AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene35407

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene35407.t1 MTR_2g086420 97.787 497 7 3 1 493 1 497 0.0 998
MS.gene35407.t1 MTR_2g086420 97.586 497 7 4 1 493 1 496 0.0 991
MS.gene35407.t1 MTR_4g053250 66.075 507 140 9 1 493 1 489 0.0 655
MS.gene35407.t1 MTR_8g040120 62.585 294 99 4 182 465 174 466 5.89e-125 372
MS.gene35407.t1 MTR_7g089800 59.934 302 110 3 174 465 123 423 4.09e-123 366
MS.gene35407.t1 MTR_7g089800 59.934 302 110 3 174 465 152 452 8.95e-123 367
MS.gene35407.t1 MTR_7g092750 43.340 473 187 12 21 465 44 463 4.73e-120 360
MS.gene35407.t1 MTR_7g092750 52.923 325 135 3 159 465 38 362 5.23e-119 353
MS.gene35407.t1 MTR_3g087940 54.795 292 120 4 183 465 73 361 4.05e-109 328
MS.gene35407.t1 MTR_5g054900 54.167 288 122 2 188 465 66 353 6.23e-105 317
MS.gene35407.t1 MTR_5g054900 54.167 288 122 2 188 465 147 434 4.72e-104 318
MS.gene35407.t1 MTR_5g054900 53.472 288 120 3 188 465 66 349 3.34e-101 308
MS.gene35407.t1 MTR_7g092750 39.958 473 177 13 21 465 44 437 5.70e-101 310
MS.gene35407.t1 MTR_5g054900 53.472 288 120 3 188 465 177 460 6.32e-100 308
MS.gene35407.t1 MTR_0126s0080 42.857 420 156 8 36 417 85 458 7.85e-99 306
MS.gene35407.t1 MTR_1g111310 47.896 309 146 3 168 465 403 707 8.00e-96 305
MS.gene35407.t1 MTR_1g111310 47.475 297 145 3 168 459 36 326 5.63e-85 276
MS.gene35407.t1 MTR_5g060950 49.518 311 146 4 162 462 37 346 4.81e-93 287
MS.gene35407.t1 MTR_8g091650 51.418 282 125 4 193 465 5 283 2.29e-90 277
MS.gene35407.t1 MTR_8g091650 51.228 285 127 4 190 465 75 356 2.33e-90 280
MS.gene35407.t1 MTR_8g091650 51.228 285 127 4 190 465 111 392 1.31e-89 279
MS.gene35407.t1 MTR_3g073560 50.519 289 128 3 190 467 65 349 1.54e-87 280
MS.gene35407.t1 MTR_3g044820 46.774 186 83 4 168 341 27 208 6.24e-55 183
MS.gene35407.t1 MTR_1g090370 32.828 198 112 5 266 458 47 228 6.22e-23 97.4
MS.gene35407.t1 MTR_1g111320 49.474 95 38 2 168 256 128 218 6.08e-18 83.2
MS.gene35407.t1 MTR_8g094690 27.615 239 124 6 257 452 15 247 3.25e-16 79.3
MS.gene35407.t1 MTR_7g068860 24.885 217 143 3 255 455 7 219 1.31e-14 73.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene35407.t1 AT1G08320 58.765 502 177 10 1 493 1 481 0.0 575
MS.gene35407.t1 AT1G08320 58.765 502 177 10 1 493 1 481 0.0 575
MS.gene35407.t1 AT1G08320 58.765 502 177 10 1 493 1 481 0.0 575
MS.gene35407.t1 AT1G08320 65.730 356 120 1 138 493 4 357 9.36e-176 498
MS.gene35407.t1 AT1G08320 65.730 356 120 1 138 493 4 357 9.36e-176 498
MS.gene35407.t1 AT5G06839 45.648 471 183 9 35 466 23 459 2.00e-120 361
MS.gene35407.t1 AT5G06839 57.407 324 112 4 169 466 93 416 4.31e-118 353
MS.gene35407.t1 AT3G12250 55.692 325 131 4 150 465 10 330 1.74e-117 348
MS.gene35407.t1 AT3G12250 55.692 325 131 4 150 465 10 330 1.74e-117 348
MS.gene35407.t1 AT3G12250 55.692 325 131 4 150 465 10 330 1.74e-117 348
MS.gene35407.t1 AT3G12250 55.692 325 131 4 150 465 10 330 1.74e-117 348
MS.gene35407.t1 AT5G06839 57.231 325 112 5 169 466 93 417 9.44e-117 350
MS.gene35407.t1 AT3G12250 58.746 303 107 5 178 465 4 303 1.77e-116 345
MS.gene35407.t1 AT3G12250 58.746 303 107 5 178 465 25 324 3.42e-116 345
MS.gene35407.t1 AT5G06950 57.667 300 115 3 178 465 31 330 5.50e-116 345
MS.gene35407.t1 AT5G06950 57.667 300 115 3 178 465 31 330 5.50e-116 345
MS.gene35407.t1 AT5G06950 57.667 300 115 3 178 465 31 330 5.50e-116 345
MS.gene35407.t1 AT5G06950 57.667 300 115 3 178 465 31 330 5.50e-116 345
MS.gene35407.t1 AT5G06950 57.667 300 115 3 178 465 31 330 5.50e-116 345
MS.gene35407.t1 AT3G12250 58.333 300 113 3 178 465 56 355 4.19e-115 343
MS.gene35407.t1 AT5G06960 59.028 288 109 2 187 465 43 330 2.61e-113 338
MS.gene35407.t1 AT5G06960 59.028 288 109 2 187 465 43 330 2.61e-113 338
MS.gene35407.t1 AT5G06960 59.028 288 109 2 187 465 23 310 5.10e-113 337
MS.gene35407.t1 AT1G22070 56.055 289 118 3 187 466 95 383 6.83e-103 313
MS.gene35407.t1 AT1G77920 51.634 306 138 3 163 465 68 366 1.74e-102 311
MS.gene35407.t1 AT5G10030 47.075 359 171 6 116 465 14 362 2.71e-100 306
MS.gene35407.t1 AT5G10030 47.075 359 171 6 116 465 14 362 2.71e-100 306
MS.gene35407.t1 AT5G10030 47.075 359 171 6 116 465 14 362 2.71e-100 306
MS.gene35407.t1 AT5G10030 47.075 359 171 6 116 465 14 362 2.71e-100 306
MS.gene35407.t1 AT5G10030 47.075 359 171 6 116 465 14 362 2.71e-100 306
MS.gene35407.t1 AT1G68640 54.882 297 119 5 182 465 158 452 1.26e-99 307
MS.gene35407.t1 AT5G65210 51.195 293 134 3 180 465 6 296 2.66e-95 291
MS.gene35407.t1 AT5G65210 51.195 293 134 3 180 465 76 366 2.98e-95 293
MS.gene35407.t1 AT5G65210 51.195 293 134 3 180 465 76 366 2.98e-95 293
MS.gene35407.t1 AT5G65210 51.195 293 134 3 180 465 76 366 2.98e-95 293
MS.gene35407.t1 AT5G65210 51.195 293 134 3 180 465 76 366 2.98e-95 293
MS.gene35407.t1 AT5G65210 51.195 293 134 3 180 465 76 366 2.98e-95 293
MS.gene35407.t1 AT5G65210 51.195 293 134 3 180 465 76 366 2.98e-95 293
MS.gene35407.t1 AT1G58330 26.244 221 148 4 250 455 3 223 2.61e-14 72.8

Find 97 sgRNAs with CRISPR-Local

Find 276 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACTGGAAATGTTCCCTTCT+TGG 0.211576 2.1:-15699344 MS.gene35407:CDS
AATCAAGTTCTCCTATTCTT+TGG 0.233116 2.1:+15700037 None:intergenic
TTCATCAGATCATAATAATA+TGG 0.236469 2.1:-15698974 MS.gene35407:CDS
CTGCTAGTGGCTCCAATTGC+TGG 0.291746 2.1:+15695156 None:intergenic
TTAGAGCTCTTAGTTCTCTT+TGG 0.292211 2.1:-15693877 MS.gene35407:CDS
AAGCTGAACGTTGCTTCCTT+TGG 0.305878 2.1:-15696225 MS.gene35407:CDS
TCAACTCATCATGTCCCTTA+TGG 0.310663 2.1:-15699997 MS.gene35407:CDS
ACTAGCAGAGCAGCAGATAA+TGG 0.313627 2.1:-15695141 MS.gene35407:CDS
TAGAGCTCTTAGTTCTCTTT+GGG 0.313649 2.1:-15693876 MS.gene35407:CDS
GAAAAGTCGTCTAAGGAAAA+AGG 0.321473 2.1:-15697866 MS.gene35407:intron
GCAATGTTTGACATGGAATA+TGG 0.352960 2.1:-15696436 MS.gene35407:CDS
CTAGCAGAGCAGCAGATAAT+GGG 0.357751 2.1:-15695140 MS.gene35407:CDS
TTTGCATATCCGTGGTTGTT+TGG 0.361993 2.1:+15693500 None:intergenic
AATTTAAAAGGGTATGTTCA+TGG 0.367637 2.1:-15697583 MS.gene35407:intron
TAGATTAAAGCTTACACAAT+TGG 0.368639 2.1:-15697718 MS.gene35407:CDS
TTACTACTGTTGAGGTTTGA+TGG 0.373913 2.1:+15699310 None:intergenic
CTTGTTATTGGAGAATACTA+TGG 0.375599 2.1:-15693905 MS.gene35407:CDS
AAGGGTGATTCTGTCTCAAA+AGG 0.379679 2.1:+15699018 None:intergenic
TCTCTTGTTGACACCATTGC+AGG 0.384591 2.1:-15695044 MS.gene35407:CDS
TTCCAGTGTAGCAGCAGGTC+TGG 0.387739 2.1:+15699359 None:intergenic
TTTGTTAGGAATGAAGAATC+TGG 0.392918 2.1:-15699840 MS.gene35407:intron
ATGGATTGGAGTGGTGGTGT+TGG 0.398537 2.1:-15697564 MS.gene35407:CDS
TGAGACGTTTAGCACAAAAC+AGG 0.401597 2.1:-15697900 MS.gene35407:CDS
GTGTGAGTAATCGACATAAT+TGG 0.411816 2.1:+15693951 None:intergenic
CGTTGCTTCCTTTGGATTGG+TGG 0.418885 2.1:-15696217 MS.gene35407:CDS
TTCTTAACTCCGTTAATAAA+CGG 0.419059 2.1:+15696392 None:intergenic
CTGCAAGGAAAAGTCGTCTA+AGG 0.422741 2.1:-15697873 MS.gene35407:CDS
GGCAAGCTTGCCAATCTTGA+AGG 0.422961 2.1:-15694978 MS.gene35407:CDS
AGAAGACAACCGTTTATTAA+CGG 0.423518 2.1:-15696401 MS.gene35407:CDS
TCCCTTATGGAATTCATCAT+AGG 0.425244 2.1:-15699984 MS.gene35407:CDS
ATCCAGACCTGCTGCTACAC+TGG 0.426810 2.1:-15699361 MS.gene35407:CDS
TCAGATGTTGATCCAGCAAT+TGG 0.431974 2.1:-15695168 MS.gene35407:intron
GCAGGAGGACCCCTTGTTGA+TGG 0.438894 2.1:-15695026 MS.gene35407:CDS
CAGGGAGGTGGTAACAAATC+AGG 0.446249 2.1:-15699084 MS.gene35407:CDS
TAATACATTAAACTTGATGA+AGG 0.448293 2.1:+15699952 None:intergenic
GAACGTTGCTTCCTTTGGAT+TGG 0.451843 2.1:-15696220 MS.gene35407:CDS
GACGTGTTTCATCTTATCAA+TGG 0.455217 2.1:-15696262 MS.gene35407:CDS
ATCCTATGATGAATTCCATA+AGG 0.459315 2.1:+15699982 None:intergenic
AAAAGGGTATGTTCATGGAT+TGG 0.465698 2.1:-15697578 MS.gene35407:intron
CAACAAATGGTTGTTGCCAT+AGG 0.467436 2.1:-15694999 MS.gene35407:CDS
CAACAAGAGACTGTTGCAAC+TGG 0.468138 2.1:+15695057 None:intergenic
TAGACCCTCTGAAATTATCA+TGG 0.469132 2.1:-15696191 MS.gene35407:intron
AAGATTGGCAAGCTTGCCTA+TGG 0.469646 2.1:+15694983 None:intergenic
CAGCAGATAATGGGGATGTA+TGG 0.469706 2.1:-15695131 MS.gene35407:CDS
ACGAAGAAAACCTTCAAGAT+TGG 0.470177 2.1:+15694968 None:intergenic
TGGAATCTCATTGGCCAAGA+AGG 0.473970 2.1:+15699330 None:intergenic
ATGTTCATGGATTGGAGTGG+TGG 0.483245 2.1:-15697570 MS.gene35407:CDS
TCCTATGATGAATTCCATAA+GGG 0.488783 2.1:+15699983 None:intergenic
TGTTGATGGTGTTCAACAAA+TGG 0.493901 2.1:-15695012 MS.gene35407:CDS
GAGGTTTGATGGAATCTCAT+TGG 0.494784 2.1:+15699321 None:intergenic
CATTCAAAGAGCACGCTCTC+AGG 0.496954 2.1:-15697688 MS.gene35407:intron
AACAACCACGGATATGCAAA+TGG 0.498862 2.1:-15693497 MS.gene35407:CDS
GATTGGAGTGGTGGTGTTGG+AGG 0.512468 2.1:-15697561 MS.gene35407:CDS
AGGGTGATTCTGTCTCAAAA+GGG 0.514880 2.1:+15699019 None:intergenic
ACTAACCATGATAATTTCAG+AGG 0.514912 2.1:+15696186 None:intergenic
ATCAGCAGCAGCCAAAGAAA+AGG 0.524596 2.1:-15698857 MS.gene35407:intron
ATAAACACCTTTGCATCAAG+TGG 0.529769 2.1:+15698013 None:intergenic
CACAAAACAGGGAGGCTGCA+AGG 0.543811 2.1:-15697888 MS.gene35407:CDS
TATTTGGAAATACAGGGAGG+TGG 0.546007 2.1:-15699096 MS.gene35407:intron
AACATTTCCAGTGTAGCAGC+AGG 0.549096 2.1:+15699354 None:intergenic
ATTATCTGCTGCTCTGCTAG+TGG 0.553911 2.1:+15695143 None:intergenic
ATTACTCACACTTCGTCAAG+CGG 0.557736 2.1:-15693939 MS.gene35407:CDS
AATTGAAGGCTGATAACTTG+AGG 0.558228 2.1:-15693988 MS.gene35407:intron
TTATTAACGGAGTTAAGAAA+CGG 0.562286 2.1:-15696388 MS.gene35407:CDS
GATCAAATATTTAGACTCAA+AGG 0.563784 2.1:-15696301 MS.gene35407:CDS
GGAATCTCATTGGCCAAGAA+GGG 0.563800 2.1:+15699331 None:intergenic
AACAAGGGGTCCTCCTGCAA+TGG 0.567176 2.1:+15695031 None:intergenic
AGATAAGCCACTTGATGCAA+AGG 0.567470 2.1:-15698020 MS.gene35407:intron
GTCTAAAACCACCAATCCAA+AGG 0.567699 2.1:+15696209 None:intergenic
AGAGAGTATTACTACTGTTG+AGG 0.572603 2.1:+15699302 None:intergenic
TTTGTGAAATGATTCTGAGA+AGG 0.574512 2.1:+15693469 None:intergenic
GCAGAGGAAGCTCTCTCACA+AGG 0.575222 2.1:-15695086 MS.gene35407:CDS
TTGACATGGAATATGGAAGA+TGG 0.583833 2.1:-15696429 MS.gene35407:CDS
TTGAACCATTTGCATATCCG+TGG 0.584485 2.1:+15693492 None:intergenic
TTTGTTGAACACCATCAACA+AGG 0.585380 2.1:+15695015 None:intergenic
TGCATGGCGAGCCAAAGAAT+AGG 0.589611 2.1:-15700048 MS.gene35407:CDS
AGATAATGAAATGAGAGTAA+TGG 0.594040 2.1:-15696347 MS.gene35407:CDS
TATTTGATTCTGTGATGAAG+AGG 0.598778 2.1:+15698879 None:intergenic
GAAATGAGAGTAATGGTGGA+TGG 0.599016 2.1:-15696340 MS.gene35407:CDS
ATATATTTAACTTACTCTCG+TGG 0.607255 2.1:+15693845 None:intergenic
TTCATCTTATCAATGGCATG+TGG 0.610713 2.1:-15696255 MS.gene35407:CDS
TAATGAAATGAGAGTAATGG+TGG 0.614982 2.1:-15696344 MS.gene35407:CDS
TTGTTGAACACCATCAACAA+GGG 0.615909 2.1:+15695016 None:intergenic
CTTGTTGACACCATTGCAGG+AGG 0.617809 2.1:-15695041 MS.gene35407:CDS
GTTAAGAAACGGATTGCAAG+CGG 0.631491 2.1:-15696377 MS.gene35407:CDS
GTTGGAGGCAATATAAGCTC+TGG 0.639351 2.1:-15697546 MS.gene35407:intron
TAGCAGAGCAGCAGATAATG+GGG 0.639568 2.1:-15695139 MS.gene35407:CDS
GCATTCTTCACAGCAAGCAG+AGG 0.646463 2.1:-15695102 MS.gene35407:CDS
GAGACGTTTAGCACAAAACA+GGG 0.648005 2.1:-15697899 MS.gene35407:CDS
AGGAGGTGCAATGTTTGACA+TGG 0.651643 2.1:-15696443 MS.gene35407:CDS
TGTTGAACACCATCAACAAG+GGG 0.659117 2.1:+15695017 None:intergenic
CTAACCATGATAATTTCAGA+GGG 0.659541 2.1:+15696187 None:intergenic
TAACTCATGCCAAACAACCA+CGG 0.685861 2.1:-15693509 MS.gene35407:CDS
GGAGGTGGTAACAAATCAGG+AGG 0.698135 2.1:-15699081 MS.gene35407:CDS
TAATGGGGATGTATGGACTG+AGG 0.699689 2.1:-15695124 MS.gene35407:CDS
GGTATGTTCATGGATTGGAG+TGG 0.755721 2.1:-15697573 MS.gene35407:CDS
ACGTTTAGCACAAAACAGGG+AGG 0.779708 2.1:-15697896 MS.gene35407:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATATAAAGTTAATAGATT+AGG - chr2.1:15694011-15694030 MS.gene35407:intron 10.0%
!! ATATATATATATATATGTGT+GGG - chr2.1:15697707-15697726 MS.gene35407:CDS 10.0%
!! ATTATATATTTACATTTAGT+TGG - chr2.1:15699690-15699709 MS.gene35407:intron 10.0%
!! GAATTATAAAAATATACAAT+AGG - chr2.1:15696217-15696236 MS.gene35407:CDS 10.0%
!! GTATAGTTAAATAATTTAAT+CGG + chr2.1:15694381-15694400 None:intergenic 10.0%
!! TAATTAAAGATAAAGAAAAA+TGG + chr2.1:15699898-15699917 None:intergenic 10.0%
!! TATATATATATATATATGTG+TGG - chr2.1:15697706-15697725 MS.gene35407:CDS 10.0%
!! TATTTATTACTAAAAAAAAG+TGG + chr2.1:15696752-15696771 None:intergenic 10.0%
!! TCTTCAATAAATTATAAATA+AGG - chr2.1:15693580-15693599 MS.gene35407:intron 10.0%
!! TTATTGTATTAATAAATTGT+AGG - chr2.1:15697044-15697063 MS.gene35407:intron 10.0%
!! TTGAATATAACAAAATAAAT+TGG + chr2.1:15699956-15699975 None:intergenic 10.0%
!!! ATTTTAACTGTTAATTTAAA+AGG - chr2.1:15695912-15695931 MS.gene35407:intron 10.0%
!!! GAGTTTATATATTTTAAAAA+AGG + chr2.1:15696268-15696287 None:intergenic 10.0%
!!! TACTAGTAATTTATTATTTT+TGG - chr2.1:15696068-15696087 MS.gene35407:intron 10.0%
!!! TCTATAATTAATTTGTAATT+TGG - chr2.1:15697363-15697382 MS.gene35407:intron 10.0%
!!! TTTTAACTGTTAATTTAAAA+GGG - chr2.1:15695913-15695932 MS.gene35407:intron 10.0%
!! AATAAATTACTAGTAAATGA+TGG + chr2.1:15696063-15696082 None:intergenic 15.0%
!! ACAAAATAAATTGTAACAAA+CGG - chr2.1:15697734-15697753 MS.gene35407:CDS 15.0%
!! AGTTATTTATTCATAGATTT+CGG + chr2.1:15696188-15696207 None:intergenic 15.0%
!! TAAGCATAATTAAAATAGAT+TGG + chr2.1:15694239-15694258 None:intergenic 15.0%
!! TAATAAAGGAATTCTATTAT+GGG - chr2.1:15697422-15697441 MS.gene35407:intron 15.0%
!! TTAATAAAGGAATTCTATTA+TGG - chr2.1:15697421-15697440 MS.gene35407:intron 15.0%
!! TTAATTAATGAAATCAATGT+CGG - chr2.1:15697904-15697923 MS.gene35407:CDS 15.0%
!!! AAATTTAAAGCCTTTTATTT+TGG - chr2.1:15694074-15694093 MS.gene35407:intron 15.0%
!!! ATTGTTATTGACAATTTTAT+TGG - chr2.1:15698592-15698611 MS.gene35407:intron 15.0%
!!! CATTGTTTCAAATTATTTTT+TGG - chr2.1:15696536-15696555 MS.gene35407:intron 15.0%
!!! GTTGAAATACATTTTAATTA+TGG - chr2.1:15699738-15699757 MS.gene35407:intron 15.0%
!!! TTATTTTGTTATATTCAAAC+AGG - chr2.1:15699958-15699977 MS.gene35407:CDS 15.0%
!!! TTTACATTTTGATATTATGT+CGG + chr2.1:15696966-15696985 None:intergenic 15.0%
!!! TTTTACCAAATAATTGTAAA+AGG + chr2.1:15694055-15694074 None:intergenic 15.0%
!!! TTTTTTTTGTTGTAGAAAAA+AGG - chr2.1:15695449-15695468 MS.gene35407:intron 15.0%
!! AAAAGCCAAAGTATATATAA+AGG + chr2.1:15696693-15696712 None:intergenic 20.0%
!! AAAATGTTTCATTCAAAAGT+TGG - chr2.1:15699153-15699172 MS.gene35407:intron 20.0%
!! AACGTAAAACTTCTTAATAA+AGG - chr2.1:15697408-15697427 MS.gene35407:intron 20.0%
!! ATCACACAAGAAATTAAATT+TGG - chr2.1:15696896-15696915 MS.gene35407:intron 20.0%
!! CAAAATAAATTGTAACAAAC+GGG - chr2.1:15697735-15697754 MS.gene35407:CDS 20.0%
!! GTATCTATATCTATATGTAT+AGG + chr2.1:15695676-15695695 None:intergenic 20.0%
!! TAATACATTAAACTTGATGA+AGG + chr2.1:15693558-15693577 None:intergenic 20.0%
!! TAGTTTATACATGATAGAAA+AGG + chr2.1:15696309-15696328 None:intergenic 20.0%
!! TTCATCAGATCATAATAATA+TGG - chr2.1:15694533-15694552 MS.gene35407:intron 20.0%
!! TTGTATTAATAAATTGTAGG+AGG - chr2.1:15697047-15697066 MS.gene35407:intron 20.0%
!!! AATGTTTTTGTTTGTTTGTT+AGG - chr2.1:15693653-15693672 MS.gene35407:intron 20.0%
!!! AGTGATTATGTTAGTTTTTA+GGG + chr2.1:15699312-15699331 None:intergenic 20.0%
!!! ATACTTTTGAACATAAACAT+TGG + chr2.1:15696243-15696262 None:intergenic 20.0%
!!! ATATGCTAATGTTGATAATT+TGG - chr2.1:15698311-15698330 MS.gene35407:intron 20.0%
!!! CAATACCTTTTACAATTATT+TGG - chr2.1:15694047-15694066 MS.gene35407:intron 20.0%
!!! CATTCATATTTTTCAATTGA+AGG - chr2.1:15699505-15699524 MS.gene35407:intron 20.0%
!!! CTATACTAATGATTTGTATT+TGG - chr2.1:15694395-15694414 MS.gene35407:intron 20.0%
!!! GCATTATTTTAATTGAATCA+AGG + chr2.1:15694343-15694362 None:intergenic 20.0%
!!! TAGTACTGTTTTATTCATTT+TGG - chr2.1:15693606-15693625 MS.gene35407:intron 20.0%
!!! TAGTGATTATGTTAGTTTTT+AGG + chr2.1:15699313-15699332 None:intergenic 20.0%
!!! TTGAATGAAACATTTTAAGA+TGG + chr2.1:15699149-15699168 None:intergenic 20.0%
!!! TTTACTATTAACCTTTTCTT+TGG + chr2.1:15694664-15694683 None:intergenic 20.0%
! AAACTATTTCAAAGAGATGT+TGG + chr2.1:15697611-15697630 None:intergenic 25.0%
! AAAGTCAAAACTTGATCTTA+TGG - chr2.1:15696124-15696143 MS.gene35407:intron 25.0%
! AAGAAACAGTTCACAAAAAA+TGG - chr2.1:15695094-15695113 MS.gene35407:CDS 25.0%
! AAGTCAAAACTTGATCTTAT+GGG - chr2.1:15696125-15696144 MS.gene35407:intron 25.0%
! AATAAAAAAGTGAGTGTCAT+AGG - chr2.1:15697966-15697985 MS.gene35407:intron 25.0%
! ACTTTATATTTCAGCAGTTA+TGG + chr2.1:15694002-15694021 None:intergenic 25.0%
! AGATAATGAAATGAGAGTAA+TGG - chr2.1:15697160-15697179 MS.gene35407:intron 25.0%
! AGCAAAATTATAACACCATT+TGG + chr2.1:15699840-15699859 None:intergenic 25.0%
! AGCAATATTCAAACTATATG+TGG + chr2.1:15698666-15698685 None:intergenic 25.0%
! AGTCTCCTTTATATATACTT+TGG - chr2.1:15696685-15696704 MS.gene35407:intron 25.0%
! ATAAAAAAGTGAGTGTCATA+GGG - chr2.1:15697967-15697986 MS.gene35407:intron 25.0%
! ATAGATCACAAGGAAATAAT+GGG + chr2.1:15698732-15698751 None:intergenic 25.0%
! ATGTTCATGTTTATATGCTA+AGG - chr2.1:15695559-15695578 MS.gene35407:intron 25.0%
! CAAAAATGTGCACATAAAAA+TGG + chr2.1:15695358-15695377 None:intergenic 25.0%
! CAAAATTTCCCTTAGTTTAT+GGG + chr2.1:15694745-15694764 None:intergenic 25.0%
! CAGATAATAAAATGTTAGGT+AGG + chr2.1:15698799-15698818 None:intergenic 25.0%
! CATATTAATTGTGAAGAGTT+TGG + chr2.1:15697018-15697037 None:intergenic 25.0%
! GAAAGAAAGAAAAAAAGCAA+TGG - chr2.1:15693846-15693865 MS.gene35407:intron 25.0%
! GATCAAATATTTAGACTCAA+AGG - chr2.1:15697206-15697225 MS.gene35407:intron 25.0%
! GATTTGTATTTGGAAATACA+GGG - chr2.1:15694405-15694424 MS.gene35407:intron 25.0%
! GCAATAATTTACTGTTACAT+TGG + chr2.1:15698241-15698260 None:intergenic 25.0%
! GTACCAGATAATAAAATGTT+AGG + chr2.1:15698803-15698822 None:intergenic 25.0%
! TAGATTAAAGCTTACACAAT+TGG - chr2.1:15695789-15695808 MS.gene35407:intron 25.0%
! TATGAGATTAGCAACATAAT+TGG + chr2.1:15699038-15699057 None:intergenic 25.0%
! TCAGTAAAAATCATGCAAAA+GGG + chr2.1:15693977-15693996 None:intergenic 25.0%
! TTAATTTCATGCATGTTTGT+AGG - chr2.1:15699716-15699735 MS.gene35407:intron 25.0%
! TTATTAACGGAGTTAAGAAA+CGG - chr2.1:15697119-15697138 MS.gene35407:intron 25.0%
! TTCTTAACTCCGTTAATAAA+CGG + chr2.1:15697118-15697137 None:intergenic 25.0%
! TTGAATTTGTACTATCTTCT+TGG - chr2.1:15694789-15694808 MS.gene35407:intron 25.0%
! TTGTTAGTACAACATAATAG+TGG + chr2.1:15694951-15694970 None:intergenic 25.0%
!! AAAAAACGCACTTTAAGAAA+AGG - chr2.1:15696836-15696855 MS.gene35407:intron 25.0%
!! AAAGAGTGTGTATTATAAAG+AGG + chr2.1:15697881-15697900 None:intergenic 25.0%
!! AAGAGTGTGTATTATAAAGA+GGG + chr2.1:15697880-15697899 None:intergenic 25.0%
!! AATCATTATGGTATTGGAAA+TGG + chr2.1:15693901-15693920 None:intergenic 25.0%
!! AATTTAAAAGGGTATGTTCA+TGG - chr2.1:15695924-15695943 MS.gene35407:intron 25.0%
!! ATATATTTAACTTACTCTCG+TGG + chr2.1:15699665-15699684 None:intergenic 25.0%
!! ATATTAAAGCTGCTTTCAAA+GGG - chr2.1:15696330-15696349 MS.gene35407:CDS 25.0%
!! CTACCTAACATTTTATTATC+TGG - chr2.1:15698797-15698816 MS.gene35407:intron 25.0%
!! TATATTAAAGCTGCTTTCAA+AGG - chr2.1:15696329-15696348 MS.gene35407:CDS 25.0%
!! TGAATATTTCTTTTGCAGTT+TGG - chr2.1:15696360-15696379 MS.gene35407:CDS 25.0%
!! TGATTTGTATTTGGAAATAC+AGG - chr2.1:15694404-15694423 MS.gene35407:intron 25.0%
!! TTACACACTAATTTGCATTA+AGG - chr2.1:15698279-15698298 MS.gene35407:intron 25.0%
!! TTTCAACTATTTTCCCTTAT+TGG - chr2.1:15699442-15699461 MS.gene35407:intron 25.0%
!! TTTTGCAGTTTGGATTAATT+CGG - chr2.1:15696370-15696389 MS.gene35407:CDS 25.0%
!! TTTTTAACAACTTGTAGCAA+AGG - chr2.1:15697655-15697674 MS.gene35407:intron 25.0%
!!! ACTCATTGCATTTTTTTTAC+AGG - chr2.1:15695741-15695760 MS.gene35407:intron 25.0%
!!! AGAAGATGCTTTTTTACTTA+AGG + chr2.1:15694511-15694530 None:intergenic 25.0%
!!! CTTTTTTGCAATTTGAATCA+AGG - chr2.1:15698688-15698707 MS.gene35407:intron 25.0%
!!! GAAGATGCTTTTTTACTTAA+GGG + chr2.1:15694510-15694529 None:intergenic 25.0%
!!! TTGATTTTCTGAAATCTGTT+GGG + chr2.1:15694836-15694855 None:intergenic 25.0%
!!! TTTGATTTTCTGAAATCTGT+TGG + chr2.1:15694837-15694856 None:intergenic 25.0%
AATAAAGCAGTAGCTAGTAT+AGG - chr2.1:15699353-15699372 MS.gene35407:CDS 30.0%
AATCAAGTTCTCCTATTCTT+TGG + chr2.1:15693473-15693492 None:intergenic 30.0%
ACTAACCATGATAATTTCAG+AGG + chr2.1:15697324-15697343 None:intergenic 30.0%
AGAAGACAACCGTTTATTAA+CGG - chr2.1:15697106-15697125 MS.gene35407:intron 30.0%
AGAGGATCAACCAAAATAAA+AGG + chr2.1:15694087-15694106 None:intergenic 30.0%
AGATAAGCAATAAGCCAATA+AGG + chr2.1:15699459-15699478 None:intergenic 30.0%
AGTAGTTAACTCATTTCTTG+AGG - chr2.1:15699248-15699267 MS.gene35407:intron 30.0%
ATCCTATGATGAATTCCATA+AGG + chr2.1:15693528-15693547 None:intergenic 30.0%
ATGTGATATGGATAGCAAAA+TGG + chr2.1:15695131-15695150 None:intergenic 30.0%
CAATCATCTTCAATGTGATA+TGG + chr2.1:15695143-15695162 None:intergenic 30.0%
CATAGATCACAAGGAAATAA+TGG + chr2.1:15698733-15698752 None:intergenic 30.0%
CATCAAAGAAAAAATCTGAG+AGG + chr2.1:15694105-15694124 None:intergenic 30.0%
CCAAAATTTCCCTTAGTTTA+TGG + chr2.1:15694746-15694765 None:intergenic 30.0%
CCCTTAAATTCAATCAAGAT+CGG + chr2.1:15698843-15698862 None:intergenic 30.0%
CCGATCTTGATTGAATTTAA+GGG - chr2.1:15698840-15698859 MS.gene35407:intron 30.0%
CCTTAAATTCAATCAAGATC+GGG + chr2.1:15698842-15698861 None:intergenic 30.0%
CTAACCATGATAATTTCAGA+GGG + chr2.1:15697323-15697342 None:intergenic 30.0%
CTGCAAAAGAAATATTCAAG+TGG + chr2.1:15696358-15696377 None:intergenic 30.0%
GATAAGCAATAAGCCAATAA+GGG + chr2.1:15699458-15699477 None:intergenic 30.0%
GATATAACAACGTACATTTG+TGG + chr2.1:15698777-15698796 None:intergenic 30.0%
GTCAGTAAAAATCATGCAAA+AGG + chr2.1:15693978-15693997 None:intergenic 30.0%
TAAAAAAGTGAGTGTCATAG+GGG - chr2.1:15697968-15697987 MS.gene35407:intron 30.0%
TAATGAAATGAGAGTAATGG+TGG - chr2.1:15697163-15697182 MS.gene35407:intron 30.0%
TATTTGATTCTGTGATGAAG+AGG + chr2.1:15694631-15694650 None:intergenic 30.0%
TCAACCAAGAACAAAAAAGA+TGG + chr2.1:15695240-15695259 None:intergenic 30.0%
TCCTATGATGAATTCCATAA+GGG + chr2.1:15693527-15693546 None:intergenic 30.0%
TCTTGTGTGATTAAACAAAG+TGG + chr2.1:15696887-15696906 None:intergenic 30.0%
TTAAATTACCTCCACTACTT+TGG - chr2.1:15698995-15699014 MS.gene35407:CDS 30.0%
TTATTTCCTTGTGATCTATG+TGG - chr2.1:15698733-15698752 MS.gene35407:intron 30.0%
TTCCATATCCCATAAACTAA+GGG - chr2.1:15694734-15694753 MS.gene35407:intron 30.0%
TTTCCATATCCCATAAACTA+AGG - chr2.1:15694733-15694752 MS.gene35407:intron 30.0%
TTTGTTAGGAATGAAGAATC+TGG - chr2.1:15693667-15693686 MS.gene35407:intron 30.0%
! CAACTCTTTCTAAAAGTAGA+GGG - chr2.1:15693824-15693843 MS.gene35407:intron 30.0%
! CCATAAACTAAGGGAAATTT+TGG - chr2.1:15694743-15694762 MS.gene35407:intron 30.0%
! GATATTTTTCATGTGCCAAA+TGG - chr2.1:15699822-15699841 MS.gene35407:CDS 30.0%
! TCTAAGGTCAGAAAAAAAAG+TGG + chr2.1:15693794-15693813 None:intergenic 30.0%
! TTTGTGAAATGATTCTGAGA+AGG + chr2.1:15700041-15700060 None:intergenic 30.0%
!! CTTGTTATTGGAGAATACTA+TGG - chr2.1:15699602-15699621 MS.gene35407:intron 30.0%
!! TGATATTATGTCGGTTGTTT+TGG + chr2.1:15696957-15696976 None:intergenic 30.0%
!!! AAGTTGGTTTTAGAAAGTGA+TGG - chr2.1:15699169-15699188 MS.gene35407:intron 30.0%
!!! GAAGAATCTGGTTTTGATTT+TGG - chr2.1:15693679-15693698 MS.gene35407:intron 30.0%
AATTCGGCTCTCTATCTTTA+GGG - chr2.1:15696386-15696405 MS.gene35407:CDS 35.0%
AATTGAAGGCTGATAACTTG+AGG - chr2.1:15699519-15699538 MS.gene35407:intron 35.0%
ACGAAGAAAACCTTCAAGAT+TGG + chr2.1:15698542-15698561 None:intergenic 35.0%
AGCACCTAAAATCTCATAGA+GGG - chr2.1:15696659-15696678 MS.gene35407:intron 35.0%
ATAAACACCTTTGCATCAAG+TGG + chr2.1:15695497-15695516 None:intergenic 35.0%
ATTGCATTCCTACTCAGAAA+TGG - chr2.1:15695159-15695178 MS.gene35407:CDS 35.0%
CATCATGTTGCTCAAAAGTT+AGG - chr2.1:15699101-15699120 MS.gene35407:intron 35.0%
CCAATACCATAATGATTCTG+AGG - chr2.1:15693904-15693923 MS.gene35407:CDS 35.0%
CCCGATCTTGATTGAATTTA+AGG - chr2.1:15698839-15698858 MS.gene35407:intron 35.0%
CCTCAGAATCATTATGGTAT+TGG + chr2.1:15693907-15693926 None:intergenic 35.0%
CTATTGCCTCAGAATCATTA+TGG + chr2.1:15693913-15693932 None:intergenic 35.0%
GAAAAGTCGTCTAAGGAAAA+AGG - chr2.1:15695641-15695660 MS.gene35407:intron 35.0%
GACGTGTTTCATCTTATCAA+TGG - chr2.1:15697245-15697264 MS.gene35407:intron 35.0%
GCAATGTTTGACATGGAATA+TGG - chr2.1:15697071-15697090 MS.gene35407:intron 35.0%
GGAAATGAGCAGTATCATAA+TGG + chr2.1:15696731-15696750 None:intergenic 35.0%
GTGTGAGTAATCGACATAAT+TGG + chr2.1:15699559-15699578 None:intergenic 35.0%
TAACAACTTGTAGCAAAGGA+TGG - chr2.1:15697659-15697678 MS.gene35407:intron 35.0%
TAATTCGGCTCTCTATCTTT+AGG - chr2.1:15696385-15696404 MS.gene35407:CDS 35.0%
TAATTGAATCAAGGCGACAA+GGG + chr2.1:15694334-15694353 None:intergenic 35.0%
TCCCTTATGGAATTCATCAT+AGG - chr2.1:15693523-15693542 MS.gene35407:CDS 35.0%
TGCTCAAAAGTTAGGTCATA+AGG - chr2.1:15699109-15699128 MS.gene35407:intron 35.0%
TTAATTGAATCAAGGCGACA+AGG + chr2.1:15694335-15694354 None:intergenic 35.0%
TTACTACTGTTGAGGTTTGA+TGG + chr2.1:15694200-15694219 None:intergenic 35.0%
TTCATCTTATCAATGGCATG+TGG - chr2.1:15697252-15697271 MS.gene35407:intron 35.0%
TTCATGTCAGAAAATCGTTC+AGG + chr2.1:15694882-15694901 None:intergenic 35.0%
TTCCCTTAGTTTATGGGATA+TGG + chr2.1:15694739-15694758 None:intergenic 35.0%
TTGACATGGAATATGGAAGA+TGG - chr2.1:15697078-15697097 MS.gene35407:intron 35.0%
TTGTATTTGGAAATACAGGG+AGG - chr2.1:15694408-15694427 MS.gene35407:intron 35.0%
TTGTTGAACACCATCAACAA+GGG + chr2.1:15698494-15698513 None:intergenic 35.0%
TTGTTGTAGAAAAAAGGAGC+TGG - chr2.1:15695455-15695474 MS.gene35407:intron 35.0%
TTTAGTGAAGAAAGAGCTTG+TGG - chr2.1:15698092-15698111 MS.gene35407:intron 35.0%
TTTGTTGAACACCATCAACA+AGG + chr2.1:15698495-15698514 None:intergenic 35.0%
! AAAAGGGTATGTTCATGGAT+TGG - chr2.1:15695929-15695948 MS.gene35407:intron 35.0%
! CCAACTCTTTCTAAAAGTAG+AGG - chr2.1:15693823-15693842 MS.gene35407:intron 35.0%
! CTAACTTTTGAGCAACATGA+TGG + chr2.1:15699103-15699122 None:intergenic 35.0%
! GAGTTGGTTATGCTTATCTA+AGG + chr2.1:15693810-15693829 None:intergenic 35.0%
! GTTTTGCAAGGAGTTAAGAA+TGG - chr2.1:15693721-15693740 MS.gene35407:intron 35.0%
! TAGAGCTCTTAGTTCTCTTT+GGG - chr2.1:15699631-15699650 MS.gene35407:intron 35.0%
! TATGCCCTCTATGAGATTTT+AGG + chr2.1:15696666-15696685 None:intergenic 35.0%
! TTAGAGCTCTTAGTTCTCTT+TGG - chr2.1:15699630-15699649 MS.gene35407:intron 35.0%
!! AGAGAGTATTACTACTGTTG+AGG + chr2.1:15694208-15694227 None:intergenic 35.0%
!! CCTCTACTTTTAGAAAGAGT+TGG + chr2.1:15693826-15693845 None:intergenic 35.0%
!! CTGAAAGAGCTTTGTCTTTT+AGG - chr2.1:15699280-15699299 MS.gene35407:intron 35.0%
!! GAAGAAGCAATTGTTTTGCA+AGG - chr2.1:15693709-15693728 MS.gene35407:intron 35.0%
!! TAGACCCTCTGAAATTATCA+TGG - chr2.1:15697316-15697335 MS.gene35407:intron 35.0%
!! TGTTGATGGTGTTCAACAAA+TGG - chr2.1:15698495-15698514 MS.gene35407:intron 35.0%
!!! CATGCCATCTTTTTTGTTCT+TGG - chr2.1:15695233-15695252 MS.gene35407:intron 35.0%
!!! GAACTTGATTTTTCTGAGAC+AGG - chr2.1:15693483-15693502 MS.gene35407:CDS 35.0%
AACAACCACGGATATGCAAA+TGG - chr2.1:15700010-15700029 MS.gene35407:CDS 40.0%
AAGGGTGATTCTGTCTCAAA+AGG + chr2.1:15694492-15694511 None:intergenic 40.0%
AATCATGCAAAAGGGTAGTG+AGG + chr2.1:15693969-15693988 None:intergenic 40.0%
AGATAAGCCACTTGATGCAA+AGG - chr2.1:15695487-15695506 MS.gene35407:intron 40.0%
AGGGTGATTCTGTCTCAAAA+GGG + chr2.1:15694491-15694510 None:intergenic 40.0%
ATTACTCACACTTCGTCAAG+CGG - chr2.1:15699568-15699587 MS.gene35407:intron 40.0%
ATTCGGCTCTCTATCTTTAG+GGG - chr2.1:15696387-15696406 MS.gene35407:CDS 40.0%
CAACAAATGGTTGTTGCCAT+AGG - chr2.1:15698508-15698527 MS.gene35407:intron 40.0%
CAGAAAATCGTTCAGGAATC+AGG + chr2.1:15694875-15694894 None:intergenic 40.0%
CCATTTGACCATTTCTGAGT+AGG + chr2.1:15695170-15695189 None:intergenic 40.0%
CCTACTCAGAAATGGTCAAA+TGG - chr2.1:15695167-15695186 MS.gene35407:CDS 40.0%
CTTATGAGAAAGTGACGTTG+CGG + chr2.1:15698178-15698197 None:intergenic 40.0%
GAGACGTTTAGCACAAAACA+GGG - chr2.1:15695608-15695627 MS.gene35407:intron 40.0%
GAGCACCTAAAATCTCATAG+AGG - chr2.1:15696658-15696677 MS.gene35407:intron 40.0%
GAGGTTTGATGGAATCTCAT+TGG + chr2.1:15694189-15694208 None:intergenic 40.0%
GTTGTCATATGTCAGTTGTG+TGG - chr2.1:15698197-15698216 MS.gene35407:intron 40.0%
TAACTCATGCCAAACAACCA+CGG - chr2.1:15699998-15700017 MS.gene35407:CDS 40.0%
TATTTGGAAATACAGGGAGG+TGG - chr2.1:15694411-15694430 MS.gene35407:intron 40.0%
TCAACTCATCATGTCCCTTA+TGG - chr2.1:15693510-15693529 MS.gene35407:CDS 40.0%
TCAGATGTTGATCCAGCAAT+TGG - chr2.1:15698339-15698358 MS.gene35407:intron 40.0%
TGAGACGTTTAGCACAAAAC+AGG - chr2.1:15695607-15695626 MS.gene35407:intron 40.0%
TGTTGAACACCATCAACAAG+GGG + chr2.1:15698493-15698512 None:intergenic 40.0%
TTGAACCATTTGCATATCCG+TGG + chr2.1:15700018-15700037 None:intergenic 40.0%
TTTGCATATCCGTGGTTGTT+TGG + chr2.1:15700010-15700029 None:intergenic 40.0%
! GAAATGAGAGTAATGGTGGA+TGG - chr2.1:15697167-15697186 MS.gene35407:intron 40.0%
! GACTAGCTAGTGCAATAATG+TGG + chr2.1:15696933-15696952 None:intergenic 40.0%
! GTCTAAAACCACCAATCCAA+AGG + chr2.1:15697301-15697320 None:intergenic 40.0%
! TCTTGAAGGTTTTCTTCGTC+AGG - chr2.1:15698543-15698562 MS.gene35407:intron 40.0%
!! GATTCTGAGGCAATAGACAT+GGG - chr2.1:15693917-15693936 MS.gene35407:CDS 40.0%
!! GCACGCTCTTTTCTTGTTAT+TGG - chr2.1:15699590-15699609 MS.gene35407:intron 40.0%
!! GTTAAGAAACGGATTGCAAG+CGG - chr2.1:15697130-15697149 MS.gene35407:intron 40.0%
!! TGATTCTGAGGCAATAGACA+TGG - chr2.1:15693916-15693935 MS.gene35407:CDS 40.0%
!! TGTCATAGGGGTGTCTAAAA+TGG - chr2.1:15697980-15697999 MS.gene35407:intron 40.0%
AACATTTCCAGTGTAGCAGC+AGG + chr2.1:15694156-15694175 None:intergenic 45.0%
AAGATTGGCAAGCTTGCCTA+TGG + chr2.1:15698527-15698546 None:intergenic 45.0%
AAGCTGAACGTTGCTTCCTT+TGG - chr2.1:15697282-15697301 MS.gene35407:intron 45.0%
AAGGTGTGGGGTTACAAACT+TGG - chr2.1:15693940-15693959 MS.gene35407:CDS 45.0%
ACGTTTAGCACAAAACAGGG+AGG - chr2.1:15695611-15695630 MS.gene35407:intron 45.0%
ACTAGCAGAGCAGCAGATAA+TGG - chr2.1:15698366-15698385 MS.gene35407:intron 45.0%
AGAGAGAGAGAGTGAAGGAT+AGG - chr2.1:15694922-15694941 MS.gene35407:intron 45.0%
ATCAGCAGCAGCCAAAGAAA+AGG - chr2.1:15694650-15694669 MS.gene35407:intron 45.0%
ATGCAGCCACATAGATCACA+AGG + chr2.1:15698742-15698761 None:intergenic 45.0%
ATTATCTGCTGCTCTGCTAG+TGG + chr2.1:15698367-15698386 None:intergenic 45.0%
CAACAAGAGACTGTTGCAAC+TGG + chr2.1:15698453-15698472 None:intergenic 45.0%
CACTGGAAATGTTCCCTTCT+TGG - chr2.1:15694163-15694182 MS.gene35407:intron 45.0%
CTAGCAGAGCAGCAGATAAT+GGG - chr2.1:15698367-15698386 MS.gene35407:intron 45.0%
CTGCAAGGAAAAGTCGTCTA+AGG - chr2.1:15695634-15695653 MS.gene35407:intron 45.0%
GAACGTTGCTTCCTTTGGAT+TGG - chr2.1:15697287-15697306 MS.gene35407:intron 45.0%
GCTAGTGCAATAATGTGGCA+AGG + chr2.1:15696928-15696947 None:intergenic 45.0%
GGAATCTCATTGGCCAAGAA+GGG + chr2.1:15694179-15694198 None:intergenic 45.0%
GTTGGAGGCAATATAAGCTC+TGG - chr2.1:15695961-15695980 MS.gene35407:intron 45.0%
TAGCAGAGCAGCAGATAATG+GGG - chr2.1:15698368-15698387 MS.gene35407:intron 45.0%
TCTCTTGTTGACACCATTGC+AGG - chr2.1:15698463-15698482 MS.gene35407:intron 45.0%
TGACGTGACAACCAAAGTAG+TGG + chr2.1:15699009-15699028 None:intergenic 45.0%
TGGAATCTCATTGGCCAAGA+AGG + chr2.1:15694180-15694199 None:intergenic 45.0%
! AATAGACATGGGAAGGTGTG+GGG - chr2.1:15693928-15693947 MS.gene35407:CDS 45.0%
! AGGAGGTGCAATGTTTGACA+TGG - chr2.1:15697064-15697083 MS.gene35407:intron 45.0%
! CAATAGACATGGGAAGGTGT+GGG - chr2.1:15693927-15693946 MS.gene35407:CDS 45.0%
! TAATGGGGATGTATGGACTG+AGG - chr2.1:15698383-15698402 MS.gene35407:intron 45.0%
!! ATGTTCATGGATTGGAGTGG+TGG - chr2.1:15695937-15695956 MS.gene35407:intron 45.0%
!! CAGCAGATAATGGGGATGTA+TGG - chr2.1:15698376-15698395 MS.gene35407:intron 45.0%
!! GGTATGTTCATGGATTGGAG+TGG - chr2.1:15695934-15695953 MS.gene35407:intron 45.0%
!! AATTAAATAAAACTTATATA+TGG - chr2.1:15695420-15695439 MS.gene35407:intron 5.0%
CAGGGAGGTGGTAACAAATC+AGG - chr2.1:15694423-15694442 MS.gene35407:intron 50.0%
CGTGACAACCAAAGTAGTGG+AGG + chr2.1:15699006-15699025 None:intergenic 50.0%
CTGAGGCAATAGACATGGGA+AGG - chr2.1:15693921-15693940 MS.gene35407:CDS 50.0%
CTTGTTGACACCATTGCAGG+AGG - chr2.1:15698466-15698485 MS.gene35407:intron 50.0%
GAGAGAGAGAGAGAGAGTGA+AGG - chr2.1:15694917-15694936 MS.gene35407:intron 50.0%
GCAATAGACATGGGAAGGTG+TGG - chr2.1:15693926-15693945 MS.gene35407:CDS 50.0%
GCATTCTTCACAGCAAGCAG+AGG - chr2.1:15698405-15698424 MS.gene35407:intron 50.0%
GGAGGTGGTAACAAATCAGG+AGG - chr2.1:15694426-15694445 MS.gene35407:intron 50.0%
GGCAAGCTTGCCAATCTTGA+AGG - chr2.1:15698529-15698548 MS.gene35407:intron 50.0%
! CATTCAAAGAGCACGCTCTC+AGG - chr2.1:15695819-15695838 MS.gene35407:intron 50.0%
! CGTTGCTTCCTTTGGATTGG+TGG - chr2.1:15697290-15697309 MS.gene35407:intron 50.0%
!! ATGGATTGGAGTGGTGGTGT+TGG - chr2.1:15695943-15695962 MS.gene35407:intron 50.0%
AACAAGGGGTCCTCCTGCAA+TGG + chr2.1:15698479-15698498 None:intergenic 55.0%
ATCCAGACCTGCTGCTACAC+TGG - chr2.1:15694146-15694165 MS.gene35407:intron 55.0%
CACAAAACAGGGAGGCTGCA+AGG - chr2.1:15695619-15695638 MS.gene35407:intron 55.0%
CTGCTAGTGGCTCCAATTGC+TGG + chr2.1:15698354-15698373 None:intergenic 55.0%
GCAGAGGAAGCTCTCTCACA+AGG - chr2.1:15698421-15698440 MS.gene35407:intron 55.0%
TTCCAGTGTAGCAGCAGGTC+TGG + chr2.1:15694151-15694170 None:intergenic 55.0%
! GATTGGAGTGGTGGTGTTGG+AGG - chr2.1:15695946-15695965 MS.gene35407:intron 55.0%
GCAGGAGGACCCCTTGTTGA+TGG - chr2.1:15698481-15698500 MS.gene35407:intron 60.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 15693462 15700067 15693462 ID=MS.gene35407
chr2.1 mRNA 15693462 15700067 15693462 ID=MS.gene35407.t1;Parent=MS.gene35407
chr2.1 exon 15699958 15700067 15699958 ID=MS.gene35407.t1.exon1;Parent=MS.gene35407.t1
chr2.1 CDS 15699958 15700067 15699958 ID=cds.MS.gene35407.t1;Parent=MS.gene35407.t1
chr2.1 exon 15699766 15699854 15699766 ID=MS.gene35407.t1.exon2;Parent=MS.gene35407.t1
chr2.1 CDS 15699766 15699854 15699766 ID=cds.MS.gene35407.t1;Parent=MS.gene35407.t1
chr2.1 exon 15699314 15699393 15699314 ID=MS.gene35407.t1.exon3;Parent=MS.gene35407.t1
chr2.1 CDS 15699314 15699393 15699314 ID=cds.MS.gene35407.t1;Parent=MS.gene35407.t1
chr2.1 exon 15698858 15699103 15698858 ID=MS.gene35407.t1.exon4;Parent=MS.gene35407.t1
chr2.1 CDS 15698858 15699103 15698858 ID=cds.MS.gene35407.t1;Parent=MS.gene35407.t1
chr2.1 exon 15698021 15698065 15698021 ID=MS.gene35407.t1.exon5;Parent=MS.gene35407.t1
chr2.1 CDS 15698021 15698065 15698021 ID=cds.MS.gene35407.t1;Parent=MS.gene35407.t1
chr2.1 exon 15697867 15697926 15697867 ID=MS.gene35407.t1.exon6;Parent=MS.gene35407.t1
chr2.1 CDS 15697867 15697926 15697867 ID=cds.MS.gene35407.t1;Parent=MS.gene35407.t1
chr2.1 exon 15697689 15697766 15697689 ID=MS.gene35407.t1.exon7;Parent=MS.gene35407.t1
chr2.1 CDS 15697689 15697766 15697689 ID=cds.MS.gene35407.t1;Parent=MS.gene35407.t1
chr2.1 exon 15697547 15697595 15697547 ID=MS.gene35407.t1.exon8;Parent=MS.gene35407.t1
chr2.1 CDS 15697547 15697595 15697547 ID=cds.MS.gene35407.t1;Parent=MS.gene35407.t1
chr2.1 exon 15696192 15696463 15696192 ID=MS.gene35407.t1.exon9;Parent=MS.gene35407.t1
chr2.1 CDS 15696192 15696463 15696192 ID=cds.MS.gene35407.t1;Parent=MS.gene35407.t1
chr2.1 exon 15694965 15695186 15694965 ID=MS.gene35407.t1.exon10;Parent=MS.gene35407.t1
chr2.1 CDS 15694965 15695186 15694965 ID=cds.MS.gene35407.t1;Parent=MS.gene35407.t1
chr2.1 exon 15693860 15694002 15693860 ID=MS.gene35407.t1.exon11;Parent=MS.gene35407.t1
chr2.1 CDS 15693860 15694002 15693860 ID=cds.MS.gene35407.t1;Parent=MS.gene35407.t1
chr2.1 exon 15693462 15693549 15693462 ID=MS.gene35407.t1.exon12;Parent=MS.gene35407.t1
chr2.1 CDS 15693462 15693549 15693462 ID=cds.MS.gene35407.t1;Parent=MS.gene35407.t1
Gene Sequence

>MS.gene35407

ATGGCGAGCCAAAGAATAGGAGAACTTGATTTTTCTGAGACAGGACATTCAACTCATCATGTCCCTTATGGAATTCATCATAGGATTAATAATCCTTCATCAAGTTTAATGTATTAATTCTTCAATAAATTATAAATAAGGAAGTAGTACTGTTTTATTCATTTTGGTTTGTATAGTATTTAATTTAGTATAATGTTTTTGTTTGTTTGTTAGGAATGAAGAATCTGGTTTTGATTTTGGAGAGCTAGAAGAAGCAATTGTTTTGCAAGGAGTTAAGAATGGAAATGATGAAACAAAAGCATGTAAGTTTTGCTTTTTTCTATCAAATACCACTTTTTTTTCTGACCTTAGATAAGCATAACCAACTCTTTCTAAAAGTAGAGGGAAAGAAAGAAAAAAAGCAATGGTTTGAATATGTCTAAAGAGTGCATAGTTACCATTTCCAATACCATAATGATTCTGAGGCAATAGACATGGGAAGGTGTGGGGTTACAAACTTGGAAACCTCACTACCCTTTTGCATGATTTTTACTGACTCCATAACTGCTGAAATATAAAGTTAATAGATTAGGTTCTTCTTTTCTTCAATACCTTTTACAATTATTTGGTAAAAAATTTAAAGCCTTTTATTTTGGTTGATCCTCTCAGATTTTTTCTTTGATGATTCTTTGCAGCTTTTTTCACATCCAGACCTGCTGCTACACTGGAAATGTTCCCTTCTTGGCCAATGAGATTCCATCAAACCTCAACAGTAGTAATACTCTCTATCTTTGACCAATCTATTTTAATTATGCTTATCATAGATGCTTCTTATACATTGTTCAATTCAATTTCAAATAGAATGCATGCTTTTTTTCATGTTTTTTCAGCCCTTGTCGCCTTGATTCAATTAAAATAATGCATGCGACGATATGAGCCGATTAAATTATTTAACTATACTAATGATTTGTATTTGGAAATACAGGGAGGTGGTAACAAATCAGGAGGTGAAAGCAGTGATTCAGCACTATCAAGCAAAAATGAGAACCCTTTTGAGACAGAATCACCCTTAAGTAAAAAAGCATCTTCTTTTTCATCAGATCATAATAATATGGATCAGCAGAATCTTCAGCTACAACAACAGAAGATAATAATATCAAATGATGCTTCTGCTGCTATAAGAACAGCCTCTTCATCACAGAATCAAATATCAGCAGCAGCCAAAGAAAAGGTTAATAGTAAAAAAAAATATTCACTTATACAGTTAAAGTGTTAAATCACTTAGTTATCTCTTTCCATATCCCATAAACTAAGGGAAATTTTGGTCTTTCTTTATTTATTTACTGTTTTGAATTTGTACTATCTTCTTGGTCACGTAAAAACAGCACAGATCCCAACAGATTTCAGAAAATCAAAACAACAGAGAGTTTTCCTGATTCCTGAACGATTTTCTGACATGAAAACATGATAGAGAGAGAGAGAGAGAGAGAGAGTGAAGGATAGGATACCACTATTATGTTGTACTAACAAAAAAACAAAGTGAGAATCTTTTGAGTACTTATCAAAGTTTTTTTCACATTAAAAACTGACTCACTCTCACACACACTCTTCACTTGATATAGTGAAAACTTGTGTTTCTCTAACACAAGTCTAAAGAAACAGTTCACAAAAAATGGCTGAAAATGATCCATTTTGCTATCCATATCACATTGAAGATGATTGCATTCCTACTCAGAAATGGTCAAATGGTCTTCAACATTCTCAAAATTCAGTGAGCACACTCTAATATTATCATGCCATCTTTTTTGTTCTTGGTTGACTTAAAAGTGTAGCATCTTTTTGATATAGCTCAAAAAAATTATCAAGTTATATGCTTAACAAATTTTCTTTTTTTTCTCTCACTCATTTGCTTAACCATTTTTATGTGCACATTTTTGTTCTACACTTGAAATTTGTGTATATCTTTCTGTTTTGCTTTTAATTAAATAAAACTTATATATGGATAATTTTTTTTTTGTTGTAGAAAAAAGGAGCTGGTTCATCATCAGATAAGCCACTTGATGCAAAGGTGTTTATACTTTTAAGTACAAATGTTCATTTTTATGTCTCTTTTTTGTTATGTTCATGTTTATATGCTAAGGTAAAATTTGTACTTGTTTTAGACATTGAGACGTTTAGCACAAAACAGGGAGGCTGCAAGGAAAAGTCGTCTAAGGAAAAAGGTTTGTGTGTCCTATACATATAGATATAGATACACAATAGTTGTAAAAGAATAGAATGTAAAAAATGAAAATAGTGAAACTCATTGCATTTTTTTTACAGGCTTATGTGCAGCAACTTGAGTCAAGTAGATTAAAGCTTACACAATTGGAACAAGACATTCAAAGAGCACGCTCTCAGGTACTAAAGTCAAATATTATTGTATAATATATAGTTTATTTTTATTATTATTTTTACTTTTACTAATTAAGATTTTAACTGTTAATTTAAAAGGGTATGTTCATGGATTGGAGTGGTGGTGTTGGAGGCAATATAAGCTCTGGTGAGTTTATTTTTCATTTTTTTGTGATCATTTTTGAAACTAAGTTTATTTTTTTATTTGTCACATTCAGAAACTTACCATCATTTACTAGTAATTTATTATTTTTGGAAGTATATGTAACTTTTTTAAAAATGACAAGTAAAAGTCAAAACTTGATCTTATGGGTGCTCATTTCAAAACGTAGAGAAGTCTCTGAATCTGACCGAAATCTATGAATAAATAACTCGTGTGTTTGAATTATAAAAATATACAATAGGCCAATGTTTATGTTCAAAAGTATGACCTTTTTTAAAATATATAAACTCTAATATTCAAAACTCTGTCCTTTTCTATCATGTATAAACTATATATTAAAGCTGCTTTCAAAGGGTGCCACTTGAATATTTCTTTTGCAGTTTGGATTAATTCGGCTCTCTATCTTTAGGGGCACTATAATAATACGATGAAGATTACATTTTTAATTATTAGCTAGATATACATCTTTTGCTTTGAAATAATATGTTTTCAACTAATCTTGCTTTGATTTTTTTATCAGAAATGAGTTTTTAAAGATCATTGTTTCAAATTATTTTTTGGTTTACTAAAAGAAAATATAAGTTGTCAAACAAAAAAACAAAAGATATAAAAAGATCATATTTAAATAGCAAACAAAACATCATTTTCTTAATTTGAAAAGAGCACCTAAAATCTCATAGAGGGCATAGTCTCCTTTATATATACTTTGGCTTTTCTTAGAATAATCATTCCATTATGATACTGCTCATTTCCACTTTTTTTTAGTAATAAATAAAAATACAACTTTTGAAAGAAAAAAAAGTTGTAAATAAATAAATAATCATGAATTATCATGCACAAAAAACGCACTTTAAGAAAAGGAAACGCATTACGTAGTATGATTAATCCACTTTGTTTAATCACACAAGAAATTAAATTTGGTTCATTCCTTGCCACATTATTGCACTAGCTAGTCACCAAAACAACCGACATAATATCAAAATGTAAACTATATTTTAATTTTAATTAAATATGAAACCAAACTCTTCACAATTAATATGATATATTTATTGTATTAATAAATTGTAGGAGGTGCAATGTTTGACATGGAATATGGAAGATGGTTAGAAGAAGACAACCGTTTATTAACGGAGTTAAGAAACGGATTGCAAGCGGCGTTAACAGATAATGAAATGAGAGTAATGGTGGATGGATATTTGTGTCATTATGATCAAATATTTAGACTCAAAGGTGTCACTGCTAAATCAGACGTGTTTCATCTTATCAATGGCATGTGGACTTCTCAAGCTGAACGTTGCTTCCTTTGGATTGGTGGTTTTAGACCCTCTGAAATTATCATGGTTAGTACAATACAATACTTTTGATTCTATAATTAATTTGTAATTTGGTATAATCATAAGAGTAGTATGTAACGTAAAACTTCTTAATAAAGGAATTCTATTATGGGTTTGTTAGTTTCAGATTTTTAAAAATAAAAACGCTTTTGATGTACAATAGATATTAATTTTTAGAGATTTTGTAAAAAAGTCAAAGTTGTTTGTTTATTAAAATGAAAATCATTTTTTTAGATAATCACTTGTAGAAAATAATTTTAGAGATATGCTATTAAACCAACATCTCTTTGAAATAGTTTTAGATTATTTTCATTTGCTCATTTTTTTTAACAACTTGTAGCAAAGGATGGACACTTCTAAGATTTATTATTTACTATATATATATATATATGTGTGGGTTTTACAAAATAAATTGTAACAAACGGGCTTTATATACATTTTATTCATATATAGACATTTATAATAAAAAAAATCATATAAATGTGTTCATTATATACTTACATATCATTTCTTATATATAGAGTGCTAGAAACACTATTTTTTAACCCTCTTTATAATACACACTCTTTTATTTAATTAATGAAATCAATGTCGGTTTTGTATAAGTCATGAGATTCACACTGATTTCACTATTAATAAAAAAGTGAGTGTCATAGGGGTGTCTAAAATGGTGTTTCTAACACTCATTTAATATCTAATAATTTAAGATGAAACTTATACTTAAAAAAAATTATTTAAAAATAATTGTGAGTTTTTTTTTTTTAGTGAAGAAAGAGCTTGTGGTTACGTTTAGACATAAATAGAACTAAAAAATTCATTTAACTTAAATAAATAATTAGCGTTCCGCAACGTCACTTTCTCATAAGTTGTCATATGTCAGTTGTGTGGAAGTACGAACTTGCTGTTCCAATGTAACAGTAAATTATTGCATGTACAGACAGTAATAATTACACACTAATTTGCATTAAGGTTAATATTAATATGCTAATGTTGATAATTTGGTGATCTCAGATGTTGATCCAGCAATTGGAGCCACTAGCAGAGCAGCAGATAATGGGGATGTATGGACTGAGGCATTCTTCACAGCAAGCAGAGGAAGCTCTCTCACAAGGACTTGACCAGTTGCAACAGTCTCTTGTTGACACCATTGCAGGAGGACCCCTTGTTGATGGTGTTCAACAAATGGTTGTTGCCATAGGCAAGCTTGCCAATCTTGAAGGTTTTCTTCGTCAGGTACATAATAGAATTTAAATCGTATACATTGTTATTGACAATTTTATTGGAGTTTTTTATCTTATTTATTCGTAACATTTGTTATTTGTCAATTTTTTCCACATATAGTTTGAATATTGCTTTCTTTTTTGCAATTTGAATCAAGGAAAAATATTGTTTTTTATCCCATTATTTCCTTGTGATCTATGTGGCTGCATGCATATATTAAACCACAAATGTACGTTGTTATATCCTACCTAACATTTTATTATCTGGTACTAAAATACTAAATTAACCCGATCTTGATTGAATTTAAGGGTGTCTAACTTTCTTTTACTTTGTCTTGCATCATTAATTCTTATTGACATTTGCTTTTGACTTGTTTATTTATTTATGACGACTTTTTTGCATTTGTATATATAATAATAGTAACTAGATATGTTGATCTTAATTAAATTACCTCCACTACTTTGGTTGTCACGTCAATCTTTCCAATTATGTTGCTAATCTCATAGTGCTTTAGTTTAATATATGAATTTGCTTTGCTACAAATGTTCCATCATGTTGCTCAAAAGTTAGGTCATAAGGTTGATGTAATATTTCCATCTTAAAATGTTTCATTCAAAAGTTGGTTTTAGAAAGTGATGGTTATCTTGCTTAGTTTAAAATTAAAGACATTTTCTTGAATGTTTTCTAGTTAATTAAGTAGTTAACTCATTTCTTGAGGTAAATGATACTGAAAGAGCTTTGTCTTTTAGGAATCAACCCTAAAAACTAACATAATCACTAACTTATTATTAACATTTACTAATAAAGCAGTAGCTAGTATAGGAATTTTACATGTCAGTGATTAGTTAAATTTTTAAGAAGTTGCTCATAAAATTATTTTATATTTTAGTTTCAACTATTTTCCCTTATTGGCTTATTGCTTATCTATATATGAACTATGAAGTCTCATATTCATTCATATTTTTCAATTGAAGGCTGATAACTTGAGGCAACAAACTCTTCACCAATTATGTCGATTACTCACACTTCGTCAAGCGGCACGCTCTTTTCTTGTTATTGGAGAATACTATGGACGACTTAGAGCTCTTAGTTCTCTTTGGGCATCAAGACCACGAGAGTAAGTTAAATATATTCTAAATTATATATTTACATTTAGTTGGTAATTAATTTCATGCATGTTTGTAGGTTGAAATACATTTTAATTATGGTCTTTGATTTAATTTTACTAAGATAGATAGTACTTTTAATTTCATTAAATTATGTTTAAATGATATTTTTCATGTGCCAAATGGTGTTATAATTTTGCTTATAAAAAAATTATGCTCAATTTTTCATCAACTAACCATTTTTCTTTATCTTTAATTAGAAATTTATTTATTTTTTGAGTAATTTATGTATGACCAATTTATTTTGTTATATTCAAACAGGAACATGATCAGTGATGATAACTCATGCCAAACAACCACGGATATGCAAATGGTTCAACCTTCTCAGAATCATTTCACAAATTTCTGA
Protein sequence

>MS.gene35407.t1

MASQRIGELDFSETGHSTHHVPYGIHHRINNPSSSLMNEESGFDFGELEEAIVLQGVKNGNDETKASFFTSRPAATLEMFPSWPMRFHQTSTVGGGNKSGGESSDSALSSKNENPFETESPLSKKASSFSSDHNNMDQQNLQLQQQKIIISNDASAAIRTASSSQNQISAAAKEKKKGAGSSSDKPLDAKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQDIQRARSQGMFMDWSGGVGGNISSGGAMFDMEYGRWLEEDNRLLTELRNGLQAALTDNEMRVMVDGYLCHYDQIFRLKGVTAKSDVFHLINGMWTSQAERCFLWIGGFRPSEIIMMLIQQLEPLAEQQIMGMYGLRHSSQQAEEALSQGLDQLQQSLVDTIAGGPLVDGVQQMVVAIGKLANLEGFLRQADNLRQQTLHQLCRLLTLRQAARSFLVIGEYYGRLRALSSLWASRPRENMISDDNSCQTTTDMQMVQPSQNHFTNF