Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36741.t1 | XP_003627048.1 | 98.4 | 494 | 8 | 0 | 1 | 494 | 1 | 494 | 2.00E-276 | 961.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36741.t1 | Q9SEK2 | 72.7 | 494 | 134 | 1 | 1 | 493 | 1 | 494 | 7.5e-211 | 734.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36741.t1 | G7LGP4 | 98.4 | 494 | 8 | 0 | 1 | 494 | 1 | 494 | 1.5e-276 | 961.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene36741 | 0.811165 | 8.02E-51 | -1.69E-46 |
| MS.gene049821 | MS.gene36741 | 0.838555 | 2.68E-57 | -1.69E-46 |
| MS.gene049850 | MS.gene36741 | 0.81752 | 3.16E-52 | -1.69E-46 |
| MS.gene050020 | MS.gene36741 | 0.804173 | 2.45E-49 | -1.69E-46 |
| MS.gene050273 | MS.gene36741 | 0.805937 | 1.05E-49 | -1.69E-46 |
| MS.gene050442 | MS.gene36741 | 0.808534 | 2.95E-50 | -1.69E-46 |
| MS.gene050689 | MS.gene36741 | 0.800353 | 1.50E-48 | -1.69E-46 |
| MS.gene050759 | MS.gene36741 | 0.827649 | 1.39E-54 | -1.69E-46 |
| MS.gene050807 | MS.gene36741 | 0.809038 | 2.31E-50 | -1.69E-46 |
| MS.gene050808 | MS.gene36741 | 0.801338 | 9.44E-49 | -1.69E-46 |
| MS.gene050962 | MS.gene36741 | 0.820414 | 6.94E-53 | -1.69E-46 |
| MS.gene051247 | MS.gene36741 | 0.803219 | 3.87E-49 | -1.69E-46 |
| MS.gene051328 | MS.gene36741 | 0.810218 | 1.29E-50 | -1.69E-46 |
| MS.gene051719 | MS.gene36741 | 0.810259 | 1.26E-50 | -1.69E-46 |
| MS.gene051720 | MS.gene36741 | 0.808371 | 3.20E-50 | -1.69E-46 |
| MS.gene051744 | MS.gene36741 | 0.80489 | 1.74E-49 | -1.69E-46 |
| MS.gene052133 | MS.gene36741 | 0.817239 | 3.66E-52 | -1.69E-46 |
| MS.gene052335 | MS.gene36741 | 0.81272 | 3.68E-51 | -1.69E-46 |
| MS.gene052463 | MS.gene36741 | 0.811041 | 8.53E-51 | -1.69E-46 |
| MS.gene052516 | MS.gene36741 | 0.82532 | 5.00E-54 | -1.69E-46 |
| MS.gene052665 | MS.gene36741 | 0.800866 | 1.18E-48 | -1.69E-46 |
| MS.gene053079 | MS.gene36741 | 0.810255 | 1.26E-50 | -1.69E-46 |
| MS.gene053226 | MS.gene36741 | 0.807049 | 6.11E-50 | -1.69E-46 |
| MS.gene053581 | MS.gene36741 | 0.812908 | 3.35E-51 | -1.69E-46 |
| MS.gene05414 | MS.gene36741 | 0.814038 | 1.89E-51 | -1.69E-46 |
| MS.gene05415 | MS.gene36741 | 0.831992 | 1.22E-55 | -1.69E-46 |
| MS.gene05423 | MS.gene36741 | 0.810981 | 8.80E-51 | -1.69E-46 |
| MS.gene05462 | MS.gene36741 | 0.8101 | 1.36E-50 | -1.69E-46 |
| MS.gene055465 | MS.gene36741 | 0.830541 | 2.77E-55 | -1.69E-46 |
| MS.gene055466 | MS.gene36741 | 0.831597 | 1.53E-55 | -1.69E-46 |
| MS.gene055468 | MS.gene36741 | 0.824442 | 8.05E-54 | -1.69E-46 |
| MS.gene055778 | MS.gene36741 | 0.805934 | 1.05E-49 | -1.69E-46 |
| MS.gene056174 | MS.gene36741 | 0.84184 | 3.72E-58 | -1.69E-46 |
| MS.gene056760 | MS.gene36741 | 0.802974 | 4.35E-49 | -1.69E-46 |
| MS.gene05690 | MS.gene36741 | 0.805933 | 1.05E-49 | -1.69E-46 |
| MS.gene057060 | MS.gene36741 | 0.804812 | 1.80E-49 | -1.69E-46 |
| MS.gene057444 | MS.gene36741 | 0.808253 | 3.39E-50 | -1.69E-46 |
| MS.gene057693 | MS.gene36741 | 0.814031 | 1.89E-51 | -1.69E-46 |
| MS.gene057869 | MS.gene36741 | 0.806549 | 7.79E-50 | -1.69E-46 |
| MS.gene057915 | MS.gene36741 | 0.835771 | 1.38E-56 | -1.69E-46 |
| MS.gene058010 | MS.gene36741 | 0.801188 | 1.01E-48 | -1.69E-46 |
| MS.gene060259 | MS.gene36741 | 0.803995 | 2.67E-49 | -1.69E-46 |
| MS.gene060587 | MS.gene36741 | 0.818698 | 1.71E-52 | -1.69E-46 |
| MS.gene060803 | MS.gene36741 | 0.809034 | 2.31E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36741.t1 | MTR_8g014530 | 98.381 | 494 | 8 | 0 | 1 | 494 | 1 | 494 | 0.0 | 1002 |
| MS.gene36741.t1 | MTR_8g102460 | 74.200 | 469 | 119 | 2 | 25 | 492 | 26 | 493 | 0.0 | 735 |
| MS.gene36741.t1 | MTR_6g088795 | 69.913 | 462 | 138 | 1 | 32 | 492 | 30 | 491 | 0.0 | 681 |
| MS.gene36741.t1 | MTR_8g102460 | 74.581 | 358 | 91 | 0 | 135 | 492 | 1 | 358 | 0.0 | 569 |
| MS.gene36741.t1 | MTR_8g102460 | 76.205 | 332 | 77 | 2 | 25 | 355 | 26 | 356 | 0.0 | 530 |
| MS.gene36741.t1 | MTR_1g025140 | 57.616 | 453 | 189 | 3 | 40 | 491 | 42 | 492 | 0.0 | 520 |
| MS.gene36741.t1 | MTR_5g009000 | 56.476 | 471 | 192 | 5 | 29 | 489 | 29 | 496 | 9.83e-174 | 498 |
| MS.gene36741.t1 | MTR_1g025140 | 60.997 | 341 | 131 | 2 | 40 | 379 | 42 | 381 | 1.19e-143 | 417 |
| MS.gene36741.t1 | MTR_4g097900 | 49.077 | 271 | 97 | 4 | 221 | 488 | 1 | 233 | 2.37e-75 | 237 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36741.t1 | AT2G19860 | 71.660 | 494 | 139 | 1 | 1 | 493 | 1 | 494 | 0.0 | 729 |
| MS.gene36741.t1 | AT4G29130 | 72.874 | 494 | 133 | 1 | 1 | 493 | 1 | 494 | 0.0 | 729 |
| MS.gene36741.t1 | AT2G19860 | 73.247 | 385 | 102 | 1 | 110 | 493 | 1 | 385 | 0.0 | 588 |
| MS.gene36741.t1 | AT1G50460 | 52.008 | 473 | 213 | 6 | 26 | 487 | 26 | 495 | 5.27e-163 | 471 |
| MS.gene36741.t1 | AT1G47840 | 53.524 | 454 | 206 | 5 | 40 | 491 | 43 | 493 | 2.49e-162 | 469 |
| MS.gene36741.t1 | AT3G20040 | 49.393 | 494 | 241 | 4 | 1 | 487 | 1 | 492 | 6.16e-154 | 448 |
| MS.gene36741.t1 | AT1G50460 | 50.493 | 406 | 187 | 6 | 93 | 487 | 17 | 419 | 8.93e-129 | 381 |
| MS.gene36741.t1 | AT4G37840 | 44.770 | 478 | 234 | 8 | 22 | 486 | 22 | 482 | 6.51e-124 | 371 |
| MS.gene36741.t1 | AT1G50460 | 54.985 | 331 | 146 | 3 | 26 | 355 | 26 | 354 | 1.04e-121 | 361 |
| MS.gene36741.t1 | AT1G47840 | 58.176 | 318 | 129 | 4 | 40 | 355 | 43 | 358 | 2.30e-119 | 355 |
| MS.gene36741.t1 | AT1G47845 | 45.890 | 146 | 76 | 3 | 278 | 422 | 40 | 183 | 1.43e-33 | 125 |
Find 125 sgRNAs with CRISPR-Local
Find 229 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATAATTTCTGGAATGTATT+TGG | 0.102636 | 8.2:+78593400 | MS.gene36741:CDS |
| GGCAAATCACCGTGCCATTT+TGG | 0.226362 | 8.2:-78593077 | None:intergenic |
| TGAAAGTTCCATTCATATTA+AGG | 0.249236 | 8.2:+78593498 | MS.gene36741:CDS |
| CAACCACCTTTCTCACTTCT+AGG | 0.268954 | 8.2:-78594101 | None:intergenic |
| TCTCATTCTTATTACCTTGA+TGG | 0.273691 | 8.2:+78594399 | MS.gene36741:CDS |
| GAATAGTCATACTCAGTTAA+TGG | 0.280021 | 8.2:-78593247 | None:intergenic |
| ATAATTTCTGGAATGTATTT+GGG | 0.310052 | 8.2:+78593401 | MS.gene36741:CDS |
| GAAATGGATGTTTGCTTGAC+AGG | 0.331885 | 8.2:-78592602 | None:intergenic |
| TGTCCAGTTGATAAGGTTCC+CGG | 0.354220 | 8.2:-78592627 | None:intergenic |
| CTCTAAGATCTCCTTCAGTT+TGG | 0.361754 | 8.2:-78593917 | None:intergenic |
| CACGGTGATTTGCCCAAGTC+TGG | 0.362234 | 8.2:+78593086 | MS.gene36741:CDS |
| TGAAGAAAGTGAAGATTTCA+AGG | 0.377653 | 8.2:+78592535 | MS.gene36741:CDS |
| GATGTCCCGACCATCAAATT+TGG | 0.377775 | 8.2:-78592300 | None:intergenic |
| TTCGTTGATAATCTTCCTAC+AGG | 0.388159 | 8.2:+78590939 | MS.gene36741:CDS |
| AATTTGTACCTTAATATGAA+TGG | 0.398733 | 8.2:-78593506 | None:intergenic |
| CTTCCGGGAACCTTATCAAC+TGG | 0.399679 | 8.2:+78592624 | MS.gene36741:CDS |
| TTCCTCCAAATTTGATGGTC+GGG | 0.401839 | 8.2:+78592295 | MS.gene36741:CDS |
| CGCAATTGTACCTGTTCACC+AGG | 0.404155 | 8.2:-78593292 | None:intergenic |
| GTGGCGTGTGCGACGGTGAT+AGG | 0.406282 | 8.2:+78590702 | MS.gene36741:CDS |
| TCAAATGATGGTTCAGGAAC+TGG | 0.407132 | 8.2:+78594357 | MS.gene36741:CDS |
| GTGCTCAAGCAATACCAAAA+TGG | 0.410001 | 8.2:+78593063 | MS.gene36741:CDS |
| GATACAGTCGGGACATTAGC+TGG | 0.411737 | 8.2:+78592966 | MS.gene36741:CDS |
| AAGCAAACATCCATTTCTTC+CGG | 0.412903 | 8.2:+78592608 | MS.gene36741:CDS |
| GAGTTTAAACCCTGGTGAAC+AGG | 0.414005 | 8.2:+78593282 | MS.gene36741:CDS |
| TCGTAGAGTACTATACAAAA+TGG | 0.414429 | 8.2:+78593433 | MS.gene36741:CDS |
| ACATGGAGTGGGGAAACTTC+CGG | 0.420382 | 8.2:+78593212 | MS.gene36741:CDS |
| CACGTACGCTGCATTTGTTC+CGG | 0.422595 | 8.2:-78593036 | None:intergenic |
| TGATATGAACATAACAGCTT+TGG | 0.423547 | 8.2:+78592821 | MS.gene36741:CDS |
| GTCAATTCCTCCAAATTTGA+TGG | 0.432250 | 8.2:+78592290 | MS.gene36741:CDS |
| GTTGTTTACATAGGTTGGTC+AGG | 0.435843 | 8.2:+78592755 | MS.gene36741:intron |
| AGCAAACATCCATTTCTTCC+GGG | 0.437620 | 8.2:+78592609 | MS.gene36741:CDS |
| CAAACTGAAGGAGATCTTAG+AGG | 0.442709 | 8.2:+78593918 | MS.gene36741:CDS |
| AACCTTATCAACTGGACAAA+AGG | 0.443207 | 8.2:+78592632 | MS.gene36741:CDS |
| CACGCTGGTCTTGCTTCTGA+TGG | 0.450067 | 8.2:+78590888 | MS.gene36741:CDS |
| GATAAGGTTCCCGGAAGAAA+TGG | 0.455246 | 8.2:-78592618 | None:intergenic |
| ACTCACCATTTCTCCAGACT+TGG | 0.457826 | 8.2:-78593099 | None:intergenic |
| ACCAACGTTGAAGCTGAAAC+AGG | 0.462199 | 8.2:+78590839 | MS.gene36741:CDS |
| CGTGGGAATTCTGAAGAAGT+TGG | 0.463666 | 8.2:+78594179 | MS.gene36741:CDS |
| GAACACTCAAATGATGGTTC+AGG | 0.466423 | 8.2:+78594351 | MS.gene36741:CDS |
| CACACGTAATACACGAAAGT+TGG | 0.475426 | 8.2:-78592220 | None:intergenic |
| GGTGCTCGTCTTTCTGCAGC+TGG | 0.483516 | 8.2:+78594153 | MS.gene36741:CDS |
| ACAAAATGGCTGAAGAAGCT+TGG | 0.486720 | 8.2:+78593447 | MS.gene36741:CDS |
| GTGGGAATTCTGAAGAAGTT+GGG | 0.490235 | 8.2:+78594180 | MS.gene36741:CDS |
| ATCGTTGAACACTCAAATGA+TGG | 0.490582 | 8.2:+78594345 | MS.gene36741:CDS |
| ATTCTTCTGACCCTCGCCAT+TGG | 0.494342 | 8.2:-78594217 | None:intergenic |
| CCTAGCTCCCTCTTTCTACC+TGG | 0.503608 | 8.2:-78592563 | None:intergenic |
| CTGACCCTCGCCATTGGTGA+TGG | 0.505110 | 8.2:-78594211 | None:intergenic |
| CCAGGTAGAAAGAGGGAGCT+AGG | 0.506646 | 8.2:+78592563 | MS.gene36741:CDS |
| TTGCTTGACAGGAAAGGAAA+AGG | 0.507613 | 8.2:-78592591 | None:intergenic |
| CTCATATAGTCCGCCATCCA+TGG | 0.510941 | 8.2:-78594247 | None:intergenic |
| AACCACCTTTCTCACTTCTA+GGG | 0.512710 | 8.2:-78594100 | None:intergenic |
| CGGAACAAATGCAGCGTACG+TGG | 0.515444 | 8.2:+78593037 | MS.gene36741:CDS |
| ATGATAATTGCTAACCATCA+AGG | 0.517087 | 8.2:-78594413 | None:intergenic |
| TTTGCCCAAGTCTGGAGAAA+TGG | 0.519733 | 8.2:+78593094 | MS.gene36741:CDS |
| TTAATGGAAGGTGCGATGAC+CGG | 0.525333 | 8.2:-78593231 | None:intergenic |
| AGCAACGGCGGCGTGTGTGG+TGG | 0.526558 | 8.2:+78590725 | MS.gene36741:CDS |
| TGACATCCTTGTTTGTATGT+CGG | 0.537032 | 8.2:-78592992 | None:intergenic |
| AAAAGCAATAGCGATATTGA+AGG | 0.541074 | 8.2:+78590794 | MS.gene36741:CDS |
| CTTTCTGCAGCTGGTATCGT+GGG | 0.541549 | 8.2:+78594162 | MS.gene36741:CDS |
| GGCGGCGTGTGTGGTGGCGA+CGG | 0.541737 | 8.2:+78590731 | MS.gene36741:CDS |
| TGCAGAAAGACGAGCACCAC+GGG | 0.544093 | 8.2:-78594148 | None:intergenic |
| AGGTTCCTCCAGGTAGAAAG+AGG | 0.544405 | 8.2:+78592555 | MS.gene36741:CDS |
| GGATGTTTGCTTGACAGGAA+AGG | 0.545412 | 8.2:-78592597 | None:intergenic |
| GAAGATTTCAAGGTTCCTCC+AGG | 0.545754 | 8.2:+78592545 | MS.gene36741:CDS |
| CGTGTATTACGTGTGCAACT+TGG | 0.548240 | 8.2:+78592228 | MS.gene36741:CDS |
| AATACCATAAAAGAGTTGCT+TGG | 0.548770 | 8.2:+78594300 | MS.gene36741:CDS |
| ATTCCTCCAAATTTGATGGT+CGG | 0.548843 | 8.2:+78592294 | MS.gene36741:CDS |
| AAAGGTGGTGGCGTGTGCGA+CGG | 0.549544 | 8.2:+78590695 | MS.gene36741:CDS |
| ACGTGAAGAAATCGAAGCGA+TGG | 0.554895 | 8.2:+78590769 | MS.gene36741:CDS |
| TCTTTCTGCAGCTGGTATCG+TGG | 0.555070 | 8.2:+78594161 | MS.gene36741:CDS |
| ATAAAAGAGTTGCTTGGTGA+AGG | 0.558125 | 8.2:+78594306 | MS.gene36741:CDS |
| GTAGGTTATCAACATGGAGT+GGG | 0.559686 | 8.2:+78593201 | MS.gene36741:intron |
| CTCACCATTTCTCCAGACTT+GGG | 0.559699 | 8.2:-78593098 | None:intergenic |
| AGGAGCAACGGCGGCGTGTG+TGG | 0.559858 | 8.2:+78590722 | MS.gene36741:CDS |
| TGCAATATTGTTGCTACCCG+TGG | 0.560003 | 8.2:+78594132 | MS.gene36741:CDS |
| GTTGCTTGGTGAAGGTGTAT+CGG | 0.561921 | 8.2:+78594314 | MS.gene36741:CDS |
| ATAGGTTGGTCAGGATGTTG+TGG | 0.569173 | 8.2:+78592764 | MS.gene36741:intron |
| GTCCCGACCATCAAATTTGG+AGG | 0.570166 | 8.2:-78592297 | None:intergenic |
| ACCTGTTTCAGCTTCAACGT+TGG | 0.570181 | 8.2:-78590840 | None:intergenic |
| TGATGCATGGCAGACATGTC+AGG | 0.576522 | 8.2:-78593862 | None:intergenic |
| TACCTCCCTAGAAGTGAGAA+AGG | 0.582685 | 8.2:+78594095 | MS.gene36741:CDS |
| CGTGAAGAAATCGAAGCGAT+GGG | 0.582816 | 8.2:+78590770 | MS.gene36741:CDS |
| AATAGGTCAATGATACAGTC+GGG | 0.583803 | 8.2:+78592955 | MS.gene36741:intron |
| GCTGGTCTTGCTTCTGATGG+TGG | 0.587614 | 8.2:+78590891 | MS.gene36741:CDS |
| CAATAGGTCAATGATACAGT+CGG | 0.587691 | 8.2:+78592954 | MS.gene36741:intron |
| CACGAAAGTTGGTTCCTCCA+AGG | 0.597901 | 8.2:-78592209 | None:intergenic |
| AGCGGACGAGTCATGATGCA+TGG | 0.597968 | 8.2:-78593875 | None:intergenic |
| GTGCAACTTGGTGGCAAGGA+TGG | 0.599780 | 8.2:+78592240 | MS.gene36741:CDS |
| GTATTACGTGTGCAACTTGG+TGG | 0.603393 | 8.2:+78592231 | MS.gene36741:CDS |
| GATACCATCACCAATGGCGA+GGG | 0.608591 | 8.2:+78594207 | MS.gene36741:CDS |
| TCAGAAGAATGTGATAGCCA+TGG | 0.609370 | 8.2:+78594230 | MS.gene36741:CDS |
| CGTGGTCAAAACCAAACTGA+AGG | 0.612639 | 8.2:+78593906 | MS.gene36741:CDS |
| CACCTTTCTCACTTCTAGGG+AGG | 0.616334 | 8.2:-78594097 | None:intergenic |
| AGTCATACTCAGTTAATGGA+AGG | 0.616474 | 8.2:-78593243 | None:intergenic |
| TGCGACGGTGATAGGAGCAA+CGG | 0.625086 | 8.2:+78590710 | MS.gene36741:CDS |
| GGTTCCTCCAGGTAGAAAGA+GGG | 0.629047 | 8.2:+78592556 | MS.gene36741:CDS |
| GGAAAAGATACCATCACCAA+TGG | 0.629885 | 8.2:+78594201 | MS.gene36741:CDS |
| TGTAGGTTATCAACATGGAG+TGG | 0.631248 | 8.2:+78593200 | MS.gene36741:intron |
| AGATACCATCACCAATGGCG+AGG | 0.631420 | 8.2:+78594206 | MS.gene36741:CDS |
| TTTGACCACGTTGAGATCAG+CGG | 0.635751 | 8.2:-78593893 | None:intergenic |
| TCGTTGATAATCTTCCTACA+GGG | 0.639680 | 8.2:+78590940 | MS.gene36741:CDS |
| ACAGGTTGCTGATGCAATGA+CGG | 0.641090 | 8.2:+78590857 | MS.gene36741:CDS |
| AAGAATGTGATAGCCATGGA+TGG | 0.641622 | 8.2:+78594234 | MS.gene36741:CDS |
| TCCCTCTCTGTTTAGGAACG+AGG | 0.652781 | 8.2:+78592164 | MS.gene36741:intron |
| AGCTCCCTCTTTCTACCTGG+AGG | 0.653342 | 8.2:-78592560 | None:intergenic |
| ACGTGTGCAACTTGGTGGCA+AGG | 0.654572 | 8.2:+78592236 | MS.gene36741:CDS |
| ATGACGGTGGAGATGCACGC+TGG | 0.657627 | 8.2:+78590873 | MS.gene36741:CDS |
| GTGAAGAAATCGAAGCGATG+GGG | 0.658037 | 8.2:+78590771 | MS.gene36741:CDS |
| TAGGTTATCAACATGGAGTG+GGG | 0.662335 | 8.2:+78593202 | MS.gene36741:intron |
| AGAAAAGCAATTGAGAGACA+AGG | 0.664902 | 8.2:+78592795 | MS.gene36741:CDS |
| ATTTGGAGGAATTGACACCT+CGG | 0.667035 | 8.2:-78592283 | None:intergenic |
| TCTCTGTTTAGGAACGAGGA+AGG | 0.672788 | 8.2:+78592168 | MS.gene36741:intron |
| CAAGCAATACCAAAATGGCA+CGG | 0.683179 | 8.2:+78593068 | MS.gene36741:CDS |
| GCAATTGTACCTGTTCACCA+GGG | 0.688661 | 8.2:-78593291 | None:intergenic |
| CTGCAGAAAGACGAGCACCA+CGG | 0.694987 | 8.2:-78594149 | None:intergenic |
| ACTGATGTAGGTTATCAACA+TGG | 0.696815 | 8.2:+78593195 | MS.gene36741:intron |
| AATGTGATAGCCATGGATGG+CGG | 0.697169 | 8.2:+78594237 | MS.gene36741:CDS |
| CTCCCTAGAAGTGAGAAAGG+TGG | 0.698711 | 8.2:+78594098 | MS.gene36741:CDS |
| GATGCTGAGAGTTTAAACCC+TGG | 0.699870 | 8.2:+78593274 | MS.gene36741:CDS |
| CTCGTCCGCTGATCTCAACG+TGG | 0.700399 | 8.2:+78593888 | MS.gene36741:CDS |
| TGGAGGCCGACATACAAACA+AGG | 0.703627 | 8.2:+78592986 | MS.gene36741:CDS |
| GACGGTGATAGGAGCAACGG+CGG | 0.709850 | 8.2:+78590713 | MS.gene36741:CDS |
| ACAGTCGGGACATTAGCTGG+AGG | 0.724132 | 8.2:+78592969 | MS.gene36741:CDS |
| GGTTGCTGATGCAATGACGG+TGG | 0.729595 | 8.2:+78590860 | MS.gene36741:CDS |
| TGTCAGTCGAGAATTTACCG+AGG | 0.797194 | 8.2:+78592266 | MS.gene36741:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATACAATTAAAAAAACAAAA+AGG | - | chr8.2:78594064-78594083 | None:intergenic | 10.0% |
| !!! | AAAATATTTTAATACTTTTC+AGG | - | chr8.2:78592131-78592150 | None:intergenic | 10.0% |
| !! | ATTAAAAAAACAAAAAGGAA+CGG | - | chr8.2:78594059-78594078 | None:intergenic | 15.0% |
| !! | AAACTGAGTATAAAATGTAA+AGG | - | chr8.2:78592731-78592750 | None:intergenic | 20.0% |
| !! | AAGAGTAAATAGTAATTGTT+AGG | - | chr8.2:78592371-78592390 | None:intergenic | 20.0% |
| !! | AATAAAATTCTTGAATTCCT+TGG | + | chr8.2:78593753-78593772 | MS.gene36741:intron | 20.0% |
| !! | AATCTATAAAAATGTGATTC+AGG | + | chr8.2:78592469-78592488 | MS.gene36741:intron | 20.0% |
| !! | AATTTGTACCTTAATATGAA+TGG | - | chr8.2:78593509-78593528 | None:intergenic | 20.0% |
| !! | ATATATAGACACATAAAAAG+TGG | - | chr8.2:78591897-78591916 | None:intergenic | 20.0% |
| !! | ATTACAGATTAAGCAAATTT+AGG | - | chr8.2:78593632-78593651 | None:intergenic | 20.0% |
| !! | CTATAAAAATTCAAAATGCT+CGG | - | chr8.2:78592108-78592127 | None:intergenic | 20.0% |
| !! | TGTTTATTTAAGCTGTTTAT+CGG | + | chr8.2:78591685-78591704 | MS.gene36741:intron | 20.0% |
| !! | TTAAATGTTATGATAAGTGA+CGG | + | chr8.2:78591551-78591570 | MS.gene36741:intron | 20.0% |
| !! | TTTATTGAATTTAGCTGTTA+TGG | + | chr8.2:78591658-78591677 | MS.gene36741:intron | 20.0% |
| !!! | AATGACATCTGAATTTTTAA+AGG | + | chr8.2:78594003-78594022 | MS.gene36741:intron | 20.0% |
| !!! | AGATGTAATTGTTTTTCTAA+TGG | + | chr8.2:78592001-78592020 | MS.gene36741:intron | 20.0% |
| !!! | ATAATTTCTGGAATGTATTT+GGG | + | chr8.2:78593401-78593420 | MS.gene36741:CDS | 20.0% |
| !!! | GCATTTTCAATTAATTTTTC+TGG | + | chr8.2:78592885-78592904 | MS.gene36741:intron | 20.0% |
| !!! | TGAATCACATTTTTATAGAT+TGG | - | chr8.2:78592470-78592489 | None:intergenic | 20.0% |
| !!! | TTCTTTGTTTGTTTATAAGT+TGG | + | chr8.2:78591326-78591345 | MS.gene36741:intron | 20.0% |
| !!! | TTTTATCAAATAAATACCAG+TGG | - | chr8.2:78591199-78591218 | None:intergenic | 20.0% |
| ! | AAGAAGTTCGATTATAATAC+TGG | - | chr8.2:78593808-78593827 | None:intergenic | 25.0% |
| ! | AATTTAGGCAGAAAGAAATT+AGG | - | chr8.2:78593617-78593636 | None:intergenic | 25.0% |
| ! | ATAGTAAGCAAATAACTTTC+TGG | - | chr8.2:78592395-78592414 | None:intergenic | 25.0% |
| ! | ATTAATAGCCTCGTTTATTA+AGG | - | chr8.2:78593336-78593355 | None:intergenic | 25.0% |
| ! | GAGATTTATTTAGAGAATGT+TGG | + | chr8.2:78591364-78591383 | MS.gene36741:intron | 25.0% |
| ! | GATTAAAGCAAATAACTTTC+TGG | - | chr8.2:78592427-78592446 | None:intergenic | 25.0% |
| ! | TAACAATAAATGAGCACAAA+TGG | - | chr8.2:78591756-78591775 | None:intergenic | 25.0% |
| ! | TAGATCAACATGATTAAGAT+TGG | - | chr8.2:78590981-78591000 | None:intergenic | 25.0% |
| ! | TCATTCAAACTTCAATAAGA+AGG | - | chr8.2:78591725-78591744 | None:intergenic | 25.0% |
| ! | TCGATTATAATACTGGTAAA+GGG | - | chr8.2:78593801-78593820 | None:intergenic | 25.0% |
| ! | TGAAAGTTCCATTCATATTA+AGG | + | chr8.2:78593498-78593517 | MS.gene36741:CDS | 25.0% |
| ! | TTATATATTCAGCATCCAAT+AGG | + | chr8.2:78592938-78592957 | MS.gene36741:intron | 25.0% |
| ! | TTCGATTATAATACTGGTAA+AGG | - | chr8.2:78593802-78593821 | None:intergenic | 25.0% |
| !! | GTAATTGTTGATAAAGTAGA+CGG | + | chr8.2:78591487-78591506 | MS.gene36741:intron | 25.0% |
| !! | TACACTAAAAAAAGCCTTTT+TGG | - | chr8.2:78593980-78593999 | None:intergenic | 25.0% |
| !!! | ACTTTTGAGAAGATAATTTC+TGG | + | chr8.2:78593389-78593408 | MS.gene36741:CDS | 25.0% |
| !!! | AGTTTTATCGTTGTTTACAT+AGG | + | chr8.2:78592746-78592765 | MS.gene36741:intron | 25.0% |
| !!! | ATAAACTGATTTTGTACTAG+AGG | + | chr8.2:78591776-78591795 | MS.gene36741:intron | 25.0% |
| !!! | GATAATTTCTGGAATGTATT+TGG | + | chr8.2:78593400-78593419 | MS.gene36741:CDS | 25.0% |
| !!! | TGAATTTTTAAAGGTCGATA+TGG | + | chr8.2:78594012-78594031 | MS.gene36741:intron | 25.0% |
| AAAAGCAATAGCGATATTGA+AGG | + | chr8.2:78590794-78590813 | MS.gene36741:CDS | 30.0% | |
| AATACCATAAAAGAGTTGCT+TGG | + | chr8.2:78594300-78594319 | MS.gene36741:CDS | 30.0% | |
| AATGTATGGTCGAAAATTTC+AGG | - | chr8.2:78593365-78593384 | None:intergenic | 30.0% | |
| AGTTATGAGATGTGACTAAT+GGG | - | chr8.2:78592045-78592064 | None:intergenic | 30.0% | |
| ATTGTAACATTCGTGATTGT+TGG | + | chr8.2:78593566-78593585 | MS.gene36741:intron | 30.0% | |
| CGATTATAATACTGGTAAAG+GGG | - | chr8.2:78593800-78593819 | None:intergenic | 30.0% | |
| CTTATTTGCCTTAATAAACG+AGG | + | chr8.2:78593325-78593344 | MS.gene36741:intron | 30.0% | |
| GAATAGTCATACTCAGTTAA+TGG | - | chr8.2:78593250-78593269 | None:intergenic | 30.0% | |
| TCTCAAAAGTCTACAATGTA+TGG | - | chr8.2:78593379-78593398 | None:intergenic | 30.0% | |
| TCTCATTCTTATTACCTTGA+TGG | + | chr8.2:78594399-78594418 | MS.gene36741:CDS | 30.0% | |
| TGAAGAAAGTGAAGATTTCA+AGG | + | chr8.2:78592535-78592554 | MS.gene36741:CDS | 30.0% | |
| TGATATGAACATAACAGCTT+TGG | + | chr8.2:78592821-78592840 | MS.gene36741:CDS | 30.0% | |
| TGTAAAGGTGAAAGAATAAC+CGG | - | chr8.2:78592716-78592735 | None:intergenic | 30.0% | |
| TTATCGTTGTTTACATAGGT+TGG | + | chr8.2:78592750-78592769 | MS.gene36741:intron | 30.0% | |
| TTGTGTAAGCAATATTCACA+TGG | - | chr8.2:78593723-78593742 | None:intergenic | 30.0% | |
| ! | ACGAATGTTGATAAAGTAGA+TGG | + | chr8.2:78591604-78591623 | MS.gene36741:intron | 30.0% |
| ! | TATAAGAAGCACATTAACCA+AGG | - | chr8.2:78593773-78593792 | None:intergenic | 30.0% |
| ! | TCGTAGAGTACTATACAAAA+TGG | + | chr8.2:78593433-78593452 | MS.gene36741:CDS | 30.0% |
| ! | TGTTTTCACTATCTTCTGTT+TGG | - | chr8.2:78593680-78593699 | None:intergenic | 30.0% |
| !! | AATGGAACTTTCAGTTTTGA+AGG | - | chr8.2:78593491-78593510 | None:intergenic | 30.0% |
| !! | TATAAGTTGGCTTTGTATCA+TGG | + | chr8.2:78591339-78591358 | MS.gene36741:intron | 30.0% |
| !!! | AACTTTCAGTTTTGAAGGAA+TGG | - | chr8.2:78593486-78593505 | None:intergenic | 30.0% |
| AACCTTATCAACTGGACAAA+AGG | + | chr8.2:78592632-78592651 | MS.gene36741:CDS | 35.0% | |
| AAGCAAACATCCATTTCTTC+CGG | + | chr8.2:78592608-78592627 | MS.gene36741:CDS | 35.0% | |
| AATAGGTCAATGATACAGTC+GGG | + | chr8.2:78592955-78592974 | MS.gene36741:intron | 35.0% | |
| AATGTTACAATGCATGCAAG+TGG | - | chr8.2:78593557-78593576 | None:intergenic | 35.0% | |
| ACCATAATAATTTGACGTGC+AGG | + | chr8.2:78593836-78593855 | MS.gene36741:intron | 35.0% | |
| ACTGATGTAGGTTATCAACA+TGG | + | chr8.2:78593195-78593214 | MS.gene36741:intron | 35.0% | |
| AGAAAAGCAATTGAGAGACA+AGG | + | chr8.2:78592795-78592814 | MS.gene36741:CDS | 35.0% | |
| AGTCATACTCAGTTAATGGA+AGG | - | chr8.2:78593246-78593265 | None:intergenic | 35.0% | |
| ATCGTTGAACACTCAAATGA+TGG | + | chr8.2:78594345-78594364 | MS.gene36741:CDS | 35.0% | |
| ATTAGGAGAAACTGAAGCAT+CGG | - | chr8.2:78593600-78593619 | None:intergenic | 35.0% | |
| CAATAGGTCAATGATACAGT+CGG | + | chr8.2:78592954-78592973 | MS.gene36741:intron | 35.0% | |
| CAGTTATGAGATGTGACTAA+TGG | - | chr8.2:78592046-78592065 | None:intergenic | 35.0% | |
| CATCAAAGCAATTAGGATTC+TGG | - | chr8.2:78592683-78592702 | None:intergenic | 35.0% | |
| GAAGTTGCTAGTTGACAATT+GGG | + | chr8.2:78591971-78591990 | MS.gene36741:intron | 35.0% | |
| GGTCATGTTTCTCATACAAA+TGG | - | chr8.2:78592449-78592468 | None:intergenic | 35.0% | |
| GTCAATTCCTCCAAATTTGA+TGG | + | chr8.2:78592290-78592309 | MS.gene36741:CDS | 35.0% | |
| TCAAAAAAGTGATACCCTGT+AGG | - | chr8.2:78590957-78590976 | None:intergenic | 35.0% | |
| TCAATATATGCGACTGATGT+AGG | + | chr8.2:78593183-78593202 | MS.gene36741:intron | 35.0% | |
| TCCCATCAATGTTTCCAAAA+AGG | + | chr8.2:78593963-78593982 | MS.gene36741:intron | 35.0% | |
| TCCTGCACGTCAAATTATTA+TGG | - | chr8.2:78593840-78593859 | None:intergenic | 35.0% | |
| TCGGCTATACGAATGAAATT+AGG | - | chr8.2:78591068-78591087 | None:intergenic | 35.0% | |
| ! | ATAAAAGAGTTGCTTGGTGA+AGG | + | chr8.2:78594306-78594325 | MS.gene36741:CDS | 35.0% |
| ! | ATTCCTCCAAATTTGATGGT+CGG | + | chr8.2:78592294-78592313 | MS.gene36741:CDS | 35.0% |
| ! | CTATTTTATGCATTGGACCT+TGG | + | chr8.2:78592192-78592211 | MS.gene36741:CDS | 35.0% |
| ! | GATTGTGAACATTTGTTGCT+TGG | + | chr8.2:78591850-78591869 | MS.gene36741:intron | 35.0% |
| ! | GGAAGGACTATTTTATGCAT+TGG | + | chr8.2:78592185-78592204 | MS.gene36741:CDS | 35.0% |
| ! | TGACATCCTTGTTTGTATGT+CGG | - | chr8.2:78592995-78593014 | None:intergenic | 35.0% |
| ! | TTCACCAAGCAACTCTTTTA+TGG | - | chr8.2:78594307-78594326 | None:intergenic | 35.0% |
| !! | AGCCTTTTTGGAAACATTGA+TGG | - | chr8.2:78593968-78593987 | None:intergenic | 35.0% |
| !! | GCCTTTTTGGAAACATTGAT+GGG | - | chr8.2:78593967-78593986 | None:intergenic | 35.0% |
| !! | GGAAAAGCATCAAAGCAATT+AGG | - | chr8.2:78592690-78592709 | None:intergenic | 35.0% |
| !! | TCGTTGATAATCTTCCTACA+GGG | + | chr8.2:78590940-78590959 | MS.gene36741:CDS | 35.0% |
| !! | TTCGTTGATAATCTTCCTAC+AGG | + | chr8.2:78590939-78590958 | MS.gene36741:CDS | 35.0% |
| !!! | GTCATTGCTGCTGTTATTTT+AGG | + | chr8.2:78593011-78593030 | MS.gene36741:CDS | 35.0% |
| AACCACCTTTCTCACTTCTA+GGG | - | chr8.2:78594103-78594122 | None:intergenic | 40.0% | |
| AAGAATGTGATAGCCATGGA+TGG | + | chr8.2:78594234-78594253 | MS.gene36741:CDS | 40.0% | |
| ACAAAATGGCTGAAGAAGCT+TGG | + | chr8.2:78593447-78593466 | MS.gene36741:CDS | 40.0% | |
| AGCAAACATCCATTTCTTCC+GGG | + | chr8.2:78592609-78592628 | MS.gene36741:CDS | 40.0% | |
| AGGTGAAAGAATAACCGGAA+AGG | - | chr8.2:78592711-78592730 | None:intergenic | 40.0% | |
| ATTTGGAGGAATTGACACCT+CGG | - | chr8.2:78592286-78592305 | None:intergenic | 40.0% | |
| CAAAAAGGAACGGAGTTAAG+CGG | - | chr8.2:78594049-78594068 | None:intergenic | 40.0% | |
| CAAACTGAAGGAGATCTTAG+AGG | + | chr8.2:78593918-78593937 | MS.gene36741:CDS | 40.0% | |
| CAAGCAATACCAAAATGGCA+CGG | + | chr8.2:78593068-78593087 | MS.gene36741:CDS | 40.0% | |
| CACACGTAATACACGAAAGT+TGG | - | chr8.2:78592223-78592242 | None:intergenic | 40.0% | |
| CATATGTGTCTGTGTCATGT+TGG | + | chr8.2:78591238-78591257 | MS.gene36741:intron | 40.0% | |
| CGAAGTTGCTAGTTGACAAT+TGG | + | chr8.2:78591970-78591989 | MS.gene36741:intron | 40.0% | |
| CGACTGTATCATTGACCTAT+TGG | - | chr8.2:78592956-78592975 | None:intergenic | 40.0% | |
| CTTTACATCCCTCTCTGTTT+AGG | + | chr8.2:78592157-78592176 | MS.gene36741:intron | 40.0% | |
| GAAATGGATGTTTGCTTGAC+AGG | - | chr8.2:78592605-78592624 | None:intergenic | 40.0% | |
| GAACACTCAAATGATGGTTC+AGG | + | chr8.2:78594351-78594370 | MS.gene36741:CDS | 40.0% | |
| GGAAAAGATACCATCACCAA+TGG | + | chr8.2:78594201-78594220 | MS.gene36741:CDS | 40.0% | |
| GTAGGTTATCAACATGGAGT+GGG | + | chr8.2:78593201-78593220 | MS.gene36741:intron | 40.0% | |
| GTCCATGTTTCAAATACCAG+TGG | - | chr8.2:78591151-78591170 | None:intergenic | 40.0% | |
| GTGCTCAAGCAATACCAAAA+TGG | + | chr8.2:78593063-78593082 | MS.gene36741:CDS | 40.0% | |
| TAGGTTATCAACATGGAGTG+GGG | + | chr8.2:78593202-78593221 | MS.gene36741:intron | 40.0% | |
| TCAAATGATGGTTCAGGAAC+TGG | + | chr8.2:78594357-78594376 | MS.gene36741:CDS | 40.0% | |
| TCAGAAGAATGTGATAGCCA+TGG | + | chr8.2:78594230-78594249 | MS.gene36741:CDS | 40.0% | |
| TGTAGGTTATCAACATGGAG+TGG | + | chr8.2:78593200-78593219 | MS.gene36741:intron | 40.0% | |
| TTGCTTGACAGGAAAGGAAA+AGG | - | chr8.2:78592594-78592613 | None:intergenic | 40.0% | |
| ! | CACCACTGGTATTTGAAACA+TGG | + | chr8.2:78591146-78591165 | MS.gene36741:intron | 40.0% |
| ! | GCTTTGATGCTTTTCCTTTC+CGG | + | chr8.2:78592694-78592713 | MS.gene36741:intron | 40.0% |
| ! | GGTATTTGAAACATGGACAC+CGG | + | chr8.2:78591153-78591172 | MS.gene36741:intron | 40.0% |
| ! | GTGGGAATTCTGAAGAAGTT+GGG | + | chr8.2:78594180-78594199 | MS.gene36741:CDS | 40.0% |
| ! | TTCCTCCAAATTTGATGGTC+GGG | + | chr8.2:78592295-78592314 | MS.gene36741:CDS | 40.0% |
| ! | TTTTATGCATTGGACCTTGG+AGG | + | chr8.2:78592195-78592214 | MS.gene36741:CDS | 40.0% |
| !! | AGCCTTTTGTCCAGTTGATA+AGG | - | chr8.2:78592637-78592656 | None:intergenic | 40.0% |
| !! | AGGCTTTGAAACATGTACAC+CGG | + | chr8.2:78591105-78591124 | MS.gene36741:intron | 40.0% |
| !! | CTCTAAGATCTCCTTCAGTT+TGG | - | chr8.2:78593920-78593939 | None:intergenic | 40.0% |
| !! | GTTGTTTACATAGGTTGGTC+AGG | + | chr8.2:78592755-78592774 | MS.gene36741:intron | 40.0% |
| !!! | GCTGAAGAAGCTTGGTTTTT+TGG | + | chr8.2:78593455-78593474 | MS.gene36741:CDS | 40.0% |
| !!! | GCTGCTGTTATTTTAGGTAC+CGG | + | chr8.2:78593017-78593036 | MS.gene36741:CDS | 40.0% |
| AATGTGATAGCCATGGATGG+CGG | + | chr8.2:78594237-78594256 | MS.gene36741:CDS | 45.0% | |
| ACAGGTTGCTGATGCAATGA+CGG | + | chr8.2:78590857-78590876 | MS.gene36741:CDS | 45.0% | |
| ACCAACGTTGAAGCTGAAAC+AGG | + | chr8.2:78590839-78590858 | MS.gene36741:CDS | 45.0% | |
| ACCTGTTTCAGCTTCAACGT+TGG | - | chr8.2:78590843-78590862 | None:intergenic | 45.0% | |
| ACGTGAAGAAATCGAAGCGA+TGG | + | chr8.2:78590769-78590788 | MS.gene36741:CDS | 45.0% | |
| ACTCACCATTTCTCCAGACT+TGG | - | chr8.2:78593102-78593121 | None:intergenic | 45.0% | |
| CAACCACCTTTCTCACTTCT+AGG | - | chr8.2:78594104-78594123 | None:intergenic | 45.0% | |
| CGTGAAGAAATCGAAGCGAT+GGG | + | chr8.2:78590770-78590789 | MS.gene36741:CDS | 45.0% | |
| CGTGGTCAAAACCAAACTGA+AGG | + | chr8.2:78593906-78593925 | MS.gene36741:CDS | 45.0% | |
| CGTGTATTACGTGTGCAACT+TGG | + | chr8.2:78592228-78592247 | MS.gene36741:CDS | 45.0% | |
| CTCACCATTTCTCCAGACTT+GGG | - | chr8.2:78593101-78593120 | None:intergenic | 45.0% | |
| GAAGATTTCAAGGTTCCTCC+AGG | + | chr8.2:78592545-78592564 | MS.gene36741:CDS | 45.0% | |
| GACACTAAACAAGTCACCAC+TGG | + | chr8.2:78591180-78591199 | MS.gene36741:intron | 45.0% | |
| GAGTTTAAACCCTGGTGAAC+AGG | + | chr8.2:78593282-78593301 | MS.gene36741:CDS | 45.0% | |
| GATAAGGTTCCCGGAAGAAA+TGG | - | chr8.2:78592621-78592640 | None:intergenic | 45.0% | |
| GATGCTGAGAGTTTAAACCC+TGG | + | chr8.2:78593274-78593293 | MS.gene36741:CDS | 45.0% | |
| GATGTCCCGACCATCAAATT+TGG | - | chr8.2:78592303-78592322 | None:intergenic | 45.0% | |
| GCAATTGTACCTGTTCACCA+GGG | - | chr8.2:78593294-78593313 | None:intergenic | 45.0% | |
| GGATGTTTGCTTGACAGGAA+AGG | - | chr8.2:78592600-78592619 | None:intergenic | 45.0% | |
| GTATTACGTGTGCAACTTGG+TGG | + | chr8.2:78592231-78592250 | MS.gene36741:CDS | 45.0% | |
| GTGAAGAAATCGAAGCGATG+GGG | + | chr8.2:78590771-78590790 | MS.gene36741:CDS | 45.0% | |
| TACCTCCCTAGAAGTGAGAA+AGG | + | chr8.2:78594095-78594114 | MS.gene36741:CDS | 45.0% | |
| TCCTCGTTCCTAAACAGAGA+GGG | - | chr8.2:78592168-78592187 | None:intergenic | 45.0% | |
| TCGATGCTAGAGAGTTGTTG+AGG | + | chr8.2:78591291-78591310 | MS.gene36741:intron | 45.0% | |
| TCTCTGTTTAGGAACGAGGA+AGG | + | chr8.2:78592168-78592187 | MS.gene36741:intron | 45.0% | |
| TGCAATATTGTTGCTACCCG+TGG | + | chr8.2:78594132-78594151 | MS.gene36741:CDS | 45.0% | |
| TGTCAGTCGAGAATTTACCG+AGG | + | chr8.2:78592266-78592285 | MS.gene36741:CDS | 45.0% | |
| TTCCTCGTTCCTAAACAGAG+AGG | - | chr8.2:78592169-78592188 | None:intergenic | 45.0% | |
| TTTGACCACGTTGAGATCAG+CGG | - | chr8.2:78593896-78593915 | None:intergenic | 45.0% | |
| TTTGCCCAAGTCTGGAGAAA+TGG | + | chr8.2:78593094-78593113 | MS.gene36741:CDS | 45.0% | |
| ! | AAAGCCTTATCCCACCAAGT+GGG | - | chr8.2:78591092-78591111 | None:intergenic | 45.0% |
| ! | CGTGGGAATTCTGAAGAAGT+TGG | + | chr8.2:78594179-78594198 | MS.gene36741:CDS | 45.0% |
| ! | GACTTGTTTAGTGTCGTGTC+CGG | - | chr8.2:78591175-78591194 | None:intergenic | 45.0% |
| ! | GTTGCTTGGTGAAGGTGTAT+CGG | + | chr8.2:78594314-78594333 | MS.gene36741:CDS | 45.0% |
| ! | TTAATGGAAGGTGCGATGAC+CGG | - | chr8.2:78593234-78593253 | None:intergenic | 45.0% |
| !! | ATAGGTTGGTCAGGATGTTG+TGG | + | chr8.2:78592764-78592783 | MS.gene36741:intron | 45.0% |
| !! | TGTCCAGTTGATAAGGTTCC+CGG | - | chr8.2:78592630-78592649 | None:intergenic | 45.0% |
| !! | TTAAAATTTCTATAAAAAAA+GGG | + | chr8.2:78591430-78591449 | MS.gene36741:intron | 5.0% |
| !!! | TTTAAAATTTCTATAAAAAA+AGG | + | chr8.2:78591429-78591448 | MS.gene36741:intron | 5.0% |
| ACAATGCATGCAAGTGGCAG+AGG | - | chr8.2:78593551-78593570 | None:intergenic | 50.0% | |
| ACATGGAGTGGGGAAACTTC+CGG | + | chr8.2:78593212-78593231 | MS.gene36741:CDS | 50.0% | |
| AGATACCATCACCAATGGCG+AGG | + | chr8.2:78594206-78594225 | MS.gene36741:CDS | 50.0% | |
| AGGTTCCTCCAGGTAGAAAG+AGG | + | chr8.2:78592555-78592574 | MS.gene36741:CDS | 50.0% | |
| ATTCTTCTGACCCTCGCCAT+TGG | - | chr8.2:78594220-78594239 | None:intergenic | 50.0% | |
| CACGTACGCTGCATTTGTTC+CGG | - | chr8.2:78593039-78593058 | None:intergenic | 50.0% | |
| CGCAATTGTACCTGTTCACC+AGG | - | chr8.2:78593295-78593314 | None:intergenic | 50.0% | |
| CTCATATAGTCCGCCATCCA+TGG | - | chr8.2:78594250-78594269 | None:intergenic | 50.0% | |
| CTCCCTAGAAGTGAGAAAGG+TGG | + | chr8.2:78594098-78594117 | MS.gene36741:CDS | 50.0% | |
| CTTATCCCACCAAGTGGGAT+CGG | - | chr8.2:78591087-78591106 | None:intergenic | 50.0% | |
| CTTCCGGGAACCTTATCAAC+TGG | + | chr8.2:78592624-78592643 | MS.gene36741:CDS | 50.0% | |
| CTTTCTGCAGCTGGTATCGT+GGG | + | chr8.2:78594162-78594181 | MS.gene36741:CDS | 50.0% | |
| GACACTAAACACGTCACCAC+TGG | + | chr8.2:78591132-78591151 | MS.gene36741:intron | 50.0% | |
| GACGTGTTTAGTGTCGTGTC+CGG | - | chr8.2:78591127-78591146 | None:intergenic | 50.0% | |
| GATACAGTCGGGACATTAGC+TGG | + | chr8.2:78592966-78592985 | MS.gene36741:CDS | 50.0% | |
| GATACCATCACCAATGGCGA+GGG | + | chr8.2:78594207-78594226 | MS.gene36741:CDS | 50.0% | |
| GGTTCCTCCAGGTAGAAAGA+GGG | + | chr8.2:78592556-78592575 | MS.gene36741:CDS | 50.0% | |
| GTCCCGACCATCAAATTTGG+AGG | - | chr8.2:78592300-78592319 | None:intergenic | 50.0% | |
| TATAGCCGATCCCACTTGGT+GGG | + | chr8.2:78591079-78591098 | MS.gene36741:intron | 50.0% | |
| TCCCTCTCTGTTTAGGAACG+AGG | + | chr8.2:78592164-78592183 | MS.gene36741:intron | 50.0% | |
| TCTTTCTGCAGCTGGTATCG+TGG | + | chr8.2:78594161-78594180 | MS.gene36741:CDS | 50.0% | |
| TGATGCATGGCAGACATGTC+AGG | - | chr8.2:78593865-78593884 | None:intergenic | 50.0% | |
| TGGAGGCCGACATACAAACA+AGG | + | chr8.2:78592986-78593005 | MS.gene36741:CDS | 50.0% | |
| TTCGTATAGCCGATCCCACT+TGG | + | chr8.2:78591075-78591094 | MS.gene36741:intron | 50.0% | |
| ! | CAAAGCCTTATCCCACCAAG+TGG | - | chr8.2:78591093-78591112 | None:intergenic | 50.0% |
| ! | CACCTTTCTCACTTCTAGGG+AGG | - | chr8.2:78594100-78594119 | None:intergenic | 50.0% |
| ! | CACGAAAGTTGGTTCCTCCA+AGG | - | chr8.2:78592212-78592231 | None:intergenic | 50.0% |
| !!! | GGCAAATCACCGTGCCATTT+TGG | - | chr8.2:78593080-78593099 | None:intergenic | 50.0% |
| ACAGTCGGGACATTAGCTGG+AGG | + | chr8.2:78592969-78592988 | MS.gene36741:CDS | 55.0% | |
| AGCGGACGAGTCATGATGCA+TGG | - | chr8.2:78593878-78593897 | None:intergenic | 55.0% | |
| AGCTCCCTCTTTCTACCTGG+AGG | - | chr8.2:78592563-78592582 | None:intergenic | 55.0% | |
| CCAGGTAGAAAGAGGGAGCT+AGG | + | chr8.2:78592563-78592582 | MS.gene36741:CDS | 55.0% | |
| CCTAGCTCCCTCTTTCTACC+TGG | - | chr8.2:78592566-78592585 | None:intergenic | 55.0% | |
| CGGAACAAATGCAGCGTACG+TGG | + | chr8.2:78593037-78593056 | MS.gene36741:CDS | 55.0% | |
| CTGCAGAAAGACGAGCACCA+CGG | - | chr8.2:78594152-78594171 | None:intergenic | 55.0% | |
| GGCAGAGGAGCTAGCAGAAA+AGG | - | chr8.2:78593536-78593555 | None:intergenic | 55.0% | |
| GGTTGCTGATGCAATGACGG+TGG | + | chr8.2:78590860-78590879 | MS.gene36741:CDS | 55.0% | |
| GTATAGCCGATCCCACTTGG+TGG | + | chr8.2:78591078-78591097 | MS.gene36741:intron | 55.0% | |
| TGCAGAAAGACGAGCACCAC+GGG | - | chr8.2:78594151-78594170 | None:intergenic | 55.0% | |
| TGCGACGGTGATAGGAGCAA+CGG | + | chr8.2:78590710-78590729 | MS.gene36741:CDS | 55.0% | |
| ! | ACGTGTGCAACTTGGTGGCA+AGG | + | chr8.2:78592236-78592255 | MS.gene36741:CDS | 55.0% |
| ! | CACGGTGATTTGCCCAAGTC+TGG | + | chr8.2:78593086-78593105 | MS.gene36741:CDS | 55.0% |
| ! | CGATCCCACTTGGTGGGATA+AGG | + | chr8.2:78591085-78591104 | MS.gene36741:intron | 55.0% |
| ! | GTGCAACTTGGTGGCAAGGA+TGG | + | chr8.2:78592240-78592259 | MS.gene36741:CDS | 55.0% |
| !! | CACGCTGGTCTTGCTTCTGA+TGG | + | chr8.2:78590888-78590907 | MS.gene36741:CDS | 55.0% |
| !! | GCTGGTCTTGCTTCTGATGG+TGG | + | chr8.2:78590891-78590910 | MS.gene36741:CDS | 55.0% |
| ATGACGGTGGAGATGCACGC+TGG | + | chr8.2:78590873-78590892 | MS.gene36741:CDS | 60.0% | |
| CTCGTCCGCTGATCTCAACG+TGG | + | chr8.2:78593888-78593907 | MS.gene36741:CDS | 60.0% | |
| CTGACCCTCGCCATTGGTGA+TGG | - | chr8.2:78594214-78594233 | None:intergenic | 60.0% | |
| GACGGTGATAGGAGCAACGG+CGG | + | chr8.2:78590713-78590732 | MS.gene36741:CDS | 60.0% | |
| GGTGCTCGTCTTTCTGCAGC+TGG | + | chr8.2:78594153-78594172 | MS.gene36741:CDS | 60.0% | |
| ! | AAAGGTGGTGGCGTGTGCGA+CGG | + | chr8.2:78590695-78590714 | MS.gene36741:CDS | 60.0% |
| GTGGCGTGTGCGACGGTGAT+AGG | + | chr8.2:78590702-78590721 | MS.gene36741:CDS | 65.0% | |
| AGCAACGGCGGCGTGTGTGG+TGG | + | chr8.2:78590725-78590744 | MS.gene36741:CDS | 70.0% | |
| AGGAGCAACGGCGGCGTGTG+TGG | + | chr8.2:78590722-78590741 | MS.gene36741:CDS | 70.0% | |
| ! | GGCGGCGTGTGTGGTGGCGA+CGG | + | chr8.2:78590731-78590750 | MS.gene36741:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 78590690 | 78594425 | 78590690 | ID=MS.gene36741 |
| chr8.2 | mRNA | 78590690 | 78594425 | 78590690 | ID=MS.gene36741.t1;Parent=MS.gene36741 |
| chr8.2 | exon | 78590690 | 78590961 | 78590690 | ID=MS.gene36741.t1.exon1;Parent=MS.gene36741.t1 |
| chr8.2 | CDS | 78590690 | 78590961 | 78590690 | ID=cds.MS.gene36741.t1;Parent=MS.gene36741.t1 |
| chr8.2 | exon | 78592179 | 78592326 | 78592179 | ID=MS.gene36741.t1.exon2;Parent=MS.gene36741.t1 |
| chr8.2 | CDS | 78592179 | 78592326 | 78592179 | ID=cds.MS.gene36741.t1;Parent=MS.gene36741.t1 |
| chr8.2 | exon | 78592491 | 78592673 | 78592491 | ID=MS.gene36741.t1.exon3;Parent=MS.gene36741.t1 |
| chr8.2 | CDS | 78592491 | 78592673 | 78592491 | ID=cds.MS.gene36741.t1;Parent=MS.gene36741.t1 |
| chr8.2 | exon | 78592768 | 78592842 | 78592768 | ID=MS.gene36741.t1.exon4;Parent=MS.gene36741.t1 |
| chr8.2 | CDS | 78592768 | 78592842 | 78592768 | ID=cds.MS.gene36741.t1;Parent=MS.gene36741.t1 |
| chr8.2 | exon | 78592960 | 78593115 | 78592960 | ID=MS.gene36741.t1.exon5;Parent=MS.gene36741.t1 |
| chr8.2 | CDS | 78592960 | 78593115 | 78592960 | ID=cds.MS.gene36741.t1;Parent=MS.gene36741.t1 |
| chr8.2 | exon | 78593205 | 78593303 | 78593205 | ID=MS.gene36741.t1.exon6;Parent=MS.gene36741.t1 |
| chr8.2 | CDS | 78593205 | 78593303 | 78593205 | ID=cds.MS.gene36741.t1;Parent=MS.gene36741.t1 |
| chr8.2 | exon | 78593389 | 78593519 | 78593389 | ID=MS.gene36741.t1.exon7;Parent=MS.gene36741.t1 |
| chr8.2 | CDS | 78593389 | 78593519 | 78593389 | ID=cds.MS.gene36741.t1;Parent=MS.gene36741.t1 |
| chr8.2 | exon | 78593858 | 78593939 | 78593858 | ID=MS.gene36741.t1.exon8;Parent=MS.gene36741.t1 |
| chr8.2 | CDS | 78593858 | 78593939 | 78593858 | ID=cds.MS.gene36741.t1;Parent=MS.gene36741.t1 |
| chr8.2 | exon | 78594087 | 78594425 | 78594087 | ID=MS.gene36741.t1.exon9;Parent=MS.gene36741.t1 |
| chr8.2 | CDS | 78594087 | 78594425 | 78594087 | ID=cds.MS.gene36741.t1;Parent=MS.gene36741.t1 |
| Gene Sequence |
| Protein sequence |
