | 58 | 333 | 2.67e-81 | 253 |
MS.gene28023.t1 | MTR_2g005330 | 44.898 | 294 | 154 | 6 | 71 | 356 | 58 | 351 | 8.56e-81 | 253 |
MS.gene28023.t1 | MTR_4g090465 | 49.801 | 251 | 119 | 5 | 95 | 338 | 430 | 680 | 3.23e-78 | 255 |
MS.gene28023.t1 | MTR_1g078290 | 49.174 | 242 | 111 | 5 | 89 | 318 | 75 | 316 | 5.66e-75 | 236 |
MS.gene28023.t1 | MTR_2g005330 | 52.880 | 191 | 85 | 4 | 153 | 338 | 1 | 191 | 6.26e-66 | 210 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene28023.t1 | AT1G67850 | 66.230 | 382 | 122 | 2 | 10 | 384 | 15 | 396 | 0.0 | 533 |
MS.gene28023.t1 | AT1G67850 | 66.230 | 382 | 122 | 2 | 10 | 384 | 15 | 396 | 0.0 | 533 |
MS.gene28023.t1 | AT1G67850 | 66.230 | 382 | 122 | 2 | 10 | 384 | 15 | 396 | 0.0 | 533 |
MS.gene28023.t1 | AT1G67850 | 66.230 | 382 | 122 | 2 | 10 | 384 | 15 | 396 | 0.0 | 533 |
MS.gene28023.t1 | AT1G67850 | 66.230 | 382 | 122 | 2 | 10 | 384 | 15 | 396 | 0.0 | 533 |
MS.gene28023.t1 | AT1G67850 | 66.230 | 382 | 122 | 2 | 10 | 384 | 15 | 396 | 0.0 | 533 |
MS.gene28023.t1 | AT1G67850 | 65.445 | 382 | 121 | 2 | 12 | 384 | 1 | 380 | 0.0 | 533 |
MS.gene28023.t1 | AT1G13000 | 64.491 | 383 | 121 | 3 | 6 | 377 | 15 | 393 | 0.0 | 533 |
MS.gene28023.t1 | AT1G13000 | 64.491 | 383 | 121 | 3 | 6 | 377 | 15 | 393 | 0.0 | 533 |
MS.gene28023.t1 | AT1G13000 | 64.491 | 383 | 121 | 3 | 6 | 377 | 15 | 393 | 0.0 | 533 |
MS.gene28023.t1 | AT1G13000 | 64.491 | 383 | 121 | 3 | 6 | 377 | 15 | 393 | 0.0 | 533 |
MS.gene28023.t1 | AT3G27470 | 63.427 | 391 | 123 | 4 | 6 | 380 | 2 | 388 | 0.0 | 527 |
MS.gene28023.t1 | AT3G27470 | 63.427 | 391 | 123 | 4 | 6 | 380 | 2 | 388 | 0.0 | 527 |
MS.gene28023.t1 | AT3G27470 | 63.427 | 391 | 123 | 4 | 6 | 380 | 2 | 388 | 0.0 | 527 |
MS.gene28023.t1 | AT3G27470 | 63.427 | 391 | 123 | 4 | 6 | 380 | 2 | 388 | 0.0 | 527 |
MS.gene28023.t1 | AT3G27470 | 63.427 | 391 | 123 | 4 | 6 | 380 | 2 | 388 | 0.0 | 526 |
MS.gene28023.t1 | AT3G26440 | 65.067 | 375 | 127 | 2 | 4 | 377 | 36 | 407 | 0.0 | 526 |
MS.gene28023.t1 | AT3G26440 | 65.067 | 375 | 127 | 2 | 4 | 377 | 36 | 407 | 0.0 | 525 |
MS.gene28023.t1 | AT3G26440 | 65.067 | 375 | 127 | 2 | 4 | 377 | 13 | 384 | 0.0 | 524 |
MS.gene28023.t1 | AT3G26440 | 65.067 | 375 | 127 | 2 | 4 | 377 | 13 | 384 | 0.0 | 524 |
MS.gene28023.t1 | AT2G28310 | 64.706 | 374 | 119 | 2 | 2 | 375 | 7 | 367 | 0.0 | 520 |
MS.gene28023.t1 | AT2G28310 | 64.706 | 374 | 119 | 2 | 2 | 375 | 7 | 367 | 0.0 | 520 |
MS.gene28023.t1 | AT2G28310 | 64.706 | 374 | 119 | 2 | 2 | 375 | 7 | 367 | 0.0 | 520 |
MS.gene28023.t1 | AT1G08040 | 63.684 | 380 | 132 | 2 | 2 | 381 | 7 | 380 | 0.0 | 512 |
MS.gene28023.t1 | AT1G08040 | 63.684 | 380 | 132 | 2 | 2 | 381 | 7 | 380 | 0.0 | 512 |
MS.gene28023.t1 | AT1G08040 | 63.684 | 380 | 132 | 2 | 2 | 381 | 7 | 380 | 0.0 | 512 |
MS.gene28023.t1 | AT1G08040 | 63.421 | 380 | 133 | 2 | 2 | 381 | 3 | 376 | 0.0 | 512 |
MS.gene28023.t1 | AT3G26440 | 65.722 | 353 | 117 | 2 | 4 | 355 | 13 | 362 | 2.68e-176 | 496 |
MS.gene28023.t1 | AT3G26440 | 62.667 | 375 | 112 | 3 | 4 | 377 | 13 | 360 | 4.88e-176 | 495 |
MS.gene28023.t1 | AT1G24570 | 61.126 | 373 | 131 | 4 | 12 | 382 | 19 | 379 | 9.55e-170 | 479 |
MS.gene28023.t1 | AT1G24570 | 59.249 | 373 | 131 | 4 | 12 | 382 | 19 | 372 | 7.26e-162 | 459 |
MS.gene28023.t1 | AT1G13000 | 64.506 | 324 | 100 | 3 | 6 | 318 | 15 | 334 | 2.42e-156 | 444 |
MS.gene28023.t1 | AT4G12840 | 51.362 | 257 | 115 | 6 | 89 | 338 | 76 | 329 | 9.24e-89 | 274 |
MS.gene28023.t1 | AT4G12840 | 51.362 | 257 | 115 | 6 | 89 | 338 | 76 | 329 | 1.07e-88 | 273 |
MS.gene28023.t1 | AT4G18530 | 48.659 | 261 | 120 | 7 | 89 | 338 | 66 | 323 | 5.79e-82 | 256 |
MS.gene28023.t1 | AT4G12840 | 51.261 | 238 | 106 | 6 | 108 | 338 | 1 | 235 | 6.77e-82 | 253 |
MS.gene28023.t1 | AT4G18530 | 48.659 | 261 | 120 | 7 | 89 | 338 | 71 | 328 | 7.00e-82 | 256 |
MS.gene28023.t1 | AT1G61240 | 46.886 | 273 | 136 | 5 | 95 | 358 | 15 | 287 | 1.02e-81 | 254 |
MS.gene28023.t1 | AT1G61240 | 46.886 | 273 | 136 | 5 | 95 | 358 | 82 | 354 | 7.79e-81 | 254 |
MS.gene28023.t1 | AT1G61240 | 46.886 | 273 | 136 | 5 | 95 | 358 | 82 | 354 | 7.79e-81 | 254 |
MS.gene28023.t1 | AT1G61240 | 46.886 | 273 | 136 | 5 | 95 | 358 | 82 | 354 | 7.79e-81 | 254 |
MS.gene28023.t1 | AT1G61240 | 46.886 | 273 | 136 | 5 | 95 | 358 | 82 | 354 | 7.79e-81 | 254 |
MS.gene28023.t1 | AT1G61240 | 46.886 | 273 | 136 | 5 | 95 | 358 | 82 | 354 | 7.79e-81 | 254 |
MS.gene28023.t1 | AT1G61240 | 46.886 | 273 | 136 | 5 | 95 | 358 | 82 | 354 | 7.79e-81 | 254 |
MS.gene28023.t1 | AT1G61240 | 48.438 | 256 | 123 | 5 | 95 | 341 | 82 | 337 | 2.21e-80 | 251 |
MS.gene28023.t1 | AT1G11170 | 48.819 | 254 | 121 | 6 | 95 | 339 | 85 | 338 | 3.49e-79 | 248 |
MS.gene28023.t1 | AT1G11170 | 48.819 | 254 | 121 | 6 | 95 | 339 | 85 | 338 | 4.45e-79 | 247 |
MS.gene28023.t1 | AT1G11170 | 48.819 | 254 | 121 | 6 | 95 | 339 | 85 | 338 | 4.45e-79 | 247 |
MS.gene28023.t1 | AT1G11170 | 48.819 | 254 | 121 | 6 | 95 | 339 | 85 | 338 | 1.68e-78 | 249 |
MS.gene28023.t1 | AT1G11170 | 48.819 | 254 | 121 | 6 | 95 | 339 | 85 | 338 | 1.68e-78 | 249 |
MS.gene28023.t1 | AT1G11170 | 48.819 | 254 | 121 | 6 | 95 | 339 | 85 | 338 | 1.68e-78 | 249 |
MS.gene28023.t1 | AT1G11170 | 48.819 | 254 | 121 | 6 | 95 | 339 | 85 | 338 | 1.68e-78 | 249 |
MS.gene28023.t1 | AT4G18530 | 48.523 | 237 | 109 | 6 | 89 | 315 | 71 | 304 | 2.56e-73 | 231 |
MS.gene28023.t1 | AT1G11170 | 49.345 | 229 | 108 | 5 | 95 | 315 | 85 | 313 | 1.78e-70 | 224 |
MS.gene28023.t1 | AT2G25905 | 48.899 | 227 | 97 | 6 | 12 | 237 | 19 | 227 | 1.54e-60 | 195 |
MS.gene28023.t1 | AT1G11170 | 48.023 | 177 | 76 | 3 | 95 | 267 | 85 | 249 | 2.26e-49 | 167 |
Find 97 sgRNAs with CRISPR-Local
Find 322 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGATTTCTTGGCTTATTTAT+AGG | 0.256210 | 4.4:-11329953 | MS.gene28023:CDS |
CACTAGGTACTTTGGCTTAG+AGG | 0.271799 | 4.4:+11328901 | None:intergenic |
CCAGCTTTAGAACCTCAAAA+AGG | 0.272560 | 4.4:-11328159 | MS.gene28023:CDS |
TTGTGTGTGGCACATGATTC+AGG | 0.273901 | 4.4:-11325175 | MS.gene28023:intron |
TAGCCTGCCCATGAGAAAAT+TGG | 0.314625 | 4.4:-11324834 | MS.gene28023:CDS |
TGTAAGATGCAAACCTTAGA+TGG | 0.315869 | 4.4:+11329675 | None:intergenic |
TAGATGGATTATTCATTAAC+TGG | 0.316563 | 4.4:+11329691 | None:intergenic |
TGCAGCATTTGTTGAGATTA+TGG | 0.319829 | 4.4:-11325226 | MS.gene28023:CDS |
CTTCTTCTTGCGCAGATTGT+GGG | 0.327256 | 4.4:-11329239 | MS.gene28023:CDS |
GTTAATGAATAATCCATCTA+AGG | 0.330539 | 4.4:-11329688 | MS.gene28023:intron |
TATTGATGCAGCTGTGAAAA+AGG | 0.334878 | 4.4:-11328846 | MS.gene28023:intron |
GACTGGGAAGCCGGCATGGC+GGG | 0.360772 | 4.4:-11324653 | MS.gene28023:CDS |
TCTGCACCTCTAGGATTTGT+TGG | 0.371914 | 4.4:+11329298 | None:intergenic |
ATCCTTCTATTTCATTATGA+TGG | 0.372976 | 4.4:-11328719 | MS.gene28023:CDS |
TTGCAGAATGAATTTGTTCA+TGG | 0.384104 | 4.4:-11324979 | MS.gene28023:intron |
GTTGTTTATACTGACCTCAT+TGG | 0.388023 | 4.4:+11329210 | None:intergenic |
TCATGTGGGATGAAGACCTT+GGG | 0.405546 | 4.4:-11328440 | MS.gene28023:CDS |
ACTCATCCCATTCGGTTGTT+CGG | 0.405576 | 4.4:+11328696 | None:intergenic |
ACTTCTTCTTGCGCAGATTG+TGG | 0.424332 | 4.4:-11329240 | MS.gene28023:CDS |
TCATATGATGCAACAATGTC+TGG | 0.425811 | 4.4:+11328471 | None:intergenic |
GATTTGCTCGCTCATAACTA+AGG | 0.427980 | 4.4:-11324377 | None:intergenic |
CCTTTGTTGTTGAGAATGTT+GGG | 0.436329 | 4.4:+11329921 | None:intergenic |
TTGTTTATACTGACCTCATT+GGG | 0.438331 | 4.4:+11329211 | None:intergenic |
TATTCCATCACTAGGGGATC+AGG | 0.441095 | 4.4:-11324778 | MS.gene28023:intron |
CAACTGCAGATACATAAAAC+TGG | 0.444624 | 4.4:-11328211 | MS.gene28023:intron |
GGCCATCATAATGAAATAGA+AGG | 0.456517 | 4.4:+11328717 | None:intergenic |
CTGCATTTGTCAATCTACCT+TGG | 0.458934 | 4.4:+11324438 | None:intergenic |
ACCTAGTGACTTTCACTGTT+GGG | 0.459255 | 4.4:-11328886 | MS.gene28023:CDS |
ACCTTTGTTGTTGAGAATGT+TGG | 0.462834 | 4.4:+11329920 | None:intergenic |
GTCTGGATGCAGAAACCTCT+TGG | 0.469618 | 4.4:+11328488 | None:intergenic |
GTGAAAGTCACTAGGTACTT+TGG | 0.474179 | 4.4:+11328893 | None:intergenic |
TTGGAGTTGTTGATGCTCAA+TGG | 0.477545 | 4.4:-11324815 | MS.gene28023:CDS |
TGATAGGGAGAAGCACAGAC+TGG | 0.481524 | 4.4:-11324670 | MS.gene28023:intron |
AGAGGGTATTTACACTTCCC+TGG | 0.486266 | 4.4:+11325261 | None:intergenic |
AGGAGAGGTGTGGCATGGAA+TGG | 0.490387 | 4.4:-11324469 | MS.gene28023:CDS |
TAGATTGACAAATGCAGAAA+GGG | 0.492604 | 4.4:-11324432 | MS.gene28023:CDS |
CACAGACTGGGAAGCCGGCA+TGG | 0.494004 | 4.4:-11324657 | MS.gene28023:CDS |
ATGGAAGGAAGCAAGCTAGA+TGG | 0.497446 | 4.4:+11329786 | None:intergenic |
AGAAGCACAGACTGGGAAGC+CGG | 0.504949 | 4.4:-11324662 | MS.gene28023:CDS |
GCATTCGCGGTAGGGATACA+TGG | 0.508817 | 4.4:-11329752 | MS.gene28023:CDS |
GGTAATCTTTCTGCACCTCT+AGG | 0.512786 | 4.4:+11329289 | None:intergenic |
ATTTGTCATGCATTCGCGGT+AGG | 0.514856 | 4.4:-11329761 | MS.gene28023:CDS |
CCACTCAAACTCATCCCATT+CGG | 0.515447 | 4.4:+11328688 | None:intergenic |
TTCATGTGGGATGAAGACCT+TGG | 0.520316 | 4.4:-11328441 | MS.gene28023:CDS |
TACCTAGTGACTTTCACTGT+TGG | 0.520565 | 4.4:-11328887 | MS.gene28023:CDS |
CACCAAGGTATTCCATCACT+AGG | 0.521315 | 4.4:-11324786 | MS.gene28023:CDS |
AATGAATTTGTTCATGGATG+GGG | 0.522005 | 4.4:-11324973 | MS.gene28023:CDS |
AGAATGAATTTGTTCATGGA+TGG | 0.524742 | 4.4:-11324975 | MS.gene28023:CDS |
TTTGTCATGCATTCGCGGTA+GGG | 0.526165 | 4.4:-11329760 | MS.gene28023:CDS |
ATTGATTTGTCATGCATTCG+CGG | 0.528524 | 4.4:-11329765 | MS.gene28023:CDS |
TAACATACCGCCCGCCATGC+CGG | 0.534890 | 4.4:+11324643 | None:intergenic |
TGATGGCCGAACAACCGAAT+GGG | 0.537360 | 4.4:-11328702 | MS.gene28023:CDS |
TTCTTCTTGCGCAGATTGTG+GGG | 0.537953 | 4.4:-11329238 | MS.gene28023:CDS |
GCGAATGCATGACAAATCAA+TGG | 0.539208 | 4.4:+11329767 | None:intergenic |
ACCAAGGTATTCCATCACTA+GGG | 0.546593 | 4.4:-11324785 | MS.gene28023:CDS |
ACTGGTGAAGAAGCATGGCT+TGG | 0.547308 | 4.4:-11328193 | MS.gene28023:CDS |
GTGCAGAAAGATTACCTCCT+GGG | 0.559187 | 4.4:-11329282 | MS.gene28023:CDS |
GATTGAGCATTAACAATCCC+AGG | 0.559299 | 4.4:+11329265 | None:intergenic |
GAATGAATTTGTTCATGGAT+GGG | 0.560523 | 4.4:-11324974 | MS.gene28023:CDS |
ATTACCTGATCCCCTAGTGA+TGG | 0.561561 | 4.4:+11324774 | None:intergenic |
TGGGAAGCCGGCATGGCGGG+CGG | 0.562402 | 4.4:-11324650 | MS.gene28023:intron |
ATAAAACTGGTGAAGAAGCA+TGG | 0.584590 | 4.4:-11328198 | MS.gene28023:CDS |
GGTTAAGGAGAGGTGTGGCA+TGG | 0.592433 | 4.4:-11324474 | MS.gene28023:CDS |
GTAGATTGACAAATGCAGAA+AGG | 0.597153 | 4.4:-11324433 | MS.gene28023:CDS |
GATAGGGAGAAGCACAGACT+GGG | 0.599023 | 4.4:-11324669 | MS.gene28023:intron |
GGTGCAGAAAGATTACCTCC+TGG | 0.602891 | 4.4:-11329283 | MS.gene28023:CDS |
CTCTTAGGTGGTATGCCAAG+AGG | 0.604637 | 4.4:-11328503 | MS.gene28023:intron |
ATGATGGCCGAACAACCGAA+TGG | 0.604772 | 4.4:-11328703 | MS.gene28023:CDS |
ATTGGTTGCAGGTTAAGGAG+AGG | 0.608721 | 4.4:-11324484 | MS.gene28023:intron |
ATGCATGACAAATCAATGGA+AGG | 0.611009 | 4.4:+11329771 | None:intergenic |
ATTTGCTCGCTCATAACTAA+GGG | 0.612893 | 4.4:-11324376 | None:intergenic |
ATCTCAACAAATGCTGCACA+AGG | 0.613716 | 4.4:+11325231 | None:intergenic |
GCTGCACAAGGAGGAAGAAG+AGG | 0.613830 | 4.4:+11325243 | None:intergenic |
CTGCACAAGGAGGAAGAAGA+GGG | 0.618002 | 4.4:+11325244 | None:intergenic |
TTTGTTTGTGAACACTCACA+TGG | 0.620605 | 4.4:+11328651 | None:intergenic |
GACAAGCACAAGAGAAACCA+GGG | 0.622164 | 4.4:-11325278 | MS.gene28023:CDS |
CGTTAAAATTCTCAACCCCA+AGG | 0.623590 | 4.4:+11328424 | None:intergenic |
AGACAAGCACAAGAGAAACC+AGG | 0.629863 | 4.4:-11325279 | MS.gene28023:CDS |
CCGAATGGGATGAGTTTGAG+TGG | 0.631816 | 4.4:-11328688 | MS.gene28023:CDS |
AGACTGGGAAGCCGGCATGG+CGG | 0.636581 | 4.4:-11324654 | MS.gene28023:CDS |
CCCAACATTCTCAACAACAA+AGG | 0.638927 | 4.4:-11329921 | MS.gene28023:intron |
TTGCAGGTTAAGGAGAGGTG+TGG | 0.643279 | 4.4:-11324479 | MS.gene28023:intron |
ATTGTGGGGTCTTCCCAATG+AGG | 0.644631 | 4.4:-11329224 | MS.gene28023:intron |
GAGATGCATGGCGTTGTGTG+TGG | 0.646944 | 4.4:-11325188 | MS.gene28023:CDS |
AGATTGACAAATGCAGAAAG+GGG | 0.653672 | 4.4:-11324431 | MS.gene28023:CDS |
TGCATTTAGAAAATGCGTCG+AGG | 0.656963 | 4.4:-11324941 | MS.gene28023:intron |
CATGTGGGATGAAGACCTTG+GGG | 0.658086 | 4.4:-11328439 | MS.gene28023:CDS |
ATGGAATGGAGAATGTTCCA+AGG | 0.665287 | 4.4:-11324455 | MS.gene28023:CDS |
CCCCTAGTGATGGAATACCT+TGG | 0.673648 | 4.4:+11324784 | None:intergenic |
CCAAGGTATTCCATCACTAG+GGG | 0.674279 | 4.4:-11324784 | MS.gene28023:CDS |
GTGTTCACAAACAAACCAAG+TGG | 0.686230 | 4.4:-11328643 | MS.gene28023:intron |
ACCCAACAGTGAAAGTCACT+AGG | 0.688212 | 4.4:+11328885 | None:intergenic |
TGGGTTCCAACAAATCCTAG+AGG | 0.698583 | 4.4:-11329304 | MS.gene28023:CDS |
GATTGACAAATGCAGAAAGG+GGG | 0.700784 | 4.4:-11324430 | MS.gene28023:CDS |
TCAACAAATGCTGCACAAGG+AGG | 0.701908 | 4.4:+11325234 | None:intergenic |
GCTCAATGGATTGTTCACCA+AGG | 0.733364 | 4.4:-11324801 | MS.gene28023:CDS |
TGAGCATTAACAATCCCAGG+AGG | 0.775538 | 4.4:+11329268 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATTAATCTATTTATTCTCTT+AGG | - | chr4.4:11325996-11326015 | MS.gene28023:intron | 15.0% |
!! | CATAAAAATAGTTTATGTTA+CGG | + | chr4.4:11329905-11329924 | None:intergenic | 15.0% |
!!! | ATAGTTTTTGTTTTAATTTG+AGG | - | chr4.4:11326163-11326182 | MS.gene28023:intron | 15.0% |
!!! | CAAATGTTTTAATAATCTAA+TGG | - | chr4.4:11329399-11329418 | MS.gene28023:intron | 15.0% |
!!! | CATAGTAATTATTTAGTTTA+AGG | + | chr4.4:11325745-11325764 | None:intergenic | 15.0% |
!!! | TGTTTAAAAGTTTTTTGTAA+AGG | + | chr4.4:11327012-11327031 | None:intergenic | 15.0% |
!!! | TTTATTATCTTTTGATTTTC+TGG | - | chr4.4:11326798-11326817 | MS.gene28023:intron | 15.0% |
!!! | TTTTTTCAAGAAAAATATCA+AGG | - | chr4.4:11328749-11328768 | MS.gene28023:intron | 15.0% |
!! | AAAAGAACTATGTTGTTAAA+AGG | - | chr4.4:11326220-11326239 | MS.gene28023:intron | 20.0% |
!! | AAATTTAAAAACCTTCAACA+TGG | + | chr4.4:11326198-11326217 | None:intergenic | 20.0% |
!! | AGAAGCAAATATTTACTTAA+AGG | + | chr4.4:11324471-11324490 | None:intergenic | 20.0% |
!! | AGAATTATATAATTGCAATG+AGG | - | chr4.4:11324894-11324913 | MS.gene28023:intron | 20.0% |
!! | AGTAAATATTTGCTTCTTTA+TGG | - | chr4.4:11324474-11324493 | MS.gene28023:CDS | 20.0% |
!! | ATATGAATAAAAATTCACTG+AGG | + | chr4.4:11324646-11324665 | None:intergenic | 20.0% |
!! | GTAAATAATACTAGTACTAA+TGG | + | chr4.4:11325956-11325975 | None:intergenic | 20.0% |
!! | TACTAATTAACTATAATCGT+CGG | + | chr4.4:11329930-11329949 | None:intergenic | 20.0% |
!! | TATTTATGTGTATATTTGCA+TGG | - | chr4.4:11330006-11330025 | MS.gene28023:CDS | 20.0% |
!! | TCAACTAAAAAAAATTAGCA+AGG | + | chr4.4:11324703-11324722 | None:intergenic | 20.0% |
!! | TCTTACAATATCATTCTTAA+AGG | - | chr4.4:11324855-11324874 | MS.gene28023:intron | 20.0% |
!!! | AAACTTTTAAACACCAAAAA+TGG | - | chr4.4:11327019-11327038 | MS.gene28023:intron | 20.0% |
!!! | AATCTTTAGTTCAATAAATG+TGG | + | chr4.4:11324951-11324970 | None:intergenic | 20.0% |
!!! | ATATGAGTATATTTTCATGT+GGG | - | chr4.4:11326060-11326079 | MS.gene28023:intron | 20.0% |
!!! | ATCTTAATTTGATGAGTTTA+TGG | + | chr4.4:11324921-11324940 | None:intergenic | 20.0% |
!!! | ATTTTTAAAATGACTTGAAC+TGG | - | chr4.4:11325092-11325111 | MS.gene28023:intron | 20.0% |
!!! | CTATATTTTCTTCGAATTTA+AGG | - | chr4.4:11326253-11326272 | MS.gene28023:intron | 20.0% |
!!! | GAATTATTCTTTGCTTTTTA+AGG | - | chr4.4:11328195-11328214 | MS.gene28023:CDS | 20.0% |
!!! | TGTGTTTTTCAAAATAAAAG+AGG | - | chr4.4:11328532-11328551 | MS.gene28023:intron | 20.0% |
!!! | TTTGATTCAGTTTTTTCATT+TGG | - | chr4.4:11328574-11328593 | MS.gene28023:intron | 20.0% |
!!! | TTTTGAAAACAAAGTACTAA+AGG | + | chr4.4:11326777-11326796 | None:intergenic | 20.0% |
!!! | TTTTTAAAATGACTTGAACT+GGG | - | chr4.4:11325093-11325112 | MS.gene28023:intron | 20.0% |
! | AAAACTAGTGTAAAACTTTG+AGG | - | chr4.4:11326951-11326970 | MS.gene28023:intron | 25.0% |
! | AAAATAGTTTATGTTACGGA+AGG | + | chr4.4:11329901-11329920 | None:intergenic | 25.0% |
! | AAAATTAAGGTTCAAAATGG+TGG | + | chr4.4:11326842-11326861 | None:intergenic | 25.0% |
! | AAACTAGTGTAAAACTTTGA+GGG | - | chr4.4:11326952-11326971 | MS.gene28023:intron | 25.0% |
! | AACATTGTTAGTCATATGAT+TGG | + | chr4.4:11327987-11328006 | None:intergenic | 25.0% |
! | AAGAAATTATAGTGATGAAG+TGG | - | chr4.4:11327208-11327227 | MS.gene28023:intron | 25.0% |
! | AAGAGTTGTGGAAAAAATAT+TGG | - | chr4.4:11327505-11327524 | MS.gene28023:intron | 25.0% |
! | AATCTATTTATTCTCTTAGG+TGG | - | chr4.4:11325999-11326018 | MS.gene28023:intron | 25.0% |
! | ATCCTTCTATTTCATTATGA+TGG | - | chr4.4:11325795-11325814 | MS.gene28023:intron | 25.0% |
! | ATTATACTAAGCTCCAAAAT+GGG | + | chr4.4:11325041-11325060 | None:intergenic | 25.0% |
! | CAGAAAATTAAGGTTCAAAA+TGG | + | chr4.4:11326845-11326864 | None:intergenic | 25.0% |
! | GTTAATGAATAATCCATCTA+AGG | - | chr4.4:11324826-11324845 | MS.gene28023:CDS | 25.0% |
! | GTTATACAAATCAGATTGTT+GGG | - | chr4.4:11327464-11327483 | MS.gene28023:intron | 25.0% |
! | TAAAAATAAAACAAACCAGC+AGG | - | chr4.4:11327847-11327866 | MS.gene28023:intron | 25.0% |
! | TAATGATGTCTAGTATTCTT+AGG | - | chr4.4:11326625-11326644 | MS.gene28023:intron | 25.0% |
! | TAGCATATGCAAAAATTCTT+AGG | + | chr4.4:11324440-11324459 | None:intergenic | 25.0% |
! | TATTATACTAAGCTCCAAAA+TGG | + | chr4.4:11325042-11325061 | None:intergenic | 25.0% |
! | TGTTATACAAATCAGATTGT+TGG | - | chr4.4:11327463-11327482 | MS.gene28023:intron | 25.0% |
! | TGTTTGACTGTTTATTTGTT+TGG | - | chr4.4:11329202-11329221 | MS.gene28023:intron | 25.0% |
! | TTAATGATTGTTGAAATGAG+AGG | - | chr4.4:11328256-11328275 | MS.gene28023:intron | 25.0% |
! | TTTCAAGAAAAATATCAAGG+AGG | - | chr4.4:11328752-11328771 | MS.gene28023:intron | 25.0% |
!! | AAAAGACTTTGATTTATCTC+AGG | + | chr4.4:11328151-11328170 | None:intergenic | 25.0% |
!! | ATAACAGAAAACTTTGAGTT+TGG | + | chr4.4:11325978-11325997 | None:intergenic | 25.0% |
!! | ATCATTAATTTAGTTCCAGA+AGG | + | chr4.4:11328244-11328263 | None:intergenic | 25.0% |
!! | CATATGAGTATATTTTCATG+TGG | - | chr4.4:11326059-11326078 | MS.gene28023:intron | 25.0% |
!! | GAAAAACAAATGAAAGTATG+AGG | - | chr4.4:11324514-11324533 | MS.gene28023:intron | 25.0% |
!! | TTCTTATTTGAGCTAATGTT+GGG | + | chr4.4:11327193-11327212 | None:intergenic | 25.0% |
!! | TTCTTCAAGAGATGAAATTT+TGG | + | chr4.4:11327555-11327574 | None:intergenic | 25.0% |
!! | TTTATTAAGTTGCTACTTGT+AGG | - | chr4.4:11325584-11325603 | MS.gene28023:intron | 25.0% |
!! | TTTCTTATTTGAGCTAATGT+TGG | + | chr4.4:11327194-11327213 | None:intergenic | 25.0% |
!! | TTTTGTAAAGGTTTTTGTGA+AGG | + | chr4.4:11327000-11327019 | None:intergenic | 25.0% |
!!! | AACCAAAGCTTTAAAAGTTT+TGG | - | chr4.4:11327701-11327720 | MS.gene28023:intron | 25.0% |
!!! | AATGGACGTAACTATTTTTA+AGG | + | chr4.4:11329463-11329482 | None:intergenic | 25.0% |
!!! | ACCAAAGCTTTAAAAGTTTT+GGG | - | chr4.4:11327702-11327721 | MS.gene28023:intron | 25.0% |
!!! | CTCATTTAGATAAGTTTTGT+TGG | - | chr4.4:11327765-11327784 | MS.gene28023:intron | 25.0% |
!!! | CTTGTTGTGATATTTTTCTT+TGG | - | chr4.4:11324537-11324556 | MS.gene28023:intron | 25.0% |
!!! | TAAGTTGTTTCTTTACCAAA+TGG | - | chr4.4:11325361-11325380 | MS.gene28023:intron | 25.0% |
!!! | TAGATGGATTATTCATTAAC+TGG | + | chr4.4:11324826-11324845 | None:intergenic | 25.0% |
!!! | TTTTGAGAACAAAGTACTAA+AGG | + | chr4.4:11329063-11329082 | None:intergenic | 25.0% |
AAGATTATTGAGAAGGATGT+TGG | - | chr4.4:11328475-11328494 | MS.gene28023:CDS | 30.0% | |
AAGCCATCATAAACAACTAA+TGG | + | chr4.4:11329481-11329500 | None:intergenic | 30.0% | |
AAGCTCAAGACAGAAAATTA+AGG | + | chr4.4:11326855-11326874 | None:intergenic | 30.0% | |
AATACTAGACATCATTACCT+AGG | + | chr4.4:11326622-11326641 | None:intergenic | 30.0% | |
ATACTAGACATCATTACCTA+GGG | + | chr4.4:11326621-11326640 | None:intergenic | 30.0% | |
ATTTGAGAGCTCAAAGTTTA+TGG | - | chr4.4:11327123-11327142 | MS.gene28023:intron | 30.0% | |
CAAATTCAAATAGAAAGCAG+AGG | + | chr4.4:11325906-11325925 | None:intergenic | 30.0% | |
CTCTGCTTTCTATTTGAATT+TGG | - | chr4.4:11325904-11325923 | MS.gene28023:intron | 30.0% | |
CTGAACAAAGAAGATCTTTA+AGG | - | chr4.4:11327630-11327649 | MS.gene28023:intron | 30.0% | |
GGAGAAAAAGATTATTGAGA+AGG | - | chr4.4:11328468-11328487 | MS.gene28023:CDS | 30.0% | |
GGATTTCTTGGCTTATTTAT+AGG | - | chr4.4:11324561-11324580 | MS.gene28023:intron | 30.0% | |
TAGATTGACAAATGCAGAAA+GGG | - | chr4.4:11330082-11330101 | MS.gene28023:intron | 30.0% | |
TCAAAAAGTTAGTGACTAGA+TGG | + | chr4.4:11325552-11325571 | None:intergenic | 30.0% | |
TGTGTATATTTGCATGGTAT+TGG | - | chr4.4:11330012-11330031 | MS.gene28023:CDS | 30.0% | |
TTCATCTGACAAAACTTCAT+TGG | + | chr4.4:11328700-11328719 | None:intergenic | 30.0% | |
TTCCATGCTTACTCTTTAAA+AGG | - | chr4.4:11329362-11329381 | MS.gene28023:intron | 30.0% | |
TTGAAATTGCAAAAGAAGCT+TGG | - | chr4.4:11327303-11327322 | MS.gene28023:intron | 30.0% | |
TTGTTTATACTGACCTCATT+GGG | + | chr4.4:11325306-11325325 | None:intergenic | 30.0% | |
TTTGAGAGCTCAAAGTTTAT+GGG | - | chr4.4:11327124-11327143 | MS.gene28023:intron | 30.0% | |
! | AACAACTCCAATTTTCTCAT+GGG | + | chr4.4:11329690-11329709 | None:intergenic | 30.0% |
! | AATGAATTTGTTCATGGATG+GGG | - | chr4.4:11329541-11329560 | MS.gene28023:intron | 30.0% |
! | ACAAAGAAGATCTTTAAGGA+TGG | - | chr4.4:11327634-11327653 | MS.gene28023:intron | 30.0% |
! | ACTAAAGCTGCTAATTTTGA+GGG | - | chr4.4:11328424-11328443 | MS.gene28023:CDS | 30.0% |
! | AGAATGAATTTGTTCATGGA+TGG | - | chr4.4:11329539-11329558 | MS.gene28023:intron | 30.0% |
! | AGGAGAAAACTATGATTTGT+GGG | - | chr4.4:11327082-11327101 | MS.gene28023:intron | 30.0% |
! | GAATGAATTTGTTCATGGAT+GGG | - | chr4.4:11329540-11329559 | MS.gene28023:intron | 30.0% |
! | GACACTTTAACAGTTTTCAA+AGG | - | chr4.4:11325764-11325783 | MS.gene28023:intron | 30.0% |
! | GTTCGACTTTATTTACCATT+TGG | + | chr4.4:11325379-11325398 | None:intergenic | 30.0% |
! | GTTGTGATATTTTTCTTTGG+AGG | - | chr4.4:11324540-11324559 | MS.gene28023:intron | 30.0% |
! | TACTAAAGCTGCTAATTTTG+AGG | - | chr4.4:11328423-11328442 | MS.gene28023:CDS | 30.0% |
! | TTGCAGAATGAATTTGTTCA+TGG | - | chr4.4:11329535-11329554 | MS.gene28023:intron | 30.0% |
! | TTTTACTCCAAAGTTGTCAT+TGG | - | chr4.4:11328034-11328053 | MS.gene28023:intron | 30.0% |
!! | AATCAAAGTCTTTTGAGTGT+TGG | - | chr4.4:11328157-11328176 | MS.gene28023:CDS | 30.0% |
!! | AATGAAGTTTTGTCAGATGA+AGG | - | chr4.4:11328699-11328718 | MS.gene28023:CDS | 30.0% |
!! | TGTGAAAGAATGAGTTTTGT+TGG | - | chr4.4:11326474-11326493 | MS.gene28023:intron | 30.0% |
!! | TTCCTTTTAAAGAGTAAGCA+TGG | + | chr4.4:11329367-11329386 | None:intergenic | 30.0% |
!! | TTTTTCTTTGGAGGATTTCT+TGG | - | chr4.4:11324549-11324568 | MS.gene28023:intron | 30.0% |
!!! | AAATGTTGAAGGTGCTTTTT+TGG | - | chr4.4:11327661-11327680 | MS.gene28023:intron | 30.0% |
!!! | AACCTTGTTTTATCCCATTT+TGG | - | chr4.4:11325025-11325044 | MS.gene28023:intron | 30.0% |
!!! | TAGATAAGTTTTGTTGGTAC+AGG | - | chr4.4:11327771-11327790 | MS.gene28023:intron | 30.0% |
!!! | TCCCAAAACTTTTAAAGCTT+TGG | + | chr4.4:11327706-11327725 | None:intergenic | 30.0% |
AGATGAGGAGCAATTGTTTA+AGG | - | chr4.4:11327904-11327923 | MS.gene28023:intron | 35.0% | |
AGATTGACAAATGCAGAAAG+GGG | - | chr4.4:11330083-11330102 | MS.gene28023:intron | 35.0% | |
AGGATGGAAGAAAATGTTGA+AGG | - | chr4.4:11327650-11327669 | MS.gene28023:intron | 35.0% | |
ATAAAACTGGTGAAGAAGCA+TGG | - | chr4.4:11326316-11326335 | MS.gene28023:intron | 35.0% | |
ATGCATGACAAATCAATGGA+AGG | + | chr4.4:11324746-11324765 | None:intergenic | 35.0% | |
CAACTGCAGATACATAAAAC+TGG | - | chr4.4:11326303-11326322 | MS.gene28023:intron | 35.0% | |
CAATCAATCACCAAAGTAAG+TGG | + | chr4.4:11325184-11325203 | None:intergenic | 35.0% | |
CAGAGGATTTATTTACCACT+TGG | + | chr4.4:11325889-11325908 | None:intergenic | 35.0% | |
CAGGAGAAAACTATGATTTG+TGG | - | chr4.4:11327081-11327100 | MS.gene28023:intron | 35.0% | |
CATGTAGTAGCAAAGAAACA+TGG | - | chr4.4:11327942-11327961 | MS.gene28023:intron | 35.0% | |
CGTCCATTAGTTGTTTATGA+TGG | - | chr4.4:11329475-11329494 | MS.gene28023:intron | 35.0% | |
CTCCAAAATGGGATAAAACA+AGG | + | chr4.4:11325030-11325049 | None:intergenic | 35.0% | |
CTTGAAAAAACTCCAAGCAT+TGG | + | chr4.4:11328739-11328758 | None:intergenic | 35.0% | |
GAAACATGGCTAATAGATAG+TGG | - | chr4.4:11327956-11327975 | MS.gene28023:intron | 35.0% | |
GGCCATCATAATGAAATAGA+AGG | + | chr4.4:11325800-11325819 | None:intergenic | 35.0% | |
GGTTTCAATATCCATGTTGA+AGG | - | chr4.4:11326184-11326203 | MS.gene28023:intron | 35.0% | |
GTAGATTGACAAATGCAGAA+AGG | - | chr4.4:11330081-11330100 | MS.gene28023:intron | 35.0% | |
GTGTTCCAGTCAGAATTTAT+TGG | + | chr4.4:11329504-11329523 | None:intergenic | 35.0% | |
GTTGTTTATACTGACCTCAT+TGG | + | chr4.4:11325307-11325326 | None:intergenic | 35.0% | |
TATTGATGCAGCTGTGAAAA+AGG | - | chr4.4:11325668-11325687 | MS.gene28023:intron | 35.0% | |
TCATATGATGCAACAATGTC+TGG | + | chr4.4:11326046-11326065 | None:intergenic | 35.0% | |
TGGTGATTGATTGCAGATTT+GGG | - | chr4.4:11325191-11325210 | MS.gene28023:CDS | 35.0% | |
TGTAAGATGCAAACCTTAGA+TGG | + | chr4.4:11324842-11324861 | None:intergenic | 35.0% | |
TTGGTCATGTTGTGTATGTT+TGG | - | chr4.4:11328593-11328612 | MS.gene28023:intron | 35.0% | |
TTTGTTTGTGAACACTCACA+TGG | + | chr4.4:11325866-11325885 | None:intergenic | 35.0% | |
! | AAAATATCAAGGAGGAGTGT+TGG | - | chr4.4:11328760-11328779 | MS.gene28023:intron | 35.0% |
! | AACCTCAAAAAGGGTTGATT+TGG | - | chr4.4:11326365-11326384 | MS.gene28023:intron | 35.0% |
! | CAACAACTCCAATTTTCTCA+TGG | + | chr4.4:11329691-11329710 | None:intergenic | 35.0% |
! | CAGAAAATTGCCACTTACTT+TGG | - | chr4.4:11325171-11325190 | MS.gene28023:intron | 35.0% |
! | TAGTTTTCTCCTGAAAACAC+AGG | + | chr4.4:11327074-11327093 | None:intergenic | 35.0% |
! | TGAGTATCCTTTTTGCAATG+TGG | + | chr4.4:11327749-11327768 | None:intergenic | 35.0% |
! | TGCAGCATTTGTTGAGATTA+TGG | - | chr4.4:11329288-11329307 | MS.gene28023:CDS | 35.0% |
! | TGGGATAAAACAAGGTTTTG+AGG | + | chr4.4:11325022-11325041 | None:intergenic | 35.0% |
! | TTCCAAATCAACCCTTTTTG+AGG | + | chr4.4:11326370-11326389 | None:intergenic | 35.0% |
! | TTGGTGATTGATTGCAGATT+TGG | - | chr4.4:11325190-11325209 | MS.gene28023:CDS | 35.0% |
! | TTTTGTGAAGGTTTTCTTGC+TGG | + | chr4.4:11326988-11327007 | None:intergenic | 35.0% |
!! | AAGTTTTGTCAGATGAAGGT+TGG | - | chr4.4:11328703-11328722 | MS.gene28023:CDS | 35.0% |
!! | ACCTTTGTTGTTGAGAATGT+TGG | + | chr4.4:11324597-11324616 | None:intergenic | 35.0% |
!! | AGTTTTTCAGCTCAGAAAAG+GGG | - | chr4.4:11328343-11328362 | MS.gene28023:intron | 35.0% |
!! | ATTGATTTGTCATGCATTCG+CGG | - | chr4.4:11324749-11324768 | MS.gene28023:intron | 35.0% |
!! | CAGCTTTAGAACCTCAAAAA+GGG | - | chr4.4:11326356-11326375 | MS.gene28023:intron | 35.0% |
!! | CAGTTTTATGTATCTGCAGT+TGG | + | chr4.4:11326305-11326324 | None:intergenic | 35.0% |
!! | CCTTTGTTGTTGAGAATGTT+GGG | + | chr4.4:11324596-11324615 | None:intergenic | 35.0% |
!! | CTCAGCTTTAGTTGATGATT+GGG | + | chr4.4:11328644-11328663 | None:intergenic | 35.0% |
!! | GAGTTTTTCAGCTCAGAAAA+GGG | - | chr4.4:11328342-11328361 | MS.gene28023:intron | 35.0% |
!! | TTTGAGTGTTGGACAAATGA+TGG | - | chr4.4:11328168-11328187 | MS.gene28023:CDS | 35.0% |
!!! | ACACTTGTTAGCTTTTGCAA+AGG | + | chr4.4:11329177-11329196 | None:intergenic | 35.0% |
!!! | ATTTTGGCTTCAAACATCTC+TGG | + | chr4.4:11327539-11327558 | None:intergenic | 35.0% |
!!! | TGCACTATTTTTGATCCTTC+TGG | - | chr4.4:11328226-11328245 | MS.gene28023:intron | 35.0% |
AAACTCGCTTCAACTCTACT+TGG | + | chr4.4:11328328-11328347 | None:intergenic | 40.0% | |
AACACACAAGTGATGCACAA+AGG | + | chr4.4:11328518-11328537 | None:intergenic | 40.0% | |
AAGAAAGTAAACCAGTCCCT+AGG | - | chr4.4:11326602-11326621 | MS.gene28023:intron | 40.0% | |
AAGAGCCCCATTGATCTTAA+CGG | - | chr4.4:11326914-11326933 | MS.gene28023:intron | 40.0% | |
ACAATTGCTCCTCATCTTCT+TGG | + | chr4.4:11327901-11327920 | None:intergenic | 40.0% | |
ACAGACCCGTTAAGATCAAT+GGG | + | chr4.4:11326923-11326942 | None:intergenic | 40.0% | |
ACCTAGTGACTTTCACTGTT+GGG | - | chr4.4:11325628-11325647 | MS.gene28023:intron | 40.0% | |
ACCTTGTCCACATTGCAAAA+AGG | - | chr4.4:11327739-11327758 | MS.gene28023:intron | 40.0% | |
AGATAGAGAGAGTGAGAAAG+AGG | + | chr4.4:11325695-11325714 | None:intergenic | 40.0% | |
AGTGATGAAGTGGCAAAAGA+AGG | - | chr4.4:11327218-11327237 | MS.gene28023:intron | 40.0% | |
ATCTCAACAAATGCTGCACA+AGG | + | chr4.4:11329286-11329305 | None:intergenic | 40.0% | |
ATGCAGAGCTGCTTGTATTA+TGG | + | chr4.4:11327255-11327274 | None:intergenic | 40.0% | |
ATGGAATGGAGAATGTTCCA+AGG | - | chr4.4:11330059-11330078 | MS.gene28023:intron | 40.0% | |
CAAGCTCTACATTTAACTCC+TGG | + | chr4.4:11327797-11327816 | None:intergenic | 40.0% | |
CACTCTCTCTATCTTTGCAT+AGG | - | chr4.4:11325701-11325720 | MS.gene28023:intron | 40.0% | |
CCAAAAATGGCTTCCAATAG+TGG | - | chr4.4:11327032-11327051 | MS.gene28023:intron | 40.0% | |
CCCAACATTCTCAACAACAA+AGG | - | chr4.4:11324593-11324612 | MS.gene28023:intron | 40.0% | |
CGTTAAAATTCTCAACCCCA+AGG | + | chr4.4:11326093-11326112 | None:intergenic | 40.0% | |
CTGCATTTGTCAATCTACCT+TGG | + | chr4.4:11330079-11330098 | None:intergenic | 40.0% | |
GAGTCTTACAAGCAAGCTTA+TGG | - | chr4.4:11326695-11326714 | MS.gene28023:intron | 40.0% | |
GATTGACAAATGCAGAAAGG+GGG | - | chr4.4:11330084-11330103 | MS.gene28023:intron | 40.0% | |
GATTGAGCATTAACAATCCC+AGG | + | chr4.4:11325252-11325271 | None:intergenic | 40.0% | |
GCACATATGCAGTAAGCTAA+GGG | + | chr4.4:11325524-11325543 | None:intergenic | 40.0% | |
GCGAATGCATGACAAATCAA+TGG | + | chr4.4:11324750-11324769 | None:intergenic | 40.0% | |
GGAGTTTGAAGAAGCAAGAA+GGG | - | chr4.4:11328614-11328633 | MS.gene28023:intron | 40.0% | |
GGCTTCCAATAAATTCTGAC+TGG | - | chr4.4:11329496-11329515 | MS.gene28023:intron | 40.0% | |
GTGAAAGTCACTAGGTACTT+TGG | + | chr4.4:11325624-11325643 | None:intergenic | 40.0% | |
GTGTTCACAAACAAACCAAG+TGG | - | chr4.4:11325871-11325890 | MS.gene28023:intron | 40.0% | |
TACCTAGTGACTTTCACTGT+TGG | - | chr4.4:11325627-11325646 | MS.gene28023:intron | 40.0% | |
TCCAAAGTTGTCATTGGCAA+TGG | - | chr4.4:11328040-11328059 | MS.gene28023:intron | 40.0% | |
TCCATTGCCAATGACAACTT+TGG | + | chr4.4:11328044-11328063 | None:intergenic | 40.0% | |
TCTACTTGGAAAAACACGCA+AGG | + | chr4.4:11328314-11328333 | None:intergenic | 40.0% | |
TCTCAGTGATCAAAGAGTTG+TGG | - | chr4.4:11327493-11327512 | MS.gene28023:intron | 40.0% | |
TGCACATATGCAGTAAGCTA+AGG | + | chr4.4:11325525-11325544 | None:intergenic | 40.0% | |
TGCATTTAGAAAATGCGTCG+AGG | - | chr4.4:11329573-11329592 | MS.gene28023:intron | 40.0% | |
TGGAGGTAAAGAACCACTAT+TGG | + | chr4.4:11327048-11327067 | None:intergenic | 40.0% | |
TGGAGTTTGAAGAAGCAAGA+AGG | - | chr4.4:11328613-11328632 | MS.gene28023:intron | 40.0% | |
TGTAGAGCTTGTAACCAACT+TGG | - | chr4.4:11327806-11327825 | MS.gene28023:intron | 40.0% | |
TTACAAGCAAGCTTATGGCT+TGG | - | chr4.4:11326700-11326719 | MS.gene28023:intron | 40.0% | |
TTATGGGACGTGGTTGAAAA+TGG | - | chr4.4:11327140-11327159 | MS.gene28023:intron | 40.0% | |
TTCTGACTGGAACACAATGA+TGG | - | chr4.4:11329509-11329528 | MS.gene28023:intron | 40.0% | |
TTGCTATGTTAGAGACTGCA+AGG | - | chr4.4:11328398-11328417 | MS.gene28023:intron | 40.0% | |
TTGGAGTTGTTGATGCTCAA+TGG | - | chr4.4:11329699-11329718 | MS.gene28023:CDS | 40.0% | |
TTGTAACCAACTTGGTCATG+TGG | - | chr4.4:11327814-11327833 | MS.gene28023:intron | 40.0% | |
! | AATCTTTTTCTCCTCCTGCA+TGG | + | chr4.4:11328461-11328480 | None:intergenic | 40.0% |
! | ACCAAGGTATTCCATCACTA+GGG | - | chr4.4:11329729-11329748 | MS.gene28023:CDS | 40.0% |
! | AGCTCAGAAAAGGGGAATTT+TGG | - | chr4.4:11328351-11328370 | MS.gene28023:intron | 40.0% |
! | CGTGTTTGAATTGGCTTCAT+TGG | + | chr4.4:11325501-11325520 | None:intergenic | 40.0% |
! | GAGCTAATGTTGGGTTGTTT+GGG | + | chr4.4:11327184-11327203 | None:intergenic | 40.0% |
! | GTTTTCCTTTGCGCTTGATA+GGG | - | chr4.4:11329829-11329848 | MS.gene28023:intron | 40.0% |
! | TCCTTTTTGCAATGTGGACA+AGG | + | chr4.4:11327743-11327762 | None:intergenic | 40.0% |
! | TGAGCTAATGTTGGGTTGTT+TGG | + | chr4.4:11327185-11327204 | None:intergenic | 40.0% |
! | TGTTTTCCTTTGCGCTTGAT+AGG | - | chr4.4:11329828-11329847 | MS.gene28023:intron | 40.0% |
! | TTTTCTCCTGAAAACACAGG+AGG | + | chr4.4:11327071-11327090 | None:intergenic | 40.0% |
! | TTTTTGCAATGTGGACAAGG+TGG | + | chr4.4:11327740-11327759 | None:intergenic | 40.0% |
!! | AAGGGGGTATTACAAGTCAA+AGG | - | chr4.4:11330100-11330119 | MS.gene28023:intron | 40.0% |
!! | AGGGGGTATTACAAGTCAAA+GGG | - | chr4.4:11330101-11330120 | MS.gene28023:intron | 40.0% |
!! | ATGGTATTGGTTGCAGGTTA+AGG | - | chr4.4:11330025-11330044 | MS.gene28023:intron | 40.0% |
!! | ATTTGCATGGTATTGGTTGC+AGG | - | chr4.4:11330019-11330038 | MS.gene28023:intron | 40.0% |
!! | CCACTATTGGAAGCCATTTT+TGG | + | chr4.4:11327035-11327054 | None:intergenic | 40.0% |
!! | CCAGCTTTAGAACCTCAAAA+AGG | - | chr4.4:11326355-11326374 | MS.gene28023:intron | 40.0% |
!! | CGAGTTTTTCAGCTCAGAAA+AGG | - | chr4.4:11328341-11328360 | MS.gene28023:intron | 40.0% |
!! | GCTCAGCTTTAGTTGATGAT+TGG | + | chr4.4:11328645-11328664 | None:intergenic | 40.0% |
!! | TTGGTTTTTGCCTTTGTTGC+TGG | + | chr4.4:11327687-11327706 | None:intergenic | 40.0% |
!!! | ACCACTGTTAGCTTTTGCAA+AGG | + | chr4.4:11326891-11326910 | None:intergenic | 40.0% |
!!! | CCTTTTTGAGGTTCTAAAGC+TGG | + | chr4.4:11326358-11326377 | None:intergenic | 40.0% |
ACCCAACAGTGAAAGTCACT+AGG | + | chr4.4:11325632-11325651 | None:intergenic | 45.0% | |
ACTCATCCCATTCGGTTGTT+CGG | + | chr4.4:11325821-11325840 | None:intergenic | 45.0% | |
ACTTCTTCTTGCGCAGATTG+TGG | - | chr4.4:11325274-11325293 | MS.gene28023:CDS | 45.0% | |
AGAAGCTTGGAACAAGCTGA+AGG | - | chr4.4:11327316-11327335 | MS.gene28023:intron | 45.0% | |
AGACAAGCACAAGAGAAACC+AGG | - | chr4.4:11329235-11329254 | MS.gene28023:CDS | 45.0% | |
AGACATCATTACCTAGGGAC+TGG | + | chr4.4:11326616-11326635 | None:intergenic | 45.0% | |
AGAGCCCCATTGATCTTAAC+GGG | - | chr4.4:11326915-11326934 | MS.gene28023:intron | 45.0% | |
AGCTCAAAGTTTATGGGACG+TGG | - | chr4.4:11327130-11327149 | MS.gene28023:intron | 45.0% | |
ATGGAAGGAAGCAAGCTAGA+TGG | + | chr4.4:11324731-11324750 | None:intergenic | 45.0% | |
ATTACCTGATCCCCTAGTGA+TGG | + | chr4.4:11329743-11329762 | None:intergenic | 45.0% | |
ATTGCTCCTCATCTTCTTGG+TGG | + | chr4.4:11327898-11327917 | None:intergenic | 45.0% | |
ATTGGTTGCAGGTTAAGGAG+AGG | - | chr4.4:11330030-11330049 | MS.gene28023:intron | 45.0% | |
ATTTGTCATGCATTCGCGGT+AGG | - | chr4.4:11324753-11324772 | MS.gene28023:intron | 45.0% | |
CACAGACCCGTTAAGATCAA+TGG | + | chr4.4:11326924-11326943 | None:intergenic | 45.0% | |
CAGACCCGTTAAGATCAATG+GGG | + | chr4.4:11326922-11326941 | None:intergenic | 45.0% | |
CATGCATCTCGCGAAAAAAC+AGG | + | chr4.4:11329316-11329335 | None:intergenic | 45.0% | |
CATGTTGAGGTCAAAGGCAA+AGG | - | chr4.4:11328067-11328086 | MS.gene28023:intron | 45.0% | |
CCACTCAAACTCATCCCATT+CGG | + | chr4.4:11325829-11325848 | None:intergenic | 45.0% | |
CTGTAAAGTTACCATGCAGG+AGG | - | chr4.4:11328447-11328466 | MS.gene28023:CDS | 45.0% | |
CTTCTTCTTGCGCAGATTGT+GGG | - | chr4.4:11325275-11325294 | MS.gene28023:CDS | 45.0% | |
GACAAGCACAAGAGAAACCA+GGG | - | chr4.4:11329236-11329255 | MS.gene28023:CDS | 45.0% | |
GATGTTTGCTTCCACTCTAC+TGG | + | chr4.4:11328292-11328311 | None:intergenic | 45.0% | |
GCAAAAGCTTTCCAGTAGAG+TGG | - | chr4.4:11328278-11328297 | MS.gene28023:intron | 45.0% | |
GCCTTTGCAAAAGCTAACAG+TGG | - | chr4.4:11326887-11326906 | MS.gene28023:intron | 45.0% | |
GCTTCATTGGAGCTTATCGA+CGG | + | chr4.4:11325488-11325507 | None:intergenic | 45.0% | |
GGAAAGATGAGACCAATGCT+TGG | - | chr4.4:11328724-11328743 | MS.gene28023:CDS | 45.0% | |
GGACAACATGTTGAGGTCAA+AGG | - | chr4.4:11328061-11328080 | MS.gene28023:intron | 45.0% | |
GGTAATCTTTCTGCACCTCT+AGG | + | chr4.4:11325228-11325247 | None:intergenic | 45.0% | |
GTGCAGAAAGATTACCTCCT+GGG | - | chr4.4:11325232-11325251 | MS.gene28023:CDS | 45.0% | |
TAGCCTGCCCATGAGAAAAT+TGG | - | chr4.4:11329680-11329699 | MS.gene28023:intron | 45.0% | |
TATTCCATCACTAGGGGATC+AGG | - | chr4.4:11329736-11329755 | MS.gene28023:CDS | 45.0% | |
TCAACAAATGCTGCACAAGG+AGG | + | chr4.4:11329283-11329302 | None:intergenic | 45.0% | |
TCATGTGGGATGAAGACCTT+GGG | - | chr4.4:11326074-11326093 | MS.gene28023:intron | 45.0% | |
TGAGCATTAACAATCCCAGG+AGG | + | chr4.4:11325249-11325268 | None:intergenic | 45.0% | |
TGGCAATGGACAACATGTTG+AGG | - | chr4.4:11328054-11328073 | MS.gene28023:intron | 45.0% | |
TGGGTTCCAACAAATCCTAG+AGG | - | chr4.4:11325210-11325229 | MS.gene28023:CDS | 45.0% | |
TTCATGTGGGATGAAGACCT+TGG | - | chr4.4:11326073-11326092 | MS.gene28023:intron | 45.0% | |
TTCTTCTTGCGCAGATTGTG+GGG | - | chr4.4:11325276-11325295 | MS.gene28023:CDS | 45.0% | |
TTGTGTGTGGCACATGATTC+AGG | - | chr4.4:11329339-11329358 | MS.gene28023:intron | 45.0% | |
TTTGTCATGCATTCGCGGTA+GGG | - | chr4.4:11324754-11324773 | MS.gene28023:intron | 45.0% | |
! | AATGTTGGGTTGTTTGGGAG+AGG | + | chr4.4:11327179-11327198 | None:intergenic | 45.0% |
! | ACTCCAATTTTCTCATGGGC+AGG | + | chr4.4:11329686-11329705 | None:intergenic | 45.0% |
! | AGCTAAGGGCGTGTTTGAAT+TGG | + | chr4.4:11325510-11325529 | None:intergenic | 45.0% |
! | CACCAAGGTATTCCATCACT+AGG | - | chr4.4:11329728-11329747 | MS.gene28023:CDS | 45.0% |
! | CACTAGGTACTTTGGCTTAG+AGG | + | chr4.4:11325616-11325635 | None:intergenic | 45.0% |
! | CCAAGGTATTCCATCACTAG+GGG | - | chr4.4:11329730-11329749 | MS.gene28023:CDS | 45.0% |
! | TGCAGTTGATGCAGTCTTAG+AGG | - | chr4.4:11324996-11325015 | MS.gene28023:intron | 45.0% |
! | TTGATCTTAACGGGTCTGTG+AGG | - | chr4.4:11326924-11326943 | MS.gene28023:intron | 45.0% |
!! | AGAGGGTATTTACACTTCCC+TGG | + | chr4.4:11329256-11329275 | None:intergenic | 45.0% |
!! | GCTCAATGGATTGTTCACCA+AGG | - | chr4.4:11329713-11329732 | MS.gene28023:CDS | 45.0% |
!! | TCTGCACCTCTAGGATTTGT+TGG | + | chr4.4:11325219-11325238 | None:intergenic | 45.0% |
!!! | AAGTTTTGTTGGTACAGGCC+AGG | - | chr4.4:11327776-11327795 | MS.gene28023:intron | 45.0% |
!!! | CTGTTTTTTCGCGAGATGCA+TGG | - | chr4.4:11329314-11329333 | MS.gene28023:intron | 45.0% |
!!! | GCTTTTTTGGCCAGCAACAA+AGG | - | chr4.4:11327674-11327693 | MS.gene28023:intron | 45.0% |
AGCTTGGAACAAGCTGAAGG+AGG | - | chr4.4:11327319-11327338 | MS.gene28023:intron | 50.0% | |
ATGATGGCCGAACAACCGAA+TGG | - | chr4.4:11325811-11325830 | MS.gene28023:intron | 50.0% | |
ATTGTGGGGTCTTCCCAATG+AGG | - | chr4.4:11325290-11325309 | MS.gene28023:intron | 50.0% | |
CATGTGGGATGAAGACCTTG+GGG | - | chr4.4:11326075-11326094 | MS.gene28023:intron | 50.0% | |
CCAACTTGGTCATGTGGAGA+AGG | - | chr4.4:11327820-11327839 | MS.gene28023:intron | 50.0% | |
CCGAATGGGATGAGTTTGAG+TGG | - | chr4.4:11325826-11325845 | MS.gene28023:intron | 50.0% | |
CCTTCTCCACATGACCAAGT+TGG | + | chr4.4:11327823-11327842 | None:intergenic | 50.0% | |
CTCTTAGGTGGTATGCCAAG+AGG | - | chr4.4:11326011-11326030 | MS.gene28023:intron | 50.0% | |
CTGCACAAGGAGGAAGAAGA+GGG | + | chr4.4:11329273-11329292 | None:intergenic | 50.0% | |
CTTCTCCCTATCAAGCGCAA+AGG | + | chr4.4:11329837-11329856 | None:intergenic | 50.0% | |
GGGCTGTAAAGTTACCATGC+AGG | - | chr4.4:11328444-11328463 | MS.gene28023:CDS | 50.0% | |
GGTCAAAGGCAAAGGAGTTG+TGG | - | chr4.4:11328075-11328094 | MS.gene28023:intron | 50.0% | |
GGTGCAGAAAGATTACCTCC+TGG | - | chr4.4:11325231-11325250 | MS.gene28023:CDS | 50.0% | |
GTCTGGATGCAGAAACCTCT+TGG | + | chr4.4:11326029-11326048 | None:intergenic | 50.0% | |
GTGGCTGTTGAAACTCTCTC+AGG | - | chr4.4:11328094-11328113 | MS.gene28023:intron | 50.0% | |
TCTCCTGAAAACACAGGAGG+TGG | + | chr4.4:11327068-11327087 | None:intergenic | 50.0% | |
TGAGCACCACCAAGAAGATG+AGG | - | chr4.4:11327889-11327908 | MS.gene28023:intron | 50.0% | |
TGATGGCCGAACAACCGAAT+GGG | - | chr4.4:11325812-11325831 | MS.gene28023:intron | 50.0% | |
TTGCAGGTTAAGGAGAGGTG+TGG | - | chr4.4:11330035-11330054 | MS.gene28023:intron | 50.0% | |
! | AAGCTGAAGGAGGAGTACGA+AGG | - | chr4.4:11327329-11327348 | MS.gene28023:intron | 50.0% |
! | ACTGGTGAAGAAGCATGGCT+TGG | - | chr4.4:11326321-11326340 | MS.gene28023:intron | 50.0% |
! | CCCCTAGTGATGGAATACCT+TGG | + | chr4.4:11329733-11329752 | None:intergenic | 50.0% |
! | GATAGGGAGAAGCACAGACT+GGG | - | chr4.4:11329845-11329864 | MS.gene28023:intron | 50.0% |
! | TGATAGGGAGAAGCACAGAC+TGG | - | chr4.4:11329844-11329863 | MS.gene28023:intron | 50.0% |
!! | CTTGGTGGTGCTCAACAACT+CGG | + | chr4.4:11327883-11327902 | None:intergenic | 50.0% |
!! | TTGGTGGTGCTCAACAACTC+GGG | + | chr4.4:11327882-11327901 | None:intergenic | 50.0% |
CCTGAAAACACAGGAGGTGG+AGG | + | chr4.4:11327065-11327084 | None:intergenic | 55.0% | |
GAGATGCATGGCGTTGTGTG+TGG | - | chr4.4:11329326-11329345 | MS.gene28023:intron | 55.0% | |
GCATTCGCGGTAGGGATACA+TGG | - | chr4.4:11324762-11324781 | MS.gene28023:intron | 55.0% | |
GCTGCACAAGGAGGAAGAAG+AGG | + | chr4.4:11329274-11329293 | None:intergenic | 55.0% | |
GGTTGTTTGGGAGAGGTGGT+GGG | + | chr4.4:11327172-11327191 | None:intergenic | 55.0% | |
! | AGAAGCACAGACTGGGAAGC+CGG | - | chr4.4:11329852-11329871 | MS.gene28023:intron | 55.0% |
! | AGGAGAGGTGTGGCATGGAA+TGG | - | chr4.4:11330045-11330064 | MS.gene28023:intron | 55.0% |
! | CCTCCACCTCCTGTGTTTTC+AGG | - | chr4.4:11327062-11327081 | MS.gene28023:intron | 55.0% |
! | GGTTAAGGAGAGGTGTGGCA+TGG | - | chr4.4:11330040-11330059 | MS.gene28023:intron | 55.0% |
! | GTTGGGTTGTTTGGGAGAGG+TGG | + | chr4.4:11327176-11327195 | None:intergenic | 55.0% |
GGGTTGTTTGGGAGAGGTGG+TGG | + | chr4.4:11327173-11327192 | None:intergenic | 60.0% | |
TAACATACCGCCCGCCATGC+CGG | + | chr4.4:11329874-11329893 | None:intergenic | 60.0% | |
!! | CTCGGGCTTGTTGTTCCTGC+TGG | + | chr4.4:11327865-11327884 | None:intergenic | 60.0% |
AGACTGGGAAGCCGGCATGG+CGG | - | chr4.4:11329860-11329879 | MS.gene28023:intron | 65.0% | |
CACAGACTGGGAAGCCGGCA+TGG | - | chr4.4:11329857-11329876 | MS.gene28023:intron | 65.0% | |
GACTGGGAAGCCGGCATGGC+GGG | - | chr4.4:11329861-11329880 | MS.gene28023:intron | 70.0% | |
! | TGGGAAGCCGGCATGGCGGG+CGG | - | chr4.4:11329864-11329883 | MS.gene28023:intron | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.4 | gene | 11324379 | 11330157 | 11324379 | ID=MS.gene28023 |
chr4.4 | mRNA | 11324379 | 11330157 | 11324379 | ID=MS.gene28023.t1;Parent=MS.gene28023 |
chr4.4 | exon | 11330153 | 11330157 | 11330153 | ID=MS.gene28023.t1.exon1;Parent=MS.gene28023.t1 |
chr4.4 | CDS | 11330153 | 11330157 | 11330153 | ID=cds.MS.gene28023.t1;Parent=MS.gene28023.t1 |
chr4.4 | exon | 11329922 | 11330033 | 11329922 | ID=MS.gene28023.t1.exon2;Parent=MS.gene28023.t1 |
chr4.4 | CDS | 11329922 | 11330033 | 11329922 | ID=cds.MS.gene28023.t1;Parent=MS.gene28023.t1 |
chr4.4 | exon | 11329689 | 11329817 | 11329689 | ID=MS.gene28023.t1.exon3;Parent=MS.gene28023.t1 |
chr4.4 | CDS | 11329689 | 11329817 | 11329689 | ID=cds.MS.gene28023.t1;Parent=MS.gene28023.t1 |
chr4.4 | exon | 11329225 | 11329329 | 11329225 | ID=MS.gene28023.t1.exon4;Parent=MS.gene28023.t1 |
chr4.4 | CDS | 11329225 | 11329329 | 11329225 | ID=cds.MS.gene28023.t1;Parent=MS.gene28023.t1 |
chr4.4 | exon | 11328847 | 11328930 | 11328847 | ID=MS.gene28023.t1.exon5;Parent=MS.gene28023.t1 |
chr4.4 | CDS | 11328847 | 11328930 | 11328847 | ID=cds.MS.gene28023.t1;Parent=MS.gene28023.t1 |
chr4.4 | exon | 11328644 | 11328759 | 11328644 | ID=MS.gene28023.t1.exon6;Parent=MS.gene28023.t1 |
chr4.4 | CDS | 11328644 | 11328759 | 11328644 | ID=cds.MS.gene28023.t1;Parent=MS.gene28023.t1 |
chr4.4 | exon | 11328417 | 11328518 | 11328417 | ID=MS.gene28023.t1.exon7;Parent=MS.gene28023.t1 |
chr4.4 | CDS | 11328417 | 11328518 | 11328417 | ID=cds.MS.gene28023.t1;Parent=MS.gene28023.t1 |
chr4.4 | exon | 11328111 | 11328224 | 11328111 | ID=MS.gene28023.t1.exon8;Parent=MS.gene28023.t1 |
chr4.4 | CDS | 11328111 | 11328224 | 11328111 | ID=cds.MS.gene28023.t1;Parent=MS.gene28023.t1 |
chr4.4 | exon | 11325176 | 11325299 | 11325176 | ID=MS.gene28023.t1.exon9;Parent=MS.gene28023.t1 |
chr4.4 | CDS | 11325176 | 11325299 | 11325176 | ID=cds.MS.gene28023.t1;Parent=MS.gene28023.t1 |
chr4.4 | exon | 11324942 | 11324995 | 11324942 | ID=MS.gene28023.t1.exon10;Parent=MS.gene28023.t1 |
chr4.4 | CDS | 11324942 | 11324995 | 11324942 | ID=cds.MS.gene28023.t1;Parent=MS.gene28023.t1 |
chr4.4 | exon | 11324779 | 11324853 | 11324779 | ID=MS.gene28023.t1.exon11;Parent=MS.gene28023.t1 |
chr4.4 | CDS | 11324779 | 11324853 | 11324779 | ID=cds.MS.gene28023.t1;Parent=MS.gene28023.t1 |
chr4.4 | exon | 11324651 | 11324686 | 11324651 | ID=MS.gene28023.t1.exon12;Parent=MS.gene28023.t1 |
chr4.4 | CDS | 11324651 | 11324686 | 11324651 | ID=cds.MS.gene28023.t1;Parent=MS.gene28023.t1 |
chr4.4 | exon | 11324379 | 11324495 | 11324379 | ID=MS.gene28023.t1.exon13;Parent=MS.gene28023.t1 |
chr4.4 | CDS | 11324379 | 11324495 | 11324379 | ID=cds.MS.gene28023.t1;Parent=MS.gene28023.t1 |
Gene Sequence |
Protein sequence |