Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29637.t1 | XP_003616631.1 | 96 | 630 | 23 | 1 | 6 | 633 | 19 | 648 | 9.50E-303 | 1048.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29637.t1 | O04235 | 87.1 | 629 | 75 | 3 | 6 | 633 | 19 | 642 | 5.9e-277 | 954.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29637.t1 | G7KH07 | 96.0 | 630 | 23 | 1 | 6 | 633 | 19 | 648 | 6.9e-303 | 1048.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene29637.t1 | TR | HMG |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29637.t1 | MTR_5g082570 | 97.937 | 630 | 11 | 1 | 6 | 633 | 19 | 648 | 0.0 | 1269 |
| MS.gene29637.t1 | MTR_1g022345 | 88.854 | 628 | 67 | 1 | 6 | 633 | 19 | 643 | 0.0 | 1076 |
| MS.gene29637.t1 | MTR_3g108380 | 72.581 | 62 | 17 | 0 | 529 | 590 | 30 | 91 | 4.75e-18 | 80.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29637.t1 | AT3G28730 | 75.316 | 632 | 148 | 5 | 5 | 632 | 18 | 645 | 0.0 | 895 |
| MS.gene29637.t1 | AT3G51880 | 45.122 | 82 | 44 | 1 | 536 | 616 | 41 | 122 | 8.63e-11 | 62.0 |
Find 139 sgRNAs with CRISPR-Local
Find 331 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTACTAAGCCTGGAAAATTT+AGG | 0.219977 | 5.1:-64651159 | MS.gene29637:CDS |
| CACTTATTCCAAAGGTGTTT+TGG | 0.231104 | 5.1:+64653164 | None:intergenic |
| ACAGTATTACGTGGCTTGTC+TGG | 0.233775 | 5.1:-64651190 | MS.gene29637:CDS |
| GGGTCTCCTACTGATGATTC+TGG | 0.258546 | 5.1:-64650091 | MS.gene29637:CDS |
| ATTCCCCTCTTGGGTGCATT+TGG | 0.275228 | 5.1:+64649795 | None:intergenic |
| TAATCCTGGGATTTCATTTA+CGG | 0.275475 | 5.1:-64649588 | MS.gene29637:CDS |
| TTTCTGTTAGCGGGCGCAAT+TGG | 0.275567 | 5.1:-64653126 | MS.gene29637:CDS |
| GTAACAAGAGTGGGAGGTTT+AGG | 0.278780 | 5.1:+64651049 | None:intergenic |
| AGGAAATATGCTGGCTTTCA+TGG | 0.282409 | 5.1:-64652656 | MS.gene29637:CDS |
| GATGCTGTTGTTACATTTGA+TGG | 0.292831 | 5.1:-64652134 | MS.gene29637:CDS |
| GGGTGTTGGAATTCGGTATA+TGG | 0.303438 | 5.1:+64652327 | None:intergenic |
| TGGGGAGAAGTTGATTTAAA+TGG | 0.308241 | 5.1:-64653106 | MS.gene29637:intron |
| TTAGAAGACAGATCCTTCTT+TGG | 0.323308 | 5.1:+64649906 | None:intergenic |
| TTCTGTTAGCGGGCGCAATT+GGG | 0.325415 | 5.1:-64653125 | MS.gene29637:CDS |
| ACACCAAGTTGATTAGTCTT+TGG | 0.335916 | 5.1:+64653454 | None:intergenic |
| GGCTTGAAAATTATGCATTT+AGG | 0.341853 | 5.1:-64650677 | MS.gene29637:CDS |
| AAAGAAGGATCTGTCTTCTA+AGG | 0.353142 | 5.1:-64649904 | MS.gene29637:CDS |
| GTCGAACTACACTGCTATAC+TGG | 0.359472 | 5.1:+64651882 | None:intergenic |
| CAGATTGGAGTTGTCGTATA+AGG | 0.360980 | 5.1:-64651432 | MS.gene29637:intron |
| CAACCGATGAATATTGATTC+AGG | 0.372802 | 5.1:-64649312 | MS.gene29637:CDS |
| CAAAATTACTTGGAGAGAAC+TGG | 0.390368 | 5.1:-64649559 | MS.gene29637:CDS |
| ATACTGTGGTGAACACTTCA+TGG | 0.393386 | 5.1:+64651206 | None:intergenic |
| CAGTATTACGTGGCTTGTCT+GGG | 0.395701 | 5.1:-64651189 | MS.gene29637:CDS |
| AACGAGTACCACAATTTGTA+TGG | 0.395792 | 5.1:-64650799 | MS.gene29637:CDS |
| CTGTCATTCTTGCGGCTTCA+AGG | 0.398065 | 5.1:-64651926 | MS.gene29637:CDS |
| TAAAATGTTACCTCGGTGTA+AGG | 0.403709 | 5.1:+64652102 | None:intergenic |
| GCACCCAAGAGGGGAATGTC+TGG | 0.406706 | 5.1:-64649789 | MS.gene29637:CDS |
| ACAAACTGGGTGTTGGAATT+CGG | 0.407573 | 5.1:+64652320 | None:intergenic |
| ATTACCTGCATCACAATATG+AGG | 0.420402 | 5.1:+64651613 | None:intergenic |
| ACGGATGTGGCAAAATTACT+TGG | 0.423556 | 5.1:-64649569 | MS.gene29637:CDS |
| GAATCCAGACATTCCCCTCT+TGG | 0.427330 | 5.1:+64649785 | None:intergenic |
| AATTCCAACACCCAGTTTGT+TGG | 0.433634 | 5.1:-64652317 | MS.gene29637:CDS |
| ATCTCAGAAAGATTCGTTGA+TGG | 0.433640 | 5.1:-64652360 | MS.gene29637:intron |
| AATATAAAGAAAGCTAATCC+TGG | 0.438071 | 5.1:-64649602 | MS.gene29637:CDS |
| TTCTCTGAATATTACGAAAG+AGG | 0.438473 | 5.1:+64650821 | None:intergenic |
| ATTCTTGCGGCTTCAAGGAC+AGG | 0.439827 | 5.1:-64651921 | MS.gene29637:CDS |
| TGAAAATTGCCCACCTGCTC+AGG | 0.441127 | 5.1:-64652291 | MS.gene29637:intron |
| AGCCACACCAGTAGTTGGTT+GGG | 0.447410 | 5.1:+64650649 | None:intergenic |
| AATCCAGACATTCCCCTCTT+GGG | 0.456255 | 5.1:+64649786 | None:intergenic |
| GTCTCACAAACTAACCTTCA+AGG | 0.456533 | 5.1:-64652595 | MS.gene29637:CDS |
| GGTCTCCTACTGATGATTCT+GGG | 0.456976 | 5.1:-64650090 | MS.gene29637:CDS |
| TGAAGACTTCGTTGCCGAAA+AGG | 0.457341 | 5.1:-64650122 | MS.gene29637:CDS |
| ATTCACTGGATTTCGTGATC+AGG | 0.458777 | 5.1:-64653404 | MS.gene29637:intron |
| GTACCCTCATATTGTGATGC+AGG | 0.458886 | 5.1:-64651617 | MS.gene29637:intron |
| TGGGATTTCATTTACGGATG+TGG | 0.460128 | 5.1:-64649582 | MS.gene29637:CDS |
| TTCCATGTGGATGACACAAC+TGG | 0.462015 | 5.1:-64652550 | MS.gene29637:CDS |
| GGGGCCAAAGTTACTAAGCC+TGG | 0.468481 | 5.1:-64651169 | MS.gene29637:CDS |
| ACCTGAACATGCAGTTCAAA+GGG | 0.471466 | 5.1:-64650698 | MS.gene29637:intron |
| CCTCTTTCTCATCACCACTT+TGG | 0.473171 | 5.1:+64650047 | None:intergenic |
| GGGTTGTTCTACAAATTCAC+TGG | 0.473286 | 5.1:-64653418 | MS.gene29637:CDS |
| TCATCTCTGAAAGCTGAAGA+TGG | 0.473971 | 5.1:-64651109 | MS.gene29637:CDS |
| CTTGGTGTTCAGATCAAAGA+AGG | 0.475188 | 5.1:-64653439 | MS.gene29637:CDS |
| ACCTTAGCCACACCAGTAGT+TGG | 0.481295 | 5.1:+64650644 | None:intergenic |
| GTTGCCGAAAAGGACGATGA+AGG | 0.482808 | 5.1:-64650112 | MS.gene29637:CDS |
| CTCCTTTACACTTATTCCAA+AGG | 0.483306 | 5.1:+64653156 | None:intergenic |
| TTCCATTTCAGGAAATATGC+TGG | 0.483906 | 5.1:-64652665 | MS.gene29637:intron |
| TTATGTGGTTGAAAGTGAAT+TGG | 0.487973 | 5.1:-64651492 | MS.gene29637:CDS |
| GAATCAATATTCATCGGTTG+TGG | 0.489399 | 5.1:+64649315 | None:intergenic |
| AGAAGCAACTTTCTGTTAGC+GGG | 0.495842 | 5.1:-64653135 | MS.gene29637:CDS |
| GTGGCCGACGTTGGTGTTGG+AGG | 0.496458 | 5.1:-64652161 | MS.gene29637:CDS |
| TGGTGTGGCTAAGGTTCTTG+AGG | 0.498002 | 5.1:-64650636 | MS.gene29637:CDS |
| ATTCTATAGATATACCTCAT+TGG | 0.500824 | 5.1:+64652525 | None:intergenic |
| GGTGTGGCTAAGGTTCTTGA+GGG | 0.503505 | 5.1:-64650635 | MS.gene29637:CDS |
| TATTACGAAAGAGGTGCTCT+TGG | 0.505169 | 5.1:+64650830 | None:intergenic |
| TGATCGGGGTTGTAGAATCC+GGG | 0.506188 | 5.1:-64653583 | MS.gene29637:intron |
| CTCTAAGTACAAAGACAGAT+TGG | 0.506656 | 5.1:-64651447 | MS.gene29637:CDS |
| ATCACCAACAAACTGGGTGT+TGG | 0.507629 | 5.1:+64652313 | None:intergenic |
| ACCAACTACTGGTGTGGCTA+AGG | 0.508426 | 5.1:-64650645 | MS.gene29637:CDS |
| AGCTTTCGAAGTGCCTTTAG+CGG | 0.509555 | 5.1:-64652620 | MS.gene29637:CDS |
| ACACGAGCCTTTGCCTCGTA+TGG | 0.510732 | 5.1:+64649384 | None:intergenic |
| GAGAAGCAACTTTCTGTTAG+CGG | 0.514450 | 5.1:-64653136 | MS.gene29637:CDS |
| GTTTGTGAGACGTCCGCTAA+AGG | 0.515987 | 5.1:+64652607 | None:intergenic |
| CTTGAAGCCGCAAGAATGAC+AGG | 0.517227 | 5.1:+64651927 | None:intergenic |
| TTCTGACTAGATTGACTATG+TGG | 0.520017 | 5.1:-64650923 | MS.gene29637:intron |
| CACCTTTGGAATAAGTGTAA+AGG | 0.520401 | 5.1:-64653158 | MS.gene29637:CDS |
| AATATGCTGGCTTTCATGGT+TGG | 0.520470 | 5.1:-64652652 | MS.gene29637:CDS |
| GTGAACAAACTCACCTGAGC+AGG | 0.527575 | 5.1:+64652278 | None:intergenic |
| CCAAAGTGGTGATGAGAAAG+AGG | 0.530710 | 5.1:-64650047 | MS.gene29637:intron |
| TAGCCACACCAGTAGTTGGT+TGG | 0.530732 | 5.1:+64650648 | None:intergenic |
| TACCTGAACATGCAGTTCAA+AGG | 0.530797 | 5.1:-64650699 | MS.gene29637:intron |
| TGATAAAACCATACAAATTG+TGG | 0.532500 | 5.1:+64650791 | None:intergenic |
| TTTCCTGAATCAATATTCAT+CGG | 0.535542 | 5.1:+64649309 | None:intergenic |
| TTTAATTATGACTGAAGATG+AGG | 0.538394 | 5.1:-64653967 | None:intergenic |
| AACAAACTCACCTGAGCAGG+TGG | 0.540462 | 5.1:+64652281 | None:intergenic |
| GGAGATGCCCAACCAACTAC+TGG | 0.540924 | 5.1:-64650656 | MS.gene29637:CDS |
| TCAAAAGATGCAGATGAAGA+TGG | 0.544147 | 5.1:-64649849 | MS.gene29637:CDS |
| CACTCTTGTTACTCATGAAG+AGG | 0.544159 | 5.1:-64651038 | MS.gene29637:intron |
| GAATTTGAGCGACATGCTGC+TGG | 0.545421 | 5.1:-64650901 | MS.gene29637:CDS |
| TCTGTGGCCGACGTTGGTGT+TGG | 0.546144 | 5.1:-64652164 | MS.gene29637:CDS |
| AATGAATCTGACAGTGCCTA+AGG | 0.547696 | 5.1:-64649288 | None:intergenic |
| AAATTTAGGAGTTGTCAAGA+TGG | 0.550659 | 5.1:-64651145 | MS.gene29637:CDS |
| TTGCCGAAAAGGACGATGAA+GGG | 0.553982 | 5.1:-64650111 | MS.gene29637:CDS |
| GGATCCAAATGCACCCAAGA+GGG | 0.558632 | 5.1:-64649799 | MS.gene29637:CDS |
| TTTCTGATGCGCTCAAGATG+TGG | 0.559322 | 5.1:+64650590 | None:intergenic |
| AGTTACACCTGTCATTCTTG+CGG | 0.563102 | 5.1:-64651934 | MS.gene29637:CDS |
| AGTGAGCGTGACATGGATGA+AGG | 0.565116 | 5.1:-64653479 | MS.gene29637:CDS |
| ATATAAAGAAAGCTAATCCT+GGG | 0.568398 | 5.1:-64649601 | MS.gene29637:CDS |
| AAAGAAGAAGCTCTTCTCAA+GGG | 0.568660 | 5.1:+64651075 | None:intergenic |
| TTTGAGCGACATGCTGCTGG+TGG | 0.569661 | 5.1:-64650898 | MS.gene29637:CDS |
| CCGTAATAAAATAATGTCTG+TGG | 0.570681 | 5.1:-64652180 | MS.gene29637:CDS |
| TCTCACAAACTAACCTTCAA+GGG | 0.570778 | 5.1:-64652594 | MS.gene29637:CDS |
| CTCCAGTTGTGTCATCCACA+TGG | 0.578099 | 5.1:+64652548 | None:intergenic |
| GAAAGAAGAAGCTCTTCTCA+AGG | 0.578564 | 5.1:+64651074 | None:intergenic |
| TGAATGTACAGCTGAGGAGA+AGG | 0.578829 | 5.1:-64649409 | MS.gene29637:intron |
| GAAGGAGCCATACGAGGCAA+AGG | 0.582318 | 5.1:-64649391 | MS.gene29637:CDS |
| CTAATAACGACGAAGGTATG+TGG | 0.584079 | 5.1:+64651673 | None:intergenic |
| ATAGTTCGAAACTGATTATG+TGG | 0.585231 | 5.1:-64651507 | MS.gene29637:intron |
| CTGACATAGTGAGCGTGACA+TGG | 0.596124 | 5.1:-64653486 | MS.gene29637:CDS |
| GAGCGCATCAGAAATGAAGC+TGG | 0.599655 | 5.1:-64650581 | MS.gene29637:CDS |
| GTCTCCTACTGATGATTCTG+GGG | 0.610889 | 5.1:-64650089 | MS.gene29637:CDS |
| TCTTCATGAGTAACAAGAGT+GGG | 0.616456 | 5.1:+64651040 | None:intergenic |
| AAGAAGAAGCTCTTCTCAAG+GGG | 0.618644 | 5.1:+64651076 | None:intergenic |
| TCTGTTAGCGGGCGCAATTG+GGG | 0.620357 | 5.1:-64653124 | MS.gene29637:CDS |
| GTTCCAAAGACTAATCAACT+TGG | 0.620408 | 5.1:-64653457 | MS.gene29637:CDS |
| TGCCCAACCAACTACTGGTG+TGG | 0.630935 | 5.1:-64650651 | MS.gene29637:CDS |
| GATTCTGATGCTAGCCAAAG+TGG | 0.631437 | 5.1:-64650061 | MS.gene29637:CDS |
| ACATCCGTAAATGAAATCCC+AGG | 0.636983 | 5.1:+64649584 | None:intergenic |
| CTCTTCATGAGTAACAAGAG+TGG | 0.642987 | 5.1:+64651039 | None:intergenic |
| AGTATTACGTGGCTTGTCTG+GGG | 0.645525 | 5.1:-64651188 | MS.gene29637:CDS |
| GATCCAAATGCACCCAAGAG+GGG | 0.645585 | 5.1:-64649798 | MS.gene29637:CDS |
| ATAATGTCTGTGGCCGACGT+TGG | 0.646831 | 5.1:-64652170 | MS.gene29637:CDS |
| TTGGTGTTCAGATCAAAGAA+GGG | 0.650065 | 5.1:-64653438 | MS.gene29637:CDS |
| TTGAGCGACATGCTGCTGGT+GGG | 0.652007 | 5.1:-64650897 | MS.gene29637:CDS |
| TCATGAGTAACAAGAGTGGG+AGG | 0.655574 | 5.1:+64651043 | None:intergenic |
| TGACACAACTGGAGCCAATG+AGG | 0.660429 | 5.1:-64652539 | MS.gene29637:intron |
| TCTGCCCCAGAATCATCAGT+AGG | 0.661015 | 5.1:+64650085 | None:intergenic |
| TTCACCTCCAACACCAACGT+CGG | 0.664425 | 5.1:+64652157 | None:intergenic |
| GATCGGGGTTGTAGAATCCG+GGG | 0.665238 | 5.1:-64653582 | MS.gene29637:intron |
| AGGATCCAAATGCACCCAAG+AGG | 0.672756 | 5.1:-64649800 | MS.gene29637:CDS |
| GTGTTCACCACAGTATTACG+TGG | 0.675365 | 5.1:-64651199 | MS.gene29637:CDS |
| TTACCTGCATCACAATATGA+GGG | 0.680413 | 5.1:+64651614 | None:intergenic |
| GTCGAGACTAATAACGACGA+AGG | 0.690699 | 5.1:+64651666 | None:intergenic |
| TGAGGAGAAGGAGCCATACG+AGG | 0.695374 | 5.1:-64649397 | MS.gene29637:CDS |
| TGGTGAAGATGAAAGTGACG+AGG | 0.704697 | 5.1:-64650561 | MS.gene29637:CDS |
| AGACAAGCCACGTAATACTG+TGG | 0.714541 | 5.1:+64651192 | None:intergenic |
| ACAAACTCACCTGAGCAGGT+GGG | 0.719960 | 5.1:+64652282 | None:intergenic |
| TGTGATCTTGGAGTTCCATG+TGG | 0.743249 | 5.1:-64652563 | MS.gene29637:CDS |
| TGAAGATGAAAGTGACGAGG+AGG | 0.754949 | 5.1:-64650558 | MS.gene29637:intron |
| GTATTGCAATCCTTACACCG+AGG | 0.833639 | 5.1:-64652112 | MS.gene29637:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTATTATAAATTTTTAAAT+AGG | - | chr5.1:64649604-64649623 | MS.gene29637:CDS | 0.0% |
| !! | AATTATATCAAATATAGATT+AGG | + | chr5.1:64652720-64652739 | None:intergenic | 10.0% |
| !!! | ATTATAAATTTTTAAATAGG+TGG | - | chr5.1:64649607-64649626 | MS.gene29637:intron | 10.0% |
| !! | AAATTTATAAATCATTGACA+TGG | + | chr5.1:64649526-64649545 | None:intergenic | 15.0% |
| !! | AATTTATAAATCATTGACAT+GGG | + | chr5.1:64649525-64649544 | None:intergenic | 15.0% |
| !! | TTATGTTATATATATACCAA+TGG | - | chr5.1:64653522-64653541 | MS.gene29637:CDS | 15.0% |
| !!! | TTGCTTTTGTATATATTAAT+CGG | - | chr5.1:64653087-64653106 | MS.gene29637:intron | 15.0% |
| !! | AAATCAATAATCAACAGTTT+AGG | + | chr5.1:64651849-64651868 | None:intergenic | 20.0% |
| !! | ATAGATAATAAACAATAGTC+TGG | + | chr5.1:64652939-64652958 | None:intergenic | 20.0% |
| !! | ATTTACAATTCAATAATCAG+GGG | - | chr5.1:64652016-64652035 | MS.gene29637:intron | 20.0% |
| !! | CATTTACAATTCAATAATCA+GGG | - | chr5.1:64652015-64652034 | MS.gene29637:intron | 20.0% |
| !! | CTACATCAAATATATGTAAT+TGG | + | chr5.1:64649896-64649915 | None:intergenic | 20.0% |
| !! | GACTATCATATATTAAATAC+TGG | - | chr5.1:64652257-64652276 | MS.gene29637:intron | 20.0% |
| !! | TAATTCATTTAAGTATCCAT+AGG | - | chr5.1:64649453-64649472 | MS.gene29637:intron | 20.0% |
| !! | TAATTTATATCCAACAACAT+TGG | - | chr5.1:64652820-64652839 | MS.gene29637:intron | 20.0% |
| !! | TAGATCATAAAATAAACCTT+AGG | + | chr5.1:64651405-64651424 | None:intergenic | 20.0% |
| !! | TCACTGTTATTGTTTATAAA+AGG | - | chr5.1:64649546-64649565 | MS.gene29637:CDS | 20.0% |
| !! | TCATTTACAATTCAATAATC+AGG | - | chr5.1:64652014-64652033 | MS.gene29637:intron | 20.0% |
| !!! | CTTTTATAAAGTTCTAATAC+TGG | - | chr5.1:64650541-64650560 | MS.gene29637:intron | 20.0% |
| ! | AAAATCTTCCTTATCCAAAT+TGG | - | chr5.1:64650798-64650817 | MS.gene29637:CDS | 25.0% |
| ! | AATATAAAGAAAGCTAATCC+TGG | - | chr5.1:64653648-64653667 | MS.gene29637:intron | 25.0% |
| ! | AATCTTCAGTATAAGATGAA+TGG | + | chr5.1:64650408-64650427 | None:intergenic | 25.0% |
| ! | AGATGTAGATATTAATGACT+GGG | - | chr5.1:64649978-64649997 | MS.gene29637:intron | 25.0% |
| ! | ATAAAAGGACTATGAAAACT+GGG | - | chr5.1:64649561-64649580 | MS.gene29637:CDS | 25.0% |
| ! | ATATAAAGAAAGCTAATCCT+GGG | - | chr5.1:64653649-64653668 | MS.gene29637:intron | 25.0% |
| ! | ATATATGTAATTGGACATTC+AGG | + | chr5.1:64649887-64649906 | None:intergenic | 25.0% |
| ! | ATTCTATAGATATACCTCAT+TGG | + | chr5.1:64650728-64650747 | None:intergenic | 25.0% |
| ! | CAGATAAAAATATATTCTGG+GGG | - | chr5.1:64649691-64649710 | MS.gene29637:intron | 25.0% |
| ! | CATATATTTGATGTAGACTA+AGG | - | chr5.1:64649900-64649919 | MS.gene29637:CDS | 25.0% |
| ! | CGTTCTAATTTAAGTAAACA+AGG | - | chr5.1:64652790-64652809 | MS.gene29637:intron | 25.0% |
| ! | GAAAAAACAGAAGAAGAAAA+AGG | - | chr5.1:64653430-64653449 | MS.gene29637:CDS | 25.0% |
| ! | GAAAACATCAACATAAGAAA+TGG | + | chr5.1:64650030-64650049 | None:intergenic | 25.0% |
| ! | GATTGATTGATGTGTAAATT+TGG | - | chr5.1:64651940-64651959 | MS.gene29637:CDS | 25.0% |
| ! | GCAGATAAAAATATATTCTG+GGG | - | chr5.1:64649690-64649709 | MS.gene29637:intron | 25.0% |
| ! | GGCAGATAAAAATATATTCT+GGG | - | chr5.1:64649689-64649708 | MS.gene29637:intron | 25.0% |
| ! | TATAAAAGGACTATGAAAAC+TGG | - | chr5.1:64649560-64649579 | MS.gene29637:CDS | 25.0% |
| ! | TATCCTTATATTTCCATTTC+AGG | - | chr5.1:64650574-64650593 | MS.gene29637:CDS | 25.0% |
| ! | TATTTGATCTTTCTCTTGAA+AGG | + | chr5.1:64651248-64651267 | None:intergenic | 25.0% |
| ! | TCTGTCAAAATGTTAATCAA+AGG | + | chr5.1:64649961-64649980 | None:intergenic | 25.0% |
| ! | TGATAAAACCATACAAATTG+TGG | + | chr5.1:64652462-64652481 | None:intergenic | 25.0% |
| ! | TTTCCTGAAATGGAAATATA+AGG | + | chr5.1:64650580-64650599 | None:intergenic | 25.0% |
| ! | TTTCCTGAATCAATATTCAT+CGG | + | chr5.1:64653944-64653963 | None:intergenic | 25.0% |
| !! | ATTCATGTTCTTTTCTCAAA+TGG | - | chr5.1:64653484-64653503 | MS.gene29637:CDS | 25.0% |
| !! | CAAATATTTTCCAATGTTGT+TGG | + | chr5.1:64652833-64652852 | None:intergenic | 25.0% |
| !! | CTTTTGTATATATTAATCGG+TGG | - | chr5.1:64653090-64653109 | MS.gene29637:intron | 25.0% |
| !! | GAGGTAACATTTTAAATACT+CGG | - | chr5.1:64651157-64651176 | MS.gene29637:CDS | 25.0% |
| !! | GAGTATTTAAAATGTTACCT+CGG | + | chr5.1:64651158-64651177 | None:intergenic | 25.0% |
| !! | TGCATAATATTTTTCGTATC+AGG | - | chr5.1:64651043-64651062 | MS.gene29637:CDS | 25.0% |
| !!! | ACAATTTGTATGGTTTTATC+AGG | - | chr5.1:64652461-64652480 | MS.gene29637:intron | 25.0% |
| !!! | CCACAGACATTATTTTATTA+CGG | + | chr5.1:64651073-64651092 | None:intergenic | 25.0% |
| AAATTTAGGAGTTGTCAAGA+TGG | - | chr5.1:64652105-64652124 | MS.gene29637:intron | 30.0% | |
| ACAACTTAGTAACACATGAT+AGG | + | chr5.1:64653808-64653827 | None:intergenic | 30.0% | |
| ACTAGTTGCCAAGTAAAATT+TGG | + | chr5.1:64652504-64652523 | None:intergenic | 30.0% | |
| AGACTGGAAGATAGAAAATT+TGG | + | chr5.1:64649379-64649398 | None:intergenic | 30.0% | |
| ATAGTTCGAAACTGATTATG+TGG | - | chr5.1:64651743-64651762 | MS.gene29637:intron | 30.0% | |
| ATATGCAATACAGAAAACAC+AGG | + | chr5.1:64652974-64652993 | None:intergenic | 30.0% | |
| ATGTGTAAATTTGGTACTGT+GGG | - | chr5.1:64651949-64651968 | MS.gene29637:CDS | 30.0% | |
| ATTACTGTTCAAGTCCAATT+TGG | + | chr5.1:64650815-64650834 | None:intergenic | 30.0% | |
| CAGATGTAGATATTAATGAC+TGG | - | chr5.1:64649977-64649996 | MS.gene29637:intron | 30.0% | |
| CATTGGAAAATATTTGAGCA+TGG | - | chr5.1:64652837-64652856 | MS.gene29637:intron | 30.0% | |
| CCGTAATAAAATAATGTCTG+TGG | - | chr5.1:64651070-64651089 | MS.gene29637:CDS | 30.0% | |
| GACTAAGGAATTCAAATATC+TGG | - | chr5.1:64649915-64649934 | MS.gene29637:CDS | 30.0% | |
| GGCTTGAAAATTATGCATTT+AGG | - | chr5.1:64652573-64652592 | MS.gene29637:CDS | 30.0% | |
| GGGCAGATAAAAATATATTC+TGG | - | chr5.1:64649688-64649707 | MS.gene29637:intron | 30.0% | |
| TAAAAGGACTATGAAAACTG+GGG | - | chr5.1:64649562-64649581 | MS.gene29637:CDS | 30.0% | |
| TAATCCTGGGATTTCATTTA+CGG | - | chr5.1:64653662-64653681 | MS.gene29637:intron | 30.0% | |
| TACCGAAAAATATTTCCACA+GGG | + | chr5.1:64653060-64653079 | None:intergenic | 30.0% | |
| TCATCTTATACTGAAGATTG+TGG | - | chr5.1:64650409-64650428 | MS.gene29637:intron | 30.0% | |
| TCATTTAAGTATCCATAGGA+AGG | - | chr5.1:64649457-64649476 | MS.gene29637:intron | 30.0% | |
| TTACTAAGCCTGGAAAATTT+AGG | - | chr5.1:64652091-64652110 | MS.gene29637:intron | 30.0% | |
| TTATAGACAATCTTGCAGAA+GGG | + | chr5.1:64653585-64653604 | None:intergenic | 30.0% | |
| TTATGTGGTTGAAAGTGAAT+TGG | - | chr5.1:64651758-64651777 | MS.gene29637:intron | 30.0% | |
| TTCTCTGAATATTACGAAAG+AGG | + | chr5.1:64652432-64652451 | None:intergenic | 30.0% | |
| TTTACATGAACTGACTATTG+TGG | - | chr5.1:64650176-64650195 | MS.gene29637:intron | 30.0% | |
| ! | AAAGTTTGTCCTTTTCGAAT+AGG | + | chr5.1:64651613-64651632 | None:intergenic | 30.0% |
| ! | AAGTTTGTCCTTTTCGAATA+GGG | + | chr5.1:64651612-64651631 | None:intergenic | 30.0% |
| ! | AATTTTCATCACCAACAAAC+TGG | + | chr5.1:64650947-64650966 | None:intergenic | 30.0% |
| ! | ATAGGATTTTATCAGTGATC+GGG | + | chr5.1:64653790-64653809 | None:intergenic | 30.0% |
| ! | ATATACCAATGGTTTCGTTT+TGG | - | chr5.1:64653533-64653552 | MS.gene29637:CDS | 30.0% |
| ! | ATTTTCATCACCAACAAACT+GGG | + | chr5.1:64650946-64650965 | None:intergenic | 30.0% |
| ! | GATAGGATTTTATCAGTGAT+CGG | + | chr5.1:64653791-64653810 | None:intergenic | 30.0% |
| ! | GTTGATGTTTTCTATTTTGC+AGG | - | chr5.1:64650038-64650057 | MS.gene29637:intron | 30.0% |
| ! | TATGCTGATATTTTCAGCAA+GGG | - | chr5.1:64650352-64650371 | MS.gene29637:intron | 30.0% |
| ! | TGTTGATAAAAAACGTTACG+AGG | - | chr5.1:64653886-64653905 | MS.gene29637:intron | 30.0% |
| ! | TTCCCTGTGGAAATATTTTT+CGG | - | chr5.1:64653055-64653074 | MS.gene29637:intron | 30.0% |
| !! | AATGGTTTCGTTTTGGATTT+GGG | - | chr5.1:64653540-64653559 | MS.gene29637:CDS | 30.0% |
| !! | AGATTGTGGTTTTTCAAACA+AGG | - | chr5.1:64650423-64650442 | MS.gene29637:intron | 30.0% |
| !! | CAGATTTTAGTCTGATAAGT+AGG | + | chr5.1:64652399-64652418 | None:intergenic | 30.0% |
| !! | GAATATATTTTTATCTGCCC+CGG | + | chr5.1:64649688-64649707 | None:intergenic | 30.0% |
| !! | GGTTTCTGGTTTACTAATTT+AGG | - | chr5.1:64651668-64651687 | MS.gene29637:CDS | 30.0% |
| !! | TATATTCTGGGGGAATTTTA+TGG | - | chr5.1:64649701-64649720 | MS.gene29637:intron | 30.0% |
| !!! | AAAGGTGTTTTGGAAAAAAC+TGG | + | chr5.1:64650079-64650098 | None:intergenic | 30.0% |
| !!! | AGTTTTTTCCAAAACACCTT+TGG | - | chr5.1:64650078-64650097 | MS.gene29637:CDS | 30.0% |
| !!! | ATTTGGGTGTGCATTTTTTA+TGG | - | chr5.1:64650849-64650868 | MS.gene29637:CDS | 30.0% |
| !!! | TCGACTATTTTTACTTCCTA+AGG | - | chr5.1:64651386-64651405 | MS.gene29637:intron | 30.0% |
| AAAAGGACTATGAAAACTGG+GGG | - | chr5.1:64649563-64649582 | MS.gene29637:CDS | 35.0% | |
| AAACAATCAAAACCTCTAGC+AGG | + | chr5.1:64652301-64652320 | None:intergenic | 35.0% | |
| AAAGAAGAAGCTCTTCTCAA+GGG | + | chr5.1:64652178-64652197 | None:intergenic | 35.0% | |
| AAAGAAGGATCTGTCTTCTA+AGG | - | chr5.1:64653346-64653365 | MS.gene29637:intron | 35.0% | |
| AACAAACAAGAATGAGAGGA+AGG | + | chr5.1:64650450-64650469 | None:intergenic | 35.0% | |
| AACGAGTACCACAATTTGTA+TGG | - | chr5.1:64652451-64652470 | MS.gene29637:intron | 35.0% | |
| AATCGGTGGAAAATATCTAC+AGG | - | chr5.1:64653104-64653123 | MS.gene29637:intron | 35.0% | |
| ACGAAATCATTCAGTATGCT+TGG | + | chr5.1:64649415-64649434 | None:intergenic | 35.0% | |
| ACGTAAACATCACAAGAACA+TGG | - | chr5.1:64650329-64650348 | MS.gene29637:intron | 35.0% | |
| AGCAATGCAACATTAAGCAA+AGG | + | chr5.1:64649499-64649518 | None:intergenic | 35.0% | |
| AGGGAAAAATGATGTGATCT+TGG | - | chr5.1:64650675-64650694 | MS.gene29637:CDS | 35.0% | |
| ATAGTTGTGTGCATTTGTTC+TGG | - | chr5.1:64652998-64653017 | MS.gene29637:intron | 35.0% | |
| ATCTCAGAAAGATTCGTTGA+TGG | - | chr5.1:64650890-64650909 | MS.gene29637:CDS | 35.0% | |
| ATGCACACTACTATGTCTTA+TGG | - | chr5.1:64653027-64653046 | MS.gene29637:intron | 35.0% | |
| ATGTAATTGGACATTCAGGA+AGG | + | chr5.1:64649883-64649902 | None:intergenic | 35.0% | |
| ATTACCTGCATCACAATATG+AGG | + | chr5.1:64651640-64651659 | None:intergenic | 35.0% | |
| ATTGGACTTGAACAGTAATG+TGG | - | chr5.1:64650816-64650835 | MS.gene29637:CDS | 35.0% | |
| CAAAATTACTTGGAGAGAAC+TGG | - | chr5.1:64653691-64653710 | MS.gene29637:intron | 35.0% | |
| CAAATCCAAAACGAAACCAT+TGG | + | chr5.1:64653541-64653560 | None:intergenic | 35.0% | |
| CCAAGTAAAATTTGGCAATG+AGG | + | chr5.1:64652496-64652515 | None:intergenic | 35.0% | |
| CTACCGAAAAATATTTCCAC+AGG | + | chr5.1:64653061-64653080 | None:intergenic | 35.0% | |
| CTACTCACGAACAAAATATG+AGG | + | chr5.1:64652755-64652774 | None:intergenic | 35.0% | |
| CTCCTTTACACTTATTCCAA+AGG | + | chr5.1:64650097-64650116 | None:intergenic | 35.0% | |
| CTCTAAGTACAAAGACAGAT+TGG | - | chr5.1:64651803-64651822 | MS.gene29637:intron | 35.0% | |
| CTGAAAATTGGCCATCATTA+AGG | + | chr5.1:64653306-64653325 | None:intergenic | 35.0% | |
| CTGGAAAAAAATGTCAGGTA+TGG | - | chr5.1:64653710-64653729 | MS.gene29637:intron | 35.0% | |
| GAAAACTGGGGGAAAAAAAT+GGG | - | chr5.1:64649574-64649593 | MS.gene29637:CDS | 35.0% | |
| GAGAACTGGAAAAAAATGTC+AGG | - | chr5.1:64653705-64653724 | MS.gene29637:intron | 35.0% | |
| GATGCTGTTGTTACATTTGA+TGG | - | chr5.1:64651116-64651135 | MS.gene29637:CDS | 35.0% | |
| GATGTGTAAATTTGGTACTG+TGG | - | chr5.1:64651948-64651967 | MS.gene29637:CDS | 35.0% | |
| GCAAGATTGTCTATAACCAT+TGG | - | chr5.1:64653589-64653608 | MS.gene29637:intron | 35.0% | |
| GCATACTGAATGATTTCGTT+TGG | - | chr5.1:64649416-64649435 | MS.gene29637:intron | 35.0% | |
| GGAATGACATTATGCGAAAA+TGG | + | chr5.1:64653769-64653788 | None:intergenic | 35.0% | |
| GTTATAGACAATCTTGCAGA+AGG | + | chr5.1:64653586-64653605 | None:intergenic | 35.0% | |
| GTTCAAGTCCAATTTGGATA+AGG | + | chr5.1:64650809-64650828 | None:intergenic | 35.0% | |
| GTTCCAAAGACTAATCAACT+TGG | - | chr5.1:64649793-64649812 | MS.gene29637:CDS | 35.0% | |
| TCAAAAGATGCAGATGAAGA+TGG | - | chr5.1:64653401-64653420 | MS.gene29637:intron | 35.0% | |
| TCTCACAAACTAACCTTCAA+GGG | - | chr5.1:64650656-64650675 | MS.gene29637:CDS | 35.0% | |
| TCTTCATGAGTAACAAGAGT+GGG | + | chr5.1:64652213-64652232 | None:intergenic | 35.0% | |
| TGAAAACTGGGGGAAAAAAA+TGG | - | chr5.1:64649573-64649592 | MS.gene29637:CDS | 35.0% | |
| TGATGCAGGTAATTTCTCAT+GGG | - | chr5.1:64651647-64651666 | MS.gene29637:CDS | 35.0% | |
| TGTAATTGGACATTCAGGAA+GGG | + | chr5.1:64649882-64649901 | None:intergenic | 35.0% | |
| TTAATGACTGGGACTTAGAT+TGG | - | chr5.1:64649989-64650008 | MS.gene29637:intron | 35.0% | |
| TTACCTGCATCACAATATGA+GGG | + | chr5.1:64651639-64651658 | None:intergenic | 35.0% | |
| TTAGAAGACAGATCCTTCTT+TGG | + | chr5.1:64653347-64653366 | None:intergenic | 35.0% | |
| TTCCATTTCAGGAAATATGC+TGG | - | chr5.1:64650585-64650604 | MS.gene29637:CDS | 35.0% | |
| TTCTGACTAGATTGACTATG+TGG | - | chr5.1:64652327-64652346 | MS.gene29637:CDS | 35.0% | |
| TTGACACCTCTTCATATGAT+CGG | - | chr5.1:64649651-64649670 | MS.gene29637:intron | 35.0% | |
| TTGGACTTGAACAGTAATGT+GGG | - | chr5.1:64650817-64650836 | MS.gene29637:CDS | 35.0% | |
| TTTGTTGATATACAACCCTG+AGG | - | chr5.1:64651866-64651885 | MS.gene29637:CDS | 35.0% | |
| ! | AAATTTGTGTTACTCTGCAG+GGG | - | chr5.1:64651279-64651298 | MS.gene29637:intron | 35.0% |
| ! | AATTTTATGGAAGAGACAGG+GGG | - | chr5.1:64649714-64649733 | MS.gene29637:intron | 35.0% |
| ! | AGAAATTTGTGTTACTCTGC+AGG | - | chr5.1:64651277-64651296 | MS.gene29637:intron | 35.0% |
| ! | AGCGTTTGAAATTTCTCCAA+TGG | + | chr5.1:64653608-64653627 | None:intergenic | 35.0% |
| ! | AGTTTGTCCTTTTCGAATAG+GGG | + | chr5.1:64651611-64651630 | None:intergenic | 35.0% |
| ! | ATGCTGATATTTTCAGCAAG+GGG | - | chr5.1:64650353-64650372 | MS.gene29637:intron | 35.0% |
| ! | CCTCATTGCCAAATTTTACT+TGG | - | chr5.1:64652493-64652512 | MS.gene29637:intron | 35.0% |
| ! | CTTTTCTCAAATGGAAAGAG+AGG | - | chr5.1:64653493-64653512 | MS.gene29637:CDS | 35.0% |
| ! | GAAATTTGTGTTACTCTGCA+GGG | - | chr5.1:64651278-64651297 | MS.gene29637:intron | 35.0% |
| ! | GAATCAATATTCATCGGTTG+TGG | + | chr5.1:64653938-64653957 | None:intergenic | 35.0% |
| ! | GAATTTTATGGAAGAGACAG+GGG | - | chr5.1:64649713-64649732 | MS.gene29637:intron | 35.0% |
| ! | GGAATTTTATGGAAGAGACA+GGG | - | chr5.1:64649712-64649731 | MS.gene29637:intron | 35.0% |
| ! | GTATGCTGATATTTTCAGCA+AGG | - | chr5.1:64650351-64650370 | MS.gene29637:intron | 35.0% |
| ! | TAAAATGTTACCTCGGTGTA+AGG | + | chr5.1:64651151-64651170 | None:intergenic | 35.0% |
| ! | TAAAGAAGCAAAGCATCAAG+AGG | + | chr5.1:64650218-64650237 | None:intergenic | 35.0% |
| ! | TATTTCTGACGCCTTAATGA+TGG | - | chr5.1:64653292-64653311 | MS.gene29637:intron | 35.0% |
| ! | TGACAACTCCTAAATTTTCC+AGG | + | chr5.1:64652102-64652121 | None:intergenic | 35.0% |
| ! | TGAGGTAGATTCATTTTCTG+CGG | - | chr5.1:64649301-64649320 | MS.gene29637:CDS | 35.0% |
| ! | TGGGGAGAAGTTGATTTAAA+TGG | - | chr5.1:64650144-64650163 | MS.gene29637:intron | 35.0% |
| ! | TTGGTGTTCAGATCAAAGAA+GGG | - | chr5.1:64649812-64649831 | MS.gene29637:CDS | 35.0% |
| ! | TTTGGCAGGTTTCTGAAAAT+TGG | + | chr5.1:64653318-64653337 | None:intergenic | 35.0% |
| ! | TTTTCAGAAACCTGCCAAAA+AGG | - | chr5.1:64653319-64653338 | MS.gene29637:intron | 35.0% |
| ! | TTTTCCAGGCTTAGTAACTT+TGG | + | chr5.1:64652088-64652107 | None:intergenic | 35.0% |
| !! | AAGAGCATCAATCTTCAGAA+AGG | + | chr5.1:64651488-64651507 | None:intergenic | 35.0% |
| !! | ACACCAAGTTGATTAGTCTT+TGG | + | chr5.1:64649799-64649818 | None:intergenic | 35.0% |
| !! | ATCCTTCTTTGGTTCCTTTT+TGG | + | chr5.1:64653336-64653355 | None:intergenic | 35.0% |
| !! | CAACCGATGAATATTGATTC+AGG | - | chr5.1:64653938-64653957 | MS.gene29637:intron | 35.0% |
| !! | CAATGGTTTCGTTTTGGATT+TGG | - | chr5.1:64653539-64653558 | MS.gene29637:CDS | 35.0% |
| !! | CACCTTTGGAATAAGTGTAA+AGG | - | chr5.1:64650092-64650111 | MS.gene29637:CDS | 35.0% |
| !! | TCACATCATTTTTCCCTTGA+AGG | + | chr5.1:64650672-64650691 | None:intergenic | 35.0% |
| !!! | CACTTATTCCAAAGGTGTTT+TGG | + | chr5.1:64650089-64650108 | None:intergenic | 35.0% |
| AAGAAGAAGCTCTTCTCAAG+GGG | + | chr5.1:64652177-64652196 | None:intergenic | 40.0% | |
| AATTCCAACACCCAGTTTGT+TGG | - | chr5.1:64650933-64650952 | MS.gene29637:intron | 40.0% | |
| ACACTACTATGTCTTATGGC+AGG | - | chr5.1:64653031-64653050 | MS.gene29637:intron | 40.0% | |
| ACATCCGTAAATGAAATCCC+AGG | + | chr5.1:64653669-64653688 | None:intergenic | 40.0% | |
| ACCTGAACATGCAGTTCAAA+GGG | - | chr5.1:64652552-64652571 | MS.gene29637:CDS | 40.0% | |
| ACGGATGTGGCAAAATTACT+TGG | - | chr5.1:64653681-64653700 | MS.gene29637:intron | 40.0% | |
| AGAAGCAACTTTCTGTTAGC+GGG | - | chr5.1:64650115-64650134 | MS.gene29637:CDS | 40.0% | |
| AGATGTAAAGAGTAGAGGTG+AGG | + | chr5.1:64653268-64653287 | None:intergenic | 40.0% | |
| AGCCAGCATATTTCCTGAAA+TGG | + | chr5.1:64650590-64650609 | None:intergenic | 40.0% | |
| AGTTACACCTGTCATTCTTG+CGG | - | chr5.1:64651316-64651335 | MS.gene29637:intron | 40.0% | |
| ATACTGTGGTGAACACTTCA+TGG | + | chr5.1:64652047-64652066 | None:intergenic | 40.0% | |
| ATGAAGAGAAAGACAGCATG+TGG | + | chr5.1:64650485-64650504 | None:intergenic | 40.0% | |
| ATTCACTGGATTTCGTGATC+AGG | - | chr5.1:64649846-64649865 | MS.gene29637:CDS | 40.0% | |
| CACTACTATGTCTTATGGCA+GGG | - | chr5.1:64653032-64653051 | MS.gene29637:intron | 40.0% | |
| CACTCTTGTTACTCATGAAG+AGG | - | chr5.1:64652212-64652231 | MS.gene29637:intron | 40.0% | |
| CAGATTGGAGTTGTCGTATA+AGG | - | chr5.1:64651818-64651837 | MS.gene29637:intron | 40.0% | |
| CATTTCTGTGTTGCATTCAC+AGG | - | chr5.1:64652893-64652912 | MS.gene29637:intron | 40.0% | |
| CTCTTCATGAGTAACAAGAG+TGG | + | chr5.1:64652214-64652233 | None:intergenic | 40.0% | |
| GAAAACACAGGAAAGCGAAA+AGG | + | chr5.1:64652962-64652981 | None:intergenic | 40.0% | |
| GAAAGAAGAAGCTCTTCTCA+AGG | + | chr5.1:64652179-64652198 | None:intergenic | 40.0% | |
| GAGAAGCAACTTTCTGTTAG+CGG | - | chr5.1:64650114-64650133 | MS.gene29637:CDS | 40.0% | |
| GCATCAATCTTCAGAAAGGT+TGG | + | chr5.1:64651484-64651503 | None:intergenic | 40.0% | |
| GGGTTGTTCTACAAATTCAC+TGG | - | chr5.1:64649832-64649851 | MS.gene29637:CDS | 40.0% | |
| GGTAATTTCTCATGGGTTTC+TGG | - | chr5.1:64651654-64651673 | MS.gene29637:CDS | 40.0% | |
| GTCTCACAAACTAACCTTCA+AGG | - | chr5.1:64650655-64650674 | MS.gene29637:CDS | 40.0% | |
| GTGATGCAGGTAATTTCTCA+TGG | - | chr5.1:64651646-64651665 | MS.gene29637:CDS | 40.0% | |
| TACCTGAACATGCAGTTCAA+AGG | - | chr5.1:64652551-64652570 | MS.gene29637:CDS | 40.0% | |
| TCAGTATGCTTGGTTGAGTA+GGG | + | chr5.1:64649405-64649424 | None:intergenic | 40.0% | |
| TGAAGATTGATGCTCTTCTC+TGG | - | chr5.1:64651491-64651510 | MS.gene29637:CDS | 40.0% | |
| TGACACCTCTTCATATGATC+GGG | - | chr5.1:64649652-64649671 | MS.gene29637:intron | 40.0% | |
| TGCCAAAAAGGAACCAAAGA+AGG | - | chr5.1:64653331-64653350 | MS.gene29637:intron | 40.0% | |
| TGGCAACAAACAAGAATGAG+AGG | + | chr5.1:64650454-64650473 | None:intergenic | 40.0% | |
| TGGGATTTCATTTACGGATG+TGG | - | chr5.1:64653668-64653687 | MS.gene29637:intron | 40.0% | |
| TTCAGTATGCTTGGTTGAGT+AGG | + | chr5.1:64649406-64649425 | None:intergenic | 40.0% | |
| TTGAACTGCATGTTCAGGTA+AGG | + | chr5.1:64652551-64652570 | None:intergenic | 40.0% | |
| ! | AATGTGGGCTGTGGTTAATT+TGG | - | chr5.1:64650832-64650851 | MS.gene29637:CDS | 40.0% |
| ! | AGATTCATTTTCTGCGGATC+AGG | - | chr5.1:64649307-64649326 | MS.gene29637:CDS | 40.0% |
| ! | ATGTGGGCTGTGGTTAATTT+GGG | - | chr5.1:64650833-64650852 | MS.gene29637:CDS | 40.0% |
| ! | ATTTTATGGAAGAGACAGGG+GGG | - | chr5.1:64649715-64649734 | MS.gene29637:intron | 40.0% |
| ! | CTAATAACGACGAAGGTATG+TGG | + | chr5.1:64651580-64651599 | None:intergenic | 40.0% |
| ! | GAGGCATCACACGATAATAA+AGG | + | chr5.1:64653249-64653268 | None:intergenic | 40.0% |
| ! | GGGAATTTTATGGAAGAGAC+AGG | - | chr5.1:64649711-64649730 | MS.gene29637:intron | 40.0% |
| ! | GTTTGTCCTTTTCGAATAGG+GGG | + | chr5.1:64651610-64651629 | None:intergenic | 40.0% |
| ! | TCATCTCTGAAAGCTGAAGA+TGG | - | chr5.1:64652141-64652160 | MS.gene29637:CDS | 40.0% |
| ! | TTTGTCCTTTTCGAATAGGG+GGG | + | chr5.1:64651609-64651628 | None:intergenic | 40.0% |
| ! | TTTTCTGCGGATCAGGTTTT+TGG | - | chr5.1:64649314-64649333 | MS.gene29637:CDS | 40.0% |
| !! | AATATGCTGGCTTTCATGGT+TGG | - | chr5.1:64650598-64650617 | MS.gene29637:CDS | 40.0% |
| !! | ACAAACTGGGTGTTGGAATT+CGG | + | chr5.1:64650933-64650952 | None:intergenic | 40.0% |
| !! | AGGAAATATGCTGGCTTTCA+TGG | - | chr5.1:64650594-64650613 | MS.gene29637:CDS | 40.0% |
| !! | CTTGGTGTTCAGATCAAAGA+AGG | - | chr5.1:64649811-64649830 | MS.gene29637:CDS | 40.0% |
| !! | TATTACGAAAGAGGTGCTCT+TGG | + | chr5.1:64652423-64652442 | None:intergenic | 40.0% |
| !! | TTCTTTGGTTCCTTTTTGGC+AGG | + | chr5.1:64653332-64653351 | None:intergenic | 40.0% |
| AATCCAGACATTCCCCTCTT+GGG | + | chr5.1:64653467-64653486 | None:intergenic | 45.0% | |
| ACAACCCCGATCATATGAAG+AGG | + | chr5.1:64649660-64649679 | None:intergenic | 45.0% | |
| ACTGGGACTTAGATTGGCAT+TGG | - | chr5.1:64649995-64650014 | MS.gene29637:intron | 45.0% | |
| AGACAAGCCACGTAATACTG+TGG | + | chr5.1:64652061-64652080 | None:intergenic | 45.0% | |
| AGTTTGTAACAGCTTGCAGC+TGG | - | chr5.1:64650769-64650788 | MS.gene29637:intron | 45.0% | |
| ATCACCAACAAACTGGGTGT+TGG | + | chr5.1:64650940-64650959 | None:intergenic | 45.0% | |
| ATGATCGGGGTTGTAGAATC+CGG | - | chr5.1:64649666-64649685 | MS.gene29637:intron | 45.0% | |
| CCTCTTTCTCATCACCACTT+TGG | + | chr5.1:64653206-64653225 | None:intergenic | 45.0% | |
| GACACCTCTTCATATGATCG+GGG | - | chr5.1:64649653-64649672 | MS.gene29637:intron | 45.0% | |
| GATACATACAGCCAGTTGAC+AGG | + | chr5.1:64651543-64651562 | None:intergenic | 45.0% | |
| GATTCTGATGCTAGCCAAAG+TGG | - | chr5.1:64653189-64653208 | MS.gene29637:CDS | 45.0% | |
| GCATATTCGACTCCTTCCTA+TGG | + | chr5.1:64649472-64649491 | None:intergenic | 45.0% | |
| GGTCTCCTACTGATGATTCT+GGG | - | chr5.1:64653160-64653179 | MS.gene29637:CDS | 45.0% | |
| GTAACAAGAGTGGGAGGTTT+AGG | + | chr5.1:64652204-64652223 | None:intergenic | 45.0% | |
| GTACCCTCATATTGTGATGC+AGG | - | chr5.1:64651633-64651652 | MS.gene29637:CDS | 45.0% | |
| GTATTGCAATCCTTACACCG+AGG | - | chr5.1:64651138-64651157 | MS.gene29637:CDS | 45.0% | |
| GTCGAACTACACTGCTATAC+TGG | + | chr5.1:64651371-64651390 | None:intergenic | 45.0% | |
| GTCGAGACTAATAACGACGA+AGG | + | chr5.1:64651587-64651606 | None:intergenic | 45.0% | |
| GTCTCCTACTGATGATTCTG+GGG | - | chr5.1:64653161-64653180 | MS.gene29637:CDS | 45.0% | |
| GTGTGTTGAATGTACAGCTG+AGG | - | chr5.1:64653835-64653854 | MS.gene29637:intron | 45.0% | |
| GTGTTCACCACAGTATTACG+TGG | - | chr5.1:64652051-64652070 | MS.gene29637:intron | 45.0% | |
| TCATGAGTAACAAGAGTGGG+AGG | + | chr5.1:64652210-64652229 | None:intergenic | 45.0% | |
| TGAAGACTTCGTTGCCGAAA+AGG | - | chr5.1:64653128-64653147 | MS.gene29637:CDS | 45.0% | |
| TGAAGATGAAAGTGACGAGG+AGG | - | chr5.1:64652692-64652711 | MS.gene29637:intron | 45.0% | |
| TGAATGTACAGCTGAGGAGA+AGG | - | chr5.1:64653841-64653860 | MS.gene29637:intron | 45.0% | |
| TGACAACTTCTCCTGTCAAC+TGG | - | chr5.1:64651529-64651548 | MS.gene29637:intron | 45.0% | |
| TGCATGATATCACCTGCTAG+AGG | - | chr5.1:64652286-64652305 | MS.gene29637:intron | 45.0% | |
| TGGTGAAGATGAAAGTGACG+AGG | - | chr5.1:64652689-64652708 | MS.gene29637:intron | 45.0% | |
| TGGTTGAGTAGGGTTAAGAC+TGG | + | chr5.1:64649395-64649414 | None:intergenic | 45.0% | |
| TGTGATCTTGGAGTTCCATG+TGG | - | chr5.1:64650687-64650706 | MS.gene29637:CDS | 45.0% | |
| TTCCATGTGGATGACACAAC+TGG | - | chr5.1:64650700-64650719 | MS.gene29637:intron | 45.0% | |
| TTGCCGAAAAGGACGATGAA+GGG | - | chr5.1:64653139-64653158 | MS.gene29637:CDS | 45.0% | |
| TTTCTGATGCGCTCAAGATG+TGG | + | chr5.1:64652663-64652682 | None:intergenic | 45.0% | |
| ! | ACAGTATTACGTGGCTTGTC+TGG | - | chr5.1:64652060-64652079 | MS.gene29637:intron | 45.0% |
| ! | AGACCCTTCATCGTCCTTTT+CGG | + | chr5.1:64653145-64653164 | None:intergenic | 45.0% |
| ! | AGCAGAGAGAGCTTGTTTGA+TGG | - | chr5.1:64650505-64650524 | MS.gene29637:intron | 45.0% |
| ! | AGCTTTCGAAGTGCCTTTAG+CGG | - | chr5.1:64650630-64650649 | MS.gene29637:CDS | 45.0% |
| ! | AGTATTACGTGGCTTGTCTG+GGG | - | chr5.1:64652062-64652081 | MS.gene29637:intron | 45.0% |
| ! | ATTTTCCCAAGCATCCCTCA+AGG | + | chr5.1:64651899-64651918 | None:intergenic | 45.0% |
| ! | CAGTATTACGTGGCTTGTCT+GGG | - | chr5.1:64652061-64652080 | MS.gene29637:intron | 45.0% |
| ! | CCAAAGTGGTGATGAGAAAG+AGG | - | chr5.1:64653203-64653222 | MS.gene29637:intron | 45.0% |
| ! | TTGAACAGTAATGTGGGCTG+TGG | - | chr5.1:64650823-64650842 | MS.gene29637:CDS | 45.0% |
| !! | GGGTGTTGGAATTCGGTATA+TGG | + | chr5.1:64650926-64650945 | None:intergenic | 45.0% |
| !! | TCGTTTTGGATTTGGGTGTG+TGG | - | chr5.1:64653547-64653566 | MS.gene29637:CDS | 45.0% |
| AACAAACTCACCTGAGCAGG+TGG | + | chr5.1:64650972-64650991 | None:intergenic | 50.0% | |
| ACAAACTCACCTGAGCAGGT+GGG | + | chr5.1:64650971-64650990 | None:intergenic | 50.0% | |
| ACCAACTACTGGTGTGGCTA+AGG | - | chr5.1:64652605-64652624 | MS.gene29637:CDS | 50.0% | |
| ACCTTAGCCACACCAGTAGT+TGG | + | chr5.1:64652609-64652628 | None:intergenic | 50.0% | |
| AGAGAAAGACAGCATGTGGC+TGG | + | chr5.1:64650481-64650500 | None:intergenic | 50.0% | |
| AGCCACACCAGTAGTTGGTT+GGG | + | chr5.1:64652604-64652623 | None:intergenic | 50.0% | |
| AGGATCCAAATGCACCCAAG+AGG | - | chr5.1:64653450-64653469 | MS.gene29637:CDS | 50.0% | |
| AGTGAGCGTGACATGGATGA+AGG | - | chr5.1:64649771-64649790 | MS.gene29637:CDS | 50.0% | |
| ATAATGTCTGTGGCCGACGT+TGG | - | chr5.1:64651080-64651099 | MS.gene29637:CDS | 50.0% | |
| ATTCCCCTCTTGGGTGCATT+TGG | + | chr5.1:64653458-64653477 | None:intergenic | 50.0% | |
| ATTCTTGCGGCTTCAAGGAC+AGG | - | chr5.1:64651329-64651348 | MS.gene29637:intron | 50.0% | |
| CTCCAGTTGTGTCATCCACA+TGG | + | chr5.1:64650705-64650724 | None:intergenic | 50.0% | |
| CTGACATAGTGAGCGTGACA+TGG | - | chr5.1:64649764-64649783 | MS.gene29637:CDS | 50.0% | |
| CTGTCATTCTTGCGGCTTCA+AGG | - | chr5.1:64651324-64651343 | MS.gene29637:intron | 50.0% | |
| CTGTTCCTTGAGGGATGCTT+GGG | - | chr5.1:64651891-64651910 | MS.gene29637:CDS | 50.0% | |
| CTTGAAGCCGCAAGAATGAC+AGG | + | chr5.1:64651326-64651345 | None:intergenic | 50.0% | |
| GAATCCAGACATTCCCCTCT+TGG | + | chr5.1:64653468-64653487 | None:intergenic | 50.0% | |
| GAATTTGAGCGACATGCTGC+TGG | - | chr5.1:64652349-64652368 | MS.gene29637:CDS | 50.0% | |
| GAGCGCATCAGAAATGAAGC+TGG | - | chr5.1:64652669-64652688 | MS.gene29637:intron | 50.0% | |
| GATCCAAATGCACCCAAGAG+GGG | - | chr5.1:64653452-64653471 | MS.gene29637:CDS | 50.0% | |
| GCCCTTTGAACTGCATGTTC+AGG | + | chr5.1:64652556-64652575 | None:intergenic | 50.0% | |
| GGATCCAAATGCACCCAAGA+GGG | - | chr5.1:64653451-64653470 | MS.gene29637:CDS | 50.0% | |
| GGGTCTCCTACTGATGATTC+TGG | - | chr5.1:64653159-64653178 | MS.gene29637:CDS | 50.0% | |
| GGTGTGGCTAAGGTTCTTGA+GGG | - | chr5.1:64652615-64652634 | MS.gene29637:CDS | 50.0% | |
| GTGAACAAACTCACCTGAGC+AGG | + | chr5.1:64650975-64650994 | None:intergenic | 50.0% | |
| GTTGCCGAAAAGGACGATGA+AGG | - | chr5.1:64653138-64653157 | MS.gene29637:CDS | 50.0% | |
| GTTTGTGAGACGTCCGCTAA+AGG | + | chr5.1:64650646-64650665 | None:intergenic | 50.0% | |
| TAGCCACACCAGTAGTTGGT+TGG | + | chr5.1:64652605-64652624 | None:intergenic | 50.0% | |
| TCTGCCCCAGAATCATCAGT+AGG | + | chr5.1:64653168-64653187 | None:intergenic | 50.0% | |
| TGAAAATTGCCCACCTGCTC+AGG | - | chr5.1:64650959-64650978 | MS.gene29637:intron | 50.0% | |
| TGACACAACTGGAGCCAATG+AGG | - | chr5.1:64650711-64650730 | MS.gene29637:intron | 50.0% | |
| TGATCGGGGTTGTAGAATCC+GGG | - | chr5.1:64649667-64649686 | MS.gene29637:intron | 50.0% | |
| TGGTGTGGCTAAGGTTCTTG+AGG | - | chr5.1:64652614-64652633 | MS.gene29637:CDS | 50.0% | |
| TTCACCTCCAACACCAACGT+CGG | + | chr5.1:64651096-64651115 | None:intergenic | 50.0% | |
| ! | CTCAGGTGAGTTTGTTCACG+AGG | - | chr5.1:64650976-64650995 | MS.gene29637:intron | 50.0% |
| ! | TTCTGTTAGCGGGCGCAATT+GGG | - | chr5.1:64650125-64650144 | MS.gene29637:CDS | 50.0% |
| ! | TTTCTGTTAGCGGGCGCAAT+TGG | - | chr5.1:64650124-64650143 | MS.gene29637:CDS | 50.0% |
| ACACGAGCCTTTGCCTCGTA+TGG | + | chr5.1:64653869-64653888 | None:intergenic | 55.0% | |
| CCTCAAGGAACAGCACCTCA+GGG | + | chr5.1:64651884-64651903 | None:intergenic | 55.0% | |
| CTCGACCCCCCTATTCGAAA+AGG | - | chr5.1:64651601-64651620 | MS.gene29637:intron | 55.0% | |
| GAAGGAGCCATACGAGGCAA+AGG | - | chr5.1:64653859-64653878 | MS.gene29637:intron | 55.0% | |
| GATCGGGGTTGTAGAATCCG+GGG | - | chr5.1:64649668-64649687 | MS.gene29637:intron | 55.0% | |
| GCTGTTCCTTGAGGGATGCT+TGG | - | chr5.1:64651890-64651909 | MS.gene29637:CDS | 55.0% | |
| GGAGATGCCCAACCAACTAC+TGG | - | chr5.1:64652594-64652613 | MS.gene29637:CDS | 55.0% | |
| GGGGCCAAAGTTACTAAGCC+TGG | - | chr5.1:64652081-64652100 | MS.gene29637:intron | 55.0% | |
| TCTTATGGCAGGGTTCCCTG+TGG | - | chr5.1:64653042-64653061 | MS.gene29637:intron | 55.0% | |
| TGAGGAGAAGGAGCCATACG+AGG | - | chr5.1:64653853-64653872 | MS.gene29637:intron | 55.0% | |
| TGCCCAACCAACTACTGGTG+TGG | - | chr5.1:64652599-64652618 | MS.gene29637:CDS | 55.0% | |
| TTATGGAAGAGACAGGGGGG+TGG | - | chr5.1:64649718-64649737 | MS.gene29637:intron | 55.0% | |
| TTGAGCGACATGCTGCTGGT+GGG | - | chr5.1:64652353-64652372 | MS.gene29637:CDS | 55.0% | |
| TTTGAGCGACATGCTGCTGG+TGG | - | chr5.1:64652352-64652371 | MS.gene29637:CDS | 55.0% | |
| ! | TCTGTTAGCGGGCGCAATTG+GGG | - | chr5.1:64650126-64650145 | MS.gene29637:CDS | 55.0% |
| !! | CCTGAGGTGCTGTTCCTTGA+GGG | - | chr5.1:64651882-64651901 | MS.gene29637:CDS | 55.0% |
| CCCTCAAGGAACAGCACCTC+AGG | + | chr5.1:64651885-64651904 | None:intergenic | 60.0% | |
| GACAGCATGTGGCTGGCAAG+TGG | + | chr5.1:64650474-64650493 | None:intergenic | 60.0% | |
| GCACCCAAGAGGGGAATGTC+TGG | - | chr5.1:64653461-64653480 | MS.gene29637:CDS | 60.0% | |
| TCTGTGGCCGACGTTGGTGT+TGG | - | chr5.1:64651086-64651105 | MS.gene29637:CDS | 60.0% | |
| !! | CCCTGAGGTGCTGTTCCTTG+AGG | - | chr5.1:64651881-64651900 | MS.gene29637:CDS | 60.0% |
| !! | GTGGCCGACGTTGGTGTTGG+AGG | - | chr5.1:64651089-64651108 | MS.gene29637:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 64649290 | 64653982 | 64649290 | ID=MS.gene29637 |
| chr5.1 | mRNA | 64649290 | 64653982 | 64649290 | ID=MS.gene29637.t1;Parent=MS.gene29637 |
| chr5.1 | exon | 64653968 | 64653982 | 64653968 | ID=MS.gene29637.t1.exon1;Parent=MS.gene29637.t1 |
| chr5.1 | CDS | 64653968 | 64653982 | 64653968 | ID=cds.MS.gene29637.t1;Parent=MS.gene29637.t1 |
| chr5.1 | exon | 64653405 | 64653590 | 64653405 | ID=MS.gene29637.t1.exon2;Parent=MS.gene29637.t1 |
| chr5.1 | CDS | 64653405 | 64653590 | 64653405 | ID=cds.MS.gene29637.t1;Parent=MS.gene29637.t1 |
| chr5.1 | exon | 64653107 | 64653212 | 64653107 | ID=MS.gene29637.t1.exon3;Parent=MS.gene29637.t1 |
| chr5.1 | CDS | 64653107 | 64653212 | 64653107 | ID=cds.MS.gene29637.t1;Parent=MS.gene29637.t1 |
| chr5.1 | exon | 64652540 | 64652676 | 64652540 | ID=MS.gene29637.t1.exon4;Parent=MS.gene29637.t1 |
| chr5.1 | CDS | 64652540 | 64652676 | 64652540 | ID=cds.MS.gene29637.t1;Parent=MS.gene29637.t1 |
| chr5.1 | exon | 64652292 | 64652375 | 64652292 | ID=MS.gene29637.t1.exon5;Parent=MS.gene29637.t1 |
| chr5.1 | CDS | 64652292 | 64652375 | 64652292 | ID=cds.MS.gene29637.t1;Parent=MS.gene29637.t1 |
| chr5.1 | exon | 64652113 | 64652207 | 64652113 | ID=MS.gene29637.t1.exon6;Parent=MS.gene29637.t1 |
| chr5.1 | CDS | 64652113 | 64652207 | 64652113 | ID=cds.MS.gene29637.t1;Parent=MS.gene29637.t1 |
| chr5.1 | exon | 64651865 | 64651973 | 64651865 | ID=MS.gene29637.t1.exon7;Parent=MS.gene29637.t1 |
| chr5.1 | CDS | 64651865 | 64651973 | 64651865 | ID=cds.MS.gene29637.t1;Parent=MS.gene29637.t1 |
| chr5.1 | exon | 64651618 | 64651704 | 64651618 | ID=MS.gene29637.t1.exon8;Parent=MS.gene29637.t1 |
| chr5.1 | CDS | 64651618 | 64651704 | 64651618 | ID=cds.MS.gene29637.t1;Parent=MS.gene29637.t1 |
| chr5.1 | exon | 64651433 | 64651525 | 64651433 | ID=MS.gene29637.t1.exon9;Parent=MS.gene29637.t1 |
| chr5.1 | CDS | 64651433 | 64651525 | 64651433 | ID=cds.MS.gene29637.t1;Parent=MS.gene29637.t1 |
| chr5.1 | exon | 64651039 | 64651236 | 64651039 | ID=MS.gene29637.t1.exon10;Parent=MS.gene29637.t1 |
| chr5.1 | CDS | 64651039 | 64651236 | 64651039 | ID=cds.MS.gene29637.t1;Parent=MS.gene29637.t1 |
| chr5.1 | exon | 64650790 | 64650935 | 64650790 | ID=MS.gene29637.t1.exon11;Parent=MS.gene29637.t1 |
| chr5.1 | CDS | 64650790 | 64650935 | 64650790 | ID=cds.MS.gene29637.t1;Parent=MS.gene29637.t1 |
| chr5.1 | exon | 64650559 | 64650706 | 64650559 | ID=MS.gene29637.t1.exon12;Parent=MS.gene29637.t1 |
| chr5.1 | CDS | 64650559 | 64650706 | 64650559 | ID=cds.MS.gene29637.t1;Parent=MS.gene29637.t1 |
| chr5.1 | exon | 64650048 | 64650146 | 64650048 | ID=MS.gene29637.t1.exon13;Parent=MS.gene29637.t1 |
| chr5.1 | CDS | 64650048 | 64650146 | 64650048 | ID=cds.MS.gene29637.t1;Parent=MS.gene29637.t1 |
| chr5.1 | exon | 64649758 | 64649946 | 64649758 | ID=MS.gene29637.t1.exon14;Parent=MS.gene29637.t1 |
| chr5.1 | CDS | 64649758 | 64649946 | 64649758 | ID=cds.MS.gene29637.t1;Parent=MS.gene29637.t1 |
| chr5.1 | exon | 64649546 | 64649624 | 64649546 | ID=MS.gene29637.t1.exon15;Parent=MS.gene29637.t1 |
| chr5.1 | CDS | 64649546 | 64649624 | 64649546 | ID=cds.MS.gene29637.t1;Parent=MS.gene29637.t1 |
| chr5.1 | exon | 64649290 | 64649420 | 64649290 | ID=MS.gene29637.t1.exon16;Parent=MS.gene29637.t1 |
| chr5.1 | CDS | 64649290 | 64649420 | 64649290 | ID=cds.MS.gene29637.t1;Parent=MS.gene29637.t1 |
| Gene Sequence |
| Protein sequence |
