Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38716.t1 | XP_003603037.2 | 94.7 | 817 | 43 | 0 | 111 | 927 | 131 | 947 | 1.90E-235 | 825.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38716.t1 | O48724 | 75.5 | 661 | 151 | 3 | 264 | 924 | 158 | 807 | 9.1e-77 | 290.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38716.t1 | G7J6D1 | 94.7 | 817 | 43 | 0 | 111 | 927 | 131 | 947 | 1.4e-235 | 825.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049499 | MS.gene38716 | 0.823319 | 1.48E-53 | -1.69E-46 |
| MS.gene049744 | MS.gene38716 | 0.805711 | 1.17E-49 | -1.69E-46 |
| MS.gene049801 | MS.gene38716 | 0.849208 | 3.75E-60 | -1.69E-46 |
| MS.gene049983 | MS.gene38716 | 0.821178 | 4.64E-53 | -1.69E-46 |
| MS.gene050414 | MS.gene38716 | 0.800505 | 1.40E-48 | -1.69E-46 |
| MS.gene050654 | MS.gene38716 | 0.830919 | 2.24E-55 | -1.69E-46 |
| MS.gene051209 | MS.gene38716 | 0.83138 | 1.72E-55 | -1.69E-46 |
| MS.gene051541 | MS.gene38716 | 0.806148 | 9.47E-50 | -1.69E-46 |
| MS.gene051800 | MS.gene38716 | 0.828082 | 1.10E-54 | -1.69E-46 |
| MS.gene051823 | MS.gene38716 | 0.810479 | 1.13E-50 | -1.69E-46 |
| MS.gene052037 | MS.gene38716 | 0.804378 | 2.22E-49 | -1.69E-46 |
| MS.gene052118 | MS.gene38716 | 0.820737 | 5.86E-53 | -1.69E-46 |
| MS.gene052674 | MS.gene38716 | 0.806584 | 7.66E-50 | -1.69E-46 |
| MS.gene052675 | MS.gene38716 | 0.808681 | 2.75E-50 | -1.69E-46 |
| MS.gene052677 | MS.gene38716 | 0.812589 | 3.93E-51 | -1.69E-46 |
| MS.gene053486 | MS.gene38716 | 0.830208 | 3.34E-55 | -1.69E-46 |
| MS.gene054489 | MS.gene38716 | 0.812355 | 4.42E-51 | -1.69E-46 |
| MS.gene054641 | MS.gene38716 | 0.966758 | 2.38E-126 | -1.69E-46 |
| MS.gene054892 | MS.gene38716 | 0.813939 | 1.99E-51 | -1.69E-46 |
| MS.gene054893 | MS.gene38716 | 0.81411 | 1.82E-51 | -1.69E-46 |
| MS.gene055864 | MS.gene38716 | 0.843681 | 1.21E-58 | -1.69E-46 |
| MS.gene05686 | MS.gene38716 | 0.811255 | 7.67E-51 | -1.69E-46 |
| MS.gene058289 | MS.gene38716 | 0.834893 | 2.30E-56 | -1.69E-46 |
| MS.gene058429 | MS.gene38716 | 0.831537 | 1.58E-55 | -1.69E-46 |
| MS.gene060435 | MS.gene38716 | 0.848684 | 5.24E-60 | -1.69E-46 |
| MS.gene060522 | MS.gene38716 | 0.808629 | 2.82E-50 | -1.69E-46 |
| MS.gene06052 | MS.gene38716 | 0.831914 | 1.27E-55 | -1.69E-46 |
| MS.gene060777 | MS.gene38716 | 0.816178 | 6.32E-52 | -1.69E-46 |
| MS.gene060785 | MS.gene38716 | 0.867712 | 1.12E-65 | -1.69E-46 |
| MS.gene060932 | MS.gene38716 | 0.827028 | 1.96E-54 | -1.69E-46 |
| MS.gene060933 | MS.gene38716 | 0.832865 | 7.41E-56 | -1.69E-46 |
| MS.gene060937 | MS.gene38716 | 0.807413 | 5.12E-50 | -1.69E-46 |
| MS.gene06121 | MS.gene38716 | 0.800794 | 1.22E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38716.t1 | MTR_3g101660 | 95.143 | 947 | 26 | 1 | 1 | 927 | 1 | 947 | 0.0 | 1776 |
| MS.gene38716.t1 | MTR_1g019490 | 65.927 | 766 | 237 | 7 | 173 | 927 | 167 | 919 | 0.0 | 904 |
| MS.gene38716.t1 | MTR_8g070840 | 51.836 | 681 | 266 | 13 | 256 | 925 | 6 | 635 | 1.69e-170 | 511 |
| MS.gene38716.t1 | MTR_3g060660 | 29.412 | 595 | 386 | 8 | 249 | 836 | 4 | 571 | 1.47e-33 | 138 |
| MS.gene38716.t1 | MTR_2g027130 | 28.718 | 585 | 349 | 14 | 271 | 831 | 22 | 562 | 2.37e-26 | 115 |
| MS.gene38716.t1 | MTR_7g072550 | 30.686 | 277 | 188 | 2 | 575 | 851 | 177 | 449 | 5.06e-26 | 114 |
| MS.gene38716.t1 | MTR_4g029090 | 33.712 | 264 | 170 | 2 | 574 | 836 | 164 | 423 | 7.74e-26 | 113 |
| MS.gene38716.t1 | MTR_3g060660 | 28.679 | 530 | 352 | 7 | 308 | 836 | 56 | 560 | 1.61e-23 | 107 |
| MS.gene38716.t1 | MTR_5g096080 | 28.892 | 668 | 414 | 16 | 269 | 921 | 21 | 642 | 4.43e-23 | 105 |
| MS.gene38716.t1 | MTR_3g007920 | 29.630 | 594 | 373 | 13 | 269 | 846 | 21 | 585 | 6.88e-20 | 95.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38716.t1 | AT2G26570 | 67.162 | 673 | 210 | 3 | 252 | 924 | 146 | 807 | 0.0 | 837 |
| MS.gene38716.t1 | AT2G26570 | 67.162 | 673 | 210 | 3 | 252 | 924 | 146 | 807 | 0.0 | 837 |
| MS.gene38716.t1 | AT4G33390 | 60.909 | 660 | 227 | 6 | 264 | 922 | 149 | 778 | 0.0 | 692 |
| MS.gene38716.t1 | AT5G42880 | 48.669 | 676 | 304 | 7 | 251 | 925 | 118 | 751 | 1.77e-175 | 528 |
| MS.gene38716.t1 | AT1G45545 | 47.754 | 668 | 268 | 10 | 270 | 925 | 155 | 753 | 8.33e-169 | 510 |
| MS.gene38716.t1 | AT1G45545 | 47.754 | 668 | 268 | 10 | 270 | 925 | 154 | 752 | 8.71e-169 | 510 |
| MS.gene38716.t1 | AT5G55860 | 27.697 | 686 | 423 | 15 | 253 | 922 | 6 | 634 | 2.92e-21 | 99.8 |
| MS.gene38716.t1 | AT2G38370 | 27.864 | 323 | 200 | 5 | 519 | 841 | 113 | 402 | 3.15e-15 | 80.1 |
| MS.gene38716.t1 | AT2G38370 | 27.864 | 323 | 200 | 5 | 519 | 841 | 96 | 385 | 6.06e-15 | 79.3 |
| MS.gene38716.t1 | AT1G12150 | 23.902 | 569 | 378 | 8 | 269 | 829 | 19 | 540 | 6.90e-11 | 66.6 |
| MS.gene38716.t1 | AT1G12150 | 23.902 | 569 | 378 | 8 | 269 | 829 | 19 | 540 | 6.90e-11 | 66.6 |
Find 171 sgRNAs with CRISPR-Local
Find 338 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACCTCCTCAAGTTCCTTTC+TGG | 0.088150 | 3.3:-84183956 | None:intergenic |
| AGCTAAATTAACTGTTTATA+TGG | 0.204674 | 3.3:+84183831 | MS.gene38716:CDS |
| AACAAGCGACCAGCTAAATT+TGG | 0.239282 | 3.3:+84180957 | MS.gene38716:CDS |
| CAGTGGGGTTACACTTTCTT+TGG | 0.239820 | 3.3:+84184464 | MS.gene38716:CDS |
| GCTGTTAGTTGCAGCTTCTT+TGG | 0.261793 | 3.3:-84184210 | None:intergenic |
| CACTGACTTCTCTACTTCCT+TGG | 0.274617 | 3.3:-84183566 | None:intergenic |
| AAGGAAGCTGTTTCTAAGTT+TGG | 0.278467 | 3.3:+84181225 | MS.gene38716:CDS |
| AAGTTCGGTCATTTGTTCTT+TGG | 0.298214 | 3.3:-84184187 | None:intergenic |
| CGGAGAAAGGCTGGTGAGTC+TGG | 0.309159 | 3.3:+84184744 | MS.gene38716:CDS |
| TTTGGCAACACTGATAATTC+AGG | 0.310576 | 3.3:-84180844 | None:intergenic |
| GAGATCAAGATTCACTCAAT+TGG | 0.319924 | 3.3:+84183692 | MS.gene38716:CDS |
| TACATCAACCTGCTTGGTTT+GGG | 0.329348 | 3.3:-84181160 | None:intergenic |
| TTACATCAACCTGCTTGGTT+TGG | 0.331984 | 3.3:-84181161 | None:intergenic |
| TGCATCTCTAGAAGCTGAAT+TGG | 0.337620 | 3.3:+84184116 | MS.gene38716:CDS |
| CTCTGACCAGCATGAATTGC+AGG | 0.342985 | 3.3:+84181014 | MS.gene38716:CDS |
| AATGAAGTAAAGATGTCTTC+TGG | 0.344172 | 3.3:+84181120 | MS.gene38716:CDS |
| AAGGCAAAGGAAGGTAAATT+AGG | 0.350324 | 3.3:+84184678 | MS.gene38716:CDS |
| CGTTGCAGCCAAGGCACAAC+TGG | 0.354618 | 3.3:+84183399 | MS.gene38716:CDS |
| AACAGCTGAAGAGGCTAATC+AGG | 0.354780 | 3.3:+84184227 | MS.gene38716:CDS |
| TCTCCGTTACTAAGTGGAAT+TGG | 0.361118 | 3.3:-84180784 | None:intergenic |
| ACATTTGCTCATTGATTCTC+TGG | 0.363605 | 3.3:-84183747 | None:intergenic |
| GTCACATCCACTGTATCATT+TGG | 0.367014 | 3.3:-84180931 | None:intergenic |
| GTGCAGGATTAGTTGCATAC+TGG | 0.374116 | 3.3:-84184845 | None:intergenic |
| CTTCAGTTTGTGCTCTCTCT+AGG | 0.384605 | 3.3:-84183297 | None:intergenic |
| TAACTCTTCTATAAGTCTCT+TGG | 0.385789 | 3.3:-84183266 | None:intergenic |
| AAAGGATCTCAAATCTAAAC+TGG | 0.393667 | 3.3:+84183777 | MS.gene38716:CDS |
| TGCTGGTCAGAGATATCTTC+TGG | 0.394578 | 3.3:-84181003 | None:intergenic |
| TTGCAGCTTCTTTGGAAGTT+CGG | 0.399807 | 3.3:-84184202 | None:intergenic |
| AGCACAAACTGAAGAGCAAC+AGG | 0.400039 | 3.3:+84183306 | MS.gene38716:CDS |
| AGCAGCTGCAATCCTTGTAT+TGG | 0.408027 | 3.3:-84184535 | None:intergenic |
| TCTTCAATATGTTCTGTTAG+TGG | 0.408748 | 3.3:-84180445 | None:intergenic |
| AGCAACTTCCAGTTGTGCCT+TGG | 0.410573 | 3.3:-84183407 | None:intergenic |
| GTTTGACCATCAGAAACATT+TGG | 0.415469 | 3.3:-84180862 | None:intergenic |
| AATAGCTTTGGTTCAAATGA+AGG | 0.419296 | 3.3:+84184155 | MS.gene38716:CDS |
| AAAACACATTCAAACAAGTC+AGG | 0.424040 | 3.3:+84184999 | MS.gene38716:CDS |
| CAGGTTACTTGCAGCTCAAA+AGG | 0.424256 | 3.3:+84184341 | MS.gene38716:CDS |
| ATAGAGAGATAGCTGCTAGA+AGG | 0.425984 | 3.3:+84184622 | MS.gene38716:CDS |
| TCTGCATGCATATAAGTCTT+CGG | 0.426670 | 3.3:-84184882 | None:intergenic |
| CAAGGTACTTACTCCAGCCT+TGG | 0.427633 | 3.3:-84184313 | None:intergenic |
| GACTGCTCATGCTGCACACT+TGG | 0.430032 | 3.3:+84183633 | MS.gene38716:CDS |
| TTGGGAGAAGGAACTTAAAC+AGG | 0.433707 | 3.3:+84183711 | MS.gene38716:CDS |
| AATCTTCAACCAAATTTAGC+TGG | 0.435466 | 3.3:-84180966 | None:intergenic |
| TGCAAAGGCTTCTGAAAAGT+TGG | 0.447891 | 3.3:+84184374 | MS.gene38716:CDS |
| TTCCTTTCTGGCTGATTCCA+CGG | 0.450504 | 3.3:-84183944 | None:intergenic |
| TATTCTGGTTAACCACTCCT+TGG | 0.457248 | 3.3:-84184767 | None:intergenic |
| AGTTGCTAAAGCTAGGTATA+CGG | 0.460121 | 3.3:+84183423 | MS.gene38716:CDS |
| CGAATCTAGCGTTGCAGCCA+AGG | 0.460134 | 3.3:+84183390 | MS.gene38716:CDS |
| GACTAGATCAGAAATAGCTT+TGG | 0.461244 | 3.3:+84184143 | MS.gene38716:CDS |
| AGATCAAGATTCACTCAATT+GGG | 0.461638 | 3.3:+84183693 | MS.gene38716:CDS |
| ACTGAAATCCTTCGAGAAGT+TGG | 0.462011 | 3.3:+84184590 | MS.gene38716:CDS |
| TGCAGGATTAGTTGCATACT+GGG | 0.468145 | 3.3:-84184844 | None:intergenic |
| GTGTAGAACAAGAACTTAGA+AGG | 0.477088 | 3.3:+84184700 | MS.gene38716:CDS |
| AATCATCTCTTGCCTCGATT+AGG | 0.477119 | 3.3:+84184064 | MS.gene38716:CDS |
| GAAGCTGTTTCTAAGTTTGG+AGG | 0.479133 | 3.3:+84181228 | MS.gene38716:CDS |
| ATCAACCTGCTTGGTTTGGG+CGG | 0.480255 | 3.3:-84181157 | None:intergenic |
| GAAGCAGAACAAGCCAAGGC+TGG | 0.481127 | 3.3:+84184300 | MS.gene38716:CDS |
| GAGGCGCAATCTAGTAGAAC+AGG | 0.482497 | 3.3:+84183147 | MS.gene38716:intron |
| TACATCTTTAAAATCAGAAC+TGG | 0.483592 | 3.3:+84184032 | MS.gene38716:CDS |
| TTCTGAAGTTGAGGTAGCTA+AGG | 0.484672 | 3.3:+84184560 | MS.gene38716:CDS |
| TGAAAATGAGCAACGGAGAA+AGG | 0.485253 | 3.3:+84184731 | MS.gene38716:CDS |
| GAGTAAGTACCTTGGAAAGC+AGG | 0.485484 | 3.3:+84184322 | MS.gene38716:CDS |
| TGAAGAGCAACAGGCAAGAC+AGG | 0.487822 | 3.3:+84183315 | MS.gene38716:CDS |
| ACATATATACCTCCACAGTC+TGG | 0.487953 | 3.3:-84181278 | None:intergenic |
| TCTAAACTGGAAGCAGCCTC+TGG | 0.489857 | 3.3:+84183790 | MS.gene38716:CDS |
| GGACTTGACAAATATTGTGC+AGG | 0.492349 | 3.3:-84184861 | None:intergenic |
| TGCAGCTCAAAAGGAGATAG+AGG | 0.495277 | 3.3:+84184350 | MS.gene38716:CDS |
| AAATCAAGTACTAAAGGAGC+TGG | 0.502391 | 3.3:+84183237 | MS.gene38716:CDS |
| AGTAACGGAGAAGTGGAGTC+TGG | 0.504133 | 3.3:+84180796 | MS.gene38716:CDS |
| TAGAGAGATAGCTGCTAGAA+GGG | 0.509873 | 3.3:+84184623 | MS.gene38716:CDS |
| TCAACCTGCTTGGTTTGGGC+GGG | 0.510437 | 3.3:-84181156 | None:intergenic |
| TTCATCTCTATCAGTCACTA+AGG | 0.513821 | 3.3:-84183509 | None:intergenic |
| GGAGGCAGTTACAGCATCCA+AGG | 0.516525 | 3.3:+84183549 | MS.gene38716:CDS |
| CAGAAGAGCGAGCCAATACA+AGG | 0.517906 | 3.3:+84184523 | MS.gene38716:CDS |
| AATGAGCAACGGAGAAAGGC+TGG | 0.523536 | 3.3:+84184735 | MS.gene38716:CDS |
| GAAGCAGAGGAACAAAGAAT+AGG | 0.523697 | 3.3:+84183655 | MS.gene38716:CDS |
| TTGGTTGAAGATTCTAAACC+AGG | 0.523832 | 3.3:+84180976 | MS.gene38716:CDS |
| TGCTGCACACTTGGAAGCAG+AGG | 0.524988 | 3.3:+84183642 | MS.gene38716:CDS |
| TGGAGGAATTGTCGATTGGA+AGG | 0.530992 | 3.3:+84181245 | MS.gene38716:CDS |
| GAGATATCTTCTGGAGCACC+TGG | 0.532106 | 3.3:-84180994 | None:intergenic |
| AGTTACTGAAGAGACACATA+TGG | 0.533215 | 3.3:+84180567 | MS.gene38716:CDS |
| AGCAGCTGTGAAAGAAGAGC+TGG | 0.533861 | 3.3:+84183462 | MS.gene38716:CDS |
| TCCACTTCTCCGTTACTAAG+TGG | 0.535969 | 3.3:-84180790 | None:intergenic |
| TTGGCAACACTGATAATTCA+GGG | 0.536150 | 3.3:-84180843 | None:intergenic |
| ATGTGGTGGGTTTACCACTT+CGG | 0.537990 | 3.3:-84180740 | None:intergenic |
| GAAGAAATCGTTGTTCCCAC+GGG | 0.541661 | 3.3:+84184953 | MS.gene38716:CDS |
| AGGAAGATTGATTATGTGGT+GGG | 0.543145 | 3.3:-84180753 | None:intergenic |
| AGAAGAAATCGTTGTTCCCA+CGG | 0.544605 | 3.3:+84184952 | MS.gene38716:CDS |
| CACTTCATCCAACTTCTCGA+AGG | 0.544839 | 3.3:-84184598 | None:intergenic |
| AGCTGCTAATTCTGAAGTTG+AGG | 0.545403 | 3.3:+84184551 | MS.gene38716:CDS |
| AGCCGTGGAATCAGCCAGAA+AGG | 0.546535 | 3.3:+84183942 | MS.gene38716:CDS |
| TCTGAGGAAGATTGATTATG+TGG | 0.549334 | 3.3:-84180757 | None:intergenic |
| TCCTTGACAGATTCGAATGG+AGG | 0.549570 | 3.3:-84181207 | None:intergenic |
| GGATGCTGTAACTGCCTCCT+CGG | 0.551757 | 3.3:-84183545 | None:intergenic |
| ATGAAGTGGACCCGTCCAGT+GGG | 0.555823 | 3.3:+84184448 | MS.gene38716:CDS |
| GCAACAGGCAAGACAGGACT+CGG | 0.556999 | 3.3:+84183321 | MS.gene38716:CDS |
| AAAGTGTAACCCCACTGGAC+GGG | 0.558997 | 3.3:-84184458 | None:intergenic |
| AGTTTGGAGGAATTGTCGAT+TGG | 0.559426 | 3.3:+84181241 | MS.gene38716:CDS |
| TGAGCAAATGTTGTCTGCAA+AGG | 0.559704 | 3.3:+84183759 | MS.gene38716:CDS |
| TCCACTTAGTAACGGAGAAG+TGG | 0.562086 | 3.3:+84180789 | MS.gene38716:CDS |
| GATTAGTTGCATACTGGGAC+CGG | 0.562727 | 3.3:-84184839 | None:intergenic |
| TGAAGAGGATTCAGAATCAG+AGG | 0.565843 | 3.3:-84180542 | None:intergenic |
| TGAAGAACTGCAGAAAGTAA+AGG | 0.567540 | 3.3:+84184275 | MS.gene38716:CDS |
| GATTAGGCAAAGAGAGGGAA+TGG | 0.573233 | 3.3:+84184080 | MS.gene38716:CDS |
| TAGAAGGGAATCCTTGAAGA+TGG | 0.574172 | 3.3:+84184638 | MS.gene38716:CDS |
| AGATGAAGGTGGATCATCAC+CGG | 0.581928 | 3.3:+84184908 | MS.gene38716:CDS |
| TAGAGATGCAACTGCAATGG+AGG | 0.583713 | 3.3:-84184103 | None:intergenic |
| AGCTGCTTGAGCAAGCAAGT+TGG | 0.584333 | 3.3:-84184250 | None:intergenic |
| GAAGAGGATTCAGAATCAGA+GGG | 0.585481 | 3.3:-84180541 | None:intergenic |
| AATTTCTGAAGAGACGCCAC+TGG | 0.586404 | 3.3:+84180633 | MS.gene38716:CDS |
| CAAAGAAAGTGTAACCCCAC+TGG | 0.586929 | 3.3:-84184463 | None:intergenic |
| CACAGATATACAAGCAGCCG+TGG | 0.587150 | 3.3:+84183927 | MS.gene38716:CDS |
| TGCAAGTAACCTGCTTTCCA+AGG | 0.587944 | 3.3:-84184331 | None:intergenic |
| GCTGCAACTAACAGCTGAAG+AGG | 0.588648 | 3.3:+84184218 | MS.gene38716:CDS |
| AGAGCTGGATGCATTGCGTA+AGG | 0.589983 | 3.3:+84183477 | MS.gene38716:CDS |
| CTCACCCGCCCAAACCAAGC+AGG | 0.590022 | 3.3:+84181152 | MS.gene38716:CDS |
| CATCAACCTGCAATTCATGC+TGG | 0.590549 | 3.3:-84181020 | None:intergenic |
| TCTTCAACATGTTCTGCTAG+TGG | 0.593335 | 3.3:-84180511 | None:intergenic |
| GAATCAAAGTTAAAGCAAGA+AGG | 0.593429 | 3.3:+84183853 | MS.gene38716:CDS |
| GGCAGAAGCAGAACAAGCCA+AGG | 0.593446 | 3.3:+84184296 | MS.gene38716:CDS |
| TTAACCAGAATAAAAGCCCC+AGG | 0.593700 | 3.3:+84184778 | MS.gene38716:CDS |
| TCTTCAACATGTTCTGCCAG+TGG | 0.594746 | 3.3:-84180649 | None:intergenic |
| AGTTACTGAGACACAACTGA+TGG | 0.596510 | 3.3:+84180699 | MS.gene38716:CDS |
| GGAATCCTTGAAGATGGCAA+TGG | 0.598116 | 3.3:+84184644 | MS.gene38716:CDS |
| AAAGGAGATAGAGGCTGCAA+AGG | 0.598223 | 3.3:+84184359 | MS.gene38716:CDS |
| TCAAACTATAATACAAGATG+AGG | 0.599392 | 3.3:+84180879 | MS.gene38716:CDS |
| TTCTAGAGATGCAACTGCAA+TGG | 0.599491 | 3.3:-84184106 | None:intergenic |
| AAAGCTCAGAGTGGAAGAGA+TGG | 0.599941 | 3.3:+84183351 | MS.gene38716:CDS |
| TCCCTCTCTTTGCCTAATCG+AGG | 0.600136 | 3.3:-84184076 | None:intergenic |
| CTCTGAAGAAAATACCGAAG+TGG | 0.600805 | 3.3:+84180726 | MS.gene38716:CDS |
| AAGGCTGGTGAGTCTGGCCA+AGG | 0.604901 | 3.3:+84184750 | MS.gene38716:CDS |
| GAGGAAGATTGATTATGTGG+TGG | 0.606655 | 3.3:-84180754 | None:intergenic |
| AGATTCACTCAATTGGGAGA+AGG | 0.607074 | 3.3:+84183699 | MS.gene38716:CDS |
| CTTCCAATTCCACTTAGTAA+CGG | 0.607417 | 3.3:+84180781 | MS.gene38716:CDS |
| ATCAGCCAGAAAGGAACTTG+AGG | 0.607425 | 3.3:+84183951 | MS.gene38716:CDS |
| AATGAAGTGGACCCGTCCAG+TGG | 0.610356 | 3.3:+84184447 | MS.gene38716:CDS |
| AAACACATTCAAACAAGTCA+GGG | 0.611913 | 3.3:+84185000 | MS.gene38716:CDS |
| GCCTCGATTAGGCAAAGAGA+GGG | 0.612208 | 3.3:+84184075 | MS.gene38716:CDS |
| GAAAGTGTAACCCCACTGGA+CGG | 0.613134 | 3.3:-84184459 | None:intergenic |
| ACCTCCATTCGAATCTGTCA+AGG | 0.613789 | 3.3:+84181206 | MS.gene38716:CDS |
| ATACAGAAAACAAGCAGAGA+CGG | 0.617490 | 3.3:+84183201 | MS.gene38716:CDS |
| CAAGGCTGGAGTAAGTACCT+TGG | 0.617948 | 3.3:+84184314 | MS.gene38716:CDS |
| AGCCAGAAAGGAACTTGAGG+AGG | 0.622529 | 3.3:+84183954 | MS.gene38716:CDS |
| AAGTGGAATTGGAAGTTCTG+AGG | 0.622609 | 3.3:-84180773 | None:intergenic |
| TGGTGAGTCTGGCCAAGGAG+TGG | 0.623365 | 3.3:+84184755 | MS.gene38716:CDS |
| GCTTCCTTGACAGATTCGAA+TGG | 0.625828 | 3.3:-84181210 | None:intergenic |
| AACTGGAAGTTGCTAAAGCT+AGG | 0.628167 | 3.3:+84183416 | MS.gene38716:CDS |
| GCAAAGAACATCATAACCCG+TGG | 0.628232 | 3.3:-84184969 | None:intergenic |
| CAAGGAAGTAGAGAAGTCAG+TGG | 0.629489 | 3.3:+84183567 | MS.gene38716:CDS |
| GTGTTGCCAAATGTTTCTGA+TGG | 0.631392 | 3.3:+84180856 | MS.gene38716:CDS |
| GACAGATTCGAATGGAGGTG+TGG | 0.633110 | 3.3:-84181202 | None:intergenic |
| GCTTAGCAAACGAGCTCACG+AGG | 0.633240 | 3.3:+84184500 | MS.gene38716:CDS |
| ACAAAGAATAGGAACAGTCA+TGG | 0.635786 | 3.3:+84183666 | MS.gene38716:CDS |
| GGTGATGATGAACTCTCGCA+AGG | 0.637677 | 3.3:+84183874 | MS.gene38716:CDS |
| AGCTATTAAGAAAGCCGAGG+AGG | 0.640981 | 3.3:+84183531 | MS.gene38716:CDS |
| TAGAACAAGAACTTAGAAGG+TGG | 0.641248 | 3.3:+84184703 | MS.gene38716:CDS |
| AGAGTGGAAGAGATGGAGCA+AGG | 0.643532 | 3.3:+84183358 | MS.gene38716:CDS |
| AAAGCTGAGAAGGCAAAGGA+AGG | 0.644947 | 3.3:+84184669 | MS.gene38716:CDS |
| GGAGAGCTGAAAATGAGCAA+CGG | 0.649631 | 3.3:+84184724 | MS.gene38716:CDS |
| TGAAGCTATTAAGAAAGCCG+AGG | 0.649803 | 3.3:+84183528 | MS.gene38716:CDS |
| TGCCTCGATTAGGCAAAGAG+AGG | 0.651833 | 3.3:+84184074 | MS.gene38716:CDS |
| CAAATCAAGCAGCAAACCAG+AGG | 0.652776 | 3.3:-84183806 | None:intergenic |
| TCATCACCGGAATCAAAACA+TGG | 0.652989 | 3.3:+84184921 | MS.gene38716:CDS |
| GGCTCATCGAATCCAGACTG+TGG | 0.664456 | 3.3:+84181266 | MS.gene38716:CDS |
| GGAACTTGCAAAGCTCAGAG+TGG | 0.665822 | 3.3:+84183342 | MS.gene38716:CDS |
| CATAGAGAAAGCAAATGCTG+AGG | 0.667742 | 3.3:+84183987 | MS.gene38716:CDS |
| TTCAGTTCCAAATGATACAG+TGG | 0.670675 | 3.3:+84180924 | MS.gene38716:CDS |
| TCATCGAATCCAGACTGTGG+AGG | 0.679040 | 3.3:+84181269 | MS.gene38716:CDS |
| CAAAGAACATCATAACCCGT+GGG | 0.683684 | 3.3:-84184968 | None:intergenic |
| TAACCAGAATAAAAGCCCCA+GGG | 0.691189 | 3.3:+84184779 | MS.gene38716:CDS |
| GATGATGAACTCTCGCAAGG+AGG | 0.713634 | 3.3:+84183877 | MS.gene38716:CDS |
| TGAAGTGGACCCGTCCAGTG+GGG | 0.735490 | 3.3:+84184449 | MS.gene38716:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTGATATAGTTATAAAATTT+TGG | - | chr3.3:84182678-84182697 | None:intergenic | 10.0% |
| !! | AAAAATACTAGTAAAAGAAA+AGG | - | chr3.3:84181804-84181823 | None:intergenic | 15.0% |
| !! | TATCTAAAAATGTACTAAAA+CGG | + | chr3.3:84182146-84182165 | MS.gene38716:intron | 15.0% |
| !!! | AATTAGTAGTAACTTATTTT+TGG | - | chr3.3:84182555-84182574 | None:intergenic | 15.0% |
| !!! | ATTAGTAGTAACTTATTTTT+GGG | - | chr3.3:84182554-84182573 | None:intergenic | 15.0% |
| !! | AGCTAAATTAACTGTTTATA+TGG | + | chr3.3:84183831-84183850 | MS.gene38716:CDS | 20.0% |
| !! | AGTATCAATTTGATTATAAG+TGG | + | chr3.3:84181521-84181540 | MS.gene38716:intron | 20.0% |
| !! | ATCTAAAAATGTACTAAAAC+GGG | + | chr3.3:84182147-84182166 | MS.gene38716:intron | 20.0% |
| !! | ATCTAATATCACAAAATTAC+AGG | - | chr3.3:84181895-84181914 | None:intergenic | 20.0% |
| !! | ATGTAGCATATAATCAAAAT+TGG | + | chr3.3:84181708-84181727 | MS.gene38716:intron | 20.0% |
| !! | GATACTAATTGTAAAATACA+AGG | + | chr3.3:84182865-84182884 | MS.gene38716:intron | 20.0% |
| !! | GCTTATACAATATCTATTAA+AGG | + | chr3.3:84181443-84181462 | MS.gene38716:intron | 20.0% |
| !! | TACAATATCTATTAAAGGAT+AGG | + | chr3.3:84181448-84181467 | MS.gene38716:intron | 20.0% |
| !! | TAGATAAAGAAAAATTTGAG+TGG | - | chr3.3:84182132-84182151 | None:intergenic | 20.0% |
| !! | TGAAAAGAAATAAGAGTAAT+AGG | - | chr3.3:84181384-84181403 | None:intergenic | 20.0% |
| !!! | AATAAGTGCTTTTCTTTTAA+TGG | - | chr3.3:84182506-84182525 | None:intergenic | 20.0% |
| !!! | ATTACTCTTATTTCTTTTCA+AGG | + | chr3.3:84181384-84181403 | MS.gene38716:intron | 20.0% |
| !!! | GTATTTTTCTATCAATTTTC+TGG | + | chr3.3:84181816-84181835 | MS.gene38716:intron | 20.0% |
| !!! | TTCGTATATGAAAAAAGTAT+TGG | - | chr3.3:84182627-84182646 | None:intergenic | 20.0% |
| !!! | TTTTTTTCTTCTTTTCTTTC+TGG | + | chr3.3:84183117-84183136 | MS.gene38716:intron | 20.0% |
| ! | AAATAGAAGCAAAAATGAAG+TGG | + | chr3.3:84184434-84184453 | MS.gene38716:CDS | 25.0% |
| ! | ACGTGTCAAATTAATTATTC+TGG | + | chr3.3:84181746-84181765 | MS.gene38716:intron | 25.0% |
| ! | ATTACCACTATTATATATCC+TGG | + | chr3.3:84182572-84182591 | MS.gene38716:intron | 25.0% |
| ! | TCAAACTATAATACAAGATG+AGG | + | chr3.3:84180879-84180898 | MS.gene38716:CDS | 25.0% |
| ! | TCTAAAAATGTACTAAAACG+GGG | + | chr3.3:84182148-84182167 | MS.gene38716:intron | 25.0% |
| ! | TGTGTTACATCATATTAACT+AGG | + | chr3.3:84181928-84181947 | MS.gene38716:intron | 25.0% |
| ! | TGTTATTAGTCATATATCCT+AGG | + | chr3.3:84182408-84182427 | MS.gene38716:intron | 25.0% |
| ! | TTACCACTATTATATATCCT+GGG | + | chr3.3:84182573-84182592 | MS.gene38716:intron | 25.0% |
| ! | TTTCATTACCTTGCTTAAAA+CGG | - | chr3.3:84181972-84181991 | None:intergenic | 25.0% |
| !! | ATTTTGAACTGCAACAAATT+AGG | + | chr3.3:84182951-84182970 | MS.gene38716:intron | 25.0% |
| !! | TCTCTTCAGAAATTTTTGAA+GGG | - | chr3.3:84180627-84180646 | None:intergenic | 25.0% |
| !! | TTTTGAACTGCAACAAATTA+GGG | + | chr3.3:84182952-84182971 | MS.gene38716:intron | 25.0% |
| !!! | AGAGAATTAGGTTGAATATT+GGG | + | chr3.3:84181407-84181426 | MS.gene38716:intron | 25.0% |
| !!! | TAACTTATTTTTGGGTATAG+TGG | - | chr3.3:84182546-84182565 | None:intergenic | 25.0% |
| !!! | TACATCTTTAAAATCAGAAC+TGG | + | chr3.3:84184032-84184051 | MS.gene38716:CDS | 25.0% |
| !!! | TTTTTTCCATGTTTTGATTC+CGG | - | chr3.3:84184930-84184949 | None:intergenic | 25.0% |
| AAAACACATTCAAACAAGTC+AGG | + | chr3.3:84184999-84185018 | MS.gene38716:CDS | 30.0% | |
| AAAACCAAGGTAATCAAAAC+TGG | - | chr3.3:84182815-84182834 | None:intergenic | 30.0% | |
| AAAACCATAAACAGTTTCCT+TGG | - | chr3.3:84182914-84182933 | None:intergenic | 30.0% | |
| AAACACATTCAAACAAGTCA+GGG | + | chr3.3:84185000-84185019 | MS.gene38716:CDS | 30.0% | |
| AAACCATAAACAGTTTCCTT+GGG | - | chr3.3:84182913-84182932 | None:intergenic | 30.0% | |
| AAAGGATCTCAAATCTAAAC+TGG | + | chr3.3:84183777-84183796 | MS.gene38716:CDS | 30.0% | |
| AATCTTCAACCAAATTTAGC+TGG | - | chr3.3:84180969-84180988 | None:intergenic | 30.0% | |
| AATGAAGTAAAGATGTCTTC+TGG | + | chr3.3:84181120-84181139 | MS.gene38716:CDS | 30.0% | |
| ACAAGGAAACTATGATTGTA+TGG | + | chr3.3:84182882-84182901 | MS.gene38716:intron | 30.0% | |
| ACGTTTAACACTTAAAACCA+AGG | - | chr3.3:84182828-84182847 | None:intergenic | 30.0% | |
| AGATACTTTGCATCTCAATA+TGG | + | chr3.3:84182985-84183004 | MS.gene38716:intron | 30.0% | |
| AGATCAAGATTCACTCAATT+GGG | + | chr3.3:84183693-84183712 | MS.gene38716:CDS | 30.0% | |
| ATAATCTTAAGTGTCCTTCT+AGG | - | chr3.3:84182479-84182498 | None:intergenic | 30.0% | |
| GAATCAAAGTTAAAGCAAGA+AGG | + | chr3.3:84183853-84183872 | MS.gene38716:CDS | 30.0% | |
| GACGAAAAATCAAGTACTAA+AGG | + | chr3.3:84183231-84183250 | MS.gene38716:CDS | 30.0% | |
| GGTATTAACAAAAAGACACT+TGG | + | chr3.3:84182309-84182328 | MS.gene38716:intron | 30.0% | |
| TAACTCTTCTATAAGTCTCT+TGG | - | chr3.3:84183269-84183288 | None:intergenic | 30.0% | |
| TATTATATATCCTGGGAAGT+TGG | + | chr3.3:84182580-84182599 | MS.gene38716:intron | 30.0% | |
| TCTTCAATATGTTCTGTTAG+TGG | - | chr3.3:84180448-84180467 | None:intergenic | 30.0% | |
| TTAAGCAAGGTAATGAAAAC+CGG | + | chr3.3:84181974-84181993 | MS.gene38716:intron | 30.0% | |
| TTAGGCCTATAATATGACTT+TGG | - | chr3.3:84181618-84181637 | None:intergenic | 30.0% | |
| TTCTTTAACAAGAGAAAGAG+CGG | + | chr3.3:84182230-84182249 | MS.gene38716:intron | 30.0% | |
| ! | CATGCAAGTAATGTGTTATT+AGG | - | chr3.3:84181636-84181655 | None:intergenic | 30.0% |
| ! | GTCTCTTCAGAAATTTTTGA+AGG | - | chr3.3:84180628-84180647 | None:intergenic | 30.0% |
| ! | TTTTCTTTCTGGATATACAG+AGG | + | chr3.3:84183128-84183147 | MS.gene38716:intron | 30.0% |
| !! | AATAGCTTTGGTTCAAATGA+AGG | + | chr3.3:84184155-84184174 | MS.gene38716:CDS | 30.0% |
| !! | AGGAAGCAAATAATTTTGAC+CGG | + | chr3.3:84184820-84184839 | MS.gene38716:CDS | 30.0% |
| !! | CAAATCTTTTGTTTCAGAAG+AGG | - | chr3.3:84181088-84181107 | None:intergenic | 30.0% |
| !! | CTCTTCAGAAATTTTTGAAG+GGG | - | chr3.3:84180626-84180645 | None:intergenic | 30.0% |
| !! | GAACGTTTTATTACATCAGT+AGG | - | chr3.3:84183013-84183032 | None:intergenic | 30.0% |
| !! | GAGAATTAGGTTGAATATTG+GGG | + | chr3.3:84181408-84181427 | MS.gene38716:intron | 30.0% |
| !! | GAGAGAATTAGGTTGAATAT+TGG | + | chr3.3:84181406-84181425 | MS.gene38716:intron | 30.0% |
| !! | TTCTTTTCAAGGAGAGAATT+AGG | + | chr3.3:84181395-84181414 | MS.gene38716:intron | 30.0% |
| AAACCACTCTGTTGTTAAAC+CGG | + | chr3.3:84182049-84182068 | MS.gene38716:intron | 35.0% | |
| AAATCAAGTACTAAAGGAGC+TGG | + | chr3.3:84183237-84183256 | MS.gene38716:CDS | 35.0% | |
| AAGAGGCAAATGTTGTTATG+GGG | + | chr3.3:84181472-84181491 | MS.gene38716:intron | 35.0% | |
| AAGGCAAAGGAAGGTAAATT+AGG | + | chr3.3:84184678-84184697 | MS.gene38716:CDS | 35.0% | |
| AAGTTCGGTCATTTGTTCTT+TGG | - | chr3.3:84184190-84184209 | None:intergenic | 35.0% | |
| ACAAAGAATAGGAACAGTCA+TGG | + | chr3.3:84183666-84183685 | MS.gene38716:CDS | 35.0% | |
| AGAGAAGACATGTGAGAAAA+CGG | + | chr3.3:84182719-84182738 | MS.gene38716:intron | 35.0% | |
| AGGAAGATTGATTATGTGGT+GGG | - | chr3.3:84180756-84180775 | None:intergenic | 35.0% | |
| AGTTACTGAAGAGACACATA+TGG | + | chr3.3:84180567-84180586 | MS.gene38716:CDS | 35.0% | |
| AGTTGCTAAAGCTAGGTATA+CGG | + | chr3.3:84183423-84183442 | MS.gene38716:CDS | 35.0% | |
| ATACAGAAAACAAGCAGAGA+CGG | + | chr3.3:84183201-84183220 | MS.gene38716:CDS | 35.0% | |
| ATGCATGCAGAAAAAGATGA+AGG | + | chr3.3:84184894-84184913 | MS.gene38716:CDS | 35.0% | |
| CAAGAGGCAAATGTTGTTAT+GGG | + | chr3.3:84181471-84181490 | MS.gene38716:intron | 35.0% | |
| CTTCCAATTCCACTTAGTAA+CGG | + | chr3.3:84180781-84180800 | MS.gene38716:CDS | 35.0% | |
| CTTCCCAGGATATATAATAG+TGG | - | chr3.3:84182579-84182598 | None:intergenic | 35.0% | |
| GACTAGATCAGAAATAGCTT+TGG | + | chr3.3:84184143-84184162 | MS.gene38716:CDS | 35.0% | |
| GAGATCAAGATTCACTCAAT+TGG | + | chr3.3:84183692-84183711 | MS.gene38716:CDS | 35.0% | |
| GCAGTTCAAAATGCATTGTA+AGG | - | chr3.3:84182943-84182962 | None:intergenic | 35.0% | |
| GCCAACCAAAGTCATATTAT+AGG | + | chr3.3:84181610-84181629 | MS.gene38716:intron | 35.0% | |
| GCCTATAATATGACTTTGGT+TGG | - | chr3.3:84181614-84181633 | None:intergenic | 35.0% | |
| GTGTAGAACAAGAACTTAGA+AGG | + | chr3.3:84184700-84184719 | MS.gene38716:CDS | 35.0% | |
| GTTTGACCATCAGAAACATT+TGG | - | chr3.3:84180865-84180884 | None:intergenic | 35.0% | |
| TAGAACAAGAACTTAGAAGG+TGG | + | chr3.3:84184703-84184722 | MS.gene38716:CDS | 35.0% | |
| TCAAAATGCATTGTAAGGCA+AGG | - | chr3.3:84182938-84182957 | None:intergenic | 35.0% | |
| TCTATTAAAGGATAGGCAAG+AGG | + | chr3.3:84181455-84181474 | MS.gene38716:intron | 35.0% | |
| TCTGAGGAAGATTGATTATG+TGG | - | chr3.3:84180760-84180779 | None:intergenic | 35.0% | |
| TCTGCATGCATATAAGTCTT+CGG | - | chr3.3:84184885-84184904 | None:intergenic | 35.0% | |
| TCTTTAACAAGAGAAAGAGC+GGG | + | chr3.3:84182231-84182250 | MS.gene38716:intron | 35.0% | |
| TGAAGAACTGCAGAAAGTAA+AGG | + | chr3.3:84184275-84184294 | MS.gene38716:CDS | 35.0% | |
| TTCAGTTCCAAATGATACAG+TGG | + | chr3.3:84180924-84180943 | MS.gene38716:CDS | 35.0% | |
| TTCATCTCTATCAGTCACTA+AGG | - | chr3.3:84183512-84183531 | None:intergenic | 35.0% | |
| TTGGCAACACTGATAATTCA+GGG | - | chr3.3:84180846-84180865 | None:intergenic | 35.0% | |
| TTGGTTGAAGATTCTAAACC+AGG | + | chr3.3:84180976-84180995 | MS.gene38716:CDS | 35.0% | |
| TTTCCCAAGGAAACTGTTTA+TGG | + | chr3.3:84182907-84182926 | MS.gene38716:intron | 35.0% | |
| TTTGGCAACACTGATAATTC+AGG | - | chr3.3:84180847-84180866 | None:intergenic | 35.0% | |
| ! | AATTTTTGTAGAGGAGTCAG+AGG | - | chr3.3:84180413-84180432 | None:intergenic | 35.0% |
| ! | AGTCTCTAATGACTCTTTTG+TGG | - | chr3.3:84183617-84183636 | None:intergenic | 35.0% |
| ! | ATTTTTGTAGAGGAGTCAGA+GGG | - | chr3.3:84180412-84180431 | None:intergenic | 35.0% |
| ! | CTCTTCAGCAATTTTTGTAG+AGG | - | chr3.3:84180422-84180441 | None:intergenic | 35.0% |
| ! | GTTCTGCGTTTTCTTCTTAA+AGG | + | chr3.3:84182193-84182212 | MS.gene38716:intron | 35.0% |
| ! | TACCTTGCTTGATTTTCTGT+TGG | + | chr3.3:84183075-84183094 | MS.gene38716:intron | 35.0% |
| ! | TCTTTTTACATCAACCTGCT+TGG | - | chr3.3:84181169-84181188 | None:intergenic | 35.0% |
| ! | TGATTGTATGGTTTTTCCCA+AGG | + | chr3.3:84182894-84182913 | MS.gene38716:intron | 35.0% |
| ! | TTATGCAAGAAGTGTGAAGA+AGG | - | chr3.3:84181351-84181370 | None:intergenic | 35.0% |
| ! | TTTTTCCATTGCCATCTTCA+AGG | - | chr3.3:84184652-84184671 | None:intergenic | 35.0% |
| !! | AACTTTTGAAGAGGATTCAG+AGG | - | chr3.3:84180479-84180498 | None:intergenic | 35.0% |
| !! | AAGCAGGTTGATGTAAAAAG+AGG | + | chr3.3:84181168-84181187 | MS.gene38716:CDS | 35.0% |
| !! | AAGGAAGCTGTTTCTAAGTT+TGG | + | chr3.3:84181225-84181244 | MS.gene38716:CDS | 35.0% |
| !! | ACATTTGCTCATTGATTCTC+TGG | - | chr3.3:84183750-84183769 | None:intergenic | 35.0% |
| !! | ACTTTTGAAGAGGATTCAGA+GGG | - | chr3.3:84180478-84180497 | None:intergenic | 35.0% |
| !! | ATTTTTGAAGGGGATTCAGA+TGG | - | chr3.3:84180616-84180635 | None:intergenic | 35.0% |
| !! | CTCTTCAGTAACTTTTGAAG+AGG | - | chr3.3:84180488-84180507 | None:intergenic | 35.0% |
| !! | TCTGCTTGTTTTCTGTATTC+TGG | - | chr3.3:84183199-84183218 | None:intergenic | 35.0% |
| !!! | TCTTCTTTTCTGGTTCTTCT+TGG | - | chr3.3:84183903-84183922 | None:intergenic | 35.0% |
| AAATCATAGTCCAACTTCCC+AGG | - | chr3.3:84182593-84182612 | None:intergenic | 40.0% | |
| AACAAGCGACCAGCTAAATT+TGG | + | chr3.3:84180957-84180976 | MS.gene38716:CDS | 40.0% | |
| AACCACTCTGTTGTTAAACC+GGG | + | chr3.3:84182050-84182069 | MS.gene38716:intron | 40.0% | |
| AACTGGAAGTTGCTAAAGCT+AGG | + | chr3.3:84183416-84183435 | MS.gene38716:CDS | 40.0% | |
| AAGTGGAATTGGAAGTTCTG+AGG | - | chr3.3:84180776-84180795 | None:intergenic | 40.0% | |
| AATCATCTCTTGCCTCGATT+AGG | + | chr3.3:84184064-84184083 | MS.gene38716:CDS | 40.0% | |
| AATTAGTCATGAGACCCTAG+TGG | + | chr3.3:84182447-84182466 | MS.gene38716:intron | 40.0% | |
| AATTTGAGTGGTCCAACCTA+TGG | - | chr3.3:84182120-84182139 | None:intergenic | 40.0% | |
| ACATATATACCTCCACAGTC+TGG | - | chr3.3:84181281-84181300 | None:intergenic | 40.0% | |
| ACTGAAATCCTTCGAGAAGT+TGG | + | chr3.3:84184590-84184609 | MS.gene38716:CDS | 40.0% | |
| AGAAGAAATCGTTGTTCCCA+CGG | + | chr3.3:84184952-84184971 | MS.gene38716:CDS | 40.0% | |
| AGATTCACTCAATTGGGAGA+AGG | + | chr3.3:84183699-84183718 | MS.gene38716:CDS | 40.0% | |
| AGTTACTGAGACACAACTGA+TGG | + | chr3.3:84180699-84180718 | MS.gene38716:CDS | 40.0% | |
| AGTTTGGAGGAATTGTCGAT+TGG | + | chr3.3:84181241-84181260 | MS.gene38716:CDS | 40.0% | |
| ATAGAGAGATAGCTGCTAGA+AGG | + | chr3.3:84184622-84184641 | MS.gene38716:CDS | 40.0% | |
| CAAAGAACATCATAACCCGT+GGG | - | chr3.3:84184971-84184990 | None:intergenic | 40.0% | |
| CAAGGTAATCAAAACTGGAC+CGG | - | chr3.3:84182810-84182829 | None:intergenic | 40.0% | |
| CAAGGTAATGAAAACCGGAT+CGG | + | chr3.3:84181979-84181998 | MS.gene38716:intron | 40.0% | |
| CATAGAGAAAGCAAATGCTG+AGG | + | chr3.3:84183987-84184006 | MS.gene38716:CDS | 40.0% | |
| CATGCAGAAAAAGATGAAGG+TGG | + | chr3.3:84184897-84184916 | MS.gene38716:CDS | 40.0% | |
| CTCCAACAGAAAATCAAGCA+AGG | - | chr3.3:84183080-84183099 | None:intergenic | 40.0% | |
| CTTTAACAAGAGAAAGAGCG+GGG | + | chr3.3:84182232-84182251 | MS.gene38716:intron | 40.0% | |
| GAAGAGGATTCAGAATCAGA+GGG | - | chr3.3:84180544-84180563 | None:intergenic | 40.0% | |
| GAAGCAGAGGAACAAAGAAT+AGG | + | chr3.3:84183655-84183674 | MS.gene38716:CDS | 40.0% | |
| GAGGAAGATTGATTATGTGG+TGG | - | chr3.3:84180757-84180776 | None:intergenic | 40.0% | |
| GCAAGAGGCAAATGTTGTTA+TGG | + | chr3.3:84181470-84181489 | MS.gene38716:intron | 40.0% | |
| GGACTTGACAAATATTGTGC+AGG | - | chr3.3:84184864-84184883 | None:intergenic | 40.0% | |
| GTCACATCCACTGTATCATT+TGG | - | chr3.3:84180934-84180953 | None:intergenic | 40.0% | |
| TAACCAGAATAAAAGCCCCA+GGG | + | chr3.3:84184779-84184798 | MS.gene38716:CDS | 40.0% | |
| TACATCAACCTGCTTGGTTT+GGG | - | chr3.3:84181163-84181182 | None:intergenic | 40.0% | |
| TACTACTAGTCGAACTTCCT+AGG | - | chr3.3:84182428-84182447 | None:intergenic | 40.0% | |
| TAGAAGGGAATCCTTGAAGA+TGG | + | chr3.3:84184638-84184657 | MS.gene38716:CDS | 40.0% | |
| TAGAGAGATAGCTGCTAGAA+GGG | + | chr3.3:84184623-84184642 | MS.gene38716:CDS | 40.0% | |
| TCATCACCGGAATCAAAACA+TGG | + | chr3.3:84184921-84184940 | MS.gene38716:CDS | 40.0% | |
| TCTCCGTTACTAAGTGGAAT+TGG | - | chr3.3:84180787-84180806 | None:intergenic | 40.0% | |
| TCTTCAACATGTTCTGCTAG+TGG | - | chr3.3:84180514-84180533 | None:intergenic | 40.0% | |
| TGAAAATGAGCAACGGAGAA+AGG | + | chr3.3:84184731-84184750 | MS.gene38716:CDS | 40.0% | |
| TGAAGAGGATTCAGAATCAG+AGG | - | chr3.3:84180545-84180564 | None:intergenic | 40.0% | |
| TGAAGCTATTAAGAAAGCCG+AGG | + | chr3.3:84183528-84183547 | MS.gene38716:CDS | 40.0% | |
| TGAGCAAATGTTGTCTGCAA+AGG | + | chr3.3:84183759-84183778 | MS.gene38716:CDS | 40.0% | |
| TTAACCAGAATAAAAGCCCC+AGG | + | chr3.3:84184778-84184797 | MS.gene38716:CDS | 40.0% | |
| TTACATCAACCTGCTTGGTT+TGG | - | chr3.3:84181164-84181183 | None:intergenic | 40.0% | |
| TTGGAGAATAAGATGTGCAC+AGG | + | chr3.3:84182328-84182347 | MS.gene38716:intron | 40.0% | |
| TTGGGAGAAGGAACTTAAAC+AGG | + | chr3.3:84183711-84183730 | MS.gene38716:CDS | 40.0% | |
| ! | CACTTCGGTATTTTCTTCAG+AGG | - | chr3.3:84180728-84180747 | None:intergenic | 40.0% |
| ! | CTCTGAAGAAAATACCGAAG+TGG | + | chr3.3:84180726-84180745 | MS.gene38716:CDS | 40.0% |
| ! | GGGAAGTTGGACTATGATTT+TGG | + | chr3.3:84182593-84182612 | MS.gene38716:intron | 40.0% |
| ! | GTGTTGCCAAATGTTTCTGA+TGG | + | chr3.3:84180856-84180875 | MS.gene38716:CDS | 40.0% |
| ! | TATTCTGGTTAACCACTCCT+TGG | - | chr3.3:84184770-84184789 | None:intergenic | 40.0% |
| ! | TCTGTGTGTGTCTTCTTTTC+TGG | - | chr3.3:84183913-84183932 | None:intergenic | 40.0% |
| ! | TGAAAGCATACACTGGAGAA+GGG | + | chr3.3:84182263-84182282 | MS.gene38716:intron | 40.0% |
| ! | TGCATCTCTAGAAGCTGAAT+TGG | + | chr3.3:84184116-84184135 | MS.gene38716:CDS | 40.0% |
| ! | TTCTAGAGATGCAACTGCAA+TGG | - | chr3.3:84184109-84184128 | None:intergenic | 40.0% |
| ! | TTGCAGCTTCTTTGGAAGTT+CGG | - | chr3.3:84184205-84184224 | None:intergenic | 40.0% |
| !! | AGCTGCTAATTCTGAAGTTG+AGG | + | chr3.3:84184551-84184570 | MS.gene38716:CDS | 40.0% |
| !! | GAAGCTGTTTCTAAGTTTGG+AGG | + | chr3.3:84181228-84181247 | MS.gene38716:CDS | 40.0% |
| !! | GCTATGATCCGTTTTAAGCA+AGG | + | chr3.3:84181961-84181980 | MS.gene38716:intron | 40.0% |
| !! | TGCAGGATTAGTTGCATACT+GGG | - | chr3.3:84184847-84184866 | None:intergenic | 40.0% |
| !! | TTCTGAAGTTGAGGTAGCTA+AGG | + | chr3.3:84184560-84184579 | MS.gene38716:CDS | 40.0% |
| AAAGCTCAGAGTGGAAGAGA+TGG | + | chr3.3:84183351-84183370 | MS.gene38716:CDS | 45.0% | |
| AAAGCTGAGAAGGCAAAGGA+AGG | + | chr3.3:84184669-84184688 | MS.gene38716:CDS | 45.0% | |
| AAAGGAGATAGAGGCTGCAA+AGG | + | chr3.3:84184359-84184378 | MS.gene38716:CDS | 45.0% | |
| AACAGCTGAAGAGGCTAATC+AGG | + | chr3.3:84184227-84184246 | MS.gene38716:CDS | 45.0% | |
| ACATTGAACCAGTGTAGGCA+CGG | - | chr3.3:84182787-84182806 | None:intergenic | 45.0% | |
| ACCTCCATTCGAATCTGTCA+AGG | + | chr3.3:84181206-84181225 | MS.gene38716:CDS | 45.0% | |
| AGATGAAGGTGGATCATCAC+CGG | + | chr3.3:84184908-84184927 | MS.gene38716:CDS | 45.0% | |
| AGCACAAACTGAAGAGCAAC+AGG | + | chr3.3:84183306-84183325 | MS.gene38716:CDS | 45.0% | |
| AGCAGCTGCAATCCTTGTAT+TGG | - | chr3.3:84184538-84184557 | None:intergenic | 45.0% | |
| AGCTATTAAGAAAGCCGAGG+AGG | + | chr3.3:84183531-84183550 | MS.gene38716:CDS | 45.0% | |
| ATCAGCCAGAAAGGAACTTG+AGG | + | chr3.3:84183951-84183970 | MS.gene38716:CDS | 45.0% | |
| CAAATCAAGCAGCAAACCAG+AGG | - | chr3.3:84183809-84183828 | None:intergenic | 45.0% | |
| CAAGGAAGTAGAGAAGTCAG+TGG | + | chr3.3:84183567-84183586 | MS.gene38716:CDS | 45.0% | |
| CAAGGTTCAAAGGTTGGACA+GGG | - | chr3.3:84182761-84182780 | None:intergenic | 45.0% | |
| CAATTGATCCTCAGTACAGC+AGG | - | chr3.3:84183045-84183064 | None:intergenic | 45.0% | |
| CACTTCATCCAACTTCTCGA+AGG | - | chr3.3:84184601-84184620 | None:intergenic | 45.0% | |
| CAGGTTACTTGCAGCTCAAA+AGG | + | chr3.3:84184341-84184360 | MS.gene38716:CDS | 45.0% | |
| CAGTGGGGTTACACTTTCTT+TGG | + | chr3.3:84184464-84184483 | MS.gene38716:CDS | 45.0% | |
| CATCAACCTGCAATTCATGC+TGG | - | chr3.3:84181023-84181042 | None:intergenic | 45.0% | |
| CTAAAACCGTGCAAAAGTGG+CGG | + | chr3.3:84182083-84182102 | MS.gene38716:intron | 45.0% | |
| CTTCAGTTTGTGCTCTCTCT+AGG | - | chr3.3:84183300-84183319 | None:intergenic | 45.0% | |
| GAAGAAATCGTTGTTCCCAC+GGG | + | chr3.3:84184953-84184972 | MS.gene38716:CDS | 45.0% | |
| GAGTAAGTACCTTGGAAAGC+AGG | + | chr3.3:84184322-84184341 | MS.gene38716:CDS | 45.0% | |
| GATTAGGCAAAGAGAGGGAA+TGG | + | chr3.3:84184080-84184099 | MS.gene38716:CDS | 45.0% | |
| GCAAAGAACATCATAACCCG+TGG | - | chr3.3:84184972-84184991 | None:intergenic | 45.0% | |
| GCTGTTAGTTGCAGCTTCTT+TGG | - | chr3.3:84184213-84184232 | None:intergenic | 45.0% | |
| GCTTCCTTGACAGATTCGAA+TGG | - | chr3.3:84181213-84181232 | None:intergenic | 45.0% | |
| GGAAAAAGCTGAGAAGGCAA+AGG | + | chr3.3:84184665-84184684 | MS.gene38716:CDS | 45.0% | |
| GGAATCCTTGAAGATGGCAA+TGG | + | chr3.3:84184644-84184663 | MS.gene38716:CDS | 45.0% | |
| GGAGAGCTGAAAATGAGCAA+CGG | + | chr3.3:84184724-84184743 | MS.gene38716:CDS | 45.0% | |
| GGCAATGGAAAAAGCTGAGA+AGG | + | chr3.3:84184659-84184678 | MS.gene38716:CDS | 45.0% | |
| GTACCAAACAGACCAGACAT+AGG | - | chr3.3:84182026-84182045 | None:intergenic | 45.0% | |
| TACCTCCTCAAGTTCCTTTC+TGG | - | chr3.3:84183959-84183978 | None:intergenic | 45.0% | |
| TAGAGATGCAACTGCAATGG+AGG | - | chr3.3:84184106-84184125 | None:intergenic | 45.0% | |
| TCAAGGTTCAAAGGTTGGAC+AGG | - | chr3.3:84182762-84182781 | None:intergenic | 45.0% | |
| TCCACTTCTCCGTTACTAAG+TGG | - | chr3.3:84180793-84180812 | None:intergenic | 45.0% | |
| TCCTTGACAGATTCGAATGG+AGG | - | chr3.3:84181210-84181229 | None:intergenic | 45.0% | |
| TCTTCAACATGTTCTGCCAG+TGG | - | chr3.3:84180652-84180671 | None:intergenic | 45.0% | |
| TGCAAGTAACCTGCTTTCCA+AGG | - | chr3.3:84184334-84184353 | None:intergenic | 45.0% | |
| TGCAGCTCAAAAGGAGATAG+AGG | + | chr3.3:84184350-84184369 | MS.gene38716:CDS | 45.0% | |
| TGCTGGTCAGAGATATCTTC+TGG | - | chr3.3:84181006-84181025 | None:intergenic | 45.0% | |
| ! | AATTTCTGAAGAGACGCCAC+TGG | + | chr3.3:84180633-84180652 | MS.gene38716:CDS | 45.0% |
| ! | CAAAGAAAGTGTAACCCCAC+TGG | - | chr3.3:84184466-84184485 | None:intergenic | 45.0% |
| ! | CTTCTAGGTTCTAGCCACTA+GGG | - | chr3.3:84182464-84182483 | None:intergenic | 45.0% |
| ! | GATTAGTTGCATACTGGGAC+CGG | - | chr3.3:84184842-84184861 | None:intergenic | 45.0% |
| ! | GGATGAGTGAAAGCATACAC+TGG | + | chr3.3:84182256-84182275 | MS.gene38716:intron | 45.0% |
| ! | GTGAAAGCATACACTGGAGA+AGG | + | chr3.3:84182262-84182281 | MS.gene38716:intron | 45.0% |
| ! | TCCACTTAGTAACGGAGAAG+TGG | + | chr3.3:84180789-84180808 | MS.gene38716:CDS | 45.0% |
| ! | TGGAGGAATTGTCGATTGGA+AGG | + | chr3.3:84181245-84181264 | MS.gene38716:CDS | 45.0% |
| ! | TTTTGCTTCCTGCTGTACTG+AGG | + | chr3.3:84183034-84183053 | MS.gene38716:intron | 45.0% |
| !! | ATGTGGTGGGTTTACCACTT+CGG | - | chr3.3:84180743-84180762 | None:intergenic | 45.0% |
| !! | CACTGACTTCTCTACTTCCT+TGG | - | chr3.3:84183569-84183588 | None:intergenic | 45.0% |
| !! | CCACTTTTGCACGGTTTTAG+CGG | - | chr3.3:84182083-84182102 | None:intergenic | 45.0% |
| !! | GTGCAGGATTAGTTGCATAC+TGG | - | chr3.3:84184848-84184867 | None:intergenic | 45.0% |
| !! | TTCCTTTCTGGCTGATTCCA+CGG | - | chr3.3:84183947-84183966 | None:intergenic | 45.0% |
| !!! | CGGTCCAGTTTTGATTACCT+TGG | + | chr3.3:84182808-84182827 | MS.gene38716:intron | 45.0% |
| AAAGTGTAACCCCACTGGAC+GGG | - | chr3.3:84184461-84184480 | None:intergenic | 50.0% | |
| AAGAAGAGGAGGGTAGACGT+GGG | + | chr3.3:84182288-84182307 | MS.gene38716:intron | 50.0% | |
| AATGAGCAACGGAGAAAGGC+TGG | + | chr3.3:84184735-84184754 | MS.gene38716:CDS | 50.0% | |
| ACCGGACATTGAACCAGTGT+AGG | - | chr3.3:84182792-84182811 | None:intergenic | 50.0% | |
| ACTGGAGAAGGGAGAAGAAG+AGG | + | chr3.3:84182274-84182293 | MS.gene38716:intron | 50.0% | |
| AGAGCTGGATGCATTGCGTA+AGG | + | chr3.3:84183477-84183496 | MS.gene38716:CDS | 50.0% | |
| AGAGTGGAAGAGATGGAGCA+AGG | + | chr3.3:84183358-84183377 | MS.gene38716:CDS | 50.0% | |
| AGCAACTTCCAGTTGTGCCT+TGG | - | chr3.3:84183410-84183429 | None:intergenic | 50.0% | |
| AGCAGCTGTGAAAGAAGAGC+TGG | + | chr3.3:84183462-84183481 | MS.gene38716:CDS | 50.0% | |
| AGCCAGAAAGGAACTTGAGG+AGG | + | chr3.3:84183954-84183973 | MS.gene38716:CDS | 50.0% | |
| AGCTGCTTGAGCAAGCAAGT+TGG | - | chr3.3:84184253-84184272 | None:intergenic | 50.0% | |
| AGTGGTCCAACCTATGGATC+CGG | - | chr3.3:84182114-84182133 | None:intergenic | 50.0% | |
| CAAGGCTGGAGTAAGTACCT+TGG | + | chr3.3:84184314-84184333 | MS.gene38716:CDS | 50.0% | |
| CACAGATATACAAGCAGCCG+TGG | + | chr3.3:84183927-84183946 | MS.gene38716:CDS | 50.0% | |
| CAGAAGAGCGAGCCAATACA+AGG | + | chr3.3:84184523-84184542 | MS.gene38716:CDS | 50.0% | |
| CATTGAACCAGTGTAGGCAC+GGG | - | chr3.3:84182786-84182805 | None:intergenic | 50.0% | |
| CCGCTAAAACCGTGCAAAAG+TGG | + | chr3.3:84182080-84182099 | MS.gene38716:intron | 50.0% | |
| CCTAGTGGCTAGAACCTAGA+AGG | + | chr3.3:84182462-84182481 | MS.gene38716:intron | 50.0% | |
| CGGGTTCAAGGTTCAAAGGT+TGG | - | chr3.3:84182767-84182786 | None:intergenic | 50.0% | |
| CTCTGACCAGCATGAATTGC+AGG | + | chr3.3:84181014-84181033 | MS.gene38716:CDS | 50.0% | |
| GAAAACGCAGAACAAGCTGC+CGG | - | chr3.3:84182186-84182205 | None:intergenic | 50.0% | |
| GACAGATTCGAATGGAGGTG+TGG | - | chr3.3:84181205-84181224 | None:intergenic | 50.0% | |
| GAGAAGGGAGAAGAAGAGGA+GGG | + | chr3.3:84182278-84182297 | MS.gene38716:intron | 50.0% | |
| GAGGCGCAATCTAGTAGAAC+AGG | + | chr3.3:84183147-84183166 | MS.gene38716:intron | 50.0% | |
| GATGATGAACTCTCGCAAGG+AGG | + | chr3.3:84183877-84183896 | MS.gene38716:CDS | 50.0% | |
| GCCTCGATTAGGCAAAGAGA+GGG | + | chr3.3:84184075-84184094 | MS.gene38716:CDS | 50.0% | |
| GCTGCAACTAACAGCTGAAG+AGG | + | chr3.3:84184218-84184237 | MS.gene38716:CDS | 50.0% | |
| GGAACTTGCAAAGCTCAGAG+TGG | + | chr3.3:84183342-84183361 | MS.gene38716:CDS | 50.0% | |
| GGACCTATGTCTGGTCTGTT+TGG | + | chr3.3:84182020-84182039 | MS.gene38716:intron | 50.0% | |
| GTAATGAAAACCGGATCGGC+CGG | + | chr3.3:84181983-84182002 | MS.gene38716:intron | 50.0% | |
| TAACAAGAGAAAGAGCGGGG+AGG | + | chr3.3:84182235-84182254 | MS.gene38716:intron | 50.0% | |
| TCATCGAATCCAGACTGTGG+AGG | + | chr3.3:84181269-84181288 | MS.gene38716:CDS | 50.0% | |
| TCCCTCTCTTTGCCTAATCG+AGG | - | chr3.3:84184079-84184098 | None:intergenic | 50.0% | |
| TCTAAACTGGAAGCAGCCTC+TGG | + | chr3.3:84183790-84183809 | MS.gene38716:CDS | 50.0% | |
| TGAAGAGCAACAGGCAAGAC+AGG | + | chr3.3:84183315-84183334 | MS.gene38716:CDS | 50.0% | |
| TGCCCGGTTTAACAACAGAG+TGG | - | chr3.3:84182055-84182074 | None:intergenic | 50.0% | |
| TGCCTCGATTAGGCAAAGAG+AGG | + | chr3.3:84184074-84184093 | MS.gene38716:CDS | 50.0% | |
| ! | AGTAACGGAGAAGTGGAGTC+TGG | + | chr3.3:84180796-84180815 | MS.gene38716:CDS | 50.0% |
| ! | CAAGGTACTTACTCCAGCCT+TGG | - | chr3.3:84184316-84184335 | None:intergenic | 50.0% |
| ! | CCTTCTAGGTTCTAGCCACT+AGG | - | chr3.3:84182465-84182484 | None:intergenic | 50.0% |
| ! | GAAAGTGTAACCCCACTGGA+CGG | - | chr3.3:84184462-84184481 | None:intergenic | 50.0% |
| ! | GGTGATGATGAACTCTCGCA+AGG | + | chr3.3:84183874-84183893 | MS.gene38716:CDS | 50.0% |
| ! | TAGCCCTGGGGCTTTTATTC+TGG | - | chr3.3:84184785-84184804 | None:intergenic | 50.0% |
| !! | ATCAACCTGCTTGGTTTGGG+CGG | - | chr3.3:84181160-84181179 | None:intergenic | 50.0% |
| !! | GAGATATCTTCTGGAGCACC+TGG | - | chr3.3:84180997-84181016 | None:intergenic | 50.0% |
| !! | GCCTACACTGGTTCAATGTC+CGG | + | chr3.3:84182788-84182807 | MS.gene38716:intron | 50.0% |
| !! | GGTTTTAGCGGTTTACTGCC+CGG | - | chr3.3:84182071-84182090 | None:intergenic | 50.0% |
| !!! | AACGGGGCTTTTGAAGCTTC+CGG | + | chr3.3:84182164-84182183 | MS.gene38716:intron | 50.0% |
| AACCGTGCAAAAGTGGCGGT+TGG | + | chr3.3:84182087-84182106 | MS.gene38716:intron | 55.0% | |
| AATGAAGTGGACCCGTCCAG+TGG | + | chr3.3:84184447-84184466 | MS.gene38716:CDS | 55.0% | |
| ACCGTGCAAAAGTGGCGGTT+GGG | + | chr3.3:84182088-84182107 | MS.gene38716:intron | 55.0% | |
| AGCCGTGGAATCAGCCAGAA+AGG | + | chr3.3:84183942-84183961 | MS.gene38716:CDS | 55.0% | |
| ATGAAGTGGACCCGTCCAGT+GGG | + | chr3.3:84184448-84184467 | MS.gene38716:CDS | 55.0% | |
| CAGTTGCAGTCGTGCTTTGG+TGG | + | chr3.3:84181544-84181563 | MS.gene38716:intron | 55.0% | |
| CCAGACATAGGTCCAGTTCC+CGG | - | chr3.3:84182014-84182033 | None:intergenic | 55.0% | |
| CGAATCTAGCGTTGCAGCCA+AGG | + | chr3.3:84183390-84183409 | MS.gene38716:CDS | 55.0% | |
| GAAGAAGAGGAGGGTAGACG+TGG | + | chr3.3:84182287-84182306 | MS.gene38716:intron | 55.0% | |
| GAAGCAGAACAAGCCAAGGC+TGG | + | chr3.3:84184300-84184319 | MS.gene38716:CDS | 55.0% | |
| GACTGCTCATGCTGCACACT+TGG | + | chr3.3:84183633-84183652 | MS.gene38716:CDS | 55.0% | |
| GCAACAGGCAAGACAGGACT+CGG | + | chr3.3:84183321-84183340 | MS.gene38716:CDS | 55.0% | |
| GCTTAGCAAACGAGCTCACG+AGG | + | chr3.3:84184500-84184519 | MS.gene38716:CDS | 55.0% | |
| GGAGAAGGGAGAAGAAGAGG+AGG | + | chr3.3:84182277-84182296 | MS.gene38716:intron | 55.0% | |
| GGAGGCAGTTACAGCATCCA+AGG | + | chr3.3:84183549-84183568 | MS.gene38716:CDS | 55.0% | |
| GGATGCTGTAACTGCCTCCT+CGG | - | chr3.3:84183548-84183567 | None:intergenic | 55.0% | |
| GGCACGGGTTCAAGGTTCAA+AGG | - | chr3.3:84182771-84182790 | None:intergenic | 55.0% | |
| GGCAGAAGCAGAACAAGCCA+AGG | + | chr3.3:84184296-84184315 | MS.gene38716:CDS | 55.0% | |
| GGCTCATCGAATCCAGACTG+TGG | + | chr3.3:84181266-84181285 | MS.gene38716:CDS | 55.0% | |
| GTGAGAAAACGGTCTGACCC+TGG | + | chr3.3:84182730-84182749 | MS.gene38716:intron | 55.0% | |
| TGCTGCACACTTGGAAGCAG+AGG | + | chr3.3:84183642-84183661 | MS.gene38716:CDS | 55.0% | |
| TGGCAGTTGCAGTCGTGCTT+TGG | + | chr3.3:84181541-84181560 | MS.gene38716:intron | 55.0% | |
| !! | TCAACCTGCTTGGTTTGGGC+GGG | - | chr3.3:84181159-84181178 | None:intergenic | 55.0% |
| !!! | AAGCCCCAGGGCTAGTTTTG+AGG | + | chr3.3:84184791-84184810 | MS.gene38716:CDS | 55.0% |
| !!! | AGCCCCAGGGCTAGTTTTGA+GGG | + | chr3.3:84184792-84184811 | MS.gene38716:CDS | 55.0% |
| !!! | GGCTAGTTTTGAGGGGGGTA+AGG | + | chr3.3:84184800-84184819 | MS.gene38716:CDS | 55.0% |
| AAGGCTGGTGAGTCTGGCCA+AGG | + | chr3.3:84184750-84184769 | MS.gene38716:CDS | 60.0% | |
| ACCCCCCTCAAAACTAGCCC+TGG | - | chr3.3:84184799-84184818 | None:intergenic | 60.0% | |
| AGGTTGGACAGGGTTCGACC+AGG | - | chr3.3:84182751-84182770 | None:intergenic | 60.0% | |
| CCAGTGTAGGCACGGGTTCA+AGG | - | chr3.3:84182779-84182798 | None:intergenic | 60.0% | |
| CCCCCCTCAAAACTAGCCCT+GGG | - | chr3.3:84184798-84184817 | None:intergenic | 60.0% | |
| CCCCCTCAAAACTAGCCCTG+GGG | - | chr3.3:84184797-84184816 | None:intergenic | 60.0% | |
| CCGGGAACTGGACCTATGTC+TGG | + | chr3.3:84182011-84182030 | MS.gene38716:intron | 60.0% | |
| CCTTGAACCCGTGCCTACAC+TGG | + | chr3.3:84182776-84182795 | MS.gene38716:intron | 60.0% | |
| CGGAGAAAGGCTGGTGAGTC+TGG | + | chr3.3:84184744-84184763 | MS.gene38716:CDS | 60.0% | |
| CGTTGCAGCCAAGGCACAAC+TGG | + | chr3.3:84183399-84183418 | MS.gene38716:CDS | 60.0% | |
| GGTCCAGTTCCCGGTTCAAC+CGG | - | chr3.3:84182005-84182024 | None:intergenic | 60.0% | |
| GGTTGGACAGGGTTCGACCA+GGG | - | chr3.3:84182750-84182769 | None:intergenic | 60.0% | |
| GTTGGGCCGGATCCATAGGT+TGG | + | chr3.3:84182105-84182124 | MS.gene38716:intron | 60.0% | |
| TGAAGTGGACCCGTCCAGTG+GGG | + | chr3.3:84184449-84184468 | MS.gene38716:CDS | 60.0% | |
| TGCAAAAGTGGCGGTTGGGC+CGG | + | chr3.3:84182092-84182111 | MS.gene38716:intron | 60.0% | |
| TGGTGAGTCTGGCCAAGGAG+TGG | + | chr3.3:84184755-84184774 | MS.gene38716:CDS | 60.0% | |
| !!! | CCCAGGGCTAGTTTTGAGGG+GGG | + | chr3.3:84184795-84184814 | MS.gene38716:CDS | 60.0% |
| !!! | CCCCAGGGCTAGTTTTGAGG+GGG | + | chr3.3:84184794-84184813 | MS.gene38716:CDS | 60.0% |
| !!! | GCCCAACCGCCACTTTTGCA+CGG | - | chr3.3:84182092-84182111 | None:intergenic | 60.0% |
| !!! | GCCCCAGGGCTAGTTTTGAG+GGG | + | chr3.3:84184793-84184812 | MS.gene38716:CDS | 60.0% |
| ACCGGATCGGCCGGTTGAAC+CGG | + | chr3.3:84181992-84182011 | MS.gene38716:intron | 65.0% | |
| CTCACCCGCCCAAACCAAGC+AGG | + | chr3.3:84181152-84181171 | MS.gene38716:CDS | 65.0% | |
| CCCGGTTCAACCGGCCGATC+CGG | - | chr3.3:84181996-84182015 | None:intergenic | 70.0% | |
| CCGGATCGGCCGGTTGAACC+GGG | + | chr3.3:84181993-84182012 | MS.gene38716:intron | 70.0% | |
| CGGCCGGTTGAACCGGGAAC+TGG | + | chr3.3:84181999-84182018 | MS.gene38716:intron | 70.0% | |
| GGCGGTTGGGCCGGATCCAT+AGG | + | chr3.3:84182101-84182120 | MS.gene38716:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 84180385 | 84185025 | 84180385 | ID=MS.gene38716 |
| chr3.3 | mRNA | 84180385 | 84185025 | 84180385 | ID=MS.gene38716.t1;Parent=MS.gene38716 |
| chr3.3 | exon | 84180385 | 84181290 | 84180385 | ID=MS.gene38716.t1.exon1;Parent=MS.gene38716.t1 |
| chr3.3 | CDS | 84180385 | 84181290 | 84180385 | ID=cds.MS.gene38716.t1;Parent=MS.gene38716.t1 |
| chr3.3 | exon | 84183148 | 84185025 | 84183148 | ID=MS.gene38716.t1.exon2;Parent=MS.gene38716.t1 |
| chr3.3 | CDS | 84183148 | 84185025 | 84183148 | ID=cds.MS.gene38716.t1;Parent=MS.gene38716.t1 |
| Gene Sequence |
| Protein sequence |
