AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene31685

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene31685.t1 MTR_1g007180 96.476 454 16 0 2 455 4 457 0.0 904
MS.gene31685.t1 MTR_1g007240 86.564 454 61 0 2 455 4 457 0.0 819
MS.gene31685.t1 MTR_2g031750 80.659 455 88 0 1 455 3 457 0.0 779
MS.gene31685.t1 MTR_3g110420 68.860 456 140 1 2 455 16 471 0.0 673
MS.gene31685.t1 MTR_2g031750 80.570 386 75 0 70 455 5 390 0.0 660
MS.gene31685.t1 MTR_1g007180 95.710 303 13 0 153 455 71 373 0.0 597
MS.gene31685.t1 MTR_1g007270 57.395 453 184 4 4 454 27 472 0.0 548
MS.gene31685.t1 MTR_3g110420 69.497 318 95 1 2 317 16 333 3.50e-167 474
MS.gene31685.t1 MTR_3g110430 52.308 455 211 3 2 454 55 505 1.38e-164 474
MS.gene31685.t1 MTR_1g007380 48.246 456 232 3 4 455 17 472 7.26e-164 471
MS.gene31685.t1 MTR_3g110660 47.484 457 234 4 4 455 27 482 2.28e-163 469
MS.gene31685.t1 MTR_1g105980 48.238 454 231 3 2 451 14 467 1.31e-161 465
MS.gene31685.t1 MTR_8g094290 47.357 454 232 4 1 451 22 471 2.95e-158 456
MS.gene31685.t1 MTR_1g105995 48.018 454 232 3 2 451 13 466 5.47e-156 450
MS.gene31685.t1 MTR_1g106000 47.912 455 224 4 10 451 15 469 1.08e-155 450
MS.gene31685.t1 MTR_1g105990 48.539 445 222 4 1 438 12 456 1.67e-154 447
MS.gene31685.t1 MTR_3g088455 48.009 452 227 4 4 451 28 475 2.92e-153 444
MS.gene31685.t1 MTR_1g029750 47.345 452 233 3 4 451 29 479 5.22e-153 443
MS.gene31685.t1 MTR_3g088475 47.903 453 227 5 4 451 28 476 1.95e-151 439
MS.gene31685.t1 MTR_3g096830 49.220 449 223 3 4 451 20 464 2.11e-151 439
MS.gene31685.t1 MTR_3g096800 46.120 451 238 3 4 452 27 474 1.25e-149 434
MS.gene31685.t1 MTR_3g096840 45.575 452 239 4 4 452 33 480 7.33e-147 427
MS.gene31685.t1 MTR_4g073520 44.956 456 243 3 4 451 53 508 3.52e-145 424
MS.gene31685.t1 MTR_4g073520 44.956 456 243 3 4 451 53 508 4.37e-145 424
MS.gene31685.t1 MTR_3g461470 41.950 441 250 3 4 441 17 454 8.15e-131 386
MS.gene31685.t1 MTR_3g461440 41.387 447 255 4 4 446 17 460 8.61e-131 386
MS.gene31685.t1 MTR_5g096840 42.404 441 246 5 10 445 29 466 2.05e-125 372
MS.gene31685.t1 MTR_3g061390 40.991 444 252 4 4 440 17 457 2.55e-125 372
MS.gene31685.t1 MTR_3g461430 40.590 441 250 6 7 441 27 461 2.07e-121 363
MS.gene31685.t1 MTR_3g110660 52.997 317 144 3 4 316 27 342 3.24e-120 356
MS.gene31685.t1 MTR_3g461480 41.629 442 251 4 4 441 21 459 1.17e-119 357
MS.gene31685.t1 MTR_3g088465 45.278 360 190 4 4 359 28 384 1.18e-110 333
MS.gene31685.t1 MTR_5g096850 37.978 445 269 4 1 441 16 457 8.14e-108 327
MS.gene31685.t1 MTR_3g461440 38.820 322 190 4 129 446 5 323 6.84e-86 266
MS.gene31685.t1 MTR_5g017200 47.036 253 122 4 2 254 24 264 6.08e-71 226
MS.gene31685.t1 MTR_1g007190 46.154 221 81 5 20 240 20 202 2.74e-56 185
MS.gene31685.t1 MTR_6g022790 26.667 435 274 12 9 437 41 436 1.15e-39 148
MS.gene31685.t1 MTR_4g103890 25.056 443 283 11 1 435 1 402 3.14e-36 138
MS.gene31685.t1 MTR_2g101920 26.478 423 253 10 9 416 46 425 5.77e-36 138
MS.gene31685.t1 MTR_1g070470 24.342 456 305 11 3 451 15 437 2.12e-33 131
MS.gene31685.t1 MTR_3g005740 27.840 449 291 12 8 452 50 469 2.56e-33 131
MS.gene31685.t1 MTR_8g080120 24.835 455 291 14 9 452 22 436 8.09e-32 126
MS.gene31685.t1 MTR_5g054730 26.478 423 269 12 1 416 16 403 1.00e-29 120
MS.gene31685.t1 MTR_2g096830 27.034 381 234 12 2 374 6 350 2.19e-29 119
MS.gene31685.t1 MTR_7g038910 28.528 326 204 9 9 326 29 333 2.87e-29 118
MS.gene31685.t1 MTR_2g096830 27.928 333 211 9 2 326 6 317 3.62e-29 117
MS.gene31685.t1 MTR_7g038910 28.528 326 204 9 9 326 29 333 5.59e-29 117
MS.gene31685.t1 MTR_1g093030 25.551 454 293 10 6 451 20 436 6.17e-29 118
MS.gene31685.t1 MTR_7g038910 28.528 326 204 9 9 326 29 333 1.22e-28 117
MS.gene31685.t1 MTR_6g022780 25.676 444 272 12 1 429 1 401 2.28e-28 116
MS.gene31685.t1 MTR_3g085820 27.160 324 211 9 9 326 32 336 4.60e-28 115
MS.gene31685.t1 MTR_6g023065 26.220 328 209 7 9 326 49 353 8.65e-28 115
MS.gene31685.t1 MTR_6g023075 25.065 387 237 11 2 374 3 350 1.44e-27 114
MS.gene31685.t1 MTR_1g093020 26.888 331 216 9 2 326 17 327 2.54e-27 113
MS.gene31685.t1 MTR_1g093020 25.822 426 264 11 2 416 17 401 4.88e-27 113
MS.gene31685.t1 MTR_0531s0020 25.688 327 216 8 8 327 47 353 6.60e-27 111
MS.gene31685.t1 MTR_8g099320 23.110 463 312 13 2 451 16 447 4.10e-22 99.0
MS.gene31685.t1 MTR_4g075750 23.937 447 304 11 10 444 70 492 4.71e-21 95.9
MS.gene31685.t1 MTR_4g055610 24.163 418 261 13 2 400 28 408 1.31e-20 94.4
MS.gene31685.t1 MTR_3g115090 23.377 462 290 17 2 438 73 495 3.31e-18 87.4
MS.gene31685.t1 MTR_1g492640 24.449 454 277 19 21 452 70 479 6.16e-17 83.2
MS.gene31685.t1 MTR_5g081630 22.381 420 282 11 38 452 1 381 1.19e-14 75.9
MS.gene31685.t1 MTR_5g023260 23.714 447 294 15 10 441 107 521 4.83e-14 74.7
MS.gene31685.t1 MTR_5g023240 22.944 462 304 15 10 454 86 512 1.01e-12 70.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene31685.t1 AT1G10010 52.993 451 209 2 4 451 22 472 1.13e-176 503
MS.gene31685.t1 AT1G10010 52.993 451 209 2 4 451 21 471 1.17e-176 503
MS.gene31685.t1 AT1G58360 51.885 451 214 2 4 451 30 480 4.75e-176 502
MS.gene31685.t1 AT5G49630 50.110 453 221 4 4 451 26 478 2.53e-164 472
MS.gene31685.t1 AT1G77380 49.002 451 226 3 4 451 23 472 6.62e-160 461
MS.gene31685.t1 AT1G44100 46.272 456 237 3 4 451 21 476 1.20e-151 440
MS.gene31685.t1 AT5G63850 46.035 454 236 6 4 451 12 462 1.71e-150 436
MS.gene31685.t1 AT5G09220 44.934 454 241 6 4 451 39 489 2.14e-149 434
MS.gene31685.t1 AT5G23810 44.836 426 224 5 3 420 18 440 1.70e-122 365
MS.gene31685.t1 AT5G23810 46.364 330 169 4 3 327 18 344 1.55e-96 295
MS.gene31685.t1 AT5G23810 45.643 241 125 3 3 240 18 255 2.43e-65 211
MS.gene31685.t1 AT5G23810 49.485 194 95 2 3 193 18 211 2.22e-57 189
MS.gene31685.t1 AT5G23810 49.485 194 95 2 3 193 18 211 2.22e-57 189
MS.gene31685.t1 AT5G40780 28.604 437 263 13 9 437 32 427 3.80e-39 147
MS.gene31685.t1 AT1G48640 26.991 452 285 12 9 452 39 453 2.87e-38 144
MS.gene31685.t1 AT5G40780 28.810 420 250 13 26 437 1 379 1.82e-35 136
MS.gene31685.t1 AT5G40780 28.810 420 250 13 26 437 1 379 1.82e-35 136
MS.gene31685.t1 AT1G24400 26.419 458 280 11 9 452 27 441 1.15e-33 132
MS.gene31685.t1 AT1G71680 26.562 448 293 9 9 452 33 448 2.49e-30 122
MS.gene31685.t1 AT3G01760 24.107 448 296 11 9 447 30 442 2.87e-29 119
MS.gene31685.t1 AT1G67640 24.890 454 292 12 9 452 27 441 9.80e-29 118
MS.gene31685.t1 AT1G71680 28.571 322 210 7 9 326 33 338 2.10e-28 115
MS.gene31685.t1 AT1G61270 23.490 447 300 12 9 449 32 442 6.30e-28 115
MS.gene31685.t1 AT1G25530 25.164 457 301 11 2 452 19 440 4.15e-27 113
MS.gene31685.t1 AT1G08230 25.373 469 278 16 10 452 27 449 1.14e-20 94.7
MS.gene31685.t1 AT5G41800 22.747 466 309 12 4 452 16 447 2.07e-20 94.0
MS.gene31685.t1 AT3G55740 23.278 421 277 12 38 452 1 381 1.10e-18 87.8
MS.gene31685.t1 AT3G55740 23.278 421 277 12 38 452 1 381 1.10e-18 87.8
MS.gene31685.t1 AT3G55740 23.278 421 277 12 38 452 57 437 1.24e-18 88.2
MS.gene31685.t1 AT1G08230 28.000 325 185 13 146 452 37 330 1.40e-14 75.1
MS.gene31685.t1 AT1G08230 28.000 325 185 13 146 452 37 330 1.40e-14 75.1
MS.gene31685.t1 AT1G08230 28.000 325 185 13 146 452 37 330 1.40e-14 75.1
MS.gene31685.t1 AT1G08230 28.000 325 185 13 146 452 56 349 1.92e-14 74.7
MS.gene31685.t1 AT2G39890 21.986 423 280 15 38 452 60 440 6.97e-14 73.9
MS.gene31685.t1 AT2G39890 21.986 423 280 15 38 452 60 440 6.97e-14 73.9
MS.gene31685.t1 AT2G39890 21.986 423 280 15 38 452 1 381 1.02e-13 72.8

Find 94 sgRNAs with CRISPR-Local

Find 218 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAACTTGTTTAGGTTAATT+TGG 0.199749 1.1:+12253262 MS.gene31685:CDS
AATCCCTACATGATCGGTTT+TGG 0.237586 1.1:+12251917 MS.gene31685:CDS
CAATCAATTTGAACTTGTTT+AGG 0.255382 1.1:+12253253 MS.gene31685:CDS
TGCCTTGGCTATGCTGCTTT+TGG 0.276773 1.1:+12252617 MS.gene31685:CDS
AGCATAACCGGAACACAAAT+AGG 0.277840 1.1:+12252298 MS.gene31685:CDS
TTCTCTGCAGCAGTTAGTTC+TGG 0.283344 1.1:-12252322 None:intergenic
CTGTTGGGAGCGATTGGATT+TGG 0.293303 1.1:+12253354 MS.gene31685:CDS
CCACATGATTGGAGCATATC+AGG 0.303203 1.1:+12252721 MS.gene31685:CDS
TGAGCAATATGCATTTGTAT+AGG 0.308548 1.1:-12253396 None:intergenic
TTCTGGCCCTATTTGTGTTC+CGG 0.312048 1.1:-12252305 None:intergenic
TCTTTGTATGGTTGTCTCAT+TGG 0.316701 1.1:+12253473 MS.gene31685:CDS
GAGCAATATGCATTTGTATA+GGG 0.353394 1.1:-12253395 None:intergenic
AAGGTACATACCAGTTCTTT+TGG 0.354167 1.1:-12249852 None:intergenic
GAGGACGATATTTGTGATAC+TGG 0.356513 1.1:+12253284 MS.gene31685:CDS
CAGGGGTGTTGGCTCTAGCA+TGG 0.361926 1.1:+12250857 MS.gene31685:CDS
TACTGTTATTTACGACATAA+TGG 0.366442 1.1:+12252399 MS.gene31685:CDS
CCATGTCAGTTTGTGAAAGT+TGG 0.389481 1.1:-12251969 None:intergenic
TGTAGTAGGGGCAGGGGTGT+TGG 0.391643 1.1:+12250846 MS.gene31685:CDS
TGTCTTAGTGTACTTATCTC+AGG 0.412282 1.1:+12252049 MS.gene31685:CDS
GTCTTGTAGCTGATTGCTAT+AGG 0.413676 1.1:+12250956 MS.gene31685:CDS
CAATCAATTTCTAGCTCTGT+TGG 0.414936 1.1:+12253338 MS.gene31685:CDS
GGGGCATCTACCAGCATAAC+CGG 0.419402 1.1:+12252286 MS.gene31685:CDS
TCCAAGGGCTACTATCCAAT+AGG 0.424071 1.1:-12252681 None:intergenic
ATGAAAAGGGCCAATGTGAC+AGG 0.425494 1.1:+12252557 MS.gene31685:CDS
ATTGCCGCTATCACCTCGTT+TGG 0.429141 1.1:+12252001 MS.gene31685:CDS
CATGTCAGTTTGTGAAAGTT+GGG 0.432632 1.1:-12251968 None:intergenic
CAAGCTGTCAAGAGCTACTT+AGG 0.436812 1.1:+12251021 MS.gene31685:CDS
AGGGGTGTTGGCTCTAGCAT+GGG 0.441108 1.1:+12250858 MS.gene31685:CDS
CAGAAAATAAACAAATGAAA+AGG 0.441906 1.1:+12252543 MS.gene31685:CDS
CATATCATAACAGTTGTAGT+AGG 0.450490 1.1:+12250832 MS.gene31685:CDS
AATCAATTTCTAGCTCTGTT+GGG 0.451943 1.1:+12253339 MS.gene31685:CDS
TACCAGCTATCCATCCTAGT+TGG 0.452399 1.1:-12250888 None:intergenic
GTTGTTTGCATCCATAGAAA+AGG 0.452898 1.1:+12251866 MS.gene31685:CDS
GGTTATGTATTCATTGCAGT+TGG 0.455037 1.1:+12252022 MS.gene31685:CDS
GCAATATTGCAGGGAATGTA+TGG 0.460609 1.1:+12250797 MS.gene31685:intron
TGTATAGTAATCCACATGAT+TGG 0.460899 1.1:+12252710 MS.gene31685:CDS
GCATAACCGGAACACAAATA+GGG 0.463229 1.1:+12252299 MS.gene31685:CDS
CTAGCTCTGTTGGGAGCGAT+TGG 0.463495 1.1:+12253348 MS.gene31685:CDS
TACAAAGACAATTCAAAAGT+TGG 0.463664 1.1:-12253458 None:intergenic
CTAGGATGGATAGCTGGTAT+AGG 0.464604 1.1:+12250892 MS.gene31685:CDS
GTGGCGTGTTTGCACTTCAA+TGG 0.465802 1.1:+12252348 MS.gene31685:CDS
TTCCTGCTATGTAGTTGCCT+TGG 0.466308 1.1:+12252602 MS.gene31685:CDS
GATGGTAAAGCCAAAAGAAC+TGG 0.469877 1.1:+12249842 MS.gene31685:CDS
ATAGGGAAGAAGACAACTAA+TGG 0.480258 1.1:-12253378 None:intergenic
GTTGGCTCTAGCATGGGCCA+TGG 0.482757 1.1:+12250864 MS.gene31685:CDS
AGAAAATAAACAAATGAAAA+GGG 0.483828 1.1:+12252544 MS.gene31685:CDS
TATTTGTGTTCCGGTTATGC+TGG 0.485037 1.1:-12252296 None:intergenic
ACCAGCTATCCATCCTAGTT+GGG 0.489518 1.1:-12250887 None:intergenic
GGAACGATGCAAGTAATTTG+TGG 0.491416 1.1:+12251530 MS.gene31685:CDS
TTTGGCTAAGAGCAGGAAAA+GGG 0.492627 1.1:+12252266 MS.gene31685:intron
ATAACAGTTGTAGTAGGGGC+AGG 0.494302 1.1:+12250838 MS.gene31685:CDS
CCAAGGGCTACTATCCAATA+GGG 0.504386 1.1:-12252680 None:intergenic
TGGCGTGTTTGCACTTCAAT+GGG 0.506484 1.1:+12252349 MS.gene31685:CDS
TGGCATTGCCATGGCAAGAA+TGG 0.508311 1.1:-12253310 None:intergenic
CCCTATTGGATAGTAGCCCT+TGG 0.514375 1.1:+12252680 MS.gene31685:CDS
TCTTATAATCCCTACATGAT+CGG 0.515618 1.1:+12251911 MS.gene31685:CDS
ATATCATAACAGTTGTAGTA+GGG 0.519670 1.1:+12250833 MS.gene31685:CDS
ATCCCAAAACCGATCATGTA+GGG 0.529885 1.1:-12251920 None:intergenic
AGCCAAGGCAACTACATAGC+AGG 0.535863 1.1:-12252604 None:intergenic
GCATGGGCCATGGCCCAACT+AGG 0.536744 1.1:+12250874 MS.gene31685:CDS
GGGCCATGGCCCAACTAGGA+TGG 0.542624 1.1:+12250878 MS.gene31685:CDS
CCAACTTTCACAAACTGACA+TGG 0.543853 1.1:+12251969 MS.gene31685:CDS
AACAGTTGTAGTAGGGGCAG+GGG 0.543889 1.1:+12250840 MS.gene31685:CDS
TATCCATCCTAGTTGGGCCA+TGG 0.551644 1.1:-12250881 None:intergenic
CATTGATACCCCTGTCACAT+TGG 0.552253 1.1:-12252567 None:intergenic
AAACGAGGTGATAGCGGCAA+TGG 0.553749 1.1:-12251999 None:intergenic
AGATAAGTACACTAAGACAA+AGG 0.554929 1.1:-12252045 None:intergenic
GCCCAACTAGGATGGATAGC+TGG 0.559262 1.1:+12250886 MS.gene31685:CDS
AGGTTTCCAGACCCAATCAC+TGG 0.561683 1.1:+12250976 MS.gene31685:CDS
ACTTGTTTAGGTTAATTTGG+AGG 0.564036 1.1:+12253265 MS.gene31685:CDS
TTACTATACATACTTCTCCA+AGG 0.567292 1.1:-12252697 None:intergenic
TAACAGTTGTAGTAGGGGCA+GGG 0.570383 1.1:+12250839 MS.gene31685:CDS
ACTGTAAGTGAAAATAGAGA+TGG 0.570667 1.1:-12250935 None:intergenic
CACCAAAAGCAGCATAGCCA+AGG 0.570972 1.1:-12252619 None:intergenic
TATCCCAAAACCGATCATGT+AGG 0.575682 1.1:-12251921 None:intergenic
GACTATTTACTTAACGTGCG+TGG 0.588383 1.1:+12253225 MS.gene31685:CDS
AAGCTTGCTGGGATAACAGT+GGG 0.590727 1.1:+12251569 MS.gene31685:CDS
TGAAAAGGGCCAATGTGACA+GGG 0.592390 1.1:+12252558 MS.gene31685:CDS
CCTGATATGCTCCAATCATG+TGG 0.605077 1.1:-12252721 None:intergenic
TACTATACATACTTCTCCAA+GGG 0.606919 1.1:-12252696 None:intergenic
ACTGGCAACCATTCTTGCCA+TGG 0.608685 1.1:+12253302 MS.gene31685:CDS
TACCCGTGTTATCATTGAGG+TGG 0.616935 1.1:+12253427 MS.gene31685:CDS
ACACCACCTCAATGATAACA+CGG 0.622743 1.1:-12253430 None:intergenic
TAACTGCTGCAGAGAAAGTG+TGG 0.629057 1.1:+12252329 MS.gene31685:CDS
GCATACCCGTGTTATCATTG+AGG 0.631382 1.1:+12253424 MS.gene31685:CDS
ATCATGGAACAAGATGATGA+TGG 0.632907 1.1:+12249824 None:intergenic
TATCATAACAGTTGTAGTAG+GGG 0.641841 1.1:+12250834 MS.gene31685:CDS
TTGGCTAAGAGCAGGAAAAG+GGG 0.645369 1.1:+12252267 MS.gene31685:intron
ATAACCAAACGAGGTGATAG+CGG 0.652735 1.1:-12252005 None:intergenic
CACCACCTCAATGATAACAC+GGG 0.666427 1.1:-12253429 None:intergenic
GAAAAGGGCCAATGTGACAG+GGG 0.672165 1.1:+12252559 MS.gene31685:CDS
AAAGCTTGCTGGGATAACAG+TGG 0.698440 1.1:+12251568 MS.gene31685:CDS
AAATGGGTGCTAATATCATG+TGG 0.726418 1.1:+12253178 MS.gene31685:CDS
AATGAATACATAACCAAACG+AGG 0.738565 1.1:-12252014 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATATTTCTATTTGATAAT+AGG + chr1.1:12251506-12251525 MS.gene31685:intron 10.0%
!! AAAATATGATATATGACAAA+AGG - chr1.1:12253014-12253033 None:intergenic 15.0%
!! AAATTATATATAACCATGAT+AGG + chr1.1:12252857-12252876 MS.gene31685:intron 15.0%
!! ACATAATACAAAAAAAATCA+TGG + chr1.1:12251701-12251720 MS.gene31685:intron 15.0%
!! AGAAAATAAACAAATGAAAA+GGG + chr1.1:12252544-12252563 MS.gene31685:CDS 15.0%
!! ATAAAACTCAATAATTAAAC+TGG - chr1.1:12252764-12252783 None:intergenic 15.0%
!! ATGTTATGATCATTAATATT+TGG + chr1.1:12250771-12250790 MS.gene31685:intron 15.0%
!! TATCATGGTTATATATAATT+TGG - chr1.1:12252858-12252877 None:intergenic 15.0%
!! TATGCTATTAGTATTTATTT+AGG + chr1.1:12252939-12252958 MS.gene31685:intron 15.0%
!! TTAAAAAACAAAGAATTAGA+TGG - chr1.1:12250511-12250530 None:intergenic 15.0%
!! TTTCATTTATACTTATTTAG+AGG - chr1.1:12250747-12250766 None:intergenic 15.0%
!!! ATCTAATTCTTTGTTTTTTA+AGG + chr1.1:12250510-12250529 MS.gene31685:intron 15.0%
!!! ATTTTTCCATTATTTTGTTT+AGG + chr1.1:12252499-12252518 MS.gene31685:intron 15.0%
!!! TTGATTTATGAATTTTGAAT+CGG - chr1.1:12253205-12253224 None:intergenic 15.0%
!! AAATCATGGTTAGATTAATT+TGG + chr1.1:12251715-12251734 MS.gene31685:intron 20.0%
!! AAGATTGATACCATATAATT+AGG - chr1.1:12249957-12249976 None:intergenic 20.0%
!! AATGGAAAAATCAAATACAA+GGG - chr1.1:12252490-12252509 None:intergenic 20.0%
!! AATTAAAATAGAAAGGAAGA+AGG - chr1.1:12249874-12249893 None:intergenic 20.0%
!! ATGTATCCTAAACAAAATAA+TGG - chr1.1:12252508-12252527 None:intergenic 20.0%
!! CAGAAAATAAACAAATGAAA+AGG + chr1.1:12252543-12252562 MS.gene31685:CDS 20.0%
!! TAATGGAAAAATCAAATACA+AGG - chr1.1:12252491-12252510 None:intergenic 20.0%
!! TGTAGTATTTCCTAATTATA+TGG + chr1.1:12249944-12249963 MS.gene31685:intron 20.0%
!! TTATATATGTCTACTTACAA+AGG + chr1.1:12252240-12252259 MS.gene31685:intron 20.0%
!! TTCAGAGAATTAAAATAGAA+AGG - chr1.1:12249881-12249900 None:intergenic 20.0%
!!! ATAGTTGCTTTTAAAACTTT+CGG - chr1.1:12250468-12250487 None:intergenic 20.0%
!!! ATTCCTTGAAGTTTAAAATA+TGG + chr1.1:12251447-12251466 MS.gene31685:intron 20.0%
!!! CTTTTCATTTGTTTATTTTC+TGG - chr1.1:12252545-12252564 None:intergenic 20.0%
!!! TAATATTTTATTACAGGTCA+TGG + chr1.1:12253131-12253150 MS.gene31685:intron 20.0%
!!! TATTTCTATTTGATAATAGG+TGG + chr1.1:12251509-12251528 MS.gene31685:intron 20.0%
!!! TGATTTATGAATTTTGAATC+GGG - chr1.1:12253204-12253223 None:intergenic 20.0%
!!! TTCCTTGAAGTTTAAAATAT+GGG + chr1.1:12251448-12251467 MS.gene31685:intron 20.0%
! AACTACTCAACACTATTTAA+TGG + chr1.1:12250250-12250269 MS.gene31685:intron 25.0%
! AAGGAATATTCTGTTATAAG+AGG - chr1.1:12251434-12251453 None:intergenic 25.0%
! AATATTCTGTTATAAGAGGA+GGG - chr1.1:12251430-12251449 None:intergenic 25.0%
! AATCCAAAAAAAATGTTTCC+TGG - chr1.1:12252653-12252672 None:intergenic 25.0%
! ATATCATAACAGTTGTAGTA+GGG + chr1.1:12250833-12250852 MS.gene31685:CDS 25.0%
! ATCAAACATGTTATTGATGT+TGG - chr1.1:12250085-12250104 None:intergenic 25.0%
! ATCAATTCTTGAAGAGTAAA+GGG - chr1.1:12251199-12251218 None:intergenic 25.0%
! ATGTAAAGTAATTTATGCTC+CGG - chr1.1:12250228-12250247 None:intergenic 25.0%
! ATGTTAAGGTTTCTACAAAT+AGG + chr1.1:12250601-12250620 MS.gene31685:intron 25.0%
! ATGTTCATTGAATAATGTTC+CGG + chr1.1:12250206-12250225 MS.gene31685:intron 25.0%
! ATTTAGGTATTAAAGTTAGC+TGG + chr1.1:12252955-12252974 MS.gene31685:intron 25.0%
! CAAAGATGAAAATTATGCAT+TGG - chr1.1:12250685-12250704 None:intergenic 25.0%
! GCTAGAAATTGATTGAAAAA+TGG - chr1.1:12253333-12253352 None:intergenic 25.0%
! GTGACAAAAATTGATTGATT+TGG + chr1.1:12250111-12250130 MS.gene31685:intron 25.0%
! TACAAAGACAATTCAAAAGT+TGG - chr1.1:12253461-12253480 None:intergenic 25.0%
! TCAAGATAGGGAAATTAATT+CGG - chr1.1:12252829-12252848 None:intergenic 25.0%
! TCATTAATGTAGTAACAAGT+TGG + chr1.1:12252449-12252468 MS.gene31685:intron 25.0%
! TTTCTGTGAGTTTACAATAA+TGG + chr1.1:12250012-12250031 MS.gene31685:intron 25.0%
!! ACTTTTGAATTGTCTTTGTA+TGG + chr1.1:12253461-12253480 MS.gene31685:CDS 25.0%
!! AGTTGAGAATAAAAAGCATA+AGG - chr1.1:12249922-12249941 None:intergenic 25.0%
!! CAATCAATTTGAACTTGTTT+AGG + chr1.1:12253253-12253272 MS.gene31685:CDS 25.0%
!! GTTAGATTAATTTGGTAAGT+AGG + chr1.1:12251723-12251742 MS.gene31685:intron 25.0%
!! TACTGTTATTTACGACATAA+TGG + chr1.1:12252399-12252418 MS.gene31685:CDS 25.0%
!! TGAACTTGTTTAGGTTAATT+TGG + chr1.1:12253262-12253281 MS.gene31685:CDS 25.0%
!!! AACCCATATTTTAAACTTCA+AGG - chr1.1:12251453-12251472 None:intergenic 25.0%
!!! ATTTGTGGATTGATTTTGTA+TGG + chr1.1:12251545-12251564 MS.gene31685:CDS 25.0%
!!! TAGTTGCTTTTAAAACTTTC+GGG - chr1.1:12250467-12250486 None:intergenic 25.0%
!!! TGGAATTTTGGTTTCAATTT+TGG - chr1.1:12250436-12250455 None:intergenic 25.0%
!!! TGTTATAACCAAGTTTTAAC+CGG + chr1.1:12251344-12251363 MS.gene31685:intron 25.0%
!!! TGTTCTAAGAACACATATTA+AGG - chr1.1:12250711-12250730 None:intergenic 25.0%
!!! TTCATTTGTTTATTTTCTGG+TGG - chr1.1:12252542-12252561 None:intergenic 25.0%
AAACATGTTATTGATGTTGG+CGG - chr1.1:12250082-12250101 None:intergenic 30.0%
AATCAACTACACCATAAAGT+TGG - chr1.1:12252140-12252159 None:intergenic 30.0%
AATGAATACATAACCAAACG+AGG - chr1.1:12252017-12252036 None:intergenic 30.0%
AATTTGGCAAGAATCAAGAT+AGG - chr1.1:12252842-12252861 None:intergenic 30.0%
ACTGTAAGTGAAAATAGAGA+TGG - chr1.1:12250938-12250957 None:intergenic 30.0%
ACTTGTAGAAATACCTATCA+TGG - chr1.1:12252873-12252892 None:intergenic 30.0%
AGATAAGTACACTAAGACAA+AGG - chr1.1:12252048-12252067 None:intergenic 30.0%
ATATTCTGTTATAAGAGGAG+GGG - chr1.1:12251429-12251448 None:intergenic 30.0%
ATTTCTGTTGGGAAATTTGT+TGG - chr1.1:12250350-12250369 None:intergenic 30.0%
ATTTGGCAAGAATCAAGATA+GGG - chr1.1:12252841-12252860 None:intergenic 30.0%
CAATAACATGTTTGATTCTG+CGG + chr1.1:12250089-12250108 MS.gene31685:intron 30.0%
CACGTTAACTAATTTCTGTT+GGG - chr1.1:12250361-12250380 None:intergenic 30.0%
CATATCATAACAGTTGTAGT+AGG + chr1.1:12250832-12250851 MS.gene31685:CDS 30.0%
CATCAATTCTTGAAGAGTAA+AGG - chr1.1:12251200-12251219 None:intergenic 30.0%
CTATTTAATGGTTAGAGACT+TGG + chr1.1:12250262-12250281 MS.gene31685:intron 30.0%
CTTTACTCTTCAAGAATTGA+TGG + chr1.1:12251198-12251217 MS.gene31685:intron 30.0%
GAATATTCTGTTATAAGAGG+AGG - chr1.1:12251431-12251450 None:intergenic 30.0%
GAGCAATATGCATTTGTATA+GGG - chr1.1:12253398-12253417 None:intergenic 30.0%
TACTATACATACTTCTCCAA+GGG - chr1.1:12252699-12252718 None:intergenic 30.0%
TATCATAACAGTTGTAGTAG+GGG + chr1.1:12250834-12250853 MS.gene31685:CDS 30.0%
TCAATTCTTGAAGAGTAAAG+GGG - chr1.1:12251198-12251217 None:intergenic 30.0%
TCACGTTAACTAATTTCTGT+TGG - chr1.1:12250362-12250381 None:intergenic 30.0%
TCTTATAATCCCTACATGAT+CGG + chr1.1:12251911-12251930 MS.gene31685:CDS 30.0%
TGAGCAATATGCATTTGTAT+AGG - chr1.1:12253399-12253418 None:intergenic 30.0%
TGTATAGTAATCCACATGAT+TGG + chr1.1:12252710-12252729 MS.gene31685:CDS 30.0%
TTACTATACATACTTCTCCA+AGG - chr1.1:12252700-12252719 None:intergenic 30.0%
! AAAACTTTCGGGTATTTGTA+TGG - chr1.1:12250456-12250475 None:intergenic 30.0%
! AATTTCTTTTGCCAGTGATT+GGG - chr1.1:12250990-12251009 None:intergenic 30.0%
! ACTTGTTTAGGTTAATTTGG+AGG + chr1.1:12253265-12253284 MS.gene31685:CDS 30.0%
! TAATTTCTTTTGCCAGTGAT+TGG - chr1.1:12250991-12251010 None:intergenic 30.0%
! TAGTAACAAGTTGGATTTCT+CGG + chr1.1:12252458-12252477 MS.gene31685:intron 30.0%
! TGTTACTGTGTAGATTTTCA+TGG + chr1.1:12250551-12250570 MS.gene31685:intron 30.0%
!! AATCAATTTCTAGCTCTGTT+GGG + chr1.1:12253339-12253358 MS.gene31685:CDS 30.0%
!! ATAGTTGAGCTTCTTTTTCA+TGG + chr1.1:12250403-12250422 MS.gene31685:intron 30.0%
!!! ACACCAGGAAACATTTTTTT+TGG + chr1.1:12252647-12252666 MS.gene31685:CDS 30.0%
AAAAAATGTTTCCTGGTGTG+TGG - chr1.1:12252646-12252665 None:intergenic 35.0%
AAACCTTAACATGTTCCGTA+AGG - chr1.1:12250593-12250612 None:intergenic 35.0%
AAATGGGTGCTAATATCATG+TGG + chr1.1:12253178-12253197 MS.gene31685:CDS 35.0%
AACATGTTATTGATGTTGGC+GGG - chr1.1:12250081-12250100 None:intergenic 35.0%
ACAGTAACACATCATTAGAC+GGG - chr1.1:12250540-12250559 None:intergenic 35.0%
ATAGGGAAGAAGACAACTAA+TGG - chr1.1:12253381-12253400 None:intergenic 35.0%
ATCCTCTACAACCAACTTTA+TGG + chr1.1:12252126-12252145 MS.gene31685:intron 35.0%
ATTGAAAAATGGCATTGCCA+TGG - chr1.1:12253322-12253341 None:intergenic 35.0%
ATTTCAACGACGCGAAAAAA+TGG - chr1.1:12253162-12253181 None:intergenic 35.0%
CACAGTAACACATCATTAGA+CGG - chr1.1:12250541-12250560 None:intergenic 35.0%
CAGAAAAGTCTACGATAAGA+TGG + chr1.1:12252179-12252198 MS.gene31685:intron 35.0%
CATGCTAACTTATGTCCTTA+CGG + chr1.1:12250575-12250594 MS.gene31685:intron 35.0%
CATGTCAGTTTGTGAAAGTT+GGG - chr1.1:12251971-12251990 None:intergenic 35.0%
GGTTATGTATTCATTGCAGT+TGG + chr1.1:12252022-12252041 MS.gene31685:CDS 35.0%
GTTGTTTGCATCCATAGAAA+AGG + chr1.1:12251866-12251885 MS.gene31685:CDS 35.0%
TCTTTGTATGGTTGTCTCAT+TGG + chr1.1:12253473-12253492 MS.gene31685:CDS 35.0%
TGTCTTAGTGTACTTATCTC+AGG + chr1.1:12252049-12252068 MS.gene31685:CDS 35.0%
! AAGGTACATACCAGTTCTTT+TGG - chr1.1:12249855-12249874 None:intergenic 35.0%
! ATTTTGTATGGAAAGCTTGC+TGG + chr1.1:12251557-12251576 MS.gene31685:CDS 35.0%
! CACTAAATTTTTGCCCTGTT+CGG + chr1.1:12251082-12251101 MS.gene31685:intron 35.0%
! CGGGTATTTGTATGGAATTT+TGG - chr1.1:12250448-12250467 None:intergenic 35.0%
! TTGGATTTTATGAGCCCTAT+TGG + chr1.1:12252666-12252685 MS.gene31685:CDS 35.0%
! TTTTCTTCATACGCAAGAGT+CGG - chr1.1:12250316-12250335 None:intergenic 35.0%
!! ATTTGGTGTGCAATATTGCA+GGG + chr1.1:12250788-12250807 MS.gene31685:intron 35.0%
!! CAATCAATTTCTAGCTCTGT+TGG + chr1.1:12253338-12253357 MS.gene31685:CDS 35.0%
!! TATTTGGTGTGCAATATTGC+AGG + chr1.1:12250787-12250806 MS.gene31685:intron 35.0%
!! TTTTGTATGGAAAGCTTGCT+GGG + chr1.1:12251558-12251577 MS.gene31685:CDS 35.0%
!!! ATTTTTTCGCGTCGTTGAAA+TGG + chr1.1:12253161-12253180 MS.gene31685:CDS 35.0%
!!! GAGACATATTTTAGCAACGA+GGG + chr1.1:12251161-12251180 MS.gene31685:intron 35.0%
!!! GTCTACTTACAAAGGCATTT+TGG + chr1.1:12252248-12252267 MS.gene31685:intron 35.0%
!!! TGAGACATATTTTAGCAACG+AGG + chr1.1:12251160-12251179 MS.gene31685:intron 35.0%
!!! TTTTTTCGCGTCGTTGAAAT+GGG + chr1.1:12253162-12253181 MS.gene31685:CDS 35.0%
AAAATCGACCGTAGAGGATA+CGG + chr1.1:12252207-12252226 MS.gene31685:intron 40.0%
ACACCACCTCAATGATAACA+CGG - chr1.1:12253433-12253452 None:intergenic 40.0%
AGCATAACCGGAACACAAAT+AGG + chr1.1:12252298-12252317 MS.gene31685:CDS 40.0%
ATAACCAAACGAGGTGATAG+CGG - chr1.1:12252008-12252027 None:intergenic 40.0%
ATCCCAAAACCGATCATGTA+GGG - chr1.1:12251923-12251942 None:intergenic 40.0%
ATGATTGGAGCATATCAGGT+TGG + chr1.1:12252725-12252744 MS.gene31685:intron 40.0%
CCAACTTTCACAAACTGACA+TGG + chr1.1:12251969-12251988 MS.gene31685:CDS 40.0%
CCATGTCAGTTTGTGAAAGT+TGG - chr1.1:12251972-12251991 None:intergenic 40.0%
CGAACAGGGCAAAAATTTAG+TGG - chr1.1:12251084-12251103 None:intergenic 40.0%
CTATGAATCCGTATCCTCTA+CGG - chr1.1:12252218-12252237 None:intergenic 40.0%
GAAGTGTGCATGTGTCAAAA+CGG - chr1.1:12251132-12251151 None:intergenic 40.0%
GACTATTTACTTAACGTGCG+TGG + chr1.1:12253225-12253244 MS.gene31685:CDS 40.0%
GAGGACGATATTTGTGATAC+TGG + chr1.1:12253284-12253303 MS.gene31685:CDS 40.0%
GATCATAAAATCGACCGTAG+AGG + chr1.1:12252201-12252220 MS.gene31685:intron 40.0%
GATGGTAAAGCCAAAAGAAC+TGG + chr1.1:12249842-12249861 MS.gene31685:CDS 40.0%
GCAATATTGCAGGGAATGTA+TGG + chr1.1:12250797-12250816 MS.gene31685:intron 40.0%
GCATAACCGGAACACAAATA+GGG + chr1.1:12252299-12252318 MS.gene31685:CDS 40.0%
GGAACGATGCAAGTAATTTG+TGG + chr1.1:12251530-12251549 MS.gene31685:CDS 40.0%
GTCTTGTAGCTGATTGCTAT+AGG + chr1.1:12250956-12250975 MS.gene31685:CDS 40.0%
GTTTCTCTCCGGTTAAAACT+TGG - chr1.1:12251355-12251374 None:intergenic 40.0%
TAAGCTCAAGAGCTCTACAA+CGG + chr1.1:12251295-12251314 MS.gene31685:intron 40.0%
TATCCCAAAACCGATCATGT+AGG - chr1.1:12251924-12251943 None:intergenic 40.0%
TATTTGTGTTCCGGTTATGC+TGG - chr1.1:12252299-12252318 None:intergenic 40.0%
TCGTTATGACAGTTTCTCTC+CGG - chr1.1:12251366-12251385 None:intergenic 40.0%
TGGACACTTAAGCAATTCGT+AGG + chr1.1:12250282-12250301 MS.gene31685:intron 40.0%
TGTCCTTACGGAACATGTTA+AGG + chr1.1:12250587-12250606 MS.gene31685:intron 40.0%
TTATAAGAGGAGGGGAAAAC+TGG - chr1.1:12251421-12251440 None:intergenic 40.0%
TTTGGCTAAGAGCAGGAAAA+GGG + chr1.1:12252266-12252285 MS.gene31685:intron 40.0%
! CACCATAAAGTTGGTTGTAG+AGG - chr1.1:12252131-12252150 None:intergenic 40.0%
! CAGCTTCAAGTCCTTTTCTA+TGG - chr1.1:12251880-12251899 None:intergenic 40.0%
!! AATCCCTACATGATCGGTTT+TGG + chr1.1:12251917-12251936 MS.gene31685:CDS 40.0%
!! ATCCCTACATGATCGGTTTT+GGG + chr1.1:12251918-12251937 MS.gene31685:CDS 40.0%
!! TTTTGGCTAAGAGCAGGAAA+AGG + chr1.1:12252265-12252284 MS.gene31685:intron 40.0%
ACCAGCTATCCATCCTAGTT+GGG - chr1.1:12250890-12250909 None:intergenic 45.0%
ATAACAGTTGTAGTAGGGGC+AGG + chr1.1:12250838-12250857 MS.gene31685:CDS 45.0%
ATGAAAAGGGCCAATGTGAC+AGG + chr1.1:12252557-12252576 MS.gene31685:CDS 45.0%
CAAGCTGTCAAGAGCTACTT+AGG + chr1.1:12251021-12251040 MS.gene31685:CDS 45.0%
CACCACCTCAATGATAACAC+GGG - chr1.1:12253432-12253451 None:intergenic 45.0%
CATTGATACCCCTGTCACAT+TGG - chr1.1:12252570-12252589 None:intergenic 45.0%
CCAAGGGCTACTATCCAATA+GGG - chr1.1:12252683-12252702 None:intergenic 45.0%
CCACATGATTGGAGCATATC+AGG + chr1.1:12252721-12252740 MS.gene31685:CDS 45.0%
CCTGATATGCTCCAATCATG+TGG - chr1.1:12252724-12252743 None:intergenic 45.0%
CTAGGATGGATAGCTGGTAT+AGG + chr1.1:12250892-12250911 MS.gene31685:CDS 45.0%
GCATACCCGTGTTATCATTG+AGG + chr1.1:12253424-12253443 MS.gene31685:CDS 45.0%
TAACAGCAGACATCCGAACA+GGG - chr1.1:12251098-12251117 None:intergenic 45.0%
TAACAGTTGTAGTAGGGGCA+GGG + chr1.1:12250839-12250858 MS.gene31685:CDS 45.0%
TAACTGCTGCAGAGAAAGTG+TGG + chr1.1:12252329-12252348 MS.gene31685:CDS 45.0%
TACCAGCTATCCATCCTAGT+TGG - chr1.1:12250891-12250910 None:intergenic 45.0%
TACCCGTGTTATCATTGAGG+TGG + chr1.1:12253427-12253446 MS.gene31685:CDS 45.0%
TCCAAGGGCTACTATCCAAT+AGG - chr1.1:12252684-12252703 None:intergenic 45.0%
TGAAAAGGGCCAATGTGACA+GGG + chr1.1:12252558-12252577 MS.gene31685:CDS 45.0%
TGGCGTGTTTGCACTTCAAT+GGG + chr1.1:12252349-12252368 MS.gene31685:CDS 45.0%
TTCCTGCTATGTAGTTGCCT+TGG + chr1.1:12252602-12252621 MS.gene31685:CDS 45.0%
TTCTCTGCAGCAGTTAGTTC+TGG - chr1.1:12252325-12252344 None:intergenic 45.0%
TTCTGGCCCTATTTGTGTTC+CGG - chr1.1:12252308-12252327 None:intergenic 45.0%
TTGGCTAAGAGCAGGAAAAG+GGG + chr1.1:12252267-12252286 MS.gene31685:intron 45.0%
!! AAAGCTTGCTGGGATAACAG+TGG + chr1.1:12251568-12251587 MS.gene31685:CDS 45.0%
!! AAGCTTGCTGGGATAACAGT+GGG + chr1.1:12251569-12251588 MS.gene31685:CDS 45.0%
!! ATTTTAGCAACGAGGGTGAG+TGG + chr1.1:12251168-12251187 MS.gene31685:intron 45.0%
!!! AAGGCATTTTGGCTAAGAGC+AGG + chr1.1:12252259-12252278 MS.gene31685:intron 45.0%
!! TAAAATATTATTTGATATAT+TGG + chr1.1:12252905-12252924 MS.gene31685:intron 5.0%
!!! ATAATTTAATATTTTATTAC+AGG + chr1.1:12253125-12253144 MS.gene31685:intron 5.0%
AACAGTTGTAGTAGGGGCAG+GGG + chr1.1:12250840-12250859 MS.gene31685:CDS 50.0%
ACTGGCAACCATTCTTGCCA+TGG + chr1.1:12253302-12253321 MS.gene31685:CDS 50.0%
AGCCAAGGCAACTACATAGC+AGG - chr1.1:12252607-12252626 None:intergenic 50.0%
AGGTTTCCAGACCCAATCAC+TGG + chr1.1:12250976-12250995 MS.gene31685:CDS 50.0%
ATTGCCGCTATCACCTCGTT+TGG + chr1.1:12252001-12252020 MS.gene31685:CDS 50.0%
CACCAAAAGCAGCATAGCCA+AGG - chr1.1:12252622-12252641 None:intergenic 50.0%
CCCTATTGGATAGTAGCCCT+TGG + chr1.1:12252680-12252699 MS.gene31685:CDS 50.0%
CTAACAGCAGACATCCGAAC+AGG - chr1.1:12251099-12251118 None:intergenic 50.0%
CTGTTGGGAGCGATTGGATT+TGG + chr1.1:12253354-12253373 MS.gene31685:CDS 50.0%
GAAAAGGGCCAATGTGACAG+GGG + chr1.1:12252559-12252578 MS.gene31685:CDS 50.0%
GTGGCGTGTTTGCACTTCAA+TGG + chr1.1:12252348-12252367 MS.gene31685:CDS 50.0%
TATCCATCCTAGTTGGGCCA+TGG - chr1.1:12250884-12250903 None:intergenic 50.0%
TGGCATTGCCATGGCAAGAA+TGG - chr1.1:12253313-12253332 None:intergenic 50.0%
! CTTTTGCCAGTGATTGGGTC+TGG - chr1.1:12250985-12251004 None:intergenic 50.0%
!! AAACGAGGTGATAGCGGCAA+TGG - chr1.1:12252002-12252021 None:intergenic 50.0%
!!! TGCCTTGGCTATGCTGCTTT+TGG + chr1.1:12252617-12252636 MS.gene31685:CDS 50.0%
GCCCAACTAGGATGGATAGC+TGG + chr1.1:12250886-12250905 MS.gene31685:CDS 55.0%
! GGGGCATCTACCAGCATAAC+CGG + chr1.1:12252286-12252305 MS.gene31685:CDS 55.0%
! TTGGCGGGCAGAACTGATGA+AGG - chr1.1:12250066-12250085 None:intergenic 55.0%
!! AGGGGTGTTGGCTCTAGCAT+GGG + chr1.1:12250858-12250877 MS.gene31685:CDS 55.0%
!! CTAGCTCTGTTGGGAGCGAT+TGG + chr1.1:12253348-12253367 MS.gene31685:CDS 55.0%
!! GCTTTTGGTGACCACACACC+AGG + chr1.1:12252632-12252651 MS.gene31685:CDS 55.0%
! TGTAGTAGGGGCAGGGGTGT+TGG + chr1.1:12250846-12250865 MS.gene31685:CDS 60.0%
!! CAGGGGTGTTGGCTCTAGCA+TGG + chr1.1:12250857-12250876 MS.gene31685:CDS 60.0%
!! GTTGGCTCTAGCATGGGCCA+TGG + chr1.1:12250864-12250883 MS.gene31685:CDS 60.0%
GCATGGGCCATGGCCCAACT+AGG + chr1.1:12250874-12250893 MS.gene31685:CDS 65.0%
GGGCCATGGCCCAACTAGGA+TGG + chr1.1:12250878-12250897 MS.gene31685:CDS 65.0%


Chromosome Type Strat End Strand Name
chr1.1 gene 12249827 12253569 12249827 ID=MS.gene31685
chr1.1 mRNA 12249827 12253569 12249827 ID=MS.gene31685.t1;Parent=MS.gene31685
chr1.1 exon 12249827 12249863 12249827 ID=MS.gene31685.t1.exon1;Parent=MS.gene31685.t1
chr1.1 CDS 12249827 12249863 12249827 ID=cds.MS.gene31685.t1;Parent=MS.gene31685.t1
chr1.1 exon 12250809 12251042 12250809 ID=MS.gene31685.t1.exon2;Parent=MS.gene31685.t1
chr1.1 CDS 12250809 12251042 12250809 ID=cds.MS.gene31685.t1;Parent=MS.gene31685.t1
chr1.1 exon 12251528 12251621 12251528 ID=MS.gene31685.t1.exon3;Parent=MS.gene31685.t1
chr1.1 CDS 12251528 12251621 12251528 ID=cds.MS.gene31685.t1;Parent=MS.gene31685.t1
chr1.1 exon 12251853 12252070 12251853 ID=MS.gene31685.t1.exon4;Parent=MS.gene31685.t1
chr1.1 CDS 12251853 12252070 12251853 ID=cds.MS.gene31685.t1;Parent=MS.gene31685.t1
chr1.1 exon 12252281 12252420 12252281 ID=MS.gene31685.t1.exon5;Parent=MS.gene31685.t1
chr1.1 CDS 12252281 12252420 12252281 ID=cds.MS.gene31685.t1;Parent=MS.gene31685.t1
chr1.1 exon 12252521 12252742 12252521 ID=MS.gene31685.t1.exon6;Parent=MS.gene31685.t1
chr1.1 CDS 12252521 12252742 12252521 ID=cds.MS.gene31685.t1;Parent=MS.gene31685.t1
chr1.1 exon 12253147 12253569 12253147 ID=MS.gene31685.t1.exon7;Parent=MS.gene31685.t1
chr1.1 CDS 12253147 12253569 12253147 ID=cds.MS.gene31685.t1;Parent=MS.gene31685.t1
Gene Sequence

>MS.gene31685

ATGGAACAAGATGATGATGGTAAAGCCAAAAGAACTGGTATGTACCTTCTTCCTTTCTATTTTAATTCTCTGAATCAGAATCTGATTCTTTTCCTTATGCTTTTTATTCTCAACTTTTGTAGTATTTCCTAATTATATGGTATCAATCTTTTATTCAATTAATTAATTAAAACAGCTTTAATATGTTTCTGTGAGTTTACAATAATGGCTTGATTTTATTTTATGATTCATTTTCTCCTTCATCAGTTCTGCCCGCCAACATCAATAACATGTTTGATTCTGCGGTGACAAAAATTGATTGATTTGGTAAAATTATATTTAGTGTTGAGTAGTTTCTTTTTTGACAAATAGTGTTGAGTAGTTGAATGTAAAGTAATTTATGTTCATTGAATAATGTTCCGGAGCATAAATTACTTTACATTCAACTACTCAACACTATTTAATGGTTAGAGACTTGGACACTTAAGCAATTCGTAGGTTTGAATTCCGACTCTTGCGTATGAAGAAAATCTAAATTAGTCCAACAAATTTCCCAACAGAAATTAGTTAACGTGATAAAATAACTACTGTATATGAATAGTTGAGCTTCTTTTTCATGGAAAAAGACCAAAATTGAAACCAAAATTCCATACAAATACCCGAAAGTTTTAAAAGCAACTATGCATCAATTATTTAACACATCCATCTAATTCTTTGTTTTTTAAGGAAGACCCGTCTAATGATGTGTTACTGTGTAGATTTTCATGGTCATGCTAACTTATGTCCTTACGGAACATGTTAAGGTTTCTACAAATAGGAAGTATTTATTGAGAAACGTTAAATTTCAATTCTGTGAGAAATAAATTGACACAATTTCCAATGCATAATTTTCATCTTTGTAACCTTAATATGTGTTCTTAGAACACAAATTAGCATTTCCTCTAAATAAGTATAAATGAAAAATCATGTTATGATCATTAATATTTGGTGTGCAATATTGCAGGGAATGTATGGACTGCAACAACACATATCATAACAGTTGTAGTAGGGGCAGGGGTGTTGGCTCTAGCATGGGCCATGGCCCAACTAGGATGGATAGCTGGTATAGGCAGTATAGTACTCTTTGCATCCATCTCTATTTTCACTTACAGTCTTGTAGCTGATTGCTATAGGTTTCCAGACCCAATCACTGGCAAAAGAAATTATACTTACATGCAAGCTGTCAAGAGCTACTTAGGTATACTCTTCTACTCTTCTTGTATACATATGAAAAAACCACTAAATTTTTGCCCTGTTCGGATGTCTGCTGTTAGACAGTTTGTGCCGTTTTGACACATGCACACTTCTAAAGATATGAGACATATTTTAGCAACGAGGGTGAGTGGATGTCCCCTTTACTCTTCAAGAATTGATGGTTTACACTGATAGTGCATGTGAAAGAACTCGTAAAATCTAGATCACGAAACTATGTATTATTCAAAGATAAAGATAAGCTCAAGAGCTCTACAACGGTGAATACAAAAAATGAAAGAGATAATTGTTATAACCAAGTTTTAACCGGAGAGAAACTGTCATAACGAACATCTAACAATATTTCTTAATGACTTACTCACCAGTTTTCCCCTCCTCTTATAACAGAATATTCCTTGAAGTTTAAAATATGGGTTGCATATTTTTGATTTATTTCAATTTGCTTGATTTTATATTTCTATTTGATAATAGGTGGAACGATGCAAGTAATTTGTGGATTGATTTTGTATGGAAAGCTTGCTGGGATAACAGTGGGCTACACAATAACTTCATCGACAAGCTTAGCGTATGTTATTACATTAAACAATTACTTATAGTTATTATTTGCATGTATATAACAATATTACATTATGAAAATATGTGTTACATAATACAAAAAAAATCATGGTTAGATTAATTTGGTAAGTAGGAGACATTATTTGCAAATATTTTTTTTCTAATGTTTGTATTTGTATTTTGATGTTTATCTAATTTTAAAATTGTCAATATATTCTTACTAACAAGTGTAATATGACAGAGAAATAAACAAAGTTGTTTGCATCCATAGAAAAGGACTTGAAGCTGATTGCAGCACTTCTTATAATCCCTACATGATCGGTTTTGGGATATTGCAGATTTTCTTGTCTCAAATTCCCAACTTTCACAAACTGACATGGATCTCAACCATTGCCGCTATCACCTCGTTTGGTTATGTATTCATTGCAGTTGGCCTTTGTCTTAGTGTACTTATCTCAGGTAGTTTGTTGATCACTTTTATCTCTGTCATATATTACATAGTTTTGCAAATTCGATCCTCTACAACCAACTTTATGGTGTAGTTGATTGTAGATCGTAAGACTAATACAGAAAAGTCTACGATAAGATGGATCATAAAATCGACCGTAGAGGATACGGATTCATAGTTTTATATATGTCTACTTACAAAGGCATTTTGGCTAAGAGCAGGAAAAGGGGCATCTACCAGCATAACCGGAACACAAATAGGGCCAGAACTAACTGCTGCAGAGAAAGTGTGGCGTGTTTGCACTTCAATGGGAAACATAGCTCTTGCTAGCACTTACGCTACTGTTATTTACGACATAATGGTAAACTATCACAATTCACTTATTATAATCATTAATGTAGTAACAAGTTGGATTTCTCGGTTATTACCCTTGTATTTGATTTTTCCATTATTTTGTTTAGGATACATTAAAGTCACATCCACCAGAAAATAAACAAATGAAAAGGGCCAATGTGACAGGGGTATCAATGATGACAATGATATTCCTGCTATGTAGTTGCCTTGGCTATGCTGCTTTTGGTGACCACACACCAGGAAACATTTTTTTTGGATTTTATGAGCCCTATTGGATAGTAGCCCTTGGAGAAGTATGTATAGTAATCCACATGATTGGAGCATATCAGGTTGGAACATTACTAATTCCAGTTTAATTATTGAGTTTTATAATTGAATATTATTTTGTTTAAACATATTTTTACATAGACATCCGAATTAATTTCCCTATCTTGATTCTTGCCAAATTATATATAACCATGATAGGTATTTCTACAAGTAGAACAATATTGTAAAATATTATTTGATATATTGGTAAAATACGTTTATGCTATTAGTATTTATTTAGGTATTAAAGTTAGCTGGTATAGTGAAAGATATTACACAAATATCTAGTATCCTTTTGTCATATATCATATTTTTCTAAAAATCTGATTATCAAAACAAAATAATAAAATATGAACAAAATGTTATGTATATTGTAATTGTATAATATTTTGTTAAGAATGCATGATAATTTAATATTTTATTACAGGTCATGGCACAACCATTTTTTCGCGTCGTTGAAATGGGTGCTAATATCATGTGGCCCGATTCAAAATTCATAAATCAAGACTATTTACTTAACGTGCGTGGTGCAACAATCAATTTGAACTTGTTTAGGTTAATTTGGAGGACGATATTTGTGATACTGGCAACCATTCTTGCCATGGCAATGCCATTTTTCAATCAATTTCTAGCTCTGTTGGGAGCGATTGGATTTGGTCCATTAGTTGTCTTCTTCCCTATACAAATGCATATTGCTCAGAAGCGCATACCCGTGTTATCATTGAGGTGGTGTGCGCTCCAACTTTTGAATTGTCTTTGTATGGTTGTCTCATTGGCTGCTGTAGTTGCTTCAGTTCATGAAATTAGCGAAAATATTCACAAATACAAGATTTTTGCTTATAAACAATAG
Protein sequence

>MS.gene31685.t1

MEQDDDGKAKRTGNVWTATTHIITVVVGAGVLALAWAMAQLGWIAGIGSIVLFASISIFTYSLVADCYRFPDPITGKRNYTYMQAVKSYLGGTMQVICGLILYGKLAGITVGYTITSSTSLAEINKVVCIHRKGLEADCSTSYNPYMIGFGILQIFLSQIPNFHKLTWISTIAAITSFGYVFIAVGLCLSVLISGKGASTSITGTQIGPELTAAEKVWRVCTSMGNIALASTYATVIYDIMDTLKSHPPENKQMKRANVTGVSMMTMIFLLCSCLGYAAFGDHTPGNIFFGFYEPYWIVALGEVCIVIHMIGAYQVMAQPFFRVVEMGANIMWPDSKFINQDYLLNVRGATINLNLFRLIWRTIFVILATILAMAMPFFNQFLALLGAIGFGPLVVFFPIQMHIAQKRIPVLSLRWCALQLLNCLCMVVSLAAVVASVHEISENIHKYKIFAYKQ