Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36147.t1 | XP_013457203.1 | 97.1 | 451 | 12 | 1 | 1 | 450 | 1 | 451 | 1.00E-242 | 849 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36147.t1 | Q7NXD4 | 33.4 | 290 | 163 | 8 | 84 | 364 | 5 | 273 | 3.7e-31 | 137.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36147.t1 | A0A072UN52 | 97.1 | 451 | 12 | 1 | 1 | 450 | 1 | 451 | 7.4e-243 | 849.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04915 | MS.gene36147 | 0.831599 | 1.52E-55 | -1.69E-46 |
| MS.gene04917 | MS.gene36147 | 0.830334 | 3.11E-55 | -1.69E-46 |
| MS.gene049703 | MS.gene36147 | -0.817171 | 3.79E-52 | -1.69E-46 |
| MS.gene049756 | MS.gene36147 | 0.804392 | 2.21E-49 | -1.69E-46 |
| MS.gene04984 | MS.gene36147 | 0.802955 | 4.39E-49 | -1.69E-46 |
| MS.gene050114 | MS.gene36147 | 0.816656 | 4.94E-52 | -1.69E-46 |
| MS.gene050317 | MS.gene36147 | 0.826715 | 2.33E-54 | -1.69E-46 |
| MS.gene051245 | MS.gene36147 | 0.830966 | 2.18E-55 | -1.69E-46 |
| MS.gene051748 | MS.gene36147 | 0.801879 | 7.31E-49 | -1.69E-46 |
| MS.gene051756 | MS.gene36147 | 0.801934 | 7.12E-49 | -1.69E-46 |
| MS.gene053109 | MS.gene36147 | 0.830882 | 2.29E-55 | -1.69E-46 |
| MS.gene054823 | MS.gene36147 | 0.804196 | 2.43E-49 | -1.69E-46 |
| MS.gene055441 | MS.gene36147 | 0.818325 | 2.08E-52 | -1.69E-46 |
| MS.gene056580 | MS.gene36147 | 0.806647 | 7.43E-50 | -1.69E-46 |
| MS.gene057057 | MS.gene36147 | 0.827292 | 1.70E-54 | -1.69E-46 |
| MS.gene057140 | MS.gene36147 | 0.814283 | 1.67E-51 | -1.69E-46 |
| MS.gene057234 | MS.gene36147 | 0.853471 | 2.34E-61 | -1.69E-46 |
| MS.gene057451 | MS.gene36147 | -0.801981 | 6.97E-49 | -1.69E-46 |
| MS.gene057452 | MS.gene36147 | -0.822566 | 2.21E-53 | -1.69E-46 |
| MS.gene058054 | MS.gene36147 | 0.806085 | 9.76E-50 | -1.69E-46 |
| MS.gene058055 | MS.gene36147 | 0.825354 | 4.91E-54 | -1.69E-46 |
| MS.gene058182 | MS.gene36147 | 0.826857 | 2.15E-54 | -1.69E-46 |
| MS.gene058238 | MS.gene36147 | 0.81082 | 9.53E-51 | -1.69E-46 |
| MS.gene058646 | MS.gene36147 | 0.822522 | 2.26E-53 | -1.69E-46 |
| MS.gene058654 | MS.gene36147 | 0.844709 | 6.39E-59 | -1.69E-46 |
| MS.gene058661 | MS.gene36147 | -0.806045 | 9.95E-50 | -1.69E-46 |
| MS.gene058906 | MS.gene36147 | 0.804408 | 2.19E-49 | -1.69E-46 |
| MS.gene060084 | MS.gene36147 | 0.858542 | 7.67E-63 | -1.69E-46 |
| MS.gene060465 | MS.gene36147 | 0.80198 | 6.97E-49 | -1.69E-46 |
| MS.gene060869 | MS.gene36147 | 0.802924 | 4.45E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36147.t1 | MTR_4g094258 | 98.448 | 451 | 6 | 1 | 1 | 450 | 1 | 451 | 0.0 | 917 |
| MS.gene36147.t1 | MTR_4g094258 | 92.018 | 451 | 5 | 2 | 1 | 450 | 1 | 421 | 0.0 | 836 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36147.t1 | AT2G13840 | 62.619 | 420 | 151 | 3 | 31 | 448 | 17 | 432 | 0.0 | 541 |
Find 106 sgRNAs with CRISPR-Local
Find 270 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATCTCTTGTTGATGATTT+TGG | 0.031208 | 4.2:-18933860 | MS.gene36147:CDS |
| CAAACCTTGTAATTGTTTCT+AGG | 0.169257 | 4.2:+18930660 | None:intergenic |
| TTGATCATTGTTTACCTCTT+TGG | 0.224468 | 4.2:-18930583 | MS.gene36147:CDS |
| AAAATCCTGTTGCTATTATT+AGG | 0.255436 | 4.2:-18932103 | MS.gene36147:CDS |
| CACTTCCCAGTTCAGATTCA+TGG | 0.274753 | 4.2:+18930795 | None:intergenic |
| CTATATGGTGCAATGCTATA+AGG | 0.299389 | 4.2:-18930724 | MS.gene36147:CDS |
| CAATGCTATAAGGGAATTAT+TGG | 0.306066 | 4.2:-18930714 | MS.gene36147:CDS |
| GATGACCCATGAACAAGTTT+TGG | 0.306632 | 4.2:-18933939 | MS.gene36147:CDS |
| CGGGCTACATGGAGCCTTCC+GGG | 0.310253 | 4.2:+18932380 | None:intergenic |
| GTAGAATCGGCTCGCAAATA+TGG | 0.314220 | 4.2:-18933100 | MS.gene36147:CDS |
| AAAAGTGATGGAAGGCTTGC+AGG | 0.316738 | 4.2:-18932041 | MS.gene36147:intron |
| TTAAGGTAGCTAGGCCTATA+TGG | 0.320672 | 4.2:-18930739 | MS.gene36147:CDS |
| CTAGAAACAATTACAAGGTT+TGG | 0.330990 | 4.2:-18930659 | MS.gene36147:CDS |
| TGTAACTGAATGGGTTTCAT+TGG | 0.360755 | 4.2:-18933906 | MS.gene36147:CDS |
| TAAAAGCCAAAACTTGTTCA+TGG | 0.361148 | 4.2:+18933933 | None:intergenic |
| TAGAAACAATTACAAGGTTT+GGG | 0.368543 | 4.2:-18930658 | MS.gene36147:CDS |
| TTGCCGTTCTGGCTCATCCA+TGG | 0.379810 | 4.2:-18932133 | MS.gene36147:CDS |
| GAGCATGTTTGTAGGATTGC+AGG | 0.382471 | 4.2:-18932416 | MS.gene36147:CDS |
| TTCCAACGTTTCTACCAGTC+AGG | 0.399060 | 4.2:-18930507 | MS.gene36147:CDS |
| TTAGCATATTACAGCAGTAT+TGG | 0.401822 | 4.2:-18932554 | MS.gene36147:CDS |
| AGGACACCATGAATCTGAAC+TGG | 0.403868 | 4.2:-18930801 | MS.gene36147:CDS |
| GATGAAGTAGCGAAAGAAGA+AGG | 0.406465 | 4.2:+18933878 | None:intergenic |
| AACCTCCTAATAATAGCAAC+AGG | 0.413958 | 4.2:+18932098 | None:intergenic |
| TAATATGCTAAAACGTGAAC+AGG | 0.417023 | 4.2:+18932566 | None:intergenic |
| TTAAATGGGAGCATGTTTGT+AGG | 0.422997 | 4.2:-18932424 | MS.gene36147:CDS |
| TTAAAAGAAGCAGGCCTTCA+TGG | 0.425114 | 4.2:-18932077 | MS.gene36147:CDS |
| CTTATAGCATTGCACCATAT+AGG | 0.426022 | 4.2:+18930725 | None:intergenic |
| CAATTCAAACAAGAGCAATA+AGG | 0.426821 | 4.2:-18934011 | MS.gene36147:CDS |
| GATGGAAAATGAAGAGTTTG+AGG | 0.430917 | 4.2:-18930546 | MS.gene36147:CDS |
| ACGGGCTACATGGAGCCTTC+CGG | 0.436221 | 4.2:+18932379 | None:intergenic |
| CAAATCCTTTCCACAATACA+AGG | 0.438699 | 4.2:+18930607 | None:intergenic |
| TATATGGTGCAATGCTATAA+GGG | 0.441866 | 4.2:-18930723 | MS.gene36147:CDS |
| TTCTAAGTCTCTATGAGAAC+CGG | 0.445315 | 4.2:+18930476 | None:intergenic |
| AAGTCATGCAAAACTAGTAC+TGG | 0.451309 | 4.2:+18930764 | None:intergenic |
| CAACCATAGCACGGGCTACA+TGG | 0.457224 | 4.2:+18932369 | None:intergenic |
| CGAGCCGATTCTACAGCCTC+GGG | 0.458504 | 4.2:+18933109 | None:intergenic |
| GCTCTCTCAACAACCTTAGA+AGG | 0.460070 | 4.2:+18933752 | None:intergenic |
| TCTGACAGATCACGATACTA+TGG | 0.460637 | 4.2:-18933140 | MS.gene36147:CDS |
| TGCCGTTCTGGCTCATCCAT+GGG | 0.473635 | 4.2:-18932132 | MS.gene36147:CDS |
| CATCCCCGAGGCTGTAGAAT+CGG | 0.477174 | 4.2:-18933113 | MS.gene36147:CDS |
| ATGACTTTCTTAAGGTAGCT+AGG | 0.478259 | 4.2:-18930748 | MS.gene36147:CDS |
| ATTAGGAGGTTAAAAGAAGC+AGG | 0.481000 | 4.2:-18932086 | MS.gene36147:CDS |
| TTTATTGCTTCCTCCACCAC+AGG | 0.488429 | 4.2:+18932179 | None:intergenic |
| AACCGGAGTTCCTCCCTGAC+TGG | 0.502354 | 4.2:+18930493 | None:intergenic |
| AAAAGCCAAAACTTGTTCAT+GGG | 0.503915 | 4.2:+18933934 | None:intergenic |
| TAAAACTTACGCCGTTCATG+TGG | 0.507053 | 4.2:+18933729 | None:intergenic |
| CTCAATCCAGTTATGGGAGA+TGG | 0.510681 | 4.2:-18934055 | None:intergenic |
| TTGGTTAAGTAGCCAAGAGA+TGG | 0.514042 | 4.2:-18930564 | MS.gene36147:CDS |
| TATTGGACCATCAAAATTTG+AGG | 0.515732 | 4.2:-18932537 | MS.gene36147:CDS |
| GGGAAGTGAACCTGTGGTGG+AGG | 0.520171 | 4.2:-18932189 | MS.gene36147:CDS |
| ATGAAGTAGCGAAAGAAGAA+GGG | 0.523100 | 4.2:+18933879 | None:intergenic |
| TGTAGACCTCCATCCCATGA+AGG | 0.525586 | 4.2:+18932063 | None:intergenic |
| TAAAAGAAGCAGGCCTTCAT+GGG | 0.526089 | 4.2:-18932076 | MS.gene36147:CDS |
| TTCACCCTTGTATTGTGGAA+AGG | 0.529199 | 4.2:-18930612 | MS.gene36147:CDS |
| ATTGGAGGGTCAGACTATCA+TGG | 0.530154 | 4.2:-18930830 | MS.gene36147:CDS |
| GCGAGCCGATTCTACAGCCT+CGG | 0.530385 | 4.2:+18933108 | None:intergenic |
| GCCCGTGCTATGGTTGAAGC+AGG | 0.533657 | 4.2:-18932362 | MS.gene36147:CDS |
| GCTCCATGTAGCCCGTGCTA+TGG | 0.537065 | 4.2:-18932372 | MS.gene36147:CDS |
| AACGTTGGAAAGCTTCAACT+TGG | 0.537287 | 4.2:+18930520 | None:intergenic |
| CAGGGGAAGTGAACCTGTGG+TGG | 0.538470 | 4.2:-18932192 | MS.gene36147:CDS |
| TACCAGTCAGGGAGGAACTC+CGG | 0.543925 | 4.2:-18930495 | MS.gene36147:CDS |
| AGAAGCAGGCCTTCATGGGA+TGG | 0.546814 | 4.2:-18932072 | MS.gene36147:CDS |
| GGAGGTTCACCCTTGTATTG+TGG | 0.547408 | 4.2:-18930617 | MS.gene36147:CDS |
| AAGAAGAATAAGAACAGAGG+TGG | 0.548356 | 4.2:-18933974 | MS.gene36147:CDS |
| CTAACCTAGAAACAATTACA+AGG | 0.549045 | 4.2:-18930664 | MS.gene36147:CDS |
| GTTAGTATTAGACGGTTCCT+CGG | 0.549211 | 4.2:+18930682 | None:intergenic |
| ATCCTGTTGCTATTATTAGG+AGG | 0.550357 | 4.2:-18932100 | MS.gene36147:CDS |
| GCAGGCAACGGAGTTGCTCC+CGG | 0.551611 | 4.2:-18932398 | MS.gene36147:CDS |
| ATTGTACTAACTTCAACACC+TGG | 0.552254 | 4.2:+18933064 | None:intergenic |
| GTTTCTAGGTTAGTATTAGA+CGG | 0.556827 | 4.2:+18930674 | None:intergenic |
| CAATATTACTTGGAGTAAGC+AGG | 0.557337 | 4.2:+18932287 | None:intergenic |
| GGGTCAGACTATCATGGAAG+AGG | 0.560598 | 4.2:-18930824 | MS.gene36147:CDS |
| AAGAAGAAGAATAAGAACAG+AGG | 0.572930 | 4.2:-18933977 | MS.gene36147:CDS |
| ATGGAGGTCTACAAAAGTGA+TGG | 0.578050 | 4.2:-18932053 | MS.gene36147:CDS |
| TCCCTGACTGGTAGAAACGT+TGG | 0.579843 | 4.2:+18930505 | None:intergenic |
| ACCTGCTTCAACCATAGCAC+GGG | 0.581188 | 4.2:+18932361 | None:intergenic |
| AACCTGCTTCAACCATAGCA+CGG | 0.582016 | 4.2:+18932360 | None:intergenic |
| TTTGGGGTGCAGAAGCCTGT+TGG | 0.583868 | 4.2:-18933842 | MS.gene36147:CDS |
| GTTTGTAGGATTGCAGGCAA+CGG | 0.584225 | 4.2:-18932410 | MS.gene36147:CDS |
| TCCAACGTTTCTACCAGTCA+GGG | 0.584764 | 4.2:-18930506 | MS.gene36147:CDS |
| TATGGCATTAAGATAATCCC+AGG | 0.585730 | 4.2:-18933082 | MS.gene36147:CDS |
| GTTGAGAGAGCCCACATGAA+CGG | 0.586954 | 4.2:-18933740 | MS.gene36147:CDS |
| AGTGACCTGGCTGATGCCTA+CGG | 0.590587 | 4.2:-18930863 | MS.gene36147:CDS |
| TGTCACTCTAAATGCAGTGA+TGG | 0.597504 | 4.2:-18933785 | MS.gene36147:CDS |
| TGCCCATGGATGAGCCAGAA+CGG | 0.598033 | 4.2:+18932130 | None:intergenic |
| ACAGATCACGATACTATGGC+AGG | 0.600390 | 4.2:-18933136 | MS.gene36147:CDS |
| GCAACGGAGTTGCTCCCGGA+AGG | 0.600663 | 4.2:-18932394 | MS.gene36147:CDS |
| AAAGGCCGTAGGCATCAGCC+AGG | 0.611891 | 4.2:+18930858 | None:intergenic |
| AGCAGGCCTTCATGGGATGG+AGG | 0.629146 | 4.2:-18932069 | MS.gene36147:CDS |
| TCAGACTATCATGGAAGAGG+AGG | 0.633037 | 4.2:-18930821 | MS.gene36147:CDS |
| TGGTGGAGACACTGAAGCAG+AGG | 0.633552 | 4.2:-18932591 | MS.gene36147:CDS |
| CATGCAAAACTAGTACTGGA+AGG | 0.634426 | 4.2:+18930768 | None:intergenic |
| ATTATTGGAGTGTTATGCCG+AGG | 0.638655 | 4.2:-18930699 | MS.gene36147:CDS |
| AGGTCTACAAAAGTGATGGA+AGG | 0.642912 | 4.2:-18932049 | MS.gene36147:CDS |
| TTGTACTAACTTCAACACCT+GGG | 0.643477 | 4.2:+18933065 | None:intergenic |
| TCTTGGCTACTTAACCAAAG+AGG | 0.654559 | 4.2:+18930569 | None:intergenic |
| AAAACTTACGCCGTTCATGT+GGG | 0.655200 | 4.2:+18933730 | None:intergenic |
| TTATCTTCGAGCAAAGAACA+TGG | 0.660434 | 4.2:-18932477 | MS.gene36147:CDS |
| TTTCAGGGGAAGTGAACCTG+TGG | 0.661634 | 4.2:-18932195 | MS.gene36147:intron |
| GTATGCAGCATATAGTGACC+TGG | 0.671490 | 4.2:-18930876 | MS.gene36147:intron |
| GGACACCATGAATCTGAACT+GGG | 0.676928 | 4.2:-18930800 | MS.gene36147:CDS |
| AAATCCTTTCCACAATACAA+GGG | 0.689638 | 4.2:+18930608 | None:intergenic |
| TACTATGGCAGGCATCCCCG+AGG | 0.703124 | 4.2:-18933125 | MS.gene36147:CDS |
| AACGTTTCTACCAGTCAGGG+AGG | 0.703221 | 4.2:-18930503 | MS.gene36147:CDS |
| GAGCCGATTCTACAGCCTCG+GGG | 0.740138 | 4.2:+18933110 | None:intergenic |
| AAAATGATTTGTGATACTGG+GGG | 0.788482 | 4.2:-18932158 | MS.gene36147:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTATGGTTATTATTTTATA+AGG | - | chr4.2:18931137-18931156 | MS.gene36147:intron | 10.0% |
| !!! | ATTTTTGTTTGAATTATTTA+AGG | - | chr4.2:18930858-18930877 | MS.gene36147:CDS | 10.0% |
| !! | AATATGTAATGAATATAAGA+AGG | + | chr4.2:18931017-18931036 | None:intergenic | 15.0% |
| !! | TTAATTAGAATCAATTATGA+AGG | - | chr4.2:18931792-18931811 | MS.gene36147:intron | 15.0% |
| !!! | ATTTTTCTTAACTACAAAAA+TGG | + | chr4.2:18932289-18932308 | None:intergenic | 15.0% |
| !!! | ATTTTTGTAGTTAAGAAAAA+TGG | - | chr4.2:18932288-18932307 | MS.gene36147:intron | 15.0% |
| !!! | TACAGTTTTTTTGTTTTATT+TGG | + | chr4.2:18930914-18930933 | None:intergenic | 15.0% |
| !!! | TTTTAAATTTGTAACTGAAT+GGG | - | chr4.2:18930606-18930625 | MS.gene36147:CDS | 15.0% |
| !!! | AATTAACTTGAACTTGAAAT+TGG | + | chr4.2:18931778-18931797 | None:intergenic | 20.0% |
| !!! | ACATAAAAATCGTTATTTTG+CGG | - | chr4.2:18933403-18933422 | MS.gene36147:intron | 20.0% |
| !!! | ATAAAAATGATTTGTGATAC+TGG | - | chr4.2:18932360-18932379 | MS.gene36147:CDS | 20.0% |
| !!! | ATAAGTTTTTGTCAAACATA+AGG | - | chr4.2:18932013-18932032 | MS.gene36147:intron | 20.0% |
| !!! | CTTTTAAATTTGTAACTGAA+TGG | - | chr4.2:18930605-18930624 | MS.gene36147:CDS | 20.0% |
| !!! | GATTTTTATGTTTCCAAAAT+CGG | + | chr4.2:18933394-18933413 | None:intergenic | 20.0% |
| !!! | TAAAAATGATTTGTGATACT+GGG | - | chr4.2:18932361-18932380 | MS.gene36147:CDS | 20.0% |
| !!! | TAAGTTTTTGTCAAACATAA+GGG | - | chr4.2:18932014-18932033 | MS.gene36147:intron | 20.0% |
| !!! | TATTTTGAATGAATCAATTC+TGG | - | chr4.2:18931641-18931660 | MS.gene36147:intron | 20.0% |
| !!! | TTAGTACAATATTTTATCCA+AGG | - | chr4.2:18931470-18931489 | MS.gene36147:intron | 20.0% |
| ! | AAAGCTTAACAAGCTAAAAA+TGG | - | chr4.2:18932071-18932090 | MS.gene36147:CDS | 25.0% |
| ! | AAGCGATAATATTCAATACT+CGG | - | chr4.2:18933278-18933297 | MS.gene36147:intron | 25.0% |
| ! | AATCGTCACTAAACAAAATT+GGG | - | chr4.2:18932854-18932873 | MS.gene36147:intron | 25.0% |
| ! | AGGATAATGAAGTCAATTTA+AGG | - | chr4.2:18931157-18931176 | MS.gene36147:intron | 25.0% |
| ! | ATGCGTTACAATCTAAATTA+CGG | - | chr4.2:18931041-18931060 | MS.gene36147:intron | 25.0% |
| ! | CTTAAGTTTGAAAATTACCT+TGG | + | chr4.2:18931490-18931509 | None:intergenic | 25.0% |
| ! | GGACACATTTACATAAAATT+AGG | - | chr4.2:18931698-18931717 | MS.gene36147:intron | 25.0% |
| ! | GGATGATAATTAGATTTGAT+GGG | - | chr4.2:18933055-18933074 | MS.gene36147:CDS | 25.0% |
| ! | TAATAATTGTATTCAGAGGA+TGG | - | chr4.2:18930966-18930985 | MS.gene36147:intron | 25.0% |
| ! | TAATGAAGTCAATTTAAGGA+TGG | - | chr4.2:18931161-18931180 | MS.gene36147:intron | 25.0% |
| ! | TAGAAACAATTACAAGGTTT+GGG | - | chr4.2:18933863-18933882 | MS.gene36147:CDS | 25.0% |
| ! | TCACTAAATCTTACAATTTG+AGG | + | chr4.2:18932740-18932759 | None:intergenic | 25.0% |
| ! | TCTCATAAAAACCAAAACTA+AGG | - | chr4.2:18932561-18932580 | MS.gene36147:CDS | 25.0% |
| ! | TGGATGATAATTAGATTTGA+TGG | - | chr4.2:18933054-18933073 | MS.gene36147:CDS | 25.0% |
| ! | TGGTTAATAATTGTATTCAG+AGG | - | chr4.2:18930962-18930981 | MS.gene36147:intron | 25.0% |
| !! | AAAAATGATTTGTGATACTG+GGG | - | chr4.2:18932362-18932381 | MS.gene36147:CDS | 25.0% |
| !! | AAAATCCTGTTGCTATTATT+AGG | - | chr4.2:18932418-18932437 | MS.gene36147:CDS | 25.0% |
| !! | AAGAAAACTACCATTTGTTA+TGG | + | chr4.2:18932998-18933017 | None:intergenic | 25.0% |
| !! | ATTGATTTCCTTTGTAGTTT+AGG | - | chr4.2:18931306-18931325 | MS.gene36147:intron | 25.0% |
| !! | CAATTGATTTAGTGTATGTT+TGG | + | chr4.2:18931854-18931873 | None:intergenic | 25.0% |
| !! | TGTGCATCATTTTATGATTA+TGG | - | chr4.2:18931121-18931140 | MS.gene36147:intron | 25.0% |
| !! | TTAAGCATCTTGTATTTTCA+GGG | - | chr4.2:18932311-18932330 | MS.gene36147:CDS | 25.0% |
| !! | TTCCAATGAATTCTAAAAGA+TGG | - | chr4.2:18931253-18931272 | MS.gene36147:intron | 25.0% |
| !!! | AACCATCTTTTAGAATTCAT+TGG | + | chr4.2:18931258-18931277 | None:intergenic | 25.0% |
| !!! | CGATATAATAGTTTTAAACC+TGG | - | chr4.2:18932808-18932827 | MS.gene36147:intron | 25.0% |
| !!! | TGATCTTGCTTGTTAATTTT+TGG | - | chr4.2:18933623-18933642 | MS.gene36147:intron | 25.0% |
| !!! | TTTTGTTTTTTGATTGTCGT+AGG | - | chr4.2:18930822-18930841 | MS.gene36147:CDS | 25.0% |
| AAATCCTTTCCACAATACAA+GGG | + | chr4.2:18933916-18933935 | None:intergenic | 30.0% | |
| AAGAAGAAGAATAAGAACAG+AGG | - | chr4.2:18930544-18930563 | MS.gene36147:CDS | 30.0% | |
| AATATTCAATACTCGGAATC+AGG | - | chr4.2:18933285-18933304 | MS.gene36147:intron | 30.0% | |
| ACTTTGTCAATTGTCATACA+AGG | - | chr4.2:18932591-18932610 | MS.gene36147:CDS | 30.0% | |
| AGAACCAATGGAGAAAAAAA+AGG | + | chr4.2:18931887-18931906 | None:intergenic | 30.0% | |
| AGCTAAAAATGGCTCTTAAA+TGG | - | chr4.2:18932082-18932101 | MS.gene36147:CDS | 30.0% | |
| ATATTCAATACTCGGAATCA+GGG | - | chr4.2:18933286-18933305 | MS.gene36147:intron | 30.0% | |
| ATCGCTTCACTAATATGATT+AGG | + | chr4.2:18933265-18933284 | None:intergenic | 30.0% | |
| CAATCGTCACTAAACAAAAT+TGG | - | chr4.2:18932853-18932872 | MS.gene36147:intron | 30.0% | |
| CAATGCTATAAGGGAATTAT+TGG | - | chr4.2:18933807-18933826 | MS.gene36147:CDS | 30.0% | |
| CAATTCAAACAAGAGCAATA+AGG | - | chr4.2:18930510-18930529 | MS.gene36147:CDS | 30.0% | |
| CAATTCTGGTATAAATGAGT+TGG | - | chr4.2:18931655-18931674 | MS.gene36147:intron | 30.0% | |
| CATAAAAACCAAAACTAAGG+TGG | - | chr4.2:18932564-18932583 | MS.gene36147:CDS | 30.0% | |
| CTAACCTAGAAACAATTACA+AGG | - | chr4.2:18933857-18933876 | MS.gene36147:CDS | 30.0% | |
| CTAGAAACAATTACAAGGTT+TGG | - | chr4.2:18933862-18933881 | MS.gene36147:CDS | 30.0% | |
| GAAAGTTAACTGTATTGTAG+AGG | - | chr4.2:18931195-18931214 | MS.gene36147:intron | 30.0% | |
| GCTAAAAATGGCTCTTAAAT+GGG | - | chr4.2:18932083-18932102 | MS.gene36147:CDS | 30.0% | |
| TAATATGCTAAAACGTGAAC+AGG | + | chr4.2:18931958-18931977 | None:intergenic | 30.0% | |
| TATATGGTGCAATGCTATAA+GGG | - | chr4.2:18933798-18933817 | MS.gene36147:CDS | 30.0% | |
| TATTGGACCATCAAAATTTG+AGG | - | chr4.2:18931984-18932003 | MS.gene36147:intron | 30.0% | |
| TGTGATGTTATCAAATCATC+AGG | - | chr4.2:18932685-18932704 | MS.gene36147:intron | 30.0% | |
| TGTTACCATTTGTTCATAAC+AGG | - | chr4.2:18931345-18931364 | MS.gene36147:intron | 30.0% | |
| TGTTGTCACAATTGTGTAAT+AGG | - | chr4.2:18933556-18933575 | MS.gene36147:intron | 30.0% | |
| TTAGCATATTACAGCAGTAT+TGG | - | chr4.2:18931967-18931986 | MS.gene36147:intron | 30.0% | |
| TTGATCATTGTTTACCTCTT+TGG | - | chr4.2:18933938-18933957 | MS.gene36147:CDS | 30.0% | |
| TTTCACCTGTTATGAACAAA+TGG | + | chr4.2:18931353-18931372 | None:intergenic | 30.0% | |
| TTTGATATTGCAATGAAACG+TGG | - | chr4.2:18933353-18933372 | MS.gene36147:intron | 30.0% | |
| ! | AAAAGCCAAAACTTGTTCAT+GGG | + | chr4.2:18930590-18930609 | None:intergenic | 30.0% |
| ! | AAAATGATTTGTGATACTGG+GGG | - | chr4.2:18932363-18932382 | MS.gene36147:CDS | 30.0% |
| ! | AGTTTTGCATGACTTTCTTA+AGG | - | chr4.2:18933765-18933784 | MS.gene36147:CDS | 30.0% |
| ! | CAAACCTTGTAATTGTTTCT+AGG | + | chr4.2:18933864-18933883 | None:intergenic | 30.0% |
| ! | GTTAAGCATCTTGTATTTTC+AGG | - | chr4.2:18932310-18932329 | MS.gene36147:CDS | 30.0% |
| ! | GTTTCTAGGTTAGTATTAGA+CGG | + | chr4.2:18933850-18933869 | None:intergenic | 30.0% |
| ! | TAAAAGCCAAAACTTGTTCA+TGG | + | chr4.2:18930591-18930610 | None:intergenic | 30.0% |
| ! | TAAATGAGTTGGATGTAATG+TGG | - | chr4.2:18931666-18931685 | MS.gene36147:intron | 30.0% |
| ! | TAAGCATCTTGTATTTTCAG+GGG | - | chr4.2:18932312-18932331 | MS.gene36147:CDS | 30.0% |
| ! | TAGGTTGAACGATAAATTTG+AGG | - | chr4.2:18931717-18931736 | MS.gene36147:intron | 30.0% |
| ! | TTCTAAAAGATGGTTGTCTA+AGG | - | chr4.2:18931263-18931282 | MS.gene36147:intron | 30.0% |
| ! | TTGATGCTTGTTGATTGAAT+TGG | - | chr4.2:18931514-18931533 | MS.gene36147:intron | 30.0% |
| ! | TTTTTGTCAAACATAAGGGA+CGG | - | chr4.2:18932018-18932037 | MS.gene36147:intron | 30.0% |
| !!! | AAGTCCTTTTTTTTCTCCAT+TGG | - | chr4.2:18931880-18931899 | MS.gene36147:intron | 30.0% |
| !!! | ATCTCTTGTTGATGATTTTG+GGG | - | chr4.2:18930663-18930682 | MS.gene36147:CDS | 30.0% |
| !!! | CATCTCTTGTTGATGATTTT+GGG | - | chr4.2:18930662-18930681 | MS.gene36147:CDS | 30.0% |
| !!! | TCATCTCTTGTTGATGATTT+TGG | - | chr4.2:18930661-18930680 | MS.gene36147:CDS | 30.0% |
| AAAACGAGCCTAAACTACAA+AGG | + | chr4.2:18931317-18931336 | None:intergenic | 35.0% | |
| AAAATCGGATGTTACTGCAT+TGG | + | chr4.2:18933379-18933398 | None:intergenic | 35.0% | |
| AACCTCCTAATAATAGCAAC+AGG | + | chr4.2:18932426-18932445 | None:intergenic | 35.0% | |
| AAGAAGAATAAGAACAGAGG+TGG | - | chr4.2:18930547-18930566 | MS.gene36147:CDS | 35.0% | |
| AAGTCAATTTAAGGATGGTG+TGG | - | chr4.2:18931166-18931185 | MS.gene36147:intron | 35.0% | |
| AAGTCATGCAAAACTAGTAC+TGG | + | chr4.2:18933760-18933779 | None:intergenic | 35.0% | |
| AGCTTGAACACTTAAAACTG+TGG | - | chr4.2:18930942-18930961 | MS.gene36147:intron | 35.0% | |
| AGGCTGAAATTCAATTGTAG+AGG | - | chr4.2:18931737-18931756 | MS.gene36147:intron | 35.0% | |
| ATAACAAGTGAAGTGATGCA+TGG | - | chr4.2:18932781-18932800 | MS.gene36147:intron | 35.0% | |
| ATCAAAAAGATATCGGGCAA+AGG | + | chr4.2:18932208-18932227 | None:intergenic | 35.0% | |
| ATCATCCAATGTCCACAAAA+AGG | + | chr4.2:18933042-18933061 | None:intergenic | 35.0% | |
| ATCTAGCAATCAACAAGTGA+AGG | + | chr4.2:18932265-18932284 | None:intergenic | 35.0% | |
| ATGAAGTAGCGAAAGAAGAA+GGG | + | chr4.2:18930645-18930664 | None:intergenic | 35.0% | |
| ATGACTTTCTTAAGGTAGCT+AGG | - | chr4.2:18933773-18933792 | MS.gene36147:CDS | 35.0% | |
| ATTAGGAGGTTAAAAGAAGC+AGG | - | chr4.2:18932435-18932454 | MS.gene36147:CDS | 35.0% | |
| ATTGTACTAACTTCAACACC+TGG | + | chr4.2:18931460-18931479 | None:intergenic | 35.0% | |
| CAAATCCTTTCCACAATACA+AGG | + | chr4.2:18933917-18933936 | None:intergenic | 35.0% | |
| CAATATTACTTGGAGTAAGC+AGG | + | chr4.2:18932237-18932256 | None:intergenic | 35.0% | |
| CTATATGGTGCAATGCTATA+AGG | - | chr4.2:18933797-18933816 | MS.gene36147:CDS | 35.0% | |
| CTTATAGCATTGCACCATAT+AGG | + | chr4.2:18933799-18933818 | None:intergenic | 35.0% | |
| CTTCATACAGTCTCTTTATG+TGG | + | chr4.2:18933141-18933160 | None:intergenic | 35.0% | |
| GATGGAAAATGAAGAGTTTG+AGG | - | chr4.2:18933975-18933994 | MS.gene36147:CDS | 35.0% | |
| GATGTAATGTGGTTTATGTC+TGG | - | chr4.2:18931677-18931696 | MS.gene36147:intron | 35.0% | |
| GCACATATTTCAAAGAGTTG+TGG | + | chr4.2:18931106-18931125 | None:intergenic | 35.0% | |
| GTCCACCATCAAAAAGATAT+CGG | + | chr4.2:18932215-18932234 | None:intergenic | 35.0% | |
| TAATTGTCCAAGTGCATGTT+TGG | - | chr4.2:18931599-18931618 | MS.gene36147:intron | 35.0% | |
| TATGGCATTAAGATAATCCC+AGG | - | chr4.2:18931439-18931458 | MS.gene36147:intron | 35.0% | |
| TCCACCATCAAAAAGATATC+GGG | + | chr4.2:18932214-18932233 | None:intergenic | 35.0% | |
| TCTGTGTCTTCCATAACAAA+TGG | - | chr4.2:18932985-18933004 | MS.gene36147:intron | 35.0% | |
| TGTTCGTTTATGACTAGACA+TGG | + | chr4.2:18933480-18933499 | None:intergenic | 35.0% | |
| TTATCTTCGAGCAAAGAACA+TGG | - | chr4.2:18932044-18932063 | MS.gene36147:CDS | 35.0% | |
| TTGTACTAACTTCAACACCT+GGG | + | chr4.2:18931459-18931478 | None:intergenic | 35.0% | |
| ! | AAGTAGATCCACCTTAGTTT+TGG | + | chr4.2:18932575-18932594 | None:intergenic | 35.0% |
| ! | AATGCAGTAACATCCGATTT+TGG | - | chr4.2:18933378-18933397 | MS.gene36147:intron | 35.0% |
| ! | ACTCTTCATTTTCCATCTCT+TGG | + | chr4.2:18933972-18933991 | None:intergenic | 35.0% |
| ! | ATCCTGTTGCTATTATTAGG+AGG | - | chr4.2:18932421-18932440 | MS.gene36147:CDS | 35.0% |
| ! | GGTTATTACGTAAGTGTTGT+GGG | + | chr4.2:18932943-18932962 | None:intergenic | 35.0% |
| ! | TGGTTATTACGTAAGTGTTG+TGG | + | chr4.2:18932944-18932963 | None:intergenic | 35.0% |
| ! | TGTAACTGAATGGGTTTCAT+TGG | - | chr4.2:18930615-18930634 | MS.gene36147:CDS | 35.0% |
| ! | TGTTGATTGAATTGGCACTT+TGG | - | chr4.2:18931522-18931541 | MS.gene36147:intron | 35.0% |
| ! | TTAAATGGGAGCATGTTTGT+AGG | - | chr4.2:18932097-18932116 | MS.gene36147:CDS | 35.0% |
| ! | TTTGCCCGATATCTTTTTGA+TGG | - | chr4.2:18932207-18932226 | MS.gene36147:intron | 35.0% |
| !! | TAAGCTGTTTTGTCATTTCC+AGG | + | chr4.2:18932829-18932848 | None:intergenic | 35.0% |
| !! | TCTAGCTCCTCAAATTTTGA+TGG | + | chr4.2:18931994-18932013 | None:intergenic | 35.0% |
| !!! | ACAGGATTTTTTAATGCCCA+TGG | + | chr4.2:18932408-18932427 | None:intergenic | 35.0% |
| !!! | ATGTTTGGTTCCACTTTTTG+AGG | + | chr4.2:18931839-18931858 | None:intergenic | 35.0% |
| !!! | TCCATCTCCACTTATTTTAG+AGG | + | chr4.2:18931221-18931240 | None:intergenic | 35.0% |
| !!! | TCGGAATCAGGGTTTTAAAT+GGG | - | chr4.2:18933297-18933316 | MS.gene36147:intron | 35.0% |
| AAAACTTACGCCGTTCATGT+GGG | + | chr4.2:18930794-18930813 | None:intergenic | 40.0% | |
| AAAGAGACTGTATGAAGCCT+AGG | - | chr4.2:18933144-18933163 | MS.gene36147:CDS | 40.0% | |
| AACGTTGGAAAGCTTCAACT+TGG | + | chr4.2:18934004-18934023 | None:intergenic | 40.0% | |
| ACAACACAATGAGACGTAGT+AGG | + | chr4.2:18933542-18933561 | None:intergenic | 40.0% | |
| ATATCAAAGATCGCGACACA+AGG | + | chr4.2:18933341-18933360 | None:intergenic | 40.0% | |
| ATCATGGGATGAATAGCAGA+TGG | + | chr4.2:18933228-18933247 | None:intergenic | 40.0% | |
| ATCCAATGTCCACAAAAAGG+TGG | + | chr4.2:18933039-18933058 | None:intergenic | 40.0% | |
| ATGGAGGTCTACAAAAGTGA+TGG | - | chr4.2:18932468-18932487 | MS.gene36147:CDS | 40.0% | |
| CAGAAGCCTGTTGGAAAAAA+TGG | - | chr4.2:18930688-18930707 | MS.gene36147:CDS | 40.0% | |
| CTACTTACCTCCTCAAAAAG+TGG | - | chr4.2:18931826-18931845 | MS.gene36147:intron | 40.0% | |
| CTGCTATTCATCCCATGATA+TGG | - | chr4.2:18933229-18933248 | MS.gene36147:intron | 40.0% | |
| GAAGGCAACGCAATATTACT+TGG | + | chr4.2:18932247-18932266 | None:intergenic | 40.0% | |
| GATGAAGTAGCGAAAGAAGA+AGG | + | chr4.2:18930646-18930665 | None:intergenic | 40.0% | |
| GGAAGACACAGAATAATGAC+TGG | + | chr4.2:18932977-18932996 | None:intergenic | 40.0% | |
| GTCTCTTTATGTGGATCAGA+AGG | + | chr4.2:18933132-18933151 | None:intergenic | 40.0% | |
| GTGAACCTCCCTTAAAAATG+CGG | + | chr4.2:18933894-18933913 | None:intergenic | 40.0% | |
| GTTAGTATTAGACGGTTCCT+CGG | + | chr4.2:18933842-18933861 | None:intergenic | 40.0% | |
| TAAAACTTACGCCGTTCATG+TGG | + | chr4.2:18930795-18930814 | None:intergenic | 40.0% | |
| TAAAAGAAGCAGGCCTTCAT+GGG | - | chr4.2:18932445-18932464 | MS.gene36147:CDS | 40.0% | |
| TAATGACTGGTGCATTCACT+TGG | + | chr4.2:18932964-18932983 | None:intergenic | 40.0% | |
| TATCAAAGATCGCGACACAA+GGG | + | chr4.2:18933340-18933359 | None:intergenic | 40.0% | |
| TATGATCAACCACTAAGCCT+AGG | + | chr4.2:18933164-18933183 | None:intergenic | 40.0% | |
| TCCAATGTCCACAAAAAGGT+GGG | + | chr4.2:18933038-18933057 | None:intergenic | 40.0% | |
| TCTGACAGATCACGATACTA+TGG | - | chr4.2:18931381-18931400 | MS.gene36147:intron | 40.0% | |
| TCTTGGCTACTTAACCAAAG+AGG | + | chr4.2:18933955-18933974 | None:intergenic | 40.0% | |
| TGAACCTCCCTTAAAAATGC+GGG | + | chr4.2:18933893-18933912 | None:intergenic | 40.0% | |
| TGTAGAACCAAACATGCACT+TGG | + | chr4.2:18931609-18931628 | None:intergenic | 40.0% | |
| TGTCACTCTAAATGCAGTGA+TGG | - | chr4.2:18930736-18930755 | MS.gene36147:CDS | 40.0% | |
| TTAAAAGAAGCAGGCCTTCA+TGG | - | chr4.2:18932444-18932463 | MS.gene36147:CDS | 40.0% | |
| TTAAGGTAGCTAGGCCTATA+TGG | - | chr4.2:18933782-18933801 | MS.gene36147:CDS | 40.0% | |
| TTCACCCTTGTATTGTGGAA+AGG | - | chr4.2:18933909-18933928 | MS.gene36147:CDS | 40.0% | |
| TTGGTTAAGTAGCCAAGAGA+TGG | - | chr4.2:18933957-18933976 | MS.gene36147:CDS | 40.0% | |
| ! | AGGTCTACAAAAGTGATGGA+AGG | - | chr4.2:18932472-18932491 | MS.gene36147:CDS | 40.0% |
| ! | ATTATTGGAGTGTTATGCCG+AGG | - | chr4.2:18933822-18933841 | MS.gene36147:CDS | 40.0% |
| ! | CATGCAAAACTAGTACTGGA+AGG | + | chr4.2:18933756-18933775 | None:intergenic | 40.0% |
| ! | CTGACCCTCCAATTTTCAAA+AGG | + | chr4.2:18933684-18933703 | None:intergenic | 40.0% |
| ! | GATGACCCATGAACAAGTTT+TGG | - | chr4.2:18930582-18930601 | MS.gene36147:CDS | 40.0% |
| ! | TCCAATTTTCAAAAGGCCGT+AGG | + | chr4.2:18933677-18933696 | None:intergenic | 40.0% |
| ! | TGGCTTTTTGTCTCCTTCTA+AGG | - | chr4.2:18930756-18930775 | MS.gene36147:CDS | 40.0% |
| !! | AAGTGCATGTTTGGTTCTAC+AGG | - | chr4.2:18931608-18931627 | MS.gene36147:intron | 40.0% |
| !! | ACGGCCTTTTGAAAATTGGA+GGG | - | chr4.2:18933677-18933696 | MS.gene36147:intron | 40.0% |
| !! | AGTGCATGTTTGGTTCTACA+GGG | - | chr4.2:18931609-18931628 | MS.gene36147:intron | 40.0% |
| !! | GCAAGAAGCATCCATATCAT+GGG | + | chr4.2:18933243-18933262 | None:intergenic | 40.0% |
| !! | GCCTCTAAAATAAGTGGAGA+TGG | - | chr4.2:18931217-18931236 | MS.gene36147:intron | 40.0% |
| !! | GTAGAGGCCTCTAAAATAAG+TGG | - | chr4.2:18931211-18931230 | MS.gene36147:intron | 40.0% |
| !! | TACGGCCTTTTGAAAATTGG+AGG | - | chr4.2:18933676-18933695 | MS.gene36147:intron | 40.0% |
| !!! | CGGAATCAGGGTTTTAAATG+GGG | - | chr4.2:18933298-18933317 | MS.gene36147:intron | 40.0% |
| !!! | CTCGGAATCAGGGTTTTAAA+TGG | - | chr4.2:18933296-18933315 | MS.gene36147:intron | 40.0% |
| !!! | CTGTCACCATTTTTTCCAAC+AGG | + | chr4.2:18930697-18930716 | None:intergenic | 40.0% |
| !!! | GGAATCAGGGTTTTAAATGG+GGG | - | chr4.2:18933299-18933318 | MS.gene36147:intron | 40.0% |
| !!! | TTTGGTTCCACTTTTTGAGG+AGG | + | chr4.2:18931836-18931855 | None:intergenic | 40.0% |
| AACCTGCTTCAACCATAGCA+CGG | + | chr4.2:18932164-18932183 | None:intergenic | 45.0% | |
| ACAGATCACGATACTATGGC+AGG | - | chr4.2:18931385-18931404 | MS.gene36147:intron | 45.0% | |
| AGGACACCATGAATCTGAAC+TGG | - | chr4.2:18933720-18933739 | MS.gene36147:intron | 45.0% | |
| ATTGGAGGGTCAGACTATCA+TGG | - | chr4.2:18933691-18933710 | MS.gene36147:intron | 45.0% | |
| CACTTCCCAGTTCAGATTCA+TGG | + | chr4.2:18933729-18933748 | None:intergenic | 45.0% | |
| CCAATGTCCACAAAAAGGTG+GGG | + | chr4.2:18933037-18933056 | None:intergenic | 45.0% | |
| CTTGTGTTGCCTCTAACTAG+AGG | - | chr4.2:18931549-18931568 | MS.gene36147:intron | 45.0% | |
| GAGACGTAGTAGGCAGTATT+CGG | + | chr4.2:18933532-18933551 | None:intergenic | 45.0% | |
| GAGCATGTTTGTAGGATTGC+AGG | - | chr4.2:18932105-18932124 | MS.gene36147:CDS | 45.0% | |
| GCTCTCTCAACAACCTTAGA+AGG | + | chr4.2:18930772-18930791 | None:intergenic | 45.0% | |
| GGACACCATGAATCTGAACT+GGG | - | chr4.2:18933721-18933740 | MS.gene36147:intron | 45.0% | |
| GTATGCAGCATATAGTGACC+TGG | - | chr4.2:18933645-18933664 | MS.gene36147:intron | 45.0% | |
| GTTTGTAGGATTGCAGGCAA+CGG | - | chr4.2:18932111-18932130 | MS.gene36147:CDS | 45.0% | |
| TCAGACTATCATGGAAGAGG+AGG | - | chr4.2:18933700-18933719 | MS.gene36147:intron | 45.0% | |
| TCCAACGTTTCTACCAGTCA+GGG | - | chr4.2:18934015-18934034 | MS.gene36147:CDS | 45.0% | |
| TCTGATGTTTGCCCATCTAC+TGG | - | chr4.2:18931904-18931923 | MS.gene36147:intron | 45.0% | |
| TGGGCAAACATCAGAACCAA+TGG | + | chr4.2:18931899-18931918 | None:intergenic | 45.0% | |
| TGTATGAAGCCTAGGCTTAG+TGG | - | chr4.2:18933152-18933171 | MS.gene36147:CDS | 45.0% | |
| TGTTGCCTCTAACTAGAGGA+GGG | - | chr4.2:18931553-18931572 | MS.gene36147:intron | 45.0% | |
| TTCCAACGTTTCTACCAGTC+AGG | - | chr4.2:18934014-18934033 | MS.gene36147:CDS | 45.0% | |
| TTTAAGGATGGTGTGGCTGA+TGG | - | chr4.2:18931173-18931192 | MS.gene36147:intron | 45.0% | |
| TTTATTGCTTCCTCCACCAC+AGG | + | chr4.2:18932345-18932364 | None:intergenic | 45.0% | |
| ! | AAAAGTGATGGAAGGCTTGC+AGG | - | chr4.2:18932480-18932499 | MS.gene36147:CDS | 45.0% |
| ! | GCCCGATATCTTTTTGATGG+TGG | - | chr4.2:18932210-18932229 | MS.gene36147:intron | 45.0% |
| ! | GGGAGAACCCGCATTTTTAA+GGG | - | chr4.2:18933883-18933902 | MS.gene36147:CDS | 45.0% |
| ! | TGGGAGAACCCGCATTTTTA+AGG | - | chr4.2:18933882-18933901 | MS.gene36147:CDS | 45.0% |
| !! | AGAACCCGCATTTTTAAGGG+AGG | - | chr4.2:18933886-18933905 | MS.gene36147:CDS | 45.0% |
| !! | ATGGTTAGCCTCTATCTCAC+CGG | + | chr4.2:18933461-18933480 | None:intergenic | 45.0% |
| !! | GCCTACGGCCTTTTGAAAAT+TGG | - | chr4.2:18933673-18933692 | MS.gene36147:intron | 45.0% |
| !! | GGCAAGAAGCATCCATATCA+TGG | + | chr4.2:18933244-18933263 | None:intergenic | 45.0% |
| !! | GTAGAATCGGCTCGCAAATA+TGG | - | chr4.2:18931421-18931440 | MS.gene36147:intron | 45.0% |
| AACGTTTCTACCAGTCAGGG+AGG | - | chr4.2:18934018-18934037 | MS.gene36147:CDS | 50.0% | |
| ACCTGCTTCAACCATAGCAC+GGG | + | chr4.2:18932163-18932182 | None:intergenic | 50.0% | |
| ACTCATCACTACCGCCAACT+TGG | - | chr4.2:18933430-18933449 | MS.gene36147:intron | 50.0% | |
| CTCATCACTACCGCCAACTT+GGG | - | chr4.2:18933431-18933450 | MS.gene36147:intron | 50.0% | |
| GGAGGTTCACCCTTGTATTG+TGG | - | chr4.2:18933904-18933923 | MS.gene36147:CDS | 50.0% | |
| GGGTCAGACTATCATGGAAG+AGG | - | chr4.2:18933697-18933716 | MS.gene36147:intron | 50.0% | |
| GTGTTGCCTCTAACTAGAGG+AGG | - | chr4.2:18931552-18931571 | MS.gene36147:intron | 50.0% | |
| GTTGAGAGAGCCCACATGAA+CGG | - | chr4.2:18930781-18930800 | MS.gene36147:CDS | 50.0% | |
| GTTGCCTCTAACTAGAGGAG+GGG | - | chr4.2:18931554-18931573 | MS.gene36147:intron | 50.0% | |
| TCCCTGACTGGTAGAAACGT+TGG | + | chr4.2:18934019-18934038 | None:intergenic | 50.0% | |
| TGTAGACCTCCATCCCATGA+AGG | + | chr4.2:18932461-18932480 | None:intergenic | 50.0% | |
| TTGCCTCTAACTAGAGGAGG+GGG | - | chr4.2:18931555-18931574 | MS.gene36147:intron | 50.0% | |
| TTTCAGGGGAAGTGAACCTG+TGG | - | chr4.2:18932326-18932345 | MS.gene36147:CDS | 50.0% | |
| ! | CCCCACCTTTTTGTGGACAT+TGG | - | chr4.2:18933034-18933053 | MS.gene36147:intron | 50.0% |
| ! | TGCACTACCCCACCTTTTTG+TGG | - | chr4.2:18933027-18933046 | MS.gene36147:intron | 50.0% |
| AGAAGCAGGCCTTCATGGGA+TGG | - | chr4.2:18932449-18932468 | MS.gene36147:CDS | 55.0% | |
| AGTGACCTGGCTGATGCCTA+CGG | - | chr4.2:18933658-18933677 | MS.gene36147:intron | 55.0% | |
| CATCCCCGAGGCTGTAGAAT+CGG | - | chr4.2:18931408-18931427 | MS.gene36147:intron | 55.0% | |
| CTCCACCACTGCCAGTAGAT+GGG | + | chr4.2:18931918-18931937 | None:intergenic | 55.0% | |
| GTTTGCCCATCTACTGGCAG+TGG | - | chr4.2:18931910-18931929 | MS.gene36147:intron | 55.0% | |
| TACCAGTCAGGGAGGAACTC+CGG | - | chr4.2:18934026-18934045 | MS.gene36147:CDS | 55.0% | |
| TCTCCACCACTGCCAGTAGA+TGG | + | chr4.2:18931919-18931938 | None:intergenic | 55.0% | |
| TGCCCATGGATGAGCCAGAA+CGG | + | chr4.2:18932394-18932413 | None:intergenic | 55.0% | |
| TGCCTCTAACTAGAGGAGGG+GGG | - | chr4.2:18931556-18931575 | MS.gene36147:intron | 55.0% | |
| TGGTGGAGACACTGAAGCAG+AGG | - | chr4.2:18931930-18931949 | MS.gene36147:intron | 55.0% | |
| TTCCCCCCTCCTCTAGTTAG+AGG | + | chr4.2:18931561-18931580 | None:intergenic | 55.0% | |
| ! | CAACCATAGCACGGGCTACA+TGG | + | chr4.2:18932155-18932174 | None:intergenic | 55.0% |
| ! | TTTGGGGTGCAGAAGCCTGT+TGG | - | chr4.2:18930679-18930698 | MS.gene36147:CDS | 55.0% |
| !! | TGCCGTTCTGGCTCATCCAT+GGG | - | chr4.2:18932389-18932408 | MS.gene36147:CDS | 55.0% |
| !! | TTGCCGTTCTGGCTCATCCA+TGG | - | chr4.2:18932388-18932407 | MS.gene36147:CDS | 55.0% |
| AAAGGCCGTAGGCATCAGCC+AGG | + | chr4.2:18933666-18933685 | None:intergenic | 60.0% | |
| AACCGGAGTTCCTCCCTGAC+TGG | + | chr4.2:18934031-18934050 | None:intergenic | 60.0% | |
| AGCAGGCCTTCATGGGATGG+AGG | - | chr4.2:18932452-18932471 | MS.gene36147:CDS | 60.0% | |
| CAGGGGAAGTGAACCTGTGG+TGG | - | chr4.2:18932329-18932348 | MS.gene36147:CDS | 60.0% | |
| GCCCGTGCTATGGTTGAAGC+AGG | - | chr4.2:18932159-18932178 | MS.gene36147:CDS | 60.0% | |
| GCTCCATGTAGCCCGTGCTA+TGG | - | chr4.2:18932149-18932168 | MS.gene36147:CDS | 60.0% | |
| GGGAAGTGAACCTGTGGTGG+AGG | - | chr4.2:18932332-18932351 | MS.gene36147:CDS | 60.0% | |
| TACTATGGCAGGCATCCCCG+AGG | - | chr4.2:18931396-18931415 | MS.gene36147:intron | 60.0% | |
| TGCCCATCTACTGGCAGTGG+TGG | - | chr4.2:18931913-18931932 | MS.gene36147:intron | 60.0% | |
| ! | ACGGGCTACATGGAGCCTTC+CGG | + | chr4.2:18932145-18932164 | None:intergenic | 60.0% |
| ! | CGAGCCGATTCTACAGCCTC+GGG | + | chr4.2:18931415-18931434 | None:intergenic | 60.0% |
| ! | GAGCCGATTCTACAGCCTCG+GGG | + | chr4.2:18931414-18931433 | None:intergenic | 60.0% |
| ! | GCGAGCCGATTCTACAGCCT+CGG | + | chr4.2:18931416-18931435 | None:intergenic | 60.0% |
| ! | TCTCACCGGCTAGCCCAAGT+TGG | + | chr4.2:18933447-18933466 | None:intergenic | 60.0% |
| !! | TACCGCCAACTTGGGCTAGC+CGG | - | chr4.2:18933439-18933458 | MS.gene36147:intron | 60.0% |
| !! | TACTGGGGGTGTTGCCGTTC+TGG | - | chr4.2:18932377-18932396 | MS.gene36147:CDS | 60.0% |
| !! | TGGGCTAGCCGGTGAGATAG+AGG | - | chr4.2:18933450-18933469 | MS.gene36147:intron | 60.0% |
| CGGGCTACATGGAGCCTTCC+GGG | + | chr4.2:18932144-18932163 | None:intergenic | 65.0% | |
| GCAACGGAGTTGCTCCCGGA+AGG | - | chr4.2:18932127-18932146 | MS.gene36147:CDS | 65.0% | |
| GCAGGCAACGGAGTTGCTCC+CGG | - | chr4.2:18932123-18932142 | MS.gene36147:CDS | 65.0% | |
| ! | CACCGGCTAGCCCAAGTTGG+CGG | + | chr4.2:18933444-18933463 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 18930478 | 18934065 | 18930478 | ID=MS.gene36147 |
| chr4.2 | mRNA | 18930478 | 18934065 | 18930478 | ID=MS.gene36147.t1;Parent=MS.gene36147 |
| chr4.2 | exon | 18933739 | 18934065 | 18933739 | ID=MS.gene36147.t1.exon1;Parent=MS.gene36147.t1 |
| chr4.2 | CDS | 18933739 | 18934065 | 18933739 | ID=cds.MS.gene36147.t1;Parent=MS.gene36147.t1 |
| chr4.2 | exon | 18933052 | 18933176 | 18933052 | ID=MS.gene36147.t1.exon2;Parent=MS.gene36147.t1 |
| chr4.2 | CDS | 18933052 | 18933176 | 18933052 | ID=cds.MS.gene36147.t1;Parent=MS.gene36147.t1 |
| chr4.2 | exon | 18932296 | 18932613 | 18932296 | ID=MS.gene36147.t1.exon3;Parent=MS.gene36147.t1 |
| chr4.2 | CDS | 18932296 | 18932613 | 18932296 | ID=cds.MS.gene36147.t1;Parent=MS.gene36147.t1 |
| chr4.2 | exon | 18932042 | 18932211 | 18932042 | ID=MS.gene36147.t1.exon4;Parent=MS.gene36147.t1 |
| chr4.2 | CDS | 18932042 | 18932211 | 18932042 | ID=cds.MS.gene36147.t1;Parent=MS.gene36147.t1 |
| chr4.2 | exon | 18930478 | 18930890 | 18930478 | ID=MS.gene36147.t1.exon5;Parent=MS.gene36147.t1 |
| chr4.2 | CDS | 18930478 | 18930890 | 18930478 | ID=cds.MS.gene36147.t1;Parent=MS.gene36147.t1 |
| Gene Sequence |
| Protein sequence |
