Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene43727.t1 | XP_013454118.1 | 98.9 | 349 | 4 | 0 | 512 | 860 | 10 | 358 | 1.00E-190 | 677.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene43727.t1 | P46257 | 93.1 | 350 | 23 | 1 | 512 | 860 | 10 | 359 | 8.2e-181 | 635.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene43727.t1 | I3SU63 | 98.9 | 349 | 4 | 0 | 512 | 860 | 10 | 358 | 7.4e-191 | 677.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049298 | MS.gene43727 | 0.830772 | 2.43E-55 | -1.69E-46 |
MS.gene050710 | MS.gene43727 | 0.834919 | 2.27E-56 | -1.69E-46 |
MS.gene050868 | MS.gene43727 | -0.803715 | 3.05E-49 | -1.69E-46 |
MS.gene050871 | MS.gene43727 | -0.80567 | 1.19E-49 | -1.69E-46 |
MS.gene051838 | MS.gene43727 | -0.820295 | 7.40E-53 | -1.69E-46 |
MS.gene052209 | MS.gene43727 | 0.819206 | 1.31E-52 | -1.69E-46 |
MS.gene052503 | MS.gene43727 | -0.804318 | 2.29E-49 | -1.69E-46 |
MS.gene052823 | MS.gene43727 | -0.816153 | 6.40E-52 | -1.69E-46 |
MS.gene052825 | MS.gene43727 | -0.823632 | 1.25E-53 | -1.69E-46 |
MS.gene053108 | MS.gene43727 | 0.859578 | 3.75E-63 | -1.69E-46 |
MS.gene053421 | MS.gene43727 | 0.853999 | 1.65E-61 | -1.69E-46 |
MS.gene054662 | MS.gene43727 | 0.818696 | 1.71E-52 | -1.69E-46 |
MS.gene054706 | MS.gene43727 | 0.838421 | 2.90E-57 | -1.69E-46 |
MS.gene05470 | MS.gene43727 | -0.80012 | 1.67E-48 | -1.69E-46 |
MS.gene054941 | MS.gene43727 | 0.829138 | 6.09E-55 | -1.69E-46 |
MS.gene055158 | MS.gene43727 | 0.803265 | 3.79E-49 | -1.69E-46 |
MS.gene05589 | MS.gene43727 | -0.805343 | 1.40E-49 | -1.69E-46 |
MS.gene056387 | MS.gene43727 | -0.864827 | 9.19E-65 | -1.69E-46 |
MS.gene05652 | MS.gene43727 | 0.815866 | 7.42E-52 | -1.69E-46 |
MS.gene056618 | MS.gene43727 | 0.824464 | 7.96E-54 | -1.69E-46 |
MS.gene057081 | MS.gene43727 | 0.848372 | 6.39E-60 | -1.69E-46 |
MS.gene057356 | MS.gene43727 | 0.812315 | 4.51E-51 | -1.69E-46 |
MS.gene057367 | MS.gene43727 | 0.803377 | 3.59E-49 | -1.69E-46 |
MS.gene057658 | MS.gene43727 | -0.8005 | 1.40E-48 | -1.69E-46 |
MS.gene057669 | MS.gene43727 | 0.845594 | 3.68E-59 | -1.69E-46 |
MS.gene057717 | MS.gene43727 | 0.802976 | 4.34E-49 | -1.69E-46 |
MS.gene058157 | MS.gene43727 | -0.841504 | 4.57E-58 | -1.69E-46 |
MS.gene058418 | MS.gene43727 | 0.824621 | 7.31E-54 | -1.69E-46 |
MS.gene05926 | MS.gene43727 | 0.829356 | 5.39E-55 | -1.69E-46 |
MS.gene05960 | MS.gene43727 | 0.838999 | 2.06E-57 | -1.69E-46 |
MS.gene059667 | MS.gene43727 | -0.80465 | 1.95E-49 | -1.69E-46 |
MS.gene06000 | MS.gene43727 | -0.80112 | 1.05E-48 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene43727.t1 | MTR_5g069055 | 98.854 | 349 | 4 | 0 | 512 | 860 | 10 | 358 | 0.0 | 704 |
MS.gene43727.t1 | MTR_5g069050 | 93.410 | 349 | 8 | 1 | 512 | 860 | 51 | 384 | 0.0 | 654 |
MS.gene43727.t1 | MTR_1g061050 | 87.966 | 349 | 42 | 0 | 512 | 860 | 10 | 358 | 0.0 | 629 |
MS.gene43727.t1 | MTR_5g096670 | 77.904 | 353 | 77 | 1 | 508 | 860 | 6 | 357 | 0.0 | 552 |
MS.gene43727.t1 | MTR_4g057670 | 56.215 | 354 | 150 | 4 | 508 | 860 | 51 | 400 | 6.99e-126 | 384 |
MS.gene43727.t1 | MTR_4g071860 | 56.215 | 354 | 150 | 4 | 508 | 860 | 51 | 400 | 8.47e-126 | 384 |
MS.gene43727.t1 | MTR_1g109200 | 53.782 | 357 | 160 | 4 | 505 | 860 | 39 | 391 | 2.74e-123 | 377 |
MS.gene43727.t1 | MTR_4g071880 | 50.980 | 357 | 152 | 6 | 508 | 860 | 49 | 386 | 1.57e-105 | 331 |
MS.gene43727.t1 | MTR_7g103920 | 67.708 | 96 | 6 | 1 | 614 | 709 | 11 | 81 | 5.61e-34 | 125 |
MS.gene43727.t1 | MTR_8g098345 | 37.762 | 143 | 80 | 3 | 2 | 141 | 137 | 273 | 1.99e-13 | 74.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene43727.t1 | AT3G52930 | 88.825 | 349 | 39 | 0 | 512 | 860 | 10 | 358 | 0.0 | 640 |
MS.gene43727.t1 | AT2G36460 | 87.393 | 349 | 44 | 0 | 512 | 860 | 10 | 358 | 0.0 | 627 |
MS.gene43727.t1 | AT5G03690 | 86.571 | 350 | 46 | 1 | 512 | 860 | 10 | 359 | 0.0 | 603 |
MS.gene43727.t1 | AT5G03690 | 86.533 | 349 | 46 | 1 | 513 | 860 | 45 | 393 | 0.0 | 600 |
MS.gene43727.t1 | AT4G26530 | 76.204 | 353 | 84 | 0 | 508 | 860 | 6 | 358 | 0.0 | 551 |
MS.gene43727.t1 | AT4G26530 | 76.204 | 353 | 84 | 0 | 508 | 860 | 6 | 358 | 0.0 | 551 |
MS.gene43727.t1 | AT4G26530 | 76.204 | 353 | 84 | 0 | 508 | 860 | 6 | 358 | 0.0 | 551 |
MS.gene43727.t1 | AT4G26520 | 71.060 | 349 | 101 | 0 | 512 | 860 | 7 | 355 | 1.71e-171 | 500 |
MS.gene43727.t1 | AT4G26520 | 71.060 | 349 | 101 | 0 | 512 | 860 | 7 | 355 | 1.71e-171 | 500 |
MS.gene43727.t1 | AT4G26520 | 71.060 | 349 | 101 | 0 | 512 | 860 | 10 | 358 | 2.31e-171 | 500 |
MS.gene43727.t1 | AT4G26520 | 71.182 | 347 | 100 | 0 | 512 | 858 | 10 | 356 | 9.43e-170 | 496 |
MS.gene43727.t1 | AT2G36460 | 87.266 | 267 | 34 | 0 | 594 | 860 | 1 | 267 | 9.93e-167 | 484 |
MS.gene43727.t1 | AT2G36460 | 87.266 | 267 | 34 | 0 | 594 | 860 | 1 | 267 | 9.93e-167 | 484 |
MS.gene43727.t1 | AT5G03690 | 86.142 | 267 | 36 | 1 | 595 | 860 | 1 | 267 | 1.34e-154 | 453 |
MS.gene43727.t1 | AT5G03690 | 86.142 | 267 | 36 | 1 | 595 | 860 | 1 | 267 | 1.34e-154 | 453 |
MS.gene43727.t1 | AT2G21330 | 56.857 | 350 | 146 | 4 | 512 | 860 | 54 | 399 | 5.25e-126 | 385 |
MS.gene43727.t1 | AT4G38970 | 56.571 | 350 | 147 | 4 | 512 | 860 | 53 | 398 | 8.13e-126 | 384 |
MS.gene43727.t1 | AT2G01140 | 55.085 | 354 | 154 | 4 | 508 | 860 | 42 | 391 | 1.25e-123 | 378 |
MS.gene43727.t1 | AT2G21330 | 54.857 | 350 | 143 | 5 | 512 | 860 | 54 | 389 | 2.11e-117 | 362 |
MS.gene43727.t1 | AT4G38970 | 56.031 | 257 | 111 | 2 | 512 | 767 | 53 | 308 | 5.14e-89 | 287 |
MS.gene43727.t1 | AT2G21330 | 55.686 | 255 | 111 | 2 | 512 | 765 | 54 | 307 | 1.97e-88 | 283 |
Find 224 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCTTCTGCATTGGAATTTAA+TGG | 0.154655 | 5.1:-53655101 | MS.gene43727:CDS |
GCATTGGAATTTAATGGTTT+TGG | 0.181892 | 5.1:-53655095 | MS.gene43727:CDS |
CACAAGCATCAAAGATTTAA+TGG | 0.187810 | 5.1:-53654373 | MS.gene43727:CDS |
ATGTGGTGATATGGCAATTT+TGG | 0.189525 | 5.1:-53654916 | MS.gene43727:CDS |
CAAAAGTAGAGTGGCTAATT+TGG | 0.204253 | 5.1:+53653726 | None:intergenic |
TGGACCCTTTCCTTCTCTTT+TGG | 0.209134 | 5.1:-53648106 | MS.gene43727:CDS |
GTAATAATCTTTGTCTTAAC+TGG | 0.246158 | 5.1:+53654435 | None:intergenic |
TAGTGGTTCGTCAAAATTTC+CGG | 0.251335 | 5.1:+53655187 | None:intergenic |
CAAATTAGCCACTCTACTTT+TGG | 0.257165 | 5.1:-53653725 | MS.gene43727:CDS |
CTTACCCTTGACTTGGTTGA+TGG | 0.263243 | 5.1:+53648135 | None:intergenic |
GTTATGGAACACAATCAAAA+AGG | 0.273275 | 5.1:-53655280 | MS.gene43727:CDS |
CTCCAGCTCAATAAAATTCT+TGG | 0.284353 | 5.1:+53653765 | None:intergenic |
CATTTCGAGTGTAGTGGTTT+TGG | 0.285269 | 5.1:-53653824 | MS.gene43727:CDS |
GGCGACTCTTGGAACTTATA+AGG | 0.306060 | 5.1:-53647981 | MS.gene43727:CDS |
AAATCCTTGTTGAACAGTTA+TGG | 0.317791 | 5.1:-53655296 | MS.gene43727:CDS |
ACAACTTTGTCCGGTGGTTT+CGG | 0.329233 | 5.1:+53654690 | None:intergenic |
TCTACGTGACAACTGCAATA+TGG | 0.333401 | 5.1:+53654552 | None:intergenic |
AACAAAGCTGGTGTGCTTCC+TGG | 0.336917 | 5.1:-53648694 | MS.gene43727:CDS |
CTCCATATTGGTTCTATGTA+TGG | 0.337466 | 5.1:-53653906 | MS.gene43727:CDS |
CAGGTGCACGTTTCGCTAAA+TGG | 0.343443 | 5.1:-53648567 | MS.gene43727:CDS |
CAAAATTTCCGGCGAATTCT+CGG | 0.344124 | 5.1:+53655198 | None:intergenic |
TTTATAGTTACCTTGACTTT+TGG | 0.352271 | 5.1:-53653966 | MS.gene43727:CDS |
ATGGTGTGGATTAGTGGATA+TGG | 0.355002 | 5.1:-53653887 | MS.gene43727:CDS |
CACCATACATAGAACCAATA+TGG | 0.358172 | 5.1:+53653904 | None:intergenic |
GAGTGCTCAGATGGCTCATT+GGG | 0.370466 | 5.1:+53648523 | None:intergenic |
CAGGTGACATGCGGTGGTTT+AGG | 0.376015 | 5.1:+53654741 | None:intergenic |
ATCATGATGATGAGGATAAA+TGG | 0.379659 | 5.1:-53654075 | MS.gene43727:CDS |
CCACATGAAAACAATTTATC+AGG | 0.379738 | 5.1:+53654933 | None:intergenic |
ACCACCACTCAGGGTCTTGA+TGG | 0.384125 | 5.1:-53648622 | MS.gene43727:CDS |
TAGACGCTTTCCAATTGTTC+CGG | 0.385779 | 5.1:+53649457 | None:intergenic |
ACCTTTGGTGCATCAGATCC+AGG | 0.397934 | 5.1:+53648283 | None:intergenic |
GTATCCTTGTACAGGGCATC+CGG | 0.398780 | 5.1:-53653680 | MS.gene43727:CDS |
ATCTGAATTTCCTTCTGCAT+TGG | 0.401304 | 5.1:-53655111 | MS.gene43727:CDS |
GCTTCAAGAGAGTGCCTTCA+AGG | 0.401651 | 5.1:+53648320 | None:intergenic |
GATGAGTCAACCGGAACAAT+TGG | 0.403195 | 5.1:-53649467 | MS.gene43727:CDS |
ATGCTTGTGCAAATCAGTTT+AGG | 0.404227 | 5.1:+53654387 | None:intergenic |
GGTGGTTTCTCCATCAGTTC+CGG | 0.405974 | 5.1:+53648639 | None:intergenic |
CTGCAATATGGCGGTTTAGC+TGG | 0.407037 | 5.1:+53654564 | None:intergenic |
GAGCCTGAGATCCTTGTTGA+TGG | 0.408703 | 5.1:-53648427 | MS.gene43727:CDS |
TTTATCCTCATCATCATGAT+TGG | 0.409966 | 5.1:+53654078 | None:intergenic |
ATTGTGGAAGTATGATCATT+TGG | 0.410218 | 5.1:+53654490 | None:intergenic |
TGGTGGCAGCATAAACTTCC+AGG | 0.415072 | 5.1:+53653992 | None:intergenic |
CTAGAAAACACTGTCGTTGA+TGG | 0.416018 | 5.1:-53655167 | MS.gene43727:CDS |
ACAACCTCGGGTGCAACCTT+TGG | 0.418995 | 5.1:+53648268 | None:intergenic |
GGTGTCCTTCAGTACCTTAG+TGG | 0.421088 | 5.1:-53649365 | MS.gene43727:CDS |
AGCAGCAAGAATACCCTTGC+CGG | 0.424830 | 5.1:+53649490 | None:intergenic |
AAGGGTACCGTTGAGCTTGC+CGG | 0.426023 | 5.1:-53648658 | MS.gene43727:CDS |
GCTAATTCTGAGGCGACTCT+TGG | 0.431168 | 5.1:-53647992 | MS.gene43727:CDS |
GATCCAGGGGTAACCATGTT+AGG | 0.432972 | 5.1:+53648298 | None:intergenic |
CTGCAGCGGTGCTTTGGTAG+AGG | 0.433294 | 5.1:+53649321 | None:intergenic |
ATGCATTAGTGTTAAGCAAC+TGG | 0.435203 | 5.1:-53653800 | MS.gene43727:CDS |
GACCACCATGTCCTCCTTGA+AGG | 0.437194 | 5.1:-53648334 | MS.gene43727:CDS |
CGTGACCTTCGAACCACCTT+GGG | 0.438784 | 5.1:+53655244 | None:intergenic |
AGTACCCTCAAGGCATGGTC+TGG | 0.442363 | 5.1:-53648067 | MS.gene43727:CDS |
GGAGCAATTATATATATTCC+TGG | 0.442656 | 5.1:-53654010 | MS.gene43727:CDS |
TAGTGGAGTCATCCTCTTTG+AGG | 0.444154 | 5.1:-53649348 | MS.gene43727:CDS |
GCGACTCTTGGAACTTATAA+GGG | 0.449304 | 5.1:-53647980 | MS.gene43727:CDS |
AGGTCACGGATGTGCAGAAA+AGG | 0.449986 | 5.1:-53655229 | MS.gene43727:CDS |
AGCATCAAAGATTTAATGGC+AGG | 0.453800 | 5.1:-53654369 | MS.gene43727:CDS |
AGGATCTCAGGCTCAACAAT+TGG | 0.457558 | 5.1:+53648436 | None:intergenic |
ATGGCTTCTTACCCTTGACT+TGG | 0.461709 | 5.1:+53648128 | None:intergenic |
TTGTCCGGTGGTTTCGGCTG+TGG | 0.462685 | 5.1:+53654696 | None:intergenic |
AAGTACCTGCAGCGGTGCTT+TGG | 0.463580 | 5.1:+53649315 | None:intergenic |
GGACACCAGGGGCGGTGAAA+AGG | 0.463623 | 5.1:+53649381 | None:intergenic |
CGAAGGGTCATCATGAGTAT+AGG | 0.465091 | 5.1:+53654591 | None:intergenic |
AGAGTGCTCAGATGGCTCAT+TGG | 0.465315 | 5.1:+53648522 | None:intergenic |
CCATGAGAATGCCTATGGTT+TGG | 0.465357 | 5.1:-53648497 | MS.gene43727:CDS |
CTCAAGAAGCTTTGTTGACA+AGG | 0.466664 | 5.1:-53648021 | MS.gene43727:CDS |
ATAAGCTAATTTCATGACAT+TGG | 0.466938 | 5.1:+53654467 | None:intergenic |
TGGCGTGCAGTGCTTAAAAT+CGG | 0.467744 | 5.1:-53648547 | MS.gene43727:CDS |
CTATGTATGGTGTGGATTAG+TGG | 0.468647 | 5.1:-53653893 | MS.gene43727:CDS |
GCGGTTTAGCTGGTGGTCGA+AGG | 0.468822 | 5.1:+53654574 | None:intergenic |
TTGGCATATGACAGCATATC+GGG | 0.470641 | 5.1:+53648474 | None:intergenic |
GAGGACATGGTGGTCATTCA+AGG | 0.470656 | 5.1:+53648342 | None:intergenic |
TAGTATCACACAATTGTCTT+CGG | 0.470817 | 5.1:-53654781 | MS.gene43727:CDS |
CTCTACCAAAGCACCGCTGC+AGG | 0.473908 | 5.1:-53649320 | MS.gene43727:intron |
CTTGGCATATGACAGCATAT+CGG | 0.474293 | 5.1:+53648473 | None:intergenic |
TCCGGTGGTTTCGGCTGTGG+TGG | 0.479716 | 5.1:+53654699 | None:intergenic |
CCAGACAAGAAAACAACAGC+TGG | 0.481066 | 5.1:+53648196 | None:intergenic |
GTGGAGACAACAACTTTGTC+CGG | 0.481750 | 5.1:+53654681 | None:intergenic |
CTTGCCGGGTGTGCCGATGT+AGG | 0.484543 | 5.1:+53649505 | None:intergenic |
GTGTGCTCAGCAACAACCTC+GGG | 0.487306 | 5.1:+53648256 | None:intergenic |
AGAATCATGTTGAATTCTTG+TGG | 0.490207 | 5.1:+53654968 | None:intergenic |
GGTGGTTTCGGCTGTGGTGG+AGG | 0.490650 | 5.1:+53654702 | None:intergenic |
AGCTTTGTTGACAAGGGCTA+AGG | 0.490730 | 5.1:-53648014 | MS.gene43727:CDS |
TAGGCAGTTGTTCAACAAGC+TGG | 0.492068 | 5.1:+53654406 | None:intergenic |
GTTGATGTCTTGAACAAAGC+TGG | 0.494911 | 5.1:-53648706 | MS.gene43727:CDS |
TGCAGCGGTGCTTTGGTAGA+GGG | 0.495649 | 5.1:+53649322 | None:intergenic |
TTGGTACAAGTCCATTCTCT+TGG | 0.496399 | 5.1:+53648455 | None:intergenic |
CCGTGACCTTCGAACCACCT+TGG | 0.498523 | 5.1:+53655243 | None:intergenic |
CAATTCTCAATACTTGTACA+TGG | 0.502698 | 5.1:-53653702 | MS.gene43727:CDS |
AGCTGGGACTGCAGCAGGTA+CGG | 0.503571 | 5.1:+53648213 | None:intergenic |
GCTGCCTACATCGGCACACC+CGG | 0.503985 | 5.1:-53649509 | MS.gene43727:CDS |
CTTGCTGCTGATGAGTCAAC+CGG | 0.504792 | 5.1:-53649476 | MS.gene43727:CDS |
TGTGCCGATGTAGGCAGCAT+TGG | 0.506890 | 5.1:+53649514 | None:intergenic |
TGTACATGGTATCCTTGTAC+AGG | 0.507333 | 5.1:-53653688 | MS.gene43727:CDS |
GTTGAGCTTGCCGGAACTGA+TGG | 0.507933 | 5.1:-53648649 | MS.gene43727:CDS |
GGTCCATCAACAAGGATCTC+AGG | 0.508887 | 5.1:+53648424 | None:intergenic |
GCTGTCATATGCCAAGAGAA+TGG | 0.511282 | 5.1:-53648466 | MS.gene43727:CDS |
CAATGTTAGTTGTACTCACA+TGG | 0.511945 | 5.1:-53654832 | MS.gene43727:CDS |
TGGTGTGCTTCCTGGTATCA+AGG | 0.513204 | 5.1:-53648686 | MS.gene43727:CDS |
GGGCGGTGAAAAGGAGTTCA+CGG | 0.513566 | 5.1:+53649390 | None:intergenic |
CCCTTGTCAACCTTGATACC+AGG | 0.513576 | 5.1:+53648676 | None:intergenic |
TTAGGATTGTCATAGACTGT+TGG | 0.515515 | 5.1:+53654156 | None:intergenic |
TATTTGACAAAATGTGTGTA+TGG | 0.516272 | 5.1:-53654867 | MS.gene43727:CDS |
AGATTTAATGGCAGGGAATG+TGG | 0.517915 | 5.1:-53654361 | MS.gene43727:CDS |
CCCTTCCAAAAGAGAAGGAA+AGG | 0.518782 | 5.1:+53648101 | None:intergenic |
ACAACAGCTGGGACTGCAGC+AGG | 0.520425 | 5.1:+53648208 | None:intergenic |
TTTATTGAGCTGGAGCAGAC+AGG | 0.520578 | 5.1:-53653757 | MS.gene43727:CDS |
TTGTTCAAGACATCAACAAA+AGG | 0.521488 | 5.1:+53648712 | None:intergenic |
TGTCCTTGCAGCATGCTACA+AGG | 0.521812 | 5.1:-53648365 | MS.gene43727:CDS |
CCCTGGATCTGATGCACCAA+AGG | 0.525088 | 5.1:-53648284 | MS.gene43727:CDS |
CTACATCGGCACACCCGGCA+AGG | 0.526541 | 5.1:-53649504 | MS.gene43727:CDS |
TATAAGGGTAACTCTAAACT+TGG | 0.526782 | 5.1:-53647965 | MS.gene43727:CDS |
CTAAGGTACTGAAGGACACC+AGG | 0.526807 | 5.1:+53649368 | None:intergenic |
TGGTGGACAGAGTGAGGAAG+AGG | 0.529702 | 5.1:-53648176 | MS.gene43727:CDS |
TCTATCCATGAGAATGCCTA+TGG | 0.529948 | 5.1:-53648502 | MS.gene43727:CDS |
GGAGGTACAAAGAGATATCA+AGG | 0.530634 | 5.1:-53655146 | MS.gene43727:CDS |
TGACTTGGTTGATGGCATTG+AGG | 0.532962 | 5.1:+53648143 | None:intergenic |
ATTGCCAATGCTGCCTACAT+CGG | 0.536003 | 5.1:-53649518 | MS.gene43727:CDS |
GGTAACTCTAAACTTGGTGC+TGG | 0.539715 | 5.1:-53647959 | MS.gene43727:CDS |
TTTCGGCTGTGGTGGAGGAT+AGG | 0.540209 | 5.1:+53654707 | None:intergenic |
GTGTGATACTATCAAGAAGA+TGG | 0.542322 | 5.1:+53654793 | None:intergenic |
AAGCCTAACATGGTTACCCC+TGG | 0.543234 | 5.1:-53648301 | MS.gene43727:CDS |
TTCACGGAGAGCACGTCTGT+TGG | 0.544051 | 5.1:+53649406 | None:intergenic |
CACTCTCTTGAAGCCTAACA+TGG | 0.547031 | 5.1:-53648311 | MS.gene43727:CDS |
CCAAACCATAGGCATTCTCA+TGG | 0.550708 | 5.1:+53648497 | None:intergenic |
TCCACCACAGCCGAAACCAC+CGG | 0.551333 | 5.1:-53654700 | MS.gene43727:CDS |
AAAGAGAAGGAAAGGGTCCA+TGG | 0.554272 | 5.1:+53648109 | None:intergenic |
TGGTGTGGATTAGTGGATAT+GGG | 0.554649 | 5.1:-53653886 | MS.gene43727:CDS |
GGTTCAGCAAAATTATATTG+TGG | 0.556641 | 5.1:-53654133 | MS.gene43727:CDS |
AAGTCAAGGGTAAGAAGCCA+TGG | 0.558340 | 5.1:-53648126 | MS.gene43727:CDS |
TGTGCTAAGTACTATGAAGC+AGG | 0.559793 | 5.1:-53648586 | MS.gene43727:CDS |
TCCTGGTATCAAGGTTGACA+AGG | 0.560548 | 5.1:-53648677 | MS.gene43727:CDS |
GCAGCAAGAATACCCTTGCC+GGG | 0.561946 | 5.1:+53649491 | None:intergenic |
ACTCAGGGTCTTGATGGACT+TGG | 0.562479 | 5.1:-53648616 | MS.gene43727:CDS |
CCAAGGTGGTTCGAAGGTCA+CGG | 0.562682 | 5.1:-53655243 | MS.gene43727:CDS |
CTTGTCTGGTGGACAGAGTG+AGG | 0.562758 | 5.1:-53648182 | MS.gene43727:CDS |
CTCAGAGAGTCTTCATGTGA+AGG | 0.562837 | 5.1:-53647933 | MS.gene43727:CDS |
CCACCCGGATGCCCTGTACA+AGG | 0.564450 | 5.1:+53653676 | None:intergenic |
TGATGGAGAAACCACCACTC+AGG | 0.570496 | 5.1:-53648632 | MS.gene43727:CDS |
AGTGGTCATTTCGAGTGTAG+TGG | 0.570782 | 5.1:-53653830 | MS.gene43727:CDS |
ATGAGTATAGGTGGTTCAAA+CGG | 0.573032 | 5.1:+53654603 | None:intergenic |
CGGTTTAGCTGGTGGTCGAA+GGG | 0.574514 | 5.1:+53654575 | None:intergenic |
GATGGCATTGAGGTTGACAC+TGG | 0.575533 | 5.1:+53648153 | None:intergenic |
GGTAGAGGGTTTCCTCAAAG+AGG | 0.575881 | 5.1:+53649336 | None:intergenic |
CTTTACCAATCATGATGATG+AGG | 0.578122 | 5.1:-53654083 | MS.gene43727:CDS |
TACATCGGCACACCCGGCAA+GGG | 0.581098 | 5.1:-53649503 | MS.gene43727:CDS |
CAGTTGTCACGTAGAAAATG+AGG | 0.581874 | 5.1:-53654544 | MS.gene43727:CDS |
TCATGGATAGAGTGCTCAGA+TGG | 0.581969 | 5.1:+53648514 | None:intergenic |
CCTTTGGTGCATCAGATCCA+GGG | 0.582593 | 5.1:+53648284 | None:intergenic |
GATGGAGAAACCACCACTCA+GGG | 0.584183 | 5.1:-53648631 | MS.gene43727:CDS |
CAATGCCATCAACCAAGTCA+AGG | 0.584504 | 5.1:-53648140 | MS.gene43727:CDS |
GTCAAGGTAACTATAAAGCA+TGG | 0.584604 | 5.1:+53653972 | None:intergenic |
ATCAGTTCCGGCAAGCTCAA+CGG | 0.584893 | 5.1:+53648651 | None:intergenic |
GGAGGTAATGCCAAAACAGA+AGG | 0.585279 | 5.1:+53653925 | None:intergenic |
GGTCACGGATGTGCAGAAAA+GGG | 0.585611 | 5.1:-53655228 | MS.gene43727:CDS |
GAGTGCCTTCAAGGAGGACA+TGG | 0.586352 | 5.1:+53648329 | None:intergenic |
TATCCTTGTACAGGGCATCC+GGG | 0.586905 | 5.1:-53653679 | MS.gene43727:CDS |
GGAATGTGGAAGAACATAAG+TGG | 0.587247 | 5.1:-53654347 | MS.gene43727:CDS |
CAATATGGCGGTTTAGCTGG+TGG | 0.588906 | 5.1:+53654567 | None:intergenic |
TGCACCAAAGGTTGCACCCG+AGG | 0.589398 | 5.1:-53648272 | MS.gene43727:CDS |
CAAAGAGGATGACTCCACTA+AGG | 0.590051 | 5.1:+53649351 | None:intergenic |
AGGTGGTGTGTGCAATGTCA+TGG | 0.591983 | 5.1:+53654889 | None:intergenic |
TGACTCCACTAAGGTACTGA+AGG | 0.592512 | 5.1:+53649360 | None:intergenic |
TATTGGTTCTATGTATGGTG+TGG | 0.592967 | 5.1:-53653901 | MS.gene43727:CDS |
GCATGCTGCAAGGACACGCT+CGG | 0.593245 | 5.1:+53648372 | None:intergenic |
TTATTGAGCTGGAGCAGACA+GGG | 0.596865 | 5.1:-53653756 | MS.gene43727:CDS |
AACAGTCTATGACAATCCTA+AGG | 0.597333 | 5.1:-53654154 | MS.gene43727:CDS |
GAACAACTCCGAGAATTCGC+CGG | 0.599600 | 5.1:-53655206 | MS.gene43727:CDS |
AGCATATCGGGCCAAACCAT+AGG | 0.599950 | 5.1:+53648486 | None:intergenic |
GCATCAAAGATTTAATGGCA+GGG | 0.600672 | 5.1:-53654368 | MS.gene43727:CDS |
AAGTGCCCTTCCAAAAGAGA+AGG | 0.603752 | 5.1:+53648096 | None:intergenic |
AACAGAGTACCCTCAAGGCA+TGG | 0.603839 | 5.1:-53648072 | MS.gene43727:CDS |
GGTGGTTCAAACGGTGACAA+TGG | 0.604713 | 5.1:+53654612 | None:intergenic |
ATGAAAACAATTTATCAGGA+AGG | 0.607596 | 5.1:+53654937 | None:intergenic |
CCATTAAATTCCAATGCAGA+AGG | 0.609854 | 5.1:+53655101 | None:intergenic |
ACTAACCCAAGGTGGTTCGA+AGG | 0.609940 | 5.1:-53655249 | MS.gene43727:CDS |
AATTTCATGACATTGGATTG+TGG | 0.610005 | 5.1:+53654474 | None:intergenic |
AATGCCATCAACCAAGTCAA+GGG | 0.616498 | 5.1:-53648139 | MS.gene43727:CDS |
CCTTCCAAAAGAGAAGGAAA+GGG | 0.621042 | 5.1:+53648102 | None:intergenic |
TCTCTGCATACCAAAAGTCA+AGG | 0.624429 | 5.1:+53653956 | None:intergenic |
TCCATCAAGACCCTGAGTGG+TGG | 0.624702 | 5.1:+53648621 | None:intergenic |
AAATTGATATAAACTGACAC+TGG | 0.625652 | 5.1:+53655002 | None:intergenic |
AGGCCTTGTAGCATGCTGCA+AGG | 0.628730 | 5.1:+53648362 | None:intergenic |
TGGAAGTATGATCATTTGGA+TGG | 0.630669 | 5.1:+53654494 | None:intergenic |
TGTCATGAGGTCCATCAACA+AGG | 0.633917 | 5.1:+53648416 | None:intergenic |
AGTGTGCTCAGCAACAACCT+CGG | 0.636805 | 5.1:+53648255 | None:intergenic |
GAGAATTGCCAAAAGTAGAG+TGG | 0.637109 | 5.1:+53653717 | None:intergenic |
TGCCTTCAAGGAGGACATGG+TGG | 0.637134 | 5.1:+53648332 | None:intergenic |
TCAAGAAGCTTTGTTGACAA+GGG | 0.640371 | 5.1:-53648020 | MS.gene43727:CDS |
TGTGATACTATCAAGAAGAT+GGG | 0.640679 | 5.1:+53654794 | None:intergenic |
AGGGTCATCATGAGTATAGG+TGG | 0.640955 | 5.1:+53654594 | None:intergenic |
CAGACAAGAAAACAACAGCT+GGG | 0.641298 | 5.1:+53648197 | None:intergenic |
GAAAACACTGTCGTTGATGG+AGG | 0.641799 | 5.1:-53655164 | MS.gene43727:CDS |
AAGGGCTAAGGCTAATTCTG+AGG | 0.645764 | 5.1:-53648002 | MS.gene43727:CDS |
CTTTGGTGCATCAGATCCAG+GGG | 0.655083 | 5.1:+53648285 | None:intergenic |
TGTTCCATAACTGTTCAACA+AGG | 0.655854 | 5.1:+53655292 | None:intergenic |
GAGACAACAACTTTGTCCGG+TGG | 0.655953 | 5.1:+53654684 | None:intergenic |
AAGTCCATCAAGACCCTGAG+TGG | 0.657276 | 5.1:+53648618 | None:intergenic |
CATTAGTGTTAAGCAACTGG+AGG | 0.660410 | 5.1:-53653797 | MS.gene43727:CDS |
ACTCTGTACAAGTAGCATTG+TGG | 0.662861 | 5.1:+53654662 | None:intergenic |
TGGAAAAGAAGAAAATGTGA+AGG | 0.663229 | 5.1:-53648047 | MS.gene43727:CDS |
ATAACACAGGTGACATGCGG+TGG | 0.667087 | 5.1:+53654735 | None:intergenic |
ACGTGACAACTGCAATATGG+CGG | 0.668692 | 5.1:+53654555 | None:intergenic |
TAGGAAGCAAGTACCTGCAG+CGG | 0.669563 | 5.1:+53649307 | None:intergenic |
GTACATGGTATCCTTGTACA+GGG | 0.670723 | 5.1:-53653687 | MS.gene43727:CDS |
AATGCTTAGAGAATGTGAAG+TGG | 0.670998 | 5.1:-53653848 | MS.gene43727:CDS |
GTCACGTAGAAAATGAGGCG+TGG | 0.671323 | 5.1:-53654539 | MS.gene43727:CDS |
CCTGGTATCAAGGTTGACAA+GGG | 0.676179 | 5.1:-53648676 | MS.gene43727:CDS |
ACTTCAACAGAGTACCCTCA+AGG | 0.678437 | 5.1:-53648077 | MS.gene43727:CDS |
ACAATAACACAGGTGACATG+CGG | 0.685365 | 5.1:+53654732 | None:intergenic |
TAAGGTACTGAAGGACACCA+GGG | 0.689754 | 5.1:+53649369 | None:intergenic |
CATACATAGAACCAATATGG+AGG | 0.690514 | 5.1:+53653907 | None:intergenic |
AGGATAGGCAACAATAACAC+AGG | 0.702580 | 5.1:+53654722 | None:intergenic |
AGGGAGGTAACACTAACCCA+AGG | 0.703783 | 5.1:-53655260 | MS.gene43727:CDS |
AGTGCTCAGATGGCTCATTG+GGG | 0.704686 | 5.1:+53648524 | None:intergenic |
CTTCACATGAAGACTCTCTG+AGG | 0.707482 | 5.1:+53647934 | None:intergenic |
TCAAGAGAGTGCCTTCAAGG+AGG | 0.717476 | 5.1:+53648323 | None:intergenic |
CCTTGTACAGGGCATCCGGG+TGG | 0.719900 | 5.1:-53653676 | MS.gene43727:intron |
AAGGTAACTATAAAGCATGG+TGG | 0.747504 | 5.1:+53653975 | None:intergenic |
GAGGTAACACTAACCCAAGG+TGG | 0.748503 | 5.1:-53655257 | MS.gene43727:CDS |
AAGGTACTGAAGGACACCAG+GGG | 0.750874 | 5.1:+53649370 | None:intergenic |
GTACTGAAGGACACCAGGGG+CGG | 0.769749 | 5.1:+53649373 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.1 | gene | 53647919 | 53655357 | 53647919 | ID=MS.gene43727 |
chr5.1 | mRNA | 53647919 | 53655357 | 53647919 | ID=MS.gene43727.t1;Parent=MS.gene43727 |
chr5.1 | exon | 53654346 | 53655357 | 53654346 | ID=MS.gene43727.t1.exon1;Parent=MS.gene43727.t1 |
chr5.1 | CDS | 53654346 | 53655357 | 53654346 | ID=cds.MS.gene43727.t1;Parent=MS.gene43727.t1 |
chr5.1 | exon | 53653677 | 53654198 | 53653677 | ID=MS.gene43727.t1.exon2;Parent=MS.gene43727.t1 |
chr5.1 | CDS | 53653677 | 53654198 | 53653677 | ID=cds.MS.gene43727.t1;Parent=MS.gene43727.t1 |
chr5.1 | exon | 53649321 | 53649548 | 53649321 | ID=MS.gene43727.t1.exon3;Parent=MS.gene43727.t1 |
chr5.1 | CDS | 53649321 | 53649548 | 53649321 | ID=cds.MS.gene43727.t1;Parent=MS.gene43727.t1 |
chr5.1 | exon | 53647919 | 53648739 | 53647919 | ID=MS.gene43727.t1.exon4;Parent=MS.gene43727.t1 |
chr5.1 | CDS | 53647919 | 53648739 | 53647919 | ID=cds.MS.gene43727.t1;Parent=MS.gene43727.t1 |
Gene Sequence |
Protein sequence |