Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34751.t1 | XP_013445797.1 | 93.6 | 915 | 56 | 3 | 1 | 914 | 1 | 913 | 0.00E+00 | 1756.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34751.t1 | Q94A41 | 66.1 | 846 | 257 | 9 | 69 | 910 | 66 | 885 | 0.0e+00 | 1169.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34751.t1 | A0A072TSJ2 | 93.6 | 915 | 56 | 3 | 1 | 914 | 1 | 913 | 0.0e+00 | 1756.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene34751 | 0.835793 | 1.36E-56 | -1.69E-46 |
| MS.gene050444 | MS.gene34751 | 0.804384 | 2.22E-49 | -1.69E-46 |
| MS.gene050538 | MS.gene34751 | 0.805917 | 1.06E-49 | -1.69E-46 |
| MS.gene050710 | MS.gene34751 | -0.820603 | 6.28E-53 | -1.69E-46 |
| MS.gene05081 | MS.gene34751 | 0.8625 | 4.85E-64 | -1.69E-46 |
| MS.gene051552 | MS.gene34751 | -0.811855 | 5.68E-51 | -1.69E-46 |
| MS.gene051666 | MS.gene34751 | 0.804249 | 2.37E-49 | -1.69E-46 |
| MS.gene051838 | MS.gene34751 | 0.875278 | 3.49E-68 | -1.69E-46 |
| MS.gene052134 | MS.gene34751 | 0.80548 | 1.31E-49 | -1.69E-46 |
| MS.gene052414 | MS.gene34751 | 0.820248 | 7.58E-53 | -1.69E-46 |
| MS.gene052501 | MS.gene34751 | 0.825255 | 5.18E-54 | -1.69E-46 |
| MS.gene052503 | MS.gene34751 | 0.822589 | 2.18E-53 | -1.69E-46 |
| MS.gene052505 | MS.gene34751 | 0.819992 | 8.68E-53 | -1.69E-46 |
| MS.gene052823 | MS.gene34751 | 0.814619 | 1.40E-51 | -1.69E-46 |
| MS.gene052825 | MS.gene34751 | 0.821076 | 4.89E-53 | -1.69E-46 |
| MS.gene053330 | MS.gene34751 | 0.808753 | 2.65E-50 | -1.69E-46 |
| MS.gene053480 | MS.gene34751 | 0.837831 | 4.12E-57 | -1.69E-46 |
| MS.gene053632 | MS.gene34751 | 0.8242 | 9.18E-54 | -1.69E-46 |
| MS.gene054102 | MS.gene34751 | 0.819832 | 9.44E-53 | -1.69E-46 |
| MS.gene054110 | MS.gene34751 | 0.816396 | 5.65E-52 | -1.69E-46 |
| MS.gene054344 | MS.gene34751 | 0.815733 | 7.95E-52 | -1.69E-46 |
| MS.gene054719 | MS.gene34751 | 0.800653 | 1.30E-48 | -1.69E-46 |
| MS.gene054884 | MS.gene34751 | -0.81208 | 5.07E-51 | -1.69E-46 |
| MS.gene055206 | MS.gene34751 | 0.823558 | 1.30E-53 | -1.69E-46 |
| MS.gene055370 | MS.gene34751 | 0.849402 | 3.31E-60 | -1.69E-46 |
| MS.gene055539 | MS.gene34751 | 0.842933 | 1.91E-58 | -1.69E-46 |
| MS.gene056633 | MS.gene34751 | 0.829986 | 3.79E-55 | -1.69E-46 |
| MS.gene056664 | MS.gene34751 | 0.808098 | 3.66E-50 | -1.69E-46 |
| MS.gene057048 | MS.gene34751 | 0.816848 | 4.48E-52 | -1.69E-46 |
| MS.gene057196 | MS.gene34751 | 0.803479 | 3.42E-49 | -1.69E-46 |
| MS.gene057332 | MS.gene34751 | 0.828728 | 7.65E-55 | -1.69E-46 |
| MS.gene057658 | MS.gene34751 | 0.840957 | 6.36E-58 | -1.69E-46 |
| MS.gene057749 | MS.gene34751 | 0.805477 | 1.31E-49 | -1.69E-46 |
| MS.gene057823 | MS.gene34751 | 0.811614 | 6.41E-51 | -1.69E-46 |
| MS.gene058376 | MS.gene34751 | 0.810981 | 8.79E-51 | -1.69E-46 |
| MS.gene058418 | MS.gene34751 | -0.804813 | 1.80E-49 | -1.69E-46 |
| MS.gene058444 | MS.gene34751 | 0.812786 | 3.56E-51 | -1.69E-46 |
| MS.gene058838 | MS.gene34751 | 0.843757 | 1.15E-58 | -1.69E-46 |
| MS.gene059023 | MS.gene34751 | 0.810047 | 1.40E-50 | -1.69E-46 |
| MS.gene05914 | MS.gene34751 | 0.813846 | 2.08E-51 | -1.69E-46 |
| MS.gene05926 | MS.gene34751 | -0.806853 | 6.72E-50 | -1.69E-46 |
| MS.gene059455 | MS.gene34751 | 0.807573 | 4.73E-50 | -1.69E-46 |
| MS.gene059512 | MS.gene34751 | 0.833316 | 5.72E-56 | -1.69E-46 |
| MS.gene059717 | MS.gene34751 | 0.805536 | 1.27E-49 | -1.69E-46 |
| MS.gene060835 | MS.gene34751 | 0.808394 | 3.16E-50 | -1.69E-46 |
| MS.gene061231 | MS.gene34751 | 0.803234 | 3.84E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34751.t1 | MTR_8g468990 | 95.738 | 915 | 36 | 3 | 1 | 914 | 1 | 913 | 0.0 | 1774 |
| MS.gene34751.t1 | MTR_8g468990 | 95.652 | 805 | 32 | 3 | 1 | 804 | 1 | 803 | 0.0 | 1550 |
| MS.gene34751.t1 | MTR_8g468990 | 96.078 | 765 | 29 | 1 | 150 | 914 | 1 | 764 | 0.0 | 1509 |
| MS.gene34751.t1 | MTR_7g013300 | 61.000 | 400 | 149 | 5 | 515 | 909 | 562 | 959 | 2.88e-176 | 536 |
| MS.gene34751.t1 | MTR_1g026170 | 48.485 | 396 | 193 | 6 | 519 | 910 | 43 | 431 | 3.85e-132 | 404 |
| MS.gene34751.t1 | MTR_1g019440 | 48.259 | 402 | 190 | 8 | 522 | 910 | 25 | 421 | 1.92e-124 | 383 |
| MS.gene34751.t1 | MTR_1g019480 | 40.887 | 406 | 197 | 12 | 522 | 912 | 25 | 402 | 1.58e-90 | 293 |
| MS.gene34751.t1 | MTR_3g062030 | 41.250 | 160 | 67 | 5 | 634 | 791 | 90 | 224 | 4.08e-30 | 119 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34751.t1 | AT1G69830 | 67.141 | 843 | 253 | 8 | 69 | 910 | 66 | 885 | 0.0 | 1176 |
| MS.gene34751.t1 | AT1G76130 | 48.990 | 396 | 191 | 6 | 519 | 910 | 24 | 412 | 6.22e-132 | 402 |
| MS.gene34751.t1 | AT1G76130 | 48.990 | 396 | 191 | 6 | 519 | 910 | 24 | 412 | 6.22e-132 | 402 |
| MS.gene34751.t1 | AT4G25000 | 45.614 | 399 | 203 | 8 | 522 | 910 | 27 | 421 | 5.94e-110 | 345 |
Find 224 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCTTCATTGGGGAGTTTC+TGG | 0.091608 | 8.3:+41281193 | MS.gene34751:CDS |
| GTAGCAAAAGTTTCAAATTT+TGG | 0.135634 | 8.3:-41280362 | None:intergenic |
| AAACTATTGTCTACCTTTAT+AGG | 0.158801 | 8.3:-41281596 | None:intergenic |
| CTCTTGGCTTTACTGTTATT+TGG | 0.163991 | 8.3:+41283964 | MS.gene34751:CDS |
| AAGGAGGATGCTAATTTAAT+TGG | 0.164978 | 8.3:+41282004 | MS.gene34751:CDS |
| TTGACTTTGTCAGAGGATTT+TGG | 0.181955 | 8.3:+41286216 | MS.gene34751:CDS |
| AATGGTTTCTTGAGCTTCTT+TGG | 0.188878 | 8.3:-41283694 | None:intergenic |
| AATGGTATTTGGAACATATT+TGG | 0.190723 | 8.3:+41284585 | MS.gene34751:CDS |
| TCCAAATACCATTCTTATTC+TGG | 0.193836 | 8.3:-41284575 | None:intergenic |
| TAGTATGCCAAGGGTTTAAT+TGG | 0.203351 | 8.3:+41283880 | MS.gene34751:CDS |
| GAAATAAGGCATTTGGTTAC+TGG | 0.216838 | 8.3:+41283639 | MS.gene34751:CDS |
| GAGAGAGAGTGTGAAGAATT+TGG | 0.220547 | 8.3:-41280266 | None:intergenic |
| TTAACTATGGTTCTTGTTCT+TGG | 0.227656 | 8.3:+41280306 | MS.gene34751:CDS |
| CATCGGTTGCTTCTGAATTC+AGG | 0.242070 | 8.3:-41282656 | None:intergenic |
| CTTCCCTTTCCACTTCCTTT+TGG | 0.255177 | 8.3:-41283393 | None:intergenic |
| ATTTATATAATTTAAATTCT+AGG | 0.265509 | 8.3:+41284036 | MS.gene34751:CDS |
| ACAGTAACTTCCTTGGTTAA+AGG | 0.278492 | 8.3:-41282759 | None:intergenic |
| ATAAACGTCCCTTTCTGATT+TGG | 0.282607 | 8.3:-41288027 | None:intergenic |
| TATTTCATTGATTATTTCAT+TGG | 0.290467 | 8.3:-41283622 | None:intergenic |
| GATGCAATCTACCAGGAAAT+TGG | 0.294770 | 8.3:+41281170 | MS.gene34751:CDS |
| ATGAAATAATCAATGAAATA+AGG | 0.296161 | 8.3:+41283625 | MS.gene34751:CDS |
| TGTGGAATCCGAGGTTGTTT+TGG | 0.299314 | 8.3:+41283797 | MS.gene34751:CDS |
| AAGAACACTGACGGAGTTCC+TGG | 0.299428 | 8.3:-41287123 | None:intergenic |
| ACTTCCGGTAGCTCAGTTAT+TGG | 0.310168 | 8.3:+41283528 | MS.gene34751:CDS |
| ATTTGGCTTGAAACGGTTAA+TGG | 0.313857 | 8.3:-41280249 | None:intergenic |
| TTAAGATAAATGAAAATTCA+TGG | 0.318297 | 8.3:+41283466 | MS.gene34751:CDS |
| CAGGAAATTGGATTCTTCAT+TGG | 0.318347 | 8.3:+41281182 | MS.gene34751:CDS |
| ACGGAAGAGACTACAAGATT+TGG | 0.334541 | 8.3:+41288141 | MS.gene34751:CDS |
| AGGAAATTGGATTCTTCATT+GGG | 0.341748 | 8.3:+41281183 | MS.gene34751:CDS |
| TATTTGGAGGTCGTCTCAAC+TGG | 0.344947 | 8.3:+41284601 | MS.gene34751:CDS |
| TACGTCCCTCTCTCAACTTC+CGG | 0.350003 | 8.3:+41283513 | MS.gene34751:CDS |
| AGTTTGGCGAACTCAATTAA+AGG | 0.353674 | 8.3:+41282962 | MS.gene34751:CDS |
| GTGAAAGAATTTCATAAAGT+TGG | 0.354126 | 8.3:+41284504 | MS.gene34751:CDS |
| AGGGAATGATTTGAAGAATT+CGG | 0.355616 | 8.3:+41281135 | MS.gene34751:CDS |
| ACTTCCAATACTATTAACTA+TGG | 0.356115 | 8.3:+41280293 | MS.gene34751:CDS |
| AGAGAAGAAATTGGATATGA+TGG | 0.358210 | 8.3:+41286185 | MS.gene34751:intron |
| AAGTTCAGCACAAATCTCTT+TGG | 0.358310 | 8.3:+41283413 | MS.gene34751:CDS |
| GTTTCTGGTGTGGATGATAT+TGG | 0.363105 | 8.3:+41281208 | MS.gene34751:CDS |
| ACCAGAATAAGAATGGTATT+TGG | 0.363914 | 8.3:+41284574 | MS.gene34751:CDS |
| AATCAATGAAATAAGGCATT+TGG | 0.365401 | 8.3:+41283632 | MS.gene34751:CDS |
| AATTGGGAGTCTAATAAATC+TGG | 0.367354 | 8.3:+41283897 | MS.gene34751:CDS |
| AAGAATGGTTATGCTGGTTA+AGG | 0.367519 | 8.3:+41285245 | MS.gene34751:CDS |
| TCCTGGATCTATTCCTATAA+AGG | 0.369975 | 8.3:+41281583 | MS.gene34751:CDS |
| ATCCCTTGGCATGTATCCTT+CGG | 0.372788 | 8.3:-41284015 | None:intergenic |
| TACTCTCCCACGCAAAAGTA+TGG | 0.374781 | 8.3:-41286275 | None:intergenic |
| TACCAGTTCAATTCTGTTGA+TGG | 0.381799 | 8.3:-41280447 | None:intergenic |
| AATTTAATTGGACCTAAAAC+AGG | 0.381891 | 8.3:+41282016 | MS.gene34751:CDS |
| TCTCTATTCGGAAACGGAAC+GGG | 0.392449 | 8.3:+41287190 | MS.gene34751:CDS |
| TAGAGATGATTTAAGAAGTT+GGG | 0.393078 | 8.3:+41282890 | MS.gene34751:CDS |
| TCCTCTGGTAAACTATCTTA+AGG | 0.405222 | 8.3:+41281985 | MS.gene34751:CDS |
| AGTTCAGCACAAATCTCTTT+GGG | 0.405517 | 8.3:+41283414 | MS.gene34751:CDS |
| CAGTTATACATATGGTGAAA+TGG | 0.406347 | 8.3:+41286310 | MS.gene34751:CDS |
| AAGAATTCGGAGCTTATAGT+TGG | 0.409365 | 8.3:+41281148 | MS.gene34751:CDS |
| ATCATGTCGGGAACAGGCAC+AGG | 0.411759 | 8.3:+41283849 | MS.gene34751:CDS |
| TCCCTTGGCATGTATCCTTC+GGG | 0.412074 | 8.3:-41284014 | None:intergenic |
| CGGAAGAGACTACAAGATTT+GGG | 0.413097 | 8.3:+41288142 | MS.gene34751:CDS |
| TAGCGGCACTTCTCTCTATT+CGG | 0.421298 | 8.3:+41287178 | MS.gene34751:CDS |
| TGGAGGCAACTCAGGTGATT+CGG | 0.422854 | 8.3:-41283823 | None:intergenic |
| TTGGCGCTTGTCGGATCAGC+AGG | 0.425045 | 8.3:+41286588 | MS.gene34751:CDS |
| TCTTTATATGCCACAGTTTG+TGG | 0.425417 | 8.3:-41282936 | None:intergenic |
| TCTTTCAATTTCTTGAAGAA+TGG | 0.430927 | 8.3:-41283712 | None:intergenic |
| GTAGAGATGATTTAAGAAGT+TGG | 0.433427 | 8.3:+41282889 | MS.gene34751:CDS |
| TGAGGTTCTAAAGATACTAT+AGG | 0.434562 | 8.3:-41283748 | None:intergenic |
| TCCTGTGAATGATCAATGTT+TGG | 0.444598 | 8.3:-41285202 | None:intergenic |
| CAATGAAGAATCCAATTTCC+TGG | 0.444655 | 8.3:-41281181 | None:intergenic |
| TCATAAAGAGTATCTCCTTC+CGG | 0.451981 | 8.3:-41281741 | None:intergenic |
| TCGATGCAGGACGAGGAAAC+TGG | 0.453145 | 8.3:+41281926 | MS.gene34751:intron |
| CTCTCTATTCGGAAACGGAA+CGG | 0.458500 | 8.3:+41287189 | MS.gene34751:CDS |
| TAGACTCCCAATTAAACCCT+TGG | 0.463111 | 8.3:-41283887 | None:intergenic |
| TCCCACGCAAAAGTATGGTT+TGG | 0.464670 | 8.3:-41286270 | None:intergenic |
| TCCCATCAACAGAATTGAAC+TGG | 0.465937 | 8.3:+41280445 | MS.gene34751:CDS |
| TGAGAAACGATATTAAAGAA+TGG | 0.466017 | 8.3:+41285230 | MS.gene34751:CDS |
| CACAGAGTGAAGAATCCCTT+TGG | 0.466936 | 8.3:-41286417 | None:intergenic |
| TGGCATATAAAGACACAGTT+TGG | 0.469522 | 8.3:+41282946 | MS.gene34751:CDS |
| AGAACCATAGTTAATAGTAT+TGG | 0.469641 | 8.3:-41280297 | None:intergenic |
| GAGATACTCTTTATGAAGTC+AGG | 0.472117 | 8.3:+41281748 | MS.gene34751:CDS |
| ACCATTCTTATTCTGGTGCT+CGG | 0.473658 | 8.3:-41284568 | None:intergenic |
| TTTAAATTATATAAATCCCT+TGG | 0.473963 | 8.3:-41284029 | None:intergenic |
| GTGAAGAATTTGGCTTGAAA+CGG | 0.474351 | 8.3:-41280256 | None:intergenic |
| GTTATTGACAGTAACTTCCT+TGG | 0.481501 | 8.3:-41282766 | None:intergenic |
| GATTCCCTCAGTTATACATA+TGG | 0.481642 | 8.3:+41286302 | MS.gene34751:CDS |
| AAGAGACTTCAAAGTTCCTC+TGG | 0.481998 | 8.3:+41281970 | MS.gene34751:CDS |
| AAGAAATTGGATATGATGGA+TGG | 0.482079 | 8.3:+41286189 | MS.gene34751:CDS |
| AGTATGCCAAGGGTTTAATT+GGG | 0.484401 | 8.3:+41283881 | MS.gene34751:CDS |
| CCCCGTGATATGATACCTCC+TGG | 0.484490 | 8.3:+41281566 | MS.gene34751:CDS |
| AATCGCTGAAATCTCATCGC+TGG | 0.484867 | 8.3:-41281784 | None:intergenic |
| TCTTCAAGAAATTGAAAGAC+TGG | 0.486638 | 8.3:+41283716 | MS.gene34751:CDS |
| CAGAAGATTGAATCTGTTGA+AGG | 0.487387 | 8.3:-41280397 | None:intergenic |
| ACCAGTTCAATTCTGTTGAT+GGG | 0.490268 | 8.3:-41280446 | None:intergenic |
| ACTCTATCAGTGTTTCCGTT+AGG | 0.491636 | 8.3:+41282787 | MS.gene34751:CDS |
| ATGTGAGTATTGGCGCTTGT+CGG | 0.492772 | 8.3:+41286579 | MS.gene34751:CDS |
| GCTAAAGAACTAGCATCTCT+TGG | 0.494064 | 8.3:+41283948 | MS.gene34751:CDS |
| CTCTACAAACTCCCCAATGA+AGG | 0.495764 | 8.3:-41282872 | None:intergenic |
| AGACTACAAGATTTGGGAGC+TGG | 0.499681 | 8.3:+41288148 | MS.gene34751:CDS |
| CACTTCTCTCTATTCGGAAA+CGG | 0.499973 | 8.3:+41287184 | MS.gene34751:CDS |
| TCAAGATAGCAACAGTGAAT+CGG | 0.500297 | 8.3:+41282686 | MS.gene34751:CDS |
| TAAAATTACCAAATCAGAAA+GGG | 0.504939 | 8.3:+41288019 | MS.gene34751:CDS |
| CCTCACTCATAGGGAACATA+GGG | 0.506379 | 8.3:+41282616 | MS.gene34751:intron |
| CTCGGAGAAAGCTGGAACTG+AGG | 0.506669 | 8.3:-41283766 | None:intergenic |
| TCCTCACTCATAGGGAACAT+AGG | 0.510395 | 8.3:+41282615 | MS.gene34751:intron |
| GTGTTTATAAGATTAGATCA+AGG | 0.510606 | 8.3:+41281115 | MS.gene34751:CDS |
| CGATCTGTTATGTAGCCAAA+AGG | 0.511112 | 8.3:+41283378 | MS.gene34751:intron |
| CATTTGATGTTACAACCAAA+GGG | 0.513448 | 8.3:+41286402 | MS.gene34751:CDS |
| ATAGCTTCCTCGGAGAAAGC+TGG | 0.514012 | 8.3:-41283774 | None:intergenic |
| TCCAGGAGGTATCATATCAC+GGG | 0.519553 | 8.3:-41281567 | None:intergenic |
| GCATTTGATGTTACAACCAA+AGG | 0.521112 | 8.3:+41286401 | MS.gene34751:CDS |
| TAGCCAAAAGGAAGTGGAAA+GGG | 0.521578 | 8.3:+41283390 | MS.gene34751:intron |
| GGTAGTGAGATAGTTTGAAA+TGG | 0.522379 | 8.3:-41280214 | None:intergenic |
| CATTGGAAAGATGTGAGTAT+TGG | 0.524075 | 8.3:+41286569 | MS.gene34751:CDS |
| GATGATGATGATTTCTTCAA+AGG | 0.524610 | 8.3:-41281717 | None:intergenic |
| ATCAAGATGCACACAGGCAG+AGG | 0.525851 | 8.3:+41286339 | MS.gene34751:CDS |
| ATTTCTTCTATACAGGGGAG+GGG | 0.526902 | 8.3:+41285145 | MS.gene34751:intron |
| GTTATGTAGCCAAAAGGAAG+TGG | 0.527882 | 8.3:+41283384 | MS.gene34751:intron |
| ATAGTTAATAGTATTGGAAG+TGG | 0.528099 | 8.3:-41280291 | None:intergenic |
| TAATCTGCAGGTGGAGGGAA+AGG | 0.530804 | 8.3:+41281093 | MS.gene34751:intron |
| ACAGGCAGAGGATCGTTGAC+TGG | 0.534572 | 8.3:+41286351 | MS.gene34751:CDS |
| GGTATTTGGAACATATTTGG+AGG | 0.534787 | 8.3:+41284588 | MS.gene34751:CDS |
| CACATCCTTCAGTTCATCAA+TGG | 0.535296 | 8.3:-41284481 | None:intergenic |
| ATATTAAAGAATGGTTATGC+TGG | 0.535991 | 8.3:+41285239 | MS.gene34751:CDS |
| GCTATCTTGAACTTTGTCAT+CGG | 0.536017 | 8.3:-41282673 | None:intergenic |
| GTTTGTGGTGGATGAGGAGC+AGG | 0.537323 | 8.3:-41282921 | None:intergenic |
| GGATTCCACAATAGCTTCCT+CGG | 0.538172 | 8.3:-41283784 | None:intergenic |
| TTAAAATTACCAAATCAGAA+AGG | 0.543716 | 8.3:+41288018 | MS.gene34751:CDS |
| TTTCTCCGAGGAAGCTATTG+TGG | 0.544731 | 8.3:+41283779 | MS.gene34751:CDS |
| AAAGTTGGAATCAAAGTGCT+AGG | 0.546749 | 8.3:+41284519 | MS.gene34751:CDS |
| AGTCTAATAAATCTGGAAGA+TGG | 0.547837 | 8.3:+41283904 | MS.gene34751:CDS |
| AGTGCTGCCGGTGGTACTGC+AGG | 0.548738 | 8.3:+41286377 | MS.gene34751:CDS |
| TTATATGCCACAGTTTGTGG+TGG | 0.549673 | 8.3:-41282933 | None:intergenic |
| ATCGCTGAAATCTCATCGCT+GGG | 0.549931 | 8.3:-41281783 | None:intergenic |
| GGCCACCATCCCATAACACC+GGG | 0.551856 | 8.3:-41286619 | None:intergenic |
| GCCACAGTTTGTGGTGGATG+AGG | 0.553373 | 8.3:-41282927 | None:intergenic |
| TCCAAACATTGATCATTCAC+AGG | 0.559398 | 8.3:+41285201 | MS.gene34751:CDS |
| TAAATCTGGAAGATGGTACA+TGG | 0.559670 | 8.3:+41283911 | MS.gene34751:CDS |
| AAATTCATGGTTAAATAACA+AGG | 0.562174 | 8.3:+41283479 | MS.gene34751:CDS |
| TGTTTATAAGATTAGATCAA+GGG | 0.564271 | 8.3:+41281116 | MS.gene34751:CDS |
| ATCCAGGAGGTATCATATCA+CGG | 0.565082 | 8.3:-41281568 | None:intergenic |
| ACCTTTATAGGAATAGATCC+AGG | 0.566563 | 8.3:-41281584 | None:intergenic |
| GAAGAAATCATCATCATCAC+CGG | 0.568649 | 8.3:+41281722 | MS.gene34751:CDS |
| GTTGCCAATAACTGAGCTAC+CGG | 0.569553 | 8.3:-41283532 | None:intergenic |
| TGTAGAACTGCCTTTAACCA+AGG | 0.570430 | 8.3:+41282749 | MS.gene34751:CDS |
| GCCGAGCACCAGAATAAGAA+TGG | 0.571880 | 8.3:+41284567 | MS.gene34751:CDS |
| ACTCTTTATGAAGTCAGGAT+CGG | 0.574850 | 8.3:+41281753 | MS.gene34751:CDS |
| AGAACACTGACGGAGTTCCT+GGG | 0.576561 | 8.3:-41287122 | None:intergenic |
| CAATGAAGGAAAATATCACC+TGG | 0.578377 | 8.3:-41282858 | None:intergenic |
| GTTGCTATGAAGATCGGTCC+TGG | 0.578469 | 8.3:+41288071 | MS.gene34751:CDS |
| TTTATAGAAAACCACGACAC+TGG | 0.578589 | 8.3:+41286658 | MS.gene34751:CDS |
| AAATGCACCTGCAGTACCAC+CGG | 0.579580 | 8.3:-41286384 | None:intergenic |
| GGGTATGAAATAGTATGCCA+AGG | 0.581724 | 8.3:+41283870 | MS.gene34751:CDS |
| TGGTTATGTAAAGGACTACA+TGG | 0.581785 | 8.3:+41286241 | MS.gene34751:CDS |
| TGGAGGCTTGACTTTGTCAG+AGG | 0.583959 | 8.3:+41286209 | MS.gene34751:CDS |
| GAGTGAAGAGGCAGGCGAAG+AGG | 0.586230 | 8.3:+41283581 | MS.gene34751:CDS |
| GAAAGTTGTAAAGAGTGAAG+AGG | 0.588257 | 8.3:+41283569 | MS.gene34751:CDS |
| GTTGTAAAGAGTGAAGAGGC+AGG | 0.590094 | 8.3:+41283573 | MS.gene34751:CDS |
| TGTTTCTGAGCATTTCCTAA+CGG | 0.590931 | 8.3:-41282802 | None:intergenic |
| ACAGGCTTTAGTTTGTCCCA+AGG | 0.592504 | 8.3:+41282034 | MS.gene34751:CDS |
| CGGCCACCATCCCATAACAC+CGG | 0.593039 | 8.3:-41286620 | None:intergenic |
| CACCCGAAGGATACATGCCA+AGG | 0.593755 | 8.3:+41284012 | MS.gene34751:CDS |
| GTAGCCAAAAGGAAGTGGAA+AGG | 0.595926 | 8.3:+41283389 | MS.gene34751:intron |
| AAATGTAATCTGCAGGTGGA+GGG | 0.600153 | 8.3:+41281088 | MS.gene34751:intron |
| GATTTAGAAACGGATATACC+AGG | 0.600340 | 8.3:+41282840 | MS.gene34751:CDS |
| GATAGTTTGAAATGGAAGAG+TGG | 0.602677 | 8.3:-41280206 | None:intergenic |
| ACTCATAGGGAACATAGGGC+AGG | 0.605549 | 8.3:+41282620 | MS.gene34751:intron |
| CCACCATCCCATAACACCGG+GGG | 0.607637 | 8.3:-41286617 | None:intergenic |
| GATCAATGTTTGGAGCCGCA+TGG | 0.607937 | 8.3:-41285192 | None:intergenic |
| AAGGAAAATAGTCAAGCAGA+AGG | 0.609635 | 8.3:+41282720 | MS.gene34751:CDS |
| GGAGAGAGAAACTTATGGGG+TGG | 0.609688 | 8.3:-41280341 | None:intergenic |
| GTTGACTGGATTAGTGCTGC+CGG | 0.609834 | 8.3:+41286365 | MS.gene34751:CDS |
| CTACAAGATTTGGGAGCTGG+AGG | 0.611194 | 8.3:+41288151 | MS.gene34751:CDS |
| GGGAGGGGCAACAAGAGTAG+TGG | 0.612121 | 8.3:+41285160 | MS.gene34751:CDS |
| ATTTGGAGGTCGTCTCAACT+GGG | 0.613014 | 8.3:+41284602 | MS.gene34751:CDS |
| ATAGTTGGATGCAATCTACC+AGG | 0.613023 | 8.3:+41281163 | MS.gene34751:CDS |
| GAAACAGAGTCTGTAGGTGG+CGG | 0.614812 | 8.3:-41283990 | None:intergenic |
| AAATTGGATATGATGGATGG+AGG | 0.615727 | 8.3:+41286192 | MS.gene34751:CDS |
| CTAGGTGGTTCATAATGACC+AGG | 0.616324 | 8.3:-41288089 | None:intergenic |
| AGAAGATTGAATCTGTTGAA+GGG | 0.618052 | 8.3:-41280396 | None:intergenic |
| TCCTCATCCACCACAAACTG+TGG | 0.618919 | 8.3:+41282926 | MS.gene34751:CDS |
| ATCATAATCAAGATGCACAC+AGG | 0.619941 | 8.3:+41286333 | MS.gene34751:CDS |
| AGGACGAGGAAACTGGCACT+TGG | 0.620719 | 8.3:+41281933 | MS.gene34751:intron |
| TTCGGATTCCAAAACAACCT+CGG | 0.621124 | 8.3:-41283805 | None:intergenic |
| AGCTACCGGAAGTTGAGAGA+GGG | 0.621352 | 8.3:-41283518 | None:intergenic |
| CCACGACACTGGTTCTACAC+AGG | 0.621703 | 8.3:+41286669 | MS.gene34751:CDS |
| ATAAAAGTAACGGCACGAGA+CGG | 0.624117 | 8.3:-41286640 | None:intergenic |
| TCCTTAAGATAGTTTACCAG+AGG | 0.626240 | 8.3:-41281986 | None:intergenic |
| TGGTACCATTGATGAACTGA+AGG | 0.629503 | 8.3:+41284476 | MS.gene34751:CDS |
| TCATTGGGGAGTTTCTGGTG+TGG | 0.629899 | 8.3:+41281198 | MS.gene34751:CDS |
| AATTCATGGTTAAATAACAA+GGG | 0.635549 | 8.3:+41283480 | MS.gene34751:CDS |
| TTCACCATATGTATAACTGA+GGG | 0.635616 | 8.3:-41286306 | None:intergenic |
| AAATGGAAATCAGCTTGGGA+CGG | 0.636057 | 8.3:+41288122 | MS.gene34751:CDS |
| TGGTTCAGAGAAAACAGTGG+TGG | 0.636081 | 8.3:-41280186 | None:intergenic |
| ACAGACTCTGTTTCACCCGA+AGG | 0.638131 | 8.3:+41283999 | MS.gene34751:CDS |
| TCGGGTGAAACAGAGTCTGT+AGG | 0.639431 | 8.3:-41283996 | None:intergenic |
| AAAGATACTATAGGCTTCAG+CGG | 0.639584 | 8.3:-41283739 | None:intergenic |
| CATTGATGAACTGAAGGATG+TGG | 0.641184 | 8.3:+41284482 | MS.gene34751:CDS |
| TTTCACCATATGTATAACTG+AGG | 0.642730 | 8.3:-41286307 | None:intergenic |
| AAATCATCATCATCACCGGA+AGG | 0.643044 | 8.3:+41281726 | MS.gene34751:CDS |
| GAGCTACCGGAAGTTGAGAG+AGG | 0.643646 | 8.3:-41283519 | None:intergenic |
| ACCCGAAGGATACATGCCAA+GGG | 0.644490 | 8.3:+41284013 | MS.gene34751:CDS |
| TGTGGTGGATGAGGAGCAGG+TGG | 0.645049 | 8.3:-41282918 | None:intergenic |
| ATGTGGTCAAAGAACACTGA+CGG | 0.646715 | 8.3:-41287132 | None:intergenic |
| TTTGGAGAGAGAAACTTATG+GGG | 0.652371 | 8.3:-41280344 | None:intergenic |
| GGTTAATGGTAGCTAATCTG+TGG | 0.652438 | 8.3:-41280235 | None:intergenic |
| CCCCACGGAAAAGAAATGCA+AGG | 0.652968 | 8.3:+41287078 | MS.gene34751:CDS |
| CTCAGTTCCAGCTTTCTCCG+AGG | 0.653474 | 8.3:+41283767 | MS.gene34751:CDS |
| GGTATGAAATAGTATGCCAA+GGG | 0.653817 | 8.3:+41283871 | MS.gene34751:CDS |
| TCTGGTAAACTATCTTAAGG+AGG | 0.654888 | 8.3:+41281988 | MS.gene34751:CDS |
| GGAAGCTATTGTGGAATCCG+AGG | 0.655431 | 8.3:+41283788 | MS.gene34751:CDS |
| CTGGTGTGGATGATATTGGA+AGG | 0.663725 | 8.3:+41281212 | MS.gene34751:CDS |
| GGAAATTGGATTCTTCATTG+GGG | 0.663839 | 8.3:+41281184 | MS.gene34751:CDS |
| CTCAGTTATTGGCAACAGAG+AGG | 0.668523 | 8.3:+41283539 | MS.gene34751:CDS |
| CCTGTGTAGAACCAGTGTCG+TGG | 0.669185 | 8.3:-41286669 | None:intergenic |
| GCTTATACTCTTACTCACCC+AGG | 0.670081 | 8.3:+41287105 | MS.gene34751:CDS |
| TCATGTCGGGAACAGGCACA+GGG | 0.672922 | 8.3:+41283850 | MS.gene34751:CDS |
| GGTGAAACAGAGTCTGTAGG+TGG | 0.678034 | 8.3:-41283993 | None:intergenic |
| CCAGGAGGTATCATATCACG+GGG | 0.685523 | 8.3:-41281566 | None:intergenic |
| GGCACTTGGTATCAACACAA+AGG | 0.687243 | 8.3:+41281947 | MS.gene34751:CDS |
| GACTGGATTAGTGCTGCCGG+TGG | 0.691174 | 8.3:+41286368 | MS.gene34751:CDS |
| TGGCGCTTGTCGGATCAGCA+GGG | 0.692297 | 8.3:+41286589 | MS.gene34751:CDS |
| GCCACCATCCCATAACACCG+GGG | 0.702449 | 8.3:-41286618 | None:intergenic |
| CACCATCCCATAACACCGGG+GGG | 0.704813 | 8.3:-41286616 | None:intergenic |
| GGAGGTATCATATCACGGGG+TGG | 0.712340 | 8.3:-41281563 | None:intergenic |
| GGTCATTGGAGATTTCCCCA+CGG | 0.723859 | 8.3:+41287063 | MS.gene34751:CDS |
| TAGTGGAGATAGTTTCCATG+CGG | 0.748696 | 8.3:+41285177 | MS.gene34751:CDS |
| GAGTGGTTCAGAGAAAACAG+TGG | 0.759302 | 8.3:-41280189 | None:intergenic |
| TTTATAGGAATAGATCCAGG+AGG | 0.764420 | 8.3:-41281581 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 41280176 | 41288181 | 41280176 | ID=MS.gene34751 |
| chr8.3 | mRNA | 41280176 | 41288181 | 41280176 | ID=MS.gene34751.t1;Parent=MS.gene34751 |
| chr8.3 | exon | 41280176 | 41280466 | 41280176 | ID=MS.gene34751.t1.exon1;Parent=MS.gene34751.t1 |
| chr8.3 | CDS | 41280176 | 41280466 | 41280176 | ID=cds.MS.gene34751.t1;Parent=MS.gene34751.t1 |
| chr8.3 | exon | 41281103 | 41281233 | 41281103 | ID=MS.gene34751.t1.exon2;Parent=MS.gene34751.t1 |
| chr8.3 | CDS | 41281103 | 41281233 | 41281103 | ID=cds.MS.gene34751.t1;Parent=MS.gene34751.t1 |
| chr8.3 | exon | 41281550 | 41281604 | 41281550 | ID=MS.gene34751.t1.exon3;Parent=MS.gene34751.t1 |
| chr8.3 | CDS | 41281550 | 41281604 | 41281550 | ID=cds.MS.gene34751.t1;Parent=MS.gene34751.t1 |
| chr8.3 | exon | 41281699 | 41281821 | 41281699 | ID=MS.gene34751.t1.exon4;Parent=MS.gene34751.t1 |
| chr8.3 | CDS | 41281699 | 41281821 | 41281699 | ID=cds.MS.gene34751.t1;Parent=MS.gene34751.t1 |
| chr8.3 | exon | 41281935 | 41282055 | 41281935 | ID=MS.gene34751.t1.exon5;Parent=MS.gene34751.t1 |
| chr8.3 | CDS | 41281935 | 41282055 | 41281935 | ID=cds.MS.gene34751.t1;Parent=MS.gene34751.t1 |
| chr8.3 | exon | 41282628 | 41282983 | 41282628 | ID=MS.gene34751.t1.exon6;Parent=MS.gene34751.t1 |
| chr8.3 | CDS | 41282628 | 41282983 | 41282628 | ID=cds.MS.gene34751.t1;Parent=MS.gene34751.t1 |
| chr8.3 | exon | 41283393 | 41284057 | 41283393 | ID=MS.gene34751.t1.exon7;Parent=MS.gene34751.t1 |
| chr8.3 | CDS | 41283393 | 41284057 | 41283393 | ID=cds.MS.gene34751.t1;Parent=MS.gene34751.t1 |
| chr8.3 | exon | 41284473 | 41284662 | 41284473 | ID=MS.gene34751.t1.exon8;Parent=MS.gene34751.t1 |
| chr8.3 | CDS | 41284473 | 41284662 | 41284473 | ID=cds.MS.gene34751.t1;Parent=MS.gene34751.t1 |
| chr8.3 | exon | 41285160 | 41285266 | 41285160 | ID=MS.gene34751.t1.exon9;Parent=MS.gene34751.t1 |
| chr8.3 | CDS | 41285160 | 41285266 | 41285160 | ID=cds.MS.gene34751.t1;Parent=MS.gene34751.t1 |
| chr8.3 | exon | 41286187 | 41286436 | 41286187 | ID=MS.gene34751.t1.exon10;Parent=MS.gene34751.t1 |
| chr8.3 | CDS | 41286187 | 41286436 | 41286187 | ID=cds.MS.gene34751.t1;Parent=MS.gene34751.t1 |
| chr8.3 | exon | 41286568 | 41286690 | 41286568 | ID=MS.gene34751.t1.exon11;Parent=MS.gene34751.t1 |
| chr8.3 | CDS | 41286568 | 41286690 | 41286568 | ID=cds.MS.gene34751.t1;Parent=MS.gene34751.t1 |
| chr8.3 | exon | 41287063 | 41287230 | 41287063 | ID=MS.gene34751.t1.exon12;Parent=MS.gene34751.t1 |
| chr8.3 | CDS | 41287063 | 41287230 | 41287063 | ID=cds.MS.gene34751.t1;Parent=MS.gene34751.t1 |
| chr8.3 | exon | 41288017 | 41288181 | 41288017 | ID=MS.gene34751.t1.exon13;Parent=MS.gene34751.t1 |
| chr8.3 | CDS | 41288017 | 41288181 | 41288017 | ID=cds.MS.gene34751.t1;Parent=MS.gene34751.t1 |
| Gene Sequence |
| Protein sequence |
