Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene33084.t1 | XP_003588798.2 | 97.5 | 1011 | 24 | 1 | 1 | 1010 | 1 | 1011 | 0.00E+00 | 1832 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene33084.t1 | Q3S4A7 | 56.2 | 1027 | 327 | 15 | 1 | 1010 | 1 | 921 | 3.7e-289 | 995.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene33084.t1 | G7I7J7 | 97.5 | 1011 | 24 | 1 | 1 | 1010 | 1 | 1011 | 0.0e+00 | 1832.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene33084.t1 | TR | Others |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050444 | MS.gene33084 | -0.810117 | 1.35E-50 | -1.69E-46 |
MS.gene050577 | MS.gene33084 | -0.801652 | 8.14E-49 | -1.69E-46 |
MS.gene050612 | MS.gene33084 | -0.812303 | 4.54E-51 | -1.69E-46 |
MS.gene051138 | MS.gene33084 | 0.824772 | 6.73E-54 | -1.69E-46 |
MS.gene051439 | MS.gene33084 | 0.803587 | 3.25E-49 | -1.69E-46 |
MS.gene051517 | MS.gene33084 | 0.920548 | 1.11E-87 | -1.69E-46 |
MS.gene051651 | MS.gene33084 | 0.835862 | 1.31E-56 | -1.69E-46 |
MS.gene052606 | MS.gene33084 | 0.804147 | 2.48E-49 | -1.69E-46 |
MS.gene05470 | MS.gene33084 | -0.824724 | 6.91E-54 | -1.69E-46 |
MS.gene055502 | MS.gene33084 | -0.805881 | 1.08E-49 | -1.69E-46 |
MS.gene055748 | MS.gene33084 | -0.805249 | 1.46E-49 | -1.69E-46 |
MS.gene055751 | MS.gene33084 | -0.810387 | 1.18E-50 | -1.69E-46 |
MS.gene05589 | MS.gene33084 | -0.800836 | 1.20E-48 | -1.69E-46 |
MS.gene056224 | MS.gene33084 | 0.800963 | 1.13E-48 | -1.69E-46 |
MS.gene056748 | MS.gene33084 | 0.813554 | 2.41E-51 | -1.69E-46 |
MS.gene056856 | MS.gene33084 | 0.834052 | 3.75E-56 | -1.69E-46 |
MS.gene057717 | MS.gene33084 | 0.82694 | 2.06E-54 | -1.69E-46 |
MS.gene057768 | MS.gene33084 | 0.814769 | 1.30E-51 | -1.69E-46 |
MS.gene058334 | MS.gene33084 | 0.805992 | 1.02E-49 | -1.69E-46 |
MS.gene058452 | MS.gene33084 | 0.904193 | 1.58E-79 | -1.69E-46 |
MS.gene058603 | MS.gene33084 | 0.831967 | 1.24E-55 | -1.69E-46 |
MS.gene05914 | MS.gene33084 | -0.802682 | 5.00E-49 | -1.69E-46 |
MS.gene05926 | MS.gene33084 | 0.807809 | 4.22E-50 | -1.69E-46 |
MS.gene059677 | MS.gene33084 | -0.803892 | 2.81E-49 | -1.69E-46 |
MS.gene060405 | MS.gene33084 | 0.827478 | 1.53E-54 | -1.69E-46 |
MS.gene060762 | MS.gene33084 | -0.80317 | 3.96E-49 | -1.69E-46 |
MS.gene06084 | MS.gene33084 | 0.805171 | 1.52E-49 | -1.69E-46 |
MS.gene061044 | MS.gene33084 | 0.825797 | 3.85E-54 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene33084.t1 | MTR_1g013360 | 98.318 | 1011 | 16 | 1 | 1 | 1010 | 1 | 1011 | 0.0 | 2068 |
MS.gene33084.t1 | MTR_3g105590 | 69.087 | 1019 | 233 | 15 | 5 | 1011 | 1 | 949 | 0.0 | 1353 |
MS.gene33084.t1 | MTR_1g014670 | 82.707 | 399 | 58 | 3 | 43 | 441 | 2 | 389 | 0.0 | 655 |
MS.gene33084.t1 | MTR_3g085130 | 35.535 | 318 | 170 | 7 | 379 | 695 | 240 | 523 | 4.08e-42 | 166 |
MS.gene33084.t1 | MTR_3g085130 | 32.639 | 144 | 77 | 3 | 869 | 1011 | 698 | 822 | 2.48e-13 | 74.7 |
MS.gene33084.t1 | MTR_3g085130 | 35.535 | 318 | 170 | 7 | 379 | 695 | 450 | 733 | 1.94e-41 | 165 |
MS.gene33084.t1 | MTR_3g085130 | 32.639 | 144 | 77 | 3 | 869 | 1011 | 908 | 1032 | 7.04e-13 | 73.6 |
MS.gene33084.t1 | MTR_8g106150 | 34.921 | 315 | 178 | 9 | 379 | 686 | 143 | 437 | 2.63e-38 | 154 |
MS.gene33084.t1 | MTR_8g106150 | 32.934 | 167 | 96 | 4 | 846 | 1011 | 601 | 752 | 1.41e-16 | 85.1 |
MS.gene33084.t1 | MTR_8g080770 | 34.323 | 303 | 162 | 6 | 379 | 680 | 395 | 661 | 5.99e-38 | 154 |
MS.gene33084.t1 | MTR_8g080770 | 34.323 | 303 | 162 | 6 | 379 | 680 | 286 | 552 | 6.41e-38 | 154 |
MS.gene33084.t1 | MTR_8g106150 | 34.603 | 315 | 179 | 8 | 379 | 686 | 386 | 680 | 9.38e-38 | 154 |
MS.gene33084.t1 | MTR_8g106150 | 32.934 | 167 | 96 | 4 | 846 | 1011 | 844 | 995 | 1.86e-16 | 85.1 |
MS.gene33084.t1 | MTR_5g097410 | 32.237 | 304 | 173 | 6 | 379 | 680 | 620 | 892 | 7.12e-35 | 145 |
MS.gene33084.t1 | MTR_5g097410 | 31.429 | 140 | 89 | 2 | 858 | 996 | 1065 | 1198 | 2.06e-12 | 72.0 |
MS.gene33084.t1 | MTR_4g031150 | 38.095 | 147 | 88 | 2 | 380 | 524 | 397 | 542 | 5.05e-24 | 109 |
MS.gene33084.t1 | MTR_5g022470 | 29.085 | 306 | 168 | 6 | 379 | 682 | 512 | 770 | 5.98e-24 | 109 |
MS.gene33084.t1 | MTR_8g075340 | 28.000 | 300 | 167 | 6 | 379 | 676 | 474 | 726 | 6.74e-24 | 109 |
MS.gene33084.t1 | MTR_8g075340 | 28.346 | 254 | 124 | 8 | 773 | 1004 | 942 | 1159 | 3.20e-11 | 68.2 |
MS.gene33084.t1 | MTR_5g022470 | 29.085 | 306 | 168 | 6 | 379 | 682 | 512 | 770 | 7.51e-24 | 109 |
MS.gene33084.t1 | MTR_5g022470 | 29.592 | 196 | 82 | 4 | 832 | 999 | 1018 | 1185 | 5.99e-11 | 67.4 |
MS.gene33084.t1 | MTR_7g109150 | 37.226 | 137 | 83 | 2 | 380 | 514 | 348 | 483 | 4.79e-17 | 86.7 |
MS.gene33084.t1 | MTR_7g109150 | 34.559 | 136 | 83 | 3 | 585 | 717 | 484 | 616 | 1.90e-13 | 75.1 |
MS.gene33084.t1 | MTR_1g087140 | 26.970 | 330 | 175 | 12 | 381 | 692 | 394 | 675 | 3.48e-16 | 84.3 |
MS.gene33084.t1 | MTR_1g090850 | 25.956 | 366 | 204 | 12 | 328 | 680 | 337 | 648 | 9.04e-16 | 82.8 |
MS.gene33084.t1 | MTR_1g079790 | 25.641 | 195 | 131 | 4 | 337 | 521 | 327 | 517 | 2.69e-11 | 68.2 |
MS.gene33084.t1 | MTR_1g079790 | 25.641 | 195 | 131 | 4 | 337 | 521 | 327 | 517 | 5.15e-11 | 67.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene33084.t1 | AT5G10720 | 56.098 | 1025 | 331 | 19 | 1 | 1010 | 1 | 921 | 0.0 | 1056 |
MS.gene33084.t1 | AT5G10680 | 50.581 | 172 | 72 | 4 | 5 | 174 | 1 | 161 | 7.14e-41 | 151 |
MS.gene33084.t1 | AT5G10680 | 50.581 | 172 | 72 | 4 | 5 | 174 | 1 | 161 | 7.14e-41 | 151 |
MS.gene33084.t1 | AT2G01830 | 33.333 | 309 | 170 | 6 | 379 | 680 | 464 | 743 | 1.88e-37 | 153 |
MS.gene33084.t1 | AT2G01830 | 32.168 | 143 | 77 | 4 | 856 | 996 | 922 | 1046 | 2.57e-11 | 68.6 |
MS.gene33084.t1 | AT2G01830 | 33.333 | 309 | 170 | 6 | 379 | 680 | 475 | 754 | 2.04e-37 | 153 |
MS.gene33084.t1 | AT2G01830 | 32.168 | 143 | 77 | 4 | 856 | 996 | 933 | 1057 | 2.88e-11 | 68.6 |
MS.gene33084.t1 | AT2G01830 | 33.333 | 309 | 170 | 6 | 379 | 680 | 452 | 731 | 2.15e-37 | 152 |
MS.gene33084.t1 | AT2G01830 | 32.168 | 143 | 77 | 4 | 856 | 996 | 910 | 1034 | 2.62e-11 | 68.6 |
MS.gene33084.t1 | AT2G01830 | 33.333 | 309 | 170 | 6 | 379 | 680 | 452 | 731 | 2.15e-37 | 152 |
MS.gene33084.t1 | AT2G01830 | 32.168 | 143 | 77 | 4 | 856 | 996 | 910 | 1034 | 2.62e-11 | 68.6 |
MS.gene33084.t1 | AT2G01830 | 33.333 | 309 | 170 | 6 | 379 | 680 | 452 | 731 | 2.15e-37 | 152 |
MS.gene33084.t1 | AT2G01830 | 32.168 | 143 | 77 | 4 | 856 | 996 | 910 | 1034 | 2.62e-11 | 68.6 |
MS.gene33084.t1 | AT2G01830 | 33.333 | 309 | 170 | 6 | 379 | 680 | 452 | 731 | 2.15e-37 | 152 |
MS.gene33084.t1 | AT2G01830 | 32.168 | 143 | 77 | 4 | 856 | 996 | 910 | 1034 | 2.62e-11 | 68.6 |
MS.gene33084.t1 | AT1G27320 | 33.993 | 303 | 161 | 6 | 379 | 680 | 453 | 717 | 3.66e-37 | 152 |
MS.gene33084.t1 | AT1G27320 | 33.083 | 133 | 82 | 3 | 865 | 996 | 888 | 1014 | 4.03e-13 | 74.3 |
MS.gene33084.t1 | AT5G35750 | 33.550 | 307 | 164 | 6 | 379 | 680 | 590 | 861 | 7.02e-34 | 141 |
MS.gene33084.t1 | AT5G35750 | 33.333 | 129 | 79 | 3 | 869 | 996 | 1037 | 1159 | 3.06e-12 | 71.6 |
MS.gene33084.t1 | AT2G17820 | 25.000 | 396 | 226 | 11 | 309 | 697 | 443 | 774 | 3.16e-25 | 114 |
MS.gene33084.t1 | AT1G66340 | 37.584 | 149 | 91 | 2 | 372 | 518 | 338 | 486 | 8.40e-23 | 105 |
MS.gene33084.t1 | AT2G47430 | 27.536 | 345 | 194 | 12 | 347 | 680 | 366 | 665 | 4.01e-19 | 94.0 |
MS.gene33084.t1 | AT2G40940 | 29.545 | 220 | 121 | 6 | 338 | 524 | 282 | 500 | 1.67e-16 | 84.7 |
Find 174 sgRNAs with CRISPR-Local
Find 291 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAAAATGCACCTGTTGTTAT+TGG | 0.158249 | 1.1:+7041639 | MS.gene33084:CDS |
GAGATAAGATCGCCACTTTC+TGG | 0.209695 | 1.1:+7043001 | MS.gene33084:CDS |
TTGGTGAGATTCTTCTTCTT+TGG | 0.219070 | 1.1:-7043994 | None:intergenic |
CAAACGTCCGGTTTCGATAT+TGG | 0.225048 | 1.1:+7041332 | MS.gene33084:CDS |
GGAAGTTGAGCAAAGAAAAT+TGG | 0.237386 | 1.1:+7041257 | MS.gene33084:CDS |
TTGATCACATCTCATACTTC+TGG | 0.237521 | 1.1:-7044084 | None:intergenic |
TTTGGAACAGGTTGAATTAA+TGG | 0.245842 | 1.1:+7044736 | MS.gene33084:intron |
CATTGTTAAACGCATGATTC+TGG | 0.255787 | 1.1:-7044145 | None:intergenic |
ACTGGTCTTCTGTGACCTTT+TGG | 0.259087 | 1.1:-7044013 | None:intergenic |
AACGTTCATGCTTAGTTTCT+AGG | 0.261701 | 1.1:-7045132 | None:intergenic |
TAAAGAGCAAAGACAGCTTT+TGG | 0.270075 | 1.1:+7043066 | MS.gene33084:CDS |
CTTACAAATTATACAGATAA+AGG | 0.272256 | 1.1:+7041132 | MS.gene33084:CDS |
CATGTTATCTTCAGGAGATT+TGG | 0.286514 | 1.1:+7043093 | MS.gene33084:CDS |
AATAAAACCATTCACATTAC+AGG | 0.292769 | 1.1:+7042831 | MS.gene33084:CDS |
CCAATTCCAACCACGAACTT+TGG | 0.307599 | 1.1:+7044913 | MS.gene33084:CDS |
AACATATCTTGATCTCTTCC+TGG | 0.310422 | 1.1:-7041051 | None:intergenic |
TCTTTGGCAAATGCTGGTTC+TGG | 0.312428 | 1.1:-7043978 | None:intergenic |
GCAGACCATGCTCGAAAATA+TGG | 0.317830 | 1.1:+7044466 | MS.gene33084:CDS |
AACAATTGGAGTAAACTATA+TGG | 0.319084 | 1.1:+7042626 | MS.gene33084:CDS |
CAATTCCAACCACGAACTTT+GGG | 0.320655 | 1.1:+7044914 | MS.gene33084:CDS |
AGTATGATACTGTTGTTTAC+TGG | 0.324129 | 1.1:+7041445 | MS.gene33084:CDS |
GTTTGAAGACCATTCATAAC+TGG | 0.338515 | 1.1:-7045637 | None:intergenic |
ACATCAGTTCCAACATCTTC+TGG | 0.341534 | 1.1:-7041003 | None:intergenic |
ACAAAACCATGATAATAATA+AGG | 0.343332 | 1.1:+7045171 | MS.gene33084:CDS |
TCGGAGAGAGGATATATTAA+AGG | 0.347750 | 1.1:+7041512 | MS.gene33084:CDS |
CTATACCTACTTTATTTAGA+AGG | 0.350625 | 1.1:+7044428 | MS.gene33084:CDS |
ATTCGGATTTAACGTCGATT+TGG | 0.353565 | 1.1:-7045353 | None:intergenic |
TCTTCAACAAGAAGAATATT+CGG | 0.357068 | 1.1:-7045370 | None:intergenic |
GGCTTATTTAATGCAACATT+GGG | 0.361294 | 1.1:+7041167 | MS.gene33084:CDS |
GCAATGGTGCTGCAGCTGTC+TGG | 0.366539 | 1.1:-7043592 | None:intergenic |
CCAAAGTTCGTGGTTGGAAT+TGG | 0.374939 | 1.1:-7044913 | None:intergenic |
AGCATGGATGTCGTGAATAA+TGG | 0.377420 | 1.1:+7045445 | MS.gene33084:CDS |
TTGGATGTCATGTTATCTTC+AGG | 0.380119 | 1.1:+7043085 | MS.gene33084:CDS |
CATGCACCTTATTATTATCA+TGG | 0.383722 | 1.1:-7045177 | None:intergenic |
CTAGAGTTTGCACTACCATT+TGG | 0.384833 | 1.1:-7045208 | None:intergenic |
TTCGAGGAAGAGATTAGTTA+TGG | 0.399361 | 1.1:+7041303 | MS.gene33084:CDS |
ATTACCTCTTCTTGTAAACT+TGG | 0.403224 | 1.1:-7042285 | None:intergenic |
AACAGTTGGAGGCGAGTATT+CGG | 0.405955 | 1.1:+7041493 | MS.gene33084:CDS |
AATTGGAAGCTACAAAATTC+AGG | 0.406669 | 1.1:+7043543 | MS.gene33084:CDS |
TGATCACATCTCATACTTCT+GGG | 0.407144 | 1.1:-7044083 | None:intergenic |
TGATGATCCAGATGATCTTT+CGG | 0.409319 | 1.1:+7044850 | MS.gene33084:CDS |
ACCTGTTGTTATTGGCCATC+AGG | 0.410974 | 1.1:+7041647 | MS.gene33084:CDS |
AAGAGAGAAGTAATGGAGAA+AGG | 0.411442 | 1.1:+7042507 | MS.gene33084:CDS |
TCTTCTTCTTTGGCAAATGC+TGG | 0.415639 | 1.1:-7043984 | None:intergenic |
CAGTCAACTATTTCAGCAAA+TGG | 0.416796 | 1.1:+7044032 | MS.gene33084:CDS |
TCAAGTAACATCATTTCAAA+TGG | 0.417988 | 1.1:+7045028 | MS.gene33084:CDS |
ATGTATAGGAGCTATGAAAT+TGG | 0.423052 | 1.1:+7043526 | MS.gene33084:intron |
GAAGTGTTACATACCTCAAT+AGG | 0.423152 | 1.1:-7043656 | None:intergenic |
CTTATGAGGAAACAGGCAAT+TGG | 0.427919 | 1.1:+7045677 | MS.gene33084:CDS |
TTGGAACAGGTTGAATTAAT+GGG | 0.430242 | 1.1:+7044737 | MS.gene33084:intron |
GATCTTTCCAAGGTTGAGTC+AGG | 0.431218 | 1.1:+7043142 | MS.gene33084:CDS |
CACATTCATACTACCATACA+AGG | 0.433058 | 1.1:+7044805 | MS.gene33084:CDS |
AAATATGGAGGCACAGGTCT+AGG | 0.436640 | 1.1:+7044481 | MS.gene33084:CDS |
TCGAGGAAGAGATTAGTTAT+GGG | 0.438884 | 1.1:+7041304 | MS.gene33084:CDS |
AAGATCTACCGGCGGCGATA+AGG | 0.439631 | 1.1:+7041376 | MS.gene33084:CDS |
TCAAAATAATGTCGTATGAA+TGG | 0.440366 | 1.1:-7045495 | None:intergenic |
TTCAAACAACAAAACTGATT+AGG | 0.443792 | 1.1:+7045653 | MS.gene33084:CDS |
AGATAAAGGGTCATCTCAAT+TGG | 0.444089 | 1.1:+7041146 | MS.gene33084:CDS |
ATAAGCAAGCGAACGCGGTT+CGG | 0.446744 | 1.1:+7041193 | MS.gene33084:CDS |
CAAGCTGTTGAAACCTTGTA+TGG | 0.450617 | 1.1:-7044818 | None:intergenic |
TGGGATGCTGCAAGAGAAGC+TGG | 0.451002 | 1.1:+7045697 | MS.gene33084:CDS |
ATGTAAATATTGCAGGTCAC+TGG | 0.451028 | 1.1:+7043734 | MS.gene33084:intron |
ATTAGGTCTTATGAGGAAAC+AGG | 0.451767 | 1.1:+7045670 | MS.gene33084:CDS |
CGAGGAAGAGATTAGTTATG+GGG | 0.452682 | 1.1:+7041305 | MS.gene33084:CDS |
TCAGGCCAAGAGAGGTAGTA+AGG | 0.452778 | 1.1:+7043561 | MS.gene33084:CDS |
TGGCTTATTTAATGCAACAT+TGG | 0.452961 | 1.1:+7041166 | MS.gene33084:CDS |
AAATGGAACAAATTCAATTG+AGG | 0.453149 | 1.1:+7045045 | MS.gene33084:CDS |
ACTAGCAATATGTAAACAAC+TGG | 0.455705 | 1.1:+7044504 | MS.gene33084:CDS |
TTGAAATGATGTTACTTGAA+TGG | 0.456614 | 1.1:-7045024 | None:intergenic |
AGTGTCTTGAAAAGTATCTA+AGG | 0.457868 | 1.1:+7046105 | MS.gene33084:CDS |
AGATTCCTTCACACCTGCTC+CGG | 0.458251 | 1.1:-7042475 | None:intergenic |
CTGGTTCTGGAACAACATAA+AGG | 0.460292 | 1.1:-7043965 | None:intergenic |
TCGACATCCGAAAGATCATC+TGG | 0.460612 | 1.1:-7044857 | None:intergenic |
CAGAAAATGTTAACATTGGA+AGG | 0.461173 | 1.1:+7043614 | MS.gene33084:CDS |
ACAATTGGAGTAAACTATAT+GGG | 0.461326 | 1.1:+7042627 | MS.gene33084:CDS |
AGCAAGGCAGGTGAAACAAT+TGG | 0.462061 | 1.1:+7042612 | MS.gene33084:CDS |
GATTAAACCTGTAATGTGAA+TGG | 0.463646 | 1.1:-7042838 | None:intergenic |
AAGCATGAACGTTTATGTAA+TGG | 0.472085 | 1.1:+7045142 | MS.gene33084:CDS |
CTCTACTTGCTTCATTACAT+TGG | 0.472879 | 1.1:-7045231 | None:intergenic |
ACATGCCTTACTACCTCTCT+TGG | 0.479070 | 1.1:-7043566 | None:intergenic |
AAAACTGATTAGGTCTTATG+AGG | 0.480570 | 1.1:+7045663 | MS.gene33084:CDS |
CTATACATGGCAAGATCTAC+CGG | 0.482979 | 1.1:+7041365 | MS.gene33084:CDS |
TGAACCACAACAAACATGTC+AGG | 0.483397 | 1.1:+7045279 | MS.gene33084:CDS |
GTTTACATGCCAGTTATGAA+TGG | 0.483418 | 1.1:+7045628 | MS.gene33084:CDS |
AGAATGTTTCGCCAACGGTA+TGG | 0.484664 | 1.1:+7046040 | MS.gene33084:CDS |
ACCTGATGGCCAATAACAAC+AGG | 0.484985 | 1.1:-7041648 | None:intergenic |
AGATTCTCACAAATTTAGTC+AGG | 0.486787 | 1.1:+7043777 | MS.gene33084:CDS |
ACTTTCTGGTGTTGTTAGCA+TGG | 0.486916 | 1.1:+7043015 | MS.gene33084:CDS |
TTACAAATTATACAGATAAA+GGG | 0.487288 | 1.1:+7041133 | MS.gene33084:CDS |
GGGAATGGAAATAACAGATC+AGG | 0.491945 | 1.1:+7042647 | MS.gene33084:CDS |
AGAATCTCACACAAGTTCAA+TGG | 0.492632 | 1.1:+7044974 | MS.gene33084:CDS |
AAACAAGAGAATTGAAATTG+AGG | 0.492797 | 1.1:+7041419 | MS.gene33084:CDS |
TATTTCAGCAAATGGATTGA+AGG | 0.494958 | 1.1:+7044040 | MS.gene33084:CDS |
GAACCTGTGTTTAGCAAGGC+AGG | 0.495935 | 1.1:+7042600 | MS.gene33084:CDS |
CTTTGAAAATCAGCTATAGC+TGG | 0.498599 | 1.1:-7041099 | None:intergenic |
GATGTGTACGACACTGGAAT+TGG | 0.499123 | 1.1:+7044260 | MS.gene33084:CDS |
GAGAAAGAATGGCAAAGCTA+AGG | 0.499190 | 1.1:+7042769 | MS.gene33084:CDS |
TTATGAGGAAACAGGCAATT+GGG | 0.499485 | 1.1:+7045678 | MS.gene33084:CDS |
TTTCTAACCTGACTCAACCT+TGG | 0.509156 | 1.1:-7043149 | None:intergenic |
GCATCGTCCAATATCGAAAC+CGG | 0.516844 | 1.1:-7041339 | None:intergenic |
AGATAACAAGATTAATATCA+TGG | 0.517181 | 1.1:+7045390 | MS.gene33084:CDS |
AGGAAGAGATCAAGATATGT+TGG | 0.517502 | 1.1:+7041053 | MS.gene33084:CDS |
GTTTGAAATGGTTTGTGAGA+TGG | 0.519841 | 1.1:+7040927 | None:intergenic |
GTGTGAGATTCTATGAGGCC+TGG | 0.520618 | 1.1:-7044963 | None:intergenic |
TAAAGAGAATAATCGATTCG+AGG | 0.522514 | 1.1:+7041287 | MS.gene33084:CDS |
ATTGCAGAAAATGTTAACAT+TGG | 0.525478 | 1.1:+7043610 | MS.gene33084:CDS |
GAAGATGTTGGAACTGATGT+TGG | 0.527223 | 1.1:+7041006 | MS.gene33084:CDS |
AGAAGAAGAATCTCACCAAA+AGG | 0.528810 | 1.1:+7043998 | MS.gene33084:CDS |
AATGAGAGCAAAACAAATGC+TGG | 0.532235 | 1.1:+7042964 | MS.gene33084:CDS |
ATGGCTCTGAACTGCGCGTA+TGG | 0.532419 | 1.1:-7045476 | None:intergenic |
TTTACACATCAAGGCAAAGT+TGG | 0.534123 | 1.1:+7043936 | MS.gene33084:CDS |
GCTCGAAAATATGGAGGCAC+AGG | 0.535185 | 1.1:+7044475 | MS.gene33084:CDS |
CATTTGCTGAAATAGTTGAC+TGG | 0.538486 | 1.1:-7044031 | None:intergenic |
ATCTGTGACAGTTCCTCCAC+AGG | 0.539752 | 1.1:-7041579 | None:intergenic |
GCTGTCAAGTTTACACATCA+AGG | 0.539918 | 1.1:+7043927 | MS.gene33084:CDS |
TGATATACTTGATCTTTCCA+AGG | 0.542061 | 1.1:+7043132 | MS.gene33084:CDS |
AGCCGATGATATACCTATTG+AGG | 0.543862 | 1.1:+7043643 | MS.gene33084:CDS |
AAAAGCGAGCCCAAAGTTCG+TGG | 0.544177 | 1.1:-7044923 | None:intergenic |
TTTGAGTAAGAATCGTTGTC+CGG | 0.544394 | 1.1:-7045001 | None:intergenic |
TGGACGATGCTTACTATACA+TGG | 0.547039 | 1.1:+7041352 | MS.gene33084:CDS |
ATGCTAACAACACCAGAAAG+TGG | 0.550524 | 1.1:-7043013 | None:intergenic |
AACAAACATGTCAGGGTCAA+GGG | 0.550696 | 1.1:+7045287 | MS.gene33084:CDS |
GCGAGCCCAAAGTTCGTGGT+TGG | 0.551447 | 1.1:-7044919 | None:intergenic |
TACAAAATTCAGGCCAAGAG+AGG | 0.552848 | 1.1:+7043553 | MS.gene33084:CDS |
TGGAGTAAACTATATGGGAA+TGG | 0.555183 | 1.1:+7042632 | MS.gene33084:CDS |
GTGCATGATAGCTTACCAAA+TGG | 0.555791 | 1.1:+7045193 | MS.gene33084:CDS |
GACACTGGAATTGGCATACC+AGG | 0.557084 | 1.1:+7044269 | MS.gene33084:CDS |
TGACCCTGACATGTTTGTTG+TGG | 0.560232 | 1.1:-7045283 | None:intergenic |
AGAAAGAATGGCAAAGCTAA+GGG | 0.561686 | 1.1:+7042770 | MS.gene33084:CDS |
TGGAACAGGTTGAATTAATG+GGG | 0.566185 | 1.1:+7044738 | MS.gene33084:intron |
CAACAAACATGTCAGGGTCA+AGG | 0.567768 | 1.1:+7045286 | MS.gene33084:CDS |
CAATCTTAGCAAACAAAGGA+AGG | 0.568976 | 1.1:+7041236 | MS.gene33084:CDS |
CACAAATGCGTCCATACCGT+TGG | 0.570023 | 1.1:-7046051 | None:intergenic |
ACGCATGATTCTGGATAGGA+TGG | 0.570519 | 1.1:-7044136 | None:intergenic |
CGTTGTGATGTGTACGACAC+TGG | 0.576348 | 1.1:+7044254 | MS.gene33084:CDS |
ATGTACCTTCTAAATAAAGT+AGG | 0.578318 | 1.1:-7044433 | None:intergenic |
AACTTGTGTGAGATTCTATG+AGG | 0.581575 | 1.1:-7044968 | None:intergenic |
TTAAACGCATGATTCTGGAT+AGG | 0.582689 | 1.1:-7044140 | None:intergenic |
TCACTTCTAATGGATCCACC+AGG | 0.589068 | 1.1:+7044945 | MS.gene33084:CDS |
TCACCTGCCTTGCTAAACAC+AGG | 0.591633 | 1.1:-7042603 | None:intergenic |
AAGTCAATGATGAAGCAGCT+AGG | 0.595119 | 1.1:+7045418 | MS.gene33084:CDS |
GAGGAAGAGATTAGTTATGG+GGG | 0.595191 | 1.1:+7041306 | MS.gene33084:CDS |
CATCTCATACTTCTGGGTGA+TGG | 0.595990 | 1.1:-7044077 | None:intergenic |
TTTCACCGGAGCAGGTGTGA+AGG | 0.596051 | 1.1:+7042470 | MS.gene33084:CDS |
AACATGTCAGGGTCAAGGGA+AGG | 0.598087 | 1.1:+7045291 | MS.gene33084:CDS |
GGAGGCGAGTATTCGGAGAG+AGG | 0.602582 | 1.1:+7041500 | MS.gene33084:CDS |
TACCTCAATAGGTATATCAT+CGG | 0.603020 | 1.1:-7043645 | None:intergenic |
TTGACAATCTTAGCAAACAA+AGG | 0.607034 | 1.1:+7041232 | MS.gene33084:CDS |
TGTAGAACCTGTGTTTAGCA+AGG | 0.614185 | 1.1:+7042596 | MS.gene33084:CDS |
TGATTGTATTGAAGACATGA+TGG | 0.615316 | 1.1:+7040954 | MS.gene33084:CDS |
GGAGTATAAGCAAGCGAACG+CGG | 0.616053 | 1.1:+7041188 | MS.gene33084:CDS |
TTGGAATTGGAAGAATCCCT+CGG | 0.616918 | 1.1:-7044900 | None:intergenic |
GAAGCAGCTAGGATATAGCA+TGG | 0.617920 | 1.1:+7045429 | MS.gene33084:CDS |
GCTGAAGAATGTTTCGCCAA+CGG | 0.618188 | 1.1:+7046035 | MS.gene33084:CDS |
TCAATGTGGCCAGAAGATGT+TGG | 0.623443 | 1.1:+7040994 | MS.gene33084:CDS |
CTGTTGTTTACTGGAAACAA+CGG | 0.624782 | 1.1:+7041454 | MS.gene33084:CDS |
GAACCACAACAAACATGTCA+GGG | 0.628011 | 1.1:+7045280 | MS.gene33084:CDS |
GGAACAGGTTGAATTAATGG+GGG | 0.643012 | 1.1:+7044739 | MS.gene33084:intron |
TGAGATTCTATGAGGCCTGG+TGG | 0.645843 | 1.1:-7044960 | None:intergenic |
AAGACAATCATCACCTGTGG+AGG | 0.647566 | 1.1:+7041566 | MS.gene33084:CDS |
AATTGCAGTTCAGAAAGCAA+AGG | 0.648370 | 1.1:+7042797 | MS.gene33084:CDS |
TGAAAGACAATCATCACCTG+TGG | 0.652639 | 1.1:+7041563 | MS.gene33084:CDS |
AAAGCGCATCCACATTGTTG+CGG | 0.653392 | 1.1:+7045768 | MS.gene33084:CDS |
TTGAAGAGTTATCTTCAATG+TGG | 0.654257 | 1.1:+7040980 | MS.gene33084:CDS |
AACGAAGATGACACAACCGA+GGG | 0.659560 | 1.1:+7044884 | MS.gene33084:CDS |
GACCATGCTCGAAAATATGG+AGG | 0.667505 | 1.1:+7044469 | MS.gene33084:CDS |
GAACAGGTTGAATTAATGGG+GGG | 0.672744 | 1.1:+7044740 | MS.gene33084:intron |
GGATGTCGTGAATAATGGAG+TGG | 0.687300 | 1.1:+7045450 | MS.gene33084:CDS |
TAACGAAGATGACACAACCG+AGG | 0.691038 | 1.1:+7044883 | MS.gene33084:CDS |
GTGACTAGCAAAGAACATTG+TGG | 0.699673 | 1.1:+7044773 | MS.gene33084:CDS |
GTATGGTAGTATGAATGTGA+AGG | 0.713387 | 1.1:-7044801 | None:intergenic |
AATTGCTCACCGCAACAATG+TGG | 0.726029 | 1.1:-7045777 | None:intergenic |
ATTCAACTGAAACAACAGTG+TGG | 0.734063 | 1.1:+7044228 | MS.gene33084:CDS |
TACATGGCAAGATCTACCGG+CGG | 0.803486 | 1.1:+7041368 | MS.gene33084:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAATTCATATATTAAGATT+TGG | - | chr1.1:7042871-7042890 | None:intergenic | 10.0% |
!! | TTAAATTATATATCTTCTAT+TGG | + | chr1.1:7041954-7041973 | MS.gene33084:intron | 10.0% |
!! | TTTATACAATAAAAAAACTT+AGG | + | chr1.1:7045890-7045909 | MS.gene33084:intron | 10.0% |
!!! | AATAATTTGATAACAAAAAA+TGG | - | chr1.1:7043184-7043203 | None:intergenic | 10.0% |
!! | TGAATTAAACTTATAACTAA+AGG | - | chr1.1:7044589-7044608 | None:intergenic | 15.0% |
!! | TTACAAATTATACAGATAAA+GGG | + | chr1.1:7041133-7041152 | MS.gene33084:CDS | 15.0% |
!!! | AATGAATTTTTCAATCTAAA+AGG | + | chr1.1:7042028-7042047 | MS.gene33084:intron | 15.0% |
!!! | ATTTTTAAGTGTAAATTACT+TGG | - | chr1.1:7043708-7043727 | None:intergenic | 15.0% |
!!! | TGTTATTTTGGTTTTTTTTA+AGG | + | chr1.1:7042677-7042696 | MS.gene33084:intron | 15.0% |
!! | ACAAAACCATGATAATAATA+AGG | + | chr1.1:7045171-7045190 | MS.gene33084:CDS | 20.0% |
!! | AGATAACAAGATTAATATCA+TGG | + | chr1.1:7045390-7045409 | MS.gene33084:CDS | 20.0% |
!! | CTTACAAATTATACAGATAA+AGG | + | chr1.1:7041132-7041151 | MS.gene33084:CDS | 20.0% |
!! | TATATCTAATAAGATTTCCT+TGG | + | chr1.1:7044712-7044731 | MS.gene33084:intron | 20.0% |
!!! | TAATTTTCTCGAATTATTAG+CGG | + | chr1.1:7041814-7041833 | MS.gene33084:intron | 20.0% |
!!! | TACTTTATTTTATCCAAACA+AGG | - | chr1.1:7043241-7043260 | None:intergenic | 20.0% |
!!! | TCAATAGATGATTTTTATCA+TGG | - | chr1.1:7043387-7043406 | None:intergenic | 20.0% |
!!! | TCAATTCTAAAACAAAAGAA+AGG | - | chr1.1:7044315-7044334 | None:intergenic | 20.0% |
!!! | TCAGGTAAAAATTGTTATTT+TGG | + | chr1.1:7042665-7042684 | MS.gene33084:intron | 20.0% |
!!! | TTAGTTAAGAGTTTGTTAAT+CGG | - | chr1.1:7044689-7044708 | None:intergenic | 20.0% |
!!! | TTTTAGTTGATTCATCATTT+TGG | + | chr1.1:7041980-7041999 | MS.gene33084:intron | 20.0% |
! | AAACAAGAGAATTGAAATTG+AGG | + | chr1.1:7041419-7041438 | MS.gene33084:CDS | 25.0% |
! | AAATGGAACAAATTCAATTG+AGG | + | chr1.1:7045045-7045064 | MS.gene33084:CDS | 25.0% |
! | AACAATTGGAGTAAACTATA+TGG | + | chr1.1:7042626-7042645 | MS.gene33084:CDS | 25.0% |
! | AATAAAACCATTCACATTAC+AGG | + | chr1.1:7042831-7042850 | MS.gene33084:CDS | 25.0% |
! | ACAATTGGAGTAAACTATAT+GGG | + | chr1.1:7042627-7042646 | MS.gene33084:CDS | 25.0% |
! | ATGTACCTTCTAAATAAAGT+AGG | - | chr1.1:7044436-7044455 | None:intergenic | 25.0% |
! | ATTGCAGAAAATGTTAACAT+TGG | + | chr1.1:7043610-7043629 | MS.gene33084:CDS | 25.0% |
! | CAACTCATGTTTAAATACTA+CGG | - | chr1.1:7042077-7042096 | None:intergenic | 25.0% |
! | CAATAAAAAAACTTAGGAAG+TGG | + | chr1.1:7045896-7045915 | MS.gene33084:intron | 25.0% |
! | CTAAAGGAAACTAAAGATTA+AGG | - | chr1.1:7044573-7044592 | None:intergenic | 25.0% |
! | TAAATTACTTGGCATTTATC+TGG | - | chr1.1:7043697-7043716 | None:intergenic | 25.0% |
! | TAATAAGATTTCCTTGGATT+TGG | + | chr1.1:7044718-7044737 | MS.gene33084:intron | 25.0% |
! | TATCTGGTAATAATCAAGTA+TGG | - | chr1.1:7043681-7043700 | None:intergenic | 25.0% |
! | TCAAAATAATGTCGTATGAA+TGG | - | chr1.1:7045498-7045517 | None:intergenic | 25.0% |
! | TCAAGTAACATCATTTCAAA+TGG | + | chr1.1:7045028-7045047 | MS.gene33084:CDS | 25.0% |
! | TCTTCAACAAGAAGAATATT+CGG | - | chr1.1:7045373-7045392 | None:intergenic | 25.0% |
! | TTCAAACAACAAAACTGATT+AGG | + | chr1.1:7045653-7045672 | MS.gene33084:CDS | 25.0% |
! | TTCAGTTTAAATACAAGTGT+CGG | - | chr1.1:7041789-7041808 | None:intergenic | 25.0% |
! | TTCTTTCATGTAAATATTGC+AGG | + | chr1.1:7043727-7043746 | MS.gene33084:intron | 25.0% |
!! | AATGTTAACATTTTCTGCAA+TGG | - | chr1.1:7043611-7043630 | None:intergenic | 25.0% |
!! | CTATACCTACTTTATTTAGA+AGG | + | chr1.1:7044428-7044447 | MS.gene33084:CDS | 25.0% |
!! | GATTAGTTATCCTTATCAAT+CGG | - | chr1.1:7044645-7044664 | None:intergenic | 25.0% |
!! | TAATTTTTCCAGGACATTAT+AGG | + | chr1.1:7042429-7042448 | MS.gene33084:intron | 25.0% |
!! | TAGGAAGTGGTTTTTAATAT+TGG | + | chr1.1:7045909-7045928 | MS.gene33084:intron | 25.0% |
!! | TTGAAATGATGTTACTTGAA+TGG | - | chr1.1:7045027-7045046 | None:intergenic | 25.0% |
!! | TTGATAACAAAAAATGGTGA+AGG | - | chr1.1:7043178-7043197 | None:intergenic | 25.0% |
!!! | AAAGTTATTTCCTTTTTTGC+AGG | - | chr1.1:7042537-7042556 | None:intergenic | 25.0% |
!!! | AGATTTTAAGAGAGAAGTAA+TGG | + | chr1.1:7042500-7042519 | MS.gene33084:CDS | 25.0% |
!!! | TTATCTGTTTTCTCTAGAAT+CGG | + | chr1.1:7043814-7043833 | MS.gene33084:intron | 25.0% |
!!! | TTATGCGATTTTTTGTGATA+CGG | + | chr1.1:7045581-7045600 | MS.gene33084:intron | 25.0% |
!!! | TTCATACGACATTATTTTGA+TGG | + | chr1.1:7045498-7045517 | MS.gene33084:CDS | 25.0% |
AAGCATGAACGTTTATGTAA+TGG | + | chr1.1:7045142-7045161 | MS.gene33084:CDS | 30.0% | |
AATAAGTCGAAAACATCTCA+TGG | + | chr1.1:7043298-7043317 | MS.gene33084:intron | 30.0% | |
AATAATATCGAGAAAATCGC+AGG | + | chr1.1:7042737-7042756 | MS.gene33084:intron | 30.0% | |
AATTGGAAGCTACAAAATTC+AGG | + | chr1.1:7043543-7043562 | MS.gene33084:CDS | 30.0% | |
ACTAGCAATATGTAAACAAC+TGG | + | chr1.1:7044504-7044523 | MS.gene33084:CDS | 30.0% | |
AGATTCTCACAAATTTAGTC+AGG | + | chr1.1:7043777-7043796 | MS.gene33084:CDS | 30.0% | |
ATGTATAGGAGCTATGAAAT+TGG | + | chr1.1:7043526-7043545 | MS.gene33084:intron | 30.0% | |
ATTACCTCTTCTTGTAAACT+TGG | - | chr1.1:7042288-7042307 | None:intergenic | 30.0% | |
CAATTCAACATAGAAAAACC+AGG | + | chr1.1:7041033-7041052 | MS.gene33084:CDS | 30.0% | |
CAGAAAATGTTAACATTGGA+AGG | + | chr1.1:7043614-7043633 | MS.gene33084:CDS | 30.0% | |
CATGCACCTTATTATTATCA+TGG | - | chr1.1:7045180-7045199 | None:intergenic | 30.0% | |
GAATGTTAAAACAGAAATCC+TGG | - | chr1.1:7042210-7042229 | None:intergenic | 30.0% | |
GATTAAACCTGTAATGTGAA+TGG | - | chr1.1:7042841-7042860 | None:intergenic | 30.0% | |
GGCTTATTTAATGCAACATT+GGG | + | chr1.1:7041167-7041186 | MS.gene33084:CDS | 30.0% | |
TACCTCAATAGGTATATCAT+CGG | - | chr1.1:7043648-7043667 | None:intergenic | 30.0% | |
TGATATACTTGATCTTTCCA+AGG | + | chr1.1:7043132-7043151 | MS.gene33084:CDS | 30.0% | |
TGATTGTATTGAAGACATGA+TGG | + | chr1.1:7040954-7040973 | MS.gene33084:CDS | 30.0% | |
TGGCTTATTTAATGCAACAT+TGG | + | chr1.1:7041166-7041185 | MS.gene33084:CDS | 30.0% | |
TTGAAGAGTTATCTTCAATG+TGG | + | chr1.1:7040980-7040999 | MS.gene33084:CDS | 30.0% | |
TTGACAATCTTAGCAAACAA+AGG | + | chr1.1:7041232-7041251 | MS.gene33084:CDS | 30.0% | |
TTTACAGAAACCGATTGATA+AGG | + | chr1.1:7044632-7044651 | MS.gene33084:intron | 30.0% | |
! | AAAACTGATTAGGTCTTATG+AGG | + | chr1.1:7045663-7045682 | MS.gene33084:CDS | 30.0% |
! | AGTATGATACTGTTGTTTAC+TGG | + | chr1.1:7041445-7041464 | MS.gene33084:CDS | 30.0% |
! | CAAGACACTCTTTCAATTTT+AGG | - | chr1.1:7046094-7046113 | None:intergenic | 30.0% |
! | CAGAAATTTTATGCAGCTTT+TGG | - | chr1.1:7042369-7042388 | None:intergenic | 30.0% |
! | GTTTTTCGTATCTATTAACC+AGG | + | chr1.1:7042189-7042208 | MS.gene33084:intron | 30.0% |
! | TACTTGCTCATAATTTTTCC+AGG | + | chr1.1:7042419-7042438 | MS.gene33084:intron | 30.0% |
! | TCATAGCTTGCAAAAAATCT+TGG | + | chr1.1:7041880-7041899 | MS.gene33084:intron | 30.0% |
! | TCGCATAATGTGTGAATTTT+AGG | - | chr1.1:7045569-7045588 | None:intergenic | 30.0% |
! | TTGCAAAAAATCTTGGTGTA+TGG | + | chr1.1:7041887-7041906 | MS.gene33084:intron | 30.0% |
! | TTGGAACAGGTTGAATTAAT+GGG | + | chr1.1:7044737-7044756 | MS.gene33084:intron | 30.0% |
! | TTTGGAACAGGTTGAATTAA+TGG | + | chr1.1:7044736-7044755 | MS.gene33084:intron | 30.0% |
! | TTTTCCAAGTTTACAAGAAG+AGG | + | chr1.1:7042281-7042300 | MS.gene33084:CDS | 30.0% |
!! | AGATTTTGAAAAACAGTTGG+AGG | + | chr1.1:7041482-7041501 | MS.gene33084:CDS | 30.0% |
!! | AGCTGATTTTCAAAGACTAA+TGG | + | chr1.1:7041107-7041126 | MS.gene33084:CDS | 30.0% |
!! | AGTGTCTTGAAAAGTATCTA+AGG | + | chr1.1:7046105-7046124 | MS.gene33084:CDS | 30.0% |
!! | GCAAGATTTTGAAAAACAGT+TGG | + | chr1.1:7041479-7041498 | MS.gene33084:CDS | 30.0% |
!! | TAAAGAGAATAATCGATTCG+AGG | + | chr1.1:7041287-7041306 | MS.gene33084:CDS | 30.0% |
!! | TATTTCAGCAAATGGATTGA+AGG | + | chr1.1:7044040-7044059 | MS.gene33084:CDS | 30.0% |
!! | TTCAATTTTAGGAATGTCAC+TGG | - | chr1.1:7046083-7046102 | None:intergenic | 30.0% |
!!! | ACTTTTGAGACAGAACTATT+TGG | + | chr1.1:7042552-7042571 | MS.gene33084:CDS | 30.0% |
AAACAACTGGTAAACTCTTC+CGG | + | chr1.1:7044517-7044536 | MS.gene33084:intron | 35.0% | |
AACATATCTTGATCTCTTCC+TGG | - | chr1.1:7041054-7041073 | None:intergenic | 35.0% | |
AACGTTCATGCTTAGTTTCT+AGG | - | chr1.1:7045135-7045154 | None:intergenic | 35.0% | |
AACTTGTGTGAGATTCTATG+AGG | - | chr1.1:7044971-7044990 | None:intergenic | 35.0% | |
AATGAGAGCAAAACAAATGC+TGG | + | chr1.1:7042964-7042983 | MS.gene33084:CDS | 35.0% | |
AATTGCAGTTCAGAAAGCAA+AGG | + | chr1.1:7042797-7042816 | MS.gene33084:CDS | 35.0% | |
ACATTCTGATTATCTCTTGC+AGG | + | chr1.1:7042224-7042243 | MS.gene33084:intron | 35.0% | |
ACTCACTGTAATATACCTGA+TGG | - | chr1.1:7041665-7041684 | None:intergenic | 35.0% | |
AGAAAGAATGGCAAAGCTAA+GGG | + | chr1.1:7042770-7042789 | MS.gene33084:CDS | 35.0% | |
AGAAGAAGAATCTCACCAAA+AGG | + | chr1.1:7043998-7044017 | MS.gene33084:CDS | 35.0% | |
AGAATCTCACACAAGTTCAA+TGG | + | chr1.1:7044974-7044993 | MS.gene33084:CDS | 35.0% | |
AGATAAAGGGTCATCTCAAT+TGG | + | chr1.1:7041146-7041165 | MS.gene33084:CDS | 35.0% | |
AGGAAGAGATCAAGATATGT+TGG | + | chr1.1:7041053-7041072 | MS.gene33084:CDS | 35.0% | |
ATCAGAACTACGATACTTAG+AGG | - | chr1.1:7043886-7043905 | None:intergenic | 35.0% | |
ATGTAAATATTGCAGGTCAC+TGG | + | chr1.1:7043734-7043753 | MS.gene33084:intron | 35.0% | |
ATTCAACTGAAACAACAGTG+TGG | + | chr1.1:7044228-7044247 | MS.gene33084:CDS | 35.0% | |
CAAAATGCACCTGTTGTTAT+TGG | + | chr1.1:7041639-7041658 | MS.gene33084:CDS | 35.0% | |
CAAACAACAACAGACAACTT+AGG | + | chr1.1:7045823-7045842 | MS.gene33084:intron | 35.0% | |
CAAGCTATGAAACACGTATA+CGG | - | chr1.1:7041870-7041889 | None:intergenic | 35.0% | |
CAATCTTAGCAAACAAAGGA+AGG | + | chr1.1:7041236-7041255 | MS.gene33084:CDS | 35.0% | |
CACAATTACTAACACATACC+TGG | - | chr1.1:7044290-7044309 | None:intergenic | 35.0% | |
CACATTCATACTACCATACA+AGG | + | chr1.1:7044805-7044824 | MS.gene33084:CDS | 35.0% | |
CAGTCAACTATTTCAGCAAA+TGG | + | chr1.1:7044032-7044051 | MS.gene33084:CDS | 35.0% | |
CATGTTATCTTCAGGAGATT+TGG | + | chr1.1:7043093-7043112 | MS.gene33084:CDS | 35.0% | |
CATTACTTGCAAATGAAGCA+CGG | + | chr1.1:7041711-7041730 | MS.gene33084:intron | 35.0% | |
CATTGTCTCCTCTATTACAA+GGG | - | chr1.1:7042948-7042967 | None:intergenic | 35.0% | |
CATTGTTAAACGCATGATTC+TGG | - | chr1.1:7044148-7044167 | None:intergenic | 35.0% | |
CCACTACACAACTTATGTAT+AGG | + | chr1.1:7043512-7043531 | MS.gene33084:intron | 35.0% | |
CCTATACATAAGTTGTGTAG+TGG | - | chr1.1:7043515-7043534 | None:intergenic | 35.0% | |
GGAAGTTGAGCAAAGAAAAT+TGG | + | chr1.1:7041257-7041276 | MS.gene33084:CDS | 35.0% | |
GGTGAGAAAAAGAGAAAGAA+TGG | + | chr1.1:7042758-7042777 | MS.gene33084:intron | 35.0% | |
GTATGGTAGTATGAATGTGA+AGG | - | chr1.1:7044804-7044823 | None:intergenic | 35.0% | |
GTCAAATGAAAATGCTTTGC+CGG | - | chr1.1:7044539-7044558 | None:intergenic | 35.0% | |
GTTGTAATGTGACACAGAAA+AGG | + | chr1.1:7044405-7044424 | MS.gene33084:intron | 35.0% | |
GTTTACATGCCAGTTATGAA+TGG | + | chr1.1:7045628-7045647 | MS.gene33084:CDS | 35.0% | |
GTTTGAAGACCATTCATAAC+TGG | - | chr1.1:7045640-7045659 | None:intergenic | 35.0% | |
GTTTGACACTTTCACTTTAC+AGG | + | chr1.1:7045603-7045622 | MS.gene33084:intron | 35.0% | |
TCAGAACTACGATACTTAGA+GGG | - | chr1.1:7043885-7043904 | None:intergenic | 35.0% | |
TCATCTGCATCAATATGAGA+TGG | - | chr1.1:7045992-7046011 | None:intergenic | 35.0% | |
TCATTGTCTCCTCTATTACA+AGG | - | chr1.1:7042949-7042968 | None:intergenic | 35.0% | |
TCGGAGAGAGGATATATTAA+AGG | + | chr1.1:7041512-7041531 | MS.gene33084:CDS | 35.0% | |
TGATCACATCTCATACTTCT+GGG | - | chr1.1:7044086-7044105 | None:intergenic | 35.0% | |
TGATGATCCAGATGATCTTT+CGG | + | chr1.1:7044850-7044869 | MS.gene33084:CDS | 35.0% | |
TGGAGTAAACTATATGGGAA+TGG | + | chr1.1:7042632-7042651 | MS.gene33084:CDS | 35.0% | |
TTAAACGCATGATTCTGGAT+AGG | - | chr1.1:7044143-7044162 | None:intergenic | 35.0% | |
TTATGAGGAAACAGGCAATT+GGG | + | chr1.1:7045678-7045697 | MS.gene33084:CDS | 35.0% | |
TTCTTGATCCCTTGTAATAG+AGG | + | chr1.1:7042937-7042956 | MS.gene33084:intron | 35.0% | |
TTGATCACATCTCATACTTC+TGG | - | chr1.1:7044087-7044106 | None:intergenic | 35.0% | |
TTGGATGTCATGTTATCTTC+AGG | + | chr1.1:7043085-7043104 | MS.gene33084:CDS | 35.0% | |
TTGGTGAGATTCTTCTTCTT+TGG | - | chr1.1:7043997-7044016 | None:intergenic | 35.0% | |
TTTACACATCAAGGCAAAGT+TGG | + | chr1.1:7043936-7043955 | MS.gene33084:CDS | 35.0% | |
TTTGAGTAAGAATCGTTGTC+CGG | - | chr1.1:7045004-7045023 | None:intergenic | 35.0% | |
! | AAAAATCTTGGTGTATGGCT+TGG | + | chr1.1:7041892-7041911 | MS.gene33084:intron | 35.0% |
! | AAGAGAGAAGTAATGGAGAA+AGG | + | chr1.1:7042507-7042526 | MS.gene33084:CDS | 35.0% |
! | AAGGAAGCACAGATAAAAGT+TGG | - | chr1.1:7043857-7043876 | None:intergenic | 35.0% |
! | ACACAAGTTCAATGGTTTTC+CGG | + | chr1.1:7044982-7045001 | MS.gene33084:CDS | 35.0% |
! | ACAGATGTCGAAATTTTCAC+CGG | + | chr1.1:7042456-7042475 | MS.gene33084:CDS | 35.0% |
! | ACTGTTTTCATAAGCTGTGT+TGG | + | chr1.1:7043263-7043282 | MS.gene33084:intron | 35.0% |
! | ATTAGGTCTTATGAGGAAAC+AGG | + | chr1.1:7045670-7045689 | MS.gene33084:CDS | 35.0% |
! | ATTCGGATTTAACGTCGATT+TGG | - | chr1.1:7045356-7045375 | None:intergenic | 35.0% |
! | CATTTGCTGAAATAGTTGAC+TGG | - | chr1.1:7044034-7044053 | None:intergenic | 35.0% |
! | CTGTTGTTTACTGGAAACAA+CGG | + | chr1.1:7041454-7041473 | MS.gene33084:CDS | 35.0% |
! | CTTTGAAAATCAGCTATAGC+TGG | - | chr1.1:7041102-7041121 | None:intergenic | 35.0% |
! | GAAGTGTTACATACCTCAAT+AGG | - | chr1.1:7043659-7043678 | None:intergenic | 35.0% |
! | TAAAGAGCAAAGACAGCTTT+TGG | + | chr1.1:7043066-7043085 | MS.gene33084:CDS | 35.0% |
! | TCGAGGAAGAGATTAGTTAT+GGG | + | chr1.1:7041304-7041323 | MS.gene33084:CDS | 35.0% |
! | TGGAACAGGTTGAATTAATG+GGG | + | chr1.1:7044738-7044757 | MS.gene33084:intron | 35.0% |
! | TTCGAGGAAGAGATTAGTTA+TGG | + | chr1.1:7041303-7041322 | MS.gene33084:CDS | 35.0% |
!! | CTGTTTTTCCTATAATGTCC+TGG | - | chr1.1:7042440-7042459 | None:intergenic | 35.0% |
!! | TTAAATACAAGTGTCGGTGT+CGG | - | chr1.1:7041783-7041802 | None:intergenic | 35.0% |
!!! | CTGGAGATGTTTTAAGGATT+CGG | + | chr1.1:7043753-7043772 | MS.gene33084:CDS | 35.0% |
!!! | TGTTTTCTCTAGAATCGGAT+TGG | + | chr1.1:7043819-7043838 | MS.gene33084:intron | 35.0% |
AACAAACATGTCAGGGTCAA+GGG | + | chr1.1:7045287-7045306 | MS.gene33084:CDS | 40.0% | |
AAGTCAATGATGAAGCAGCT+AGG | + | chr1.1:7045418-7045437 | MS.gene33084:CDS | 40.0% | |
ACATCAGTTCCAACATCTTC+TGG | - | chr1.1:7041006-7041025 | None:intergenic | 40.0% | |
AGAACTACGATACTTAGAGG+GGG | - | chr1.1:7043883-7043902 | None:intergenic | 40.0% | |
AGCATGGATGTCGTGAATAA+TGG | + | chr1.1:7045445-7045464 | MS.gene33084:CDS | 40.0% | |
AGCCGATGATATACCTATTG+AGG | + | chr1.1:7043643-7043662 | MS.gene33084:CDS | 40.0% | |
ATGAAACACGTATACGGACA+CGG | - | chr1.1:7041864-7041883 | None:intergenic | 40.0% | |
ATGCTAACAACACCAGAAAG+TGG | - | chr1.1:7043016-7043035 | None:intergenic | 40.0% | |
CAAGCTGTTGAAACCTTGTA+TGG | - | chr1.1:7044821-7044840 | None:intergenic | 40.0% | |
CAATTCCAACCACGAACTTT+GGG | + | chr1.1:7044914-7044933 | MS.gene33084:CDS | 40.0% | |
CAGAACTACGATACTTAGAG+GGG | - | chr1.1:7043884-7043903 | None:intergenic | 40.0% | |
CTAGAGTTTGCACTACCATT+TGG | - | chr1.1:7045211-7045230 | None:intergenic | 40.0% | |
CTATACATGGCAAGATCTAC+CGG | + | chr1.1:7041365-7041384 | MS.gene33084:CDS | 40.0% | |
CTTATGAGGAAACAGGCAAT+TGG | + | chr1.1:7045677-7045696 | MS.gene33084:CDS | 40.0% | |
GAACCACAACAAACATGTCA+GGG | + | chr1.1:7045280-7045299 | MS.gene33084:CDS | 40.0% | |
GAAGATGTTGGAACTGATGT+TGG | + | chr1.1:7041006-7041025 | MS.gene33084:CDS | 40.0% | |
GAGAAAGAATGGCAAAGCTA+AGG | + | chr1.1:7042769-7042788 | MS.gene33084:CDS | 40.0% | |
GCTGTCAAGTTTACACATCA+AGG | + | chr1.1:7043927-7043946 | MS.gene33084:CDS | 40.0% | |
GGGAATGGAAATAACAGATC+AGG | + | chr1.1:7042647-7042666 | MS.gene33084:CDS | 40.0% | |
GTGACTAGCAAAGAACATTG+TGG | + | chr1.1:7044773-7044792 | MS.gene33084:CDS | 40.0% | |
GTGCATGATAGCTTACCAAA+TGG | + | chr1.1:7045193-7045212 | MS.gene33084:CDS | 40.0% | |
TACAAAATTCAGGCCAAGAG+AGG | + | chr1.1:7043553-7043572 | MS.gene33084:CDS | 40.0% | |
TCTCGAATTATTAGCGGTGT+CGG | + | chr1.1:7041820-7041839 | MS.gene33084:intron | 40.0% | |
TCTTCTTCTTTGGCAAATGC+TGG | - | chr1.1:7043987-7044006 | None:intergenic | 40.0% | |
TGAAAGACAATCATCACCTG+TGG | + | chr1.1:7041563-7041582 | MS.gene33084:CDS | 40.0% | |
TGAACCACAACAAACATGTC+AGG | + | chr1.1:7045279-7045298 | MS.gene33084:CDS | 40.0% | |
TGGACGATGCTTACTATACA+TGG | + | chr1.1:7041352-7041371 | MS.gene33084:CDS | 40.0% | |
TGTAGAACCTGTGTTTAGCA+AGG | + | chr1.1:7042596-7042615 | MS.gene33084:CDS | 40.0% | |
TGTATCCTTGCACACAATTG+CGG | - | chr1.1:7045870-7045889 | None:intergenic | 40.0% | |
TGTGAAGACTACACCTTGTT+TGG | + | chr1.1:7043225-7043244 | MS.gene33084:intron | 40.0% | |
TTCAACCTGTTCCAAATCCA+AGG | - | chr1.1:7044732-7044751 | None:intergenic | 40.0% | |
TTCAATCTAAAAGGCCGACT+CGG | + | chr1.1:7042037-7042056 | MS.gene33084:intron | 40.0% | |
TTGGAATTGGAAGAATCCCT+CGG | - | chr1.1:7044903-7044922 | None:intergenic | 40.0% | |
TTTCTAACCTGACTCAACCT+TGG | - | chr1.1:7043152-7043171 | None:intergenic | 40.0% | |
! | AGGTCACTGGAGATGTTTTA+AGG | + | chr1.1:7043747-7043766 | MS.gene33084:intron | 40.0% |
! | CGAGGAAGAGATTAGTTATG+GGG | + | chr1.1:7041305-7041324 | MS.gene33084:CDS | 40.0% |
! | GAACAGGTTGAATTAATGGG+GGG | + | chr1.1:7044740-7044759 | MS.gene33084:intron | 40.0% |
! | GAGGAAGAGATTAGTTATGG+GGG | + | chr1.1:7041306-7041325 | MS.gene33084:CDS | 40.0% |
! | GATTTCCTTGGATTTGGAAC+AGG | + | chr1.1:7044724-7044743 | MS.gene33084:intron | 40.0% |
! | GGAACAGGTTGAATTAATGG+GGG | + | chr1.1:7044739-7044758 | MS.gene33084:intron | 40.0% |
!! | ACAATGTGGATGCGCTTTTT+AGG | - | chr1.1:7045766-7045785 | None:intergenic | 40.0% |
!! | ACTTTCTGGTGTTGTTAGCA+TGG | + | chr1.1:7043015-7043034 | MS.gene33084:CDS | 40.0% |
!! | CTGGTTCTGGAACAACATAA+AGG | - | chr1.1:7043968-7043987 | None:intergenic | 40.0% |
!!! | CTTTTGAAGCTCTTGTTGCA+AGG | + | chr1.1:7042313-7042332 | MS.gene33084:intron | 40.0% |
AAAGCGCATCCACATTGTTG+CGG | + | chr1.1:7045768-7045787 | MS.gene33084:CDS | 45.0% | |
AACAGTTGGAGGCGAGTATT+CGG | + | chr1.1:7041493-7041512 | MS.gene33084:CDS | 45.0% | |
AACGAAGATGACACAACCGA+GGG | + | chr1.1:7044884-7044903 | MS.gene33084:CDS | 45.0% | |
AAGACAATCATCACCTGTGG+AGG | + | chr1.1:7041566-7041585 | MS.gene33084:CDS | 45.0% | |
AAGCTGTGTTGGAGAGCTTA+TGG | + | chr1.1:7043274-7043293 | MS.gene33084:intron | 45.0% | |
AATTGCTCACCGCAACAATG+TGG | - | chr1.1:7045780-7045799 | None:intergenic | 45.0% | |
ACATGCCTTACTACCTCTCT+TGG | - | chr1.1:7043569-7043588 | None:intergenic | 45.0% | |
ACCTGATGGCCAATAACAAC+AGG | - | chr1.1:7041651-7041670 | None:intergenic | 45.0% | |
ACGCATGATTCTGGATAGGA+TGG | - | chr1.1:7044139-7044158 | None:intergenic | 45.0% | |
AGAATGTTTCGCCAACGGTA+TGG | + | chr1.1:7046040-7046059 | MS.gene33084:CDS | 45.0% | |
AGCAAGGCAGGTGAAACAAT+TGG | + | chr1.1:7042612-7042631 | MS.gene33084:CDS | 45.0% | |
CAAACGTCCGGTTTCGATAT+TGG | + | chr1.1:7041332-7041351 | MS.gene33084:CDS | 45.0% | |
CAACAAACATGTCAGGGTCA+AGG | + | chr1.1:7045286-7045305 | MS.gene33084:CDS | 45.0% | |
CATCTCATACTTCTGGGTGA+TGG | - | chr1.1:7044080-7044099 | None:intergenic | 45.0% | |
CCAAAGTTCGTGGTTGGAAT+TGG | - | chr1.1:7044916-7044935 | None:intergenic | 45.0% | |
CCAATTCCAACCACGAACTT+TGG | + | chr1.1:7044913-7044932 | MS.gene33084:CDS | 45.0% | |
GAAGCAGCTAGGATATAGCA+TGG | + | chr1.1:7045429-7045448 | MS.gene33084:CDS | 45.0% | |
GACCATGCTCGAAAATATGG+AGG | + | chr1.1:7044469-7044488 | MS.gene33084:CDS | 45.0% | |
GATCTTTCCAAGGTTGAGTC+AGG | + | chr1.1:7043142-7043161 | MS.gene33084:CDS | 45.0% | |
GATGTGTACGACACTGGAAT+TGG | + | chr1.1:7044260-7044279 | MS.gene33084:CDS | 45.0% | |
GCAGACCATGCTCGAAAATA+TGG | + | chr1.1:7044466-7044485 | MS.gene33084:CDS | 45.0% | |
GCATCGTCCAATATCGAAAC+CGG | - | chr1.1:7041342-7041361 | None:intergenic | 45.0% | |
GCTGAAGAATGTTTCGCCAA+CGG | + | chr1.1:7046035-7046054 | MS.gene33084:CDS | 45.0% | |
TAACGAAGATGACACAACCG+AGG | + | chr1.1:7044883-7044902 | MS.gene33084:CDS | 45.0% | |
TCAATGTGGCCAGAAGATGT+TGG | + | chr1.1:7040994-7041013 | MS.gene33084:CDS | 45.0% | |
TCCACTTTACAACACCGAGT+CGG | - | chr1.1:7042054-7042073 | None:intergenic | 45.0% | |
TCGACATCCGAAAGATCATC+TGG | - | chr1.1:7044860-7044879 | None:intergenic | 45.0% | |
! | AAATATGGAGGCACAGGTCT+AGG | + | chr1.1:7044481-7044500 | MS.gene33084:CDS | 45.0% |
! | ACCTGTTGTTATTGGCCATC+AGG | + | chr1.1:7041647-7041666 | MS.gene33084:CDS | 45.0% |
! | GAGATAAGATCGCCACTTTC+TGG | + | chr1.1:7043001-7043020 | MS.gene33084:CDS | 45.0% |
! | GGATGTCGTGAATAATGGAG+TGG | + | chr1.1:7045450-7045469 | MS.gene33084:CDS | 45.0% |
! | TCACTTCTAATGGATCCACC+AGG | + | chr1.1:7044945-7044964 | MS.gene33084:CDS | 45.0% |
! | TGACCCTGACATGTTTGTTG+TGG | - | chr1.1:7045286-7045305 | None:intergenic | 45.0% |
!! | ATGTGGATGCGCTTTTTAGG+TGG | - | chr1.1:7045763-7045782 | None:intergenic | 45.0% |
!! | GAAAGGAGTGCCTGCAAAAA+AGG | + | chr1.1:7042524-7042543 | MS.gene33084:CDS | 45.0% |
!! | GGCTCGCTTTTCACTTCTAA+TGG | + | chr1.1:7044935-7044954 | MS.gene33084:CDS | 45.0% |
!! | TCTTTGGCAAATGCTGGTTC+TGG | - | chr1.1:7043981-7044000 | None:intergenic | 45.0% |
!! | TGCCTCCATATTTTCGAGCA+TGG | - | chr1.1:7044474-7044493 | None:intergenic | 45.0% |
!!! | ACTGGTCTTCTGTGACCTTT+TGG | - | chr1.1:7044016-7044035 | None:intergenic | 45.0% |
AAAAGCGAGCCCAAAGTTCG+TGG | - | chr1.1:7044926-7044945 | None:intergenic | 50.0% | |
AACATGTCAGGGTCAAGGGA+AGG | + | chr1.1:7045291-7045310 | MS.gene33084:CDS | 50.0% | |
AATGAAGCACGGACACTCCT+CGG | + | chr1.1:7041722-7041741 | MS.gene33084:intron | 50.0% | |
AGATTCCTTCACACCTGCTC+CGG | - | chr1.1:7042478-7042497 | None:intergenic | 50.0% | |
AGTCTCCGCAATTGTGTGCA+AGG | + | chr1.1:7045862-7045881 | MS.gene33084:intron | 50.0% | |
ATAAGCAAGCGAACGCGGTT+CGG | + | chr1.1:7041193-7041212 | MS.gene33084:CDS | 50.0% | |
ATCTGTGACAGTTCCTCCAC+AGG | - | chr1.1:7041582-7041601 | None:intergenic | 50.0% | |
CACAAATGCGTCCATACCGT+TGG | - | chr1.1:7046054-7046073 | None:intergenic | 50.0% | |
CCAAGTAGCTACTCTGCAGT+CGG | + | chr1.1:7042109-7042128 | MS.gene33084:intron | 50.0% | |
CGACTGCAGAGTAGCTACTT+GGG | - | chr1.1:7042111-7042130 | None:intergenic | 50.0% | |
CGATACTTAGAGGGGGTAGA+AGG | - | chr1.1:7043876-7043895 | None:intergenic | 50.0% | |
CGTTGTGATGTGTACGACAC+TGG | + | chr1.1:7044254-7044273 | MS.gene33084:CDS | 50.0% | |
GAACCTGTGTTTAGCAAGGC+AGG | + | chr1.1:7042600-7042619 | MS.gene33084:CDS | 50.0% | |
GACACTGGAATTGGCATACC+AGG | + | chr1.1:7044269-7044288 | MS.gene33084:CDS | 50.0% | |
GACTGCAGAGTAGCTACTTG+GGG | - | chr1.1:7042110-7042129 | None:intergenic | 50.0% | |
GGAGTATAAGCAAGCGAACG+CGG | + | chr1.1:7041188-7041207 | MS.gene33084:CDS | 50.0% | |
GTCGGAGACGTAAGGACTAT+TGG | + | chr1.1:7042127-7042146 | MS.gene33084:intron | 50.0% | |
GTGTGAGATTCTATGAGGCC+TGG | - | chr1.1:7044966-7044985 | None:intergenic | 50.0% | |
TACATGGCAAGATCTACCGG+CGG | + | chr1.1:7041368-7041387 | MS.gene33084:CDS | 50.0% | |
TCACCTGCCTTGCTAAACAC+AGG | - | chr1.1:7042606-7042625 | None:intergenic | 50.0% | |
TCAGGCCAAGAGAGGTAGTA+AGG | + | chr1.1:7043561-7043580 | MS.gene33084:CDS | 50.0% | |
TGAGATTCTATGAGGCCTGG+TGG | - | chr1.1:7044963-7044982 | None:intergenic | 50.0% | |
TTATGGGGGAGACAAACGTC+CGG | + | chr1.1:7041320-7041339 | MS.gene33084:CDS | 50.0% | |
! | GCTCGAAAATATGGAGGCAC+AGG | + | chr1.1:7044475-7044494 | MS.gene33084:CDS | 50.0% |
! | GTCGAAATTTTCACCGGAGC+AGG | + | chr1.1:7042462-7042481 | MS.gene33084:CDS | 50.0% |
!! | TCACTTTTCCTTATCGCCGC+CGG | - | chr1.1:7041387-7041406 | None:intergenic | 50.0% |
AAGATCTACCGGCGGCGATA+AGG | + | chr1.1:7041376-7041395 | MS.gene33084:CDS | 55.0% | |
ACGTATACGGACACGGACAC+CGG | - | chr1.1:7041857-7041876 | None:intergenic | 55.0% | |
ACTCTGCAGTCGGAGACGTA+AGG | + | chr1.1:7042119-7042138 | MS.gene33084:intron | 55.0% | |
CCGACTGCAGAGTAGCTACT+TGG | - | chr1.1:7042112-7042131 | None:intergenic | 55.0% | |
TGGGATGCTGCAAGAGAAGC+TGG | + | chr1.1:7045697-7045716 | MS.gene33084:CDS | 55.0% | |
TGTCGGACACGACATGTGTC+CGG | - | chr1.1:7041766-7041785 | None:intergenic | 55.0% | |
TTTCACCGGAGCAGGTGTGA+AGG | + | chr1.1:7042470-7042489 | MS.gene33084:CDS | 55.0% | |
!! | ATGGCTCTGAACTGCGCGTA+TGG | - | chr1.1:7045479-7045498 | None:intergenic | 55.0% |
!! | GCCGACTCGGTGTTGTAAAG+TGG | + | chr1.1:7042050-7042069 | MS.gene33084:intron | 55.0% |
ACACGACATGTGTCCGGCAC+TGG | - | chr1.1:7041760-7041779 | None:intergenic | 60.0% | |
ACTGGGACACGCCTAATCCG+AGG | - | chr1.1:7041742-7041761 | None:intergenic | 60.0% | |
CACGACATGTGTCCGGCACT+GGG | - | chr1.1:7041759-7041778 | None:intergenic | 60.0% | |
GATTAGGCGTGTCCCAGTGC+CGG | + | chr1.1:7041744-7041763 | MS.gene33084:intron | 60.0% | |
GCACGGACACTCCTCGGATT+AGG | + | chr1.1:7041728-7041747 | MS.gene33084:intron | 60.0% | |
GCGAGCCCAAAGTTCGTGGT+TGG | - | chr1.1:7044922-7044941 | None:intergenic | 60.0% | |
GGAGGCGAGTATTCGGAGAG+AGG | + | chr1.1:7041500-7041519 | MS.gene33084:CDS | 60.0% | |
!! | GCAATGGTGCTGCAGCTGTC+TGG | - | chr1.1:7043595-7043614 | None:intergenic | 60.0% |
!! | GGTGTCGGCGTGTCAGTGTC+CGG | + | chr1.1:7041835-7041854 | MS.gene33084:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.1 | gene | 7040934 | 7046130 | 7040934 | ID=MS.gene33084 |
chr1.1 | mRNA | 7040934 | 7046130 | 7040934 | ID=MS.gene33084.t1;Parent=MS.gene33084 |
chr1.1 | exon | 7040934 | 7041668 | 7040934 | ID=MS.gene33084.t1.exon1;Parent=MS.gene33084.t1 |
chr1.1 | CDS | 7040934 | 7041668 | 7040934 | ID=cds.MS.gene33084.t1;Parent=MS.gene33084.t1 |
chr1.1 | exon | 7042246 | 7042302 | 7042246 | ID=MS.gene33084.t1.exon2;Parent=MS.gene33084.t1 |
chr1.1 | CDS | 7042246 | 7042302 | 7042246 | ID=cds.MS.gene33084.t1;Parent=MS.gene33084.t1 |
chr1.1 | exon | 7042441 | 7042668 | 7042441 | ID=MS.gene33084.t1.exon3;Parent=MS.gene33084.t1 |
chr1.1 | CDS | 7042441 | 7042668 | 7042441 | ID=cds.MS.gene33084.t1;Parent=MS.gene33084.t1 |
chr1.1 | exon | 7042759 | 7042852 | 7042759 | ID=MS.gene33084.t1.exon4;Parent=MS.gene33084.t1 |
chr1.1 | CDS | 7042759 | 7042852 | 7042759 | ID=cds.MS.gene33084.t1;Parent=MS.gene33084.t1 |
chr1.1 | exon | 7042957 | 7043163 | 7042957 | ID=MS.gene33084.t1.exon5;Parent=MS.gene33084.t1 |
chr1.1 | CDS | 7042957 | 7043163 | 7042957 | ID=cds.MS.gene33084.t1;Parent=MS.gene33084.t1 |
chr1.1 | exon | 7043534 | 7043664 | 7043534 | ID=MS.gene33084.t1.exon6;Parent=MS.gene33084.t1 |
chr1.1 | CDS | 7043534 | 7043664 | 7043534 | ID=cds.MS.gene33084.t1;Parent=MS.gene33084.t1 |
chr1.1 | exon | 7043749 | 7043798 | 7043749 | ID=MS.gene33084.t1.exon7;Parent=MS.gene33084.t1 |
chr1.1 | CDS | 7043749 | 7043798 | 7043749 | ID=cds.MS.gene33084.t1;Parent=MS.gene33084.t1 |
chr1.1 | exon | 7043923 | 7044290 | 7043923 | ID=MS.gene33084.t1.exon8;Parent=MS.gene33084.t1 |
chr1.1 | CDS | 7043923 | 7044290 | 7043923 | ID=cds.MS.gene33084.t1;Parent=MS.gene33084.t1 |
chr1.1 | exon | 7044422 | 7044525 | 7044422 | ID=MS.gene33084.t1.exon9;Parent=MS.gene33084.t1 |
chr1.1 | CDS | 7044422 | 7044525 | 7044422 | ID=cds.MS.gene33084.t1;Parent=MS.gene33084.t1 |
chr1.1 | exon | 7044746 | 7045519 | 7044746 | ID=MS.gene33084.t1.exon10;Parent=MS.gene33084.t1 |
chr1.1 | CDS | 7044746 | 7045519 | 7044746 | ID=cds.MS.gene33084.t1;Parent=MS.gene33084.t1 |
chr1.1 | exon | 7045625 | 7045789 | 7045625 | ID=MS.gene33084.t1.exon11;Parent=MS.gene33084.t1 |
chr1.1 | CDS | 7045625 | 7045789 | 7045625 | ID=cds.MS.gene33084.t1;Parent=MS.gene33084.t1 |
chr1.1 | exon | 7046008 | 7046130 | 7046008 | ID=MS.gene33084.t1.exon12;Parent=MS.gene33084.t1 |
chr1.1 | CDS | 7046008 | 7046130 | 7046008 | ID=cds.MS.gene33084.t1;Parent=MS.gene33084.t1 |
Gene Sequence |
Protein sequence |