Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45552.t1 | XP_003597438.1 | 95.6 | 362 | 8 | 1 | 1 | 354 | 1 | 362 | 1.10E-188 | 669.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45552.t1 | P25083 | 72.7 | 388 | 69 | 5 | 2 | 354 | 1 | 386 | 5.3e-150 | 531.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45552.t1 | G7IUC4 | 95.6 | 362 | 8 | 1 | 1 | 354 | 1 | 362 | 8.3e-189 | 669.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049182 | MS.gene45552 | 0.802277 | 6.06E-49 | -1.69E-46 |
| MS.gene050379 | MS.gene45552 | 0.809273 | 2.05E-50 | -1.69E-46 |
| MS.gene050961 | MS.gene45552 | 0.838002 | 3.72E-57 | -1.69E-46 |
| MS.gene051959 | MS.gene45552 | 0.853116 | 2.96E-61 | -1.69E-46 |
| MS.gene051960 | MS.gene45552 | 0.852213 | 5.35E-61 | -1.69E-46 |
| MS.gene052040 | MS.gene45552 | 0.812555 | 4.00E-51 | -1.69E-46 |
| MS.gene052053 | MS.gene45552 | 0.943749 | 6.85E-103 | -1.69E-46 |
| MS.gene052559 | MS.gene45552 | 0.824797 | 6.65E-54 | -1.69E-46 |
| MS.gene052560 | MS.gene45552 | 0.811654 | 6.28E-51 | -1.69E-46 |
| MS.gene052570 | MS.gene45552 | 0.820735 | 5.86E-53 | -1.69E-46 |
| MS.gene053602 | MS.gene45552 | 0.819614 | 1.06E-52 | -1.69E-46 |
| MS.gene055150 | MS.gene45552 | 0.844967 | 5.45E-59 | -1.69E-46 |
| MS.gene055549 | MS.gene45552 | 0.835753 | 1.40E-56 | -1.69E-46 |
| MS.gene055550 | MS.gene45552 | 0.836982 | 6.80E-57 | -1.69E-46 |
| MS.gene055551 | MS.gene45552 | 0.803675 | 3.11E-49 | -1.69E-46 |
| MS.gene055964 | MS.gene45552 | 0.817097 | 3.93E-52 | -1.69E-46 |
| MS.gene05624 | MS.gene45552 | 0.812985 | 3.22E-51 | -1.69E-46 |
| MS.gene056365 | MS.gene45552 | 0.802713 | 4.92E-49 | -1.69E-46 |
| MS.gene056530 | MS.gene45552 | 0.855706 | 5.27E-62 | -1.69E-46 |
| MS.gene057001 | MS.gene45552 | 0.824122 | 9.58E-54 | -1.69E-46 |
| MS.gene057226 | MS.gene45552 | 0.818546 | 1.85E-52 | -1.69E-46 |
| MS.gene057472 | MS.gene45552 | 0.814915 | 1.21E-51 | -1.69E-46 |
| MS.gene058628 | MS.gene45552 | 0.816042 | 6.78E-52 | -1.69E-46 |
| MS.gene05884 | MS.gene45552 | 0.80217 | 6.37E-49 | -1.69E-46 |
| MS.gene059436 | MS.gene45552 | 0.802516 | 5.41E-49 | -1.69E-46 |
| MS.gene05952 | MS.gene45552 | 0.814685 | 1.36E-51 | -1.69E-46 |
| MS.gene060237 | MS.gene45552 | 0.803723 | 3.04E-49 | -1.69E-46 |
| MS.gene06023 | MS.gene45552 | 0.841433 | 4.77E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45552.t1 | MTR_2g098070 | 95.580 | 362 | 8 | 1 | 1 | 354 | 1 | 362 | 0.0 | 695 |
| MS.gene45552.t1 | MTR_3g028590 | 71.148 | 357 | 92 | 3 | 7 | 354 | 39 | 393 | 8.78e-176 | 494 |
| MS.gene45552.t1 | MTR_3g028590 | 71.148 | 357 | 92 | 3 | 7 | 354 | 35 | 389 | 1.32e-175 | 493 |
| MS.gene45552.t1 | MTR_4g078545 | 69.973 | 373 | 88 | 4 | 2 | 353 | 1 | 370 | 2.00e-174 | 489 |
| MS.gene45552.t1 | MTR_8g036880 | 71.271 | 362 | 87 | 4 | 8 | 354 | 40 | 399 | 8.80e-170 | 479 |
| MS.gene45552.t1 | MTR_8g107270 | 56.140 | 285 | 117 | 1 | 65 | 341 | 17 | 301 | 7.98e-117 | 341 |
| MS.gene45552.t1 | MTR_3g104500 | 38.961 | 308 | 168 | 8 | 55 | 347 | 23 | 325 | 5.14e-64 | 206 |
| MS.gene45552.t1 | MTR_5g009500 | 30.844 | 308 | 168 | 11 | 54 | 328 | 26 | 321 | 2.59e-33 | 126 |
| MS.gene45552.t1 | MTR_8g027975 | 31.699 | 306 | 160 | 12 | 59 | 328 | 44 | 336 | 2.92e-31 | 121 |
| MS.gene45552.t1 | MTR_6g091800 | 27.090 | 299 | 189 | 7 | 62 | 341 | 15 | 303 | 8.98e-30 | 116 |
| MS.gene45552.t1 | MTR_3g104600 | 29.299 | 314 | 176 | 11 | 62 | 344 | 31 | 329 | 9.08e-30 | 117 |
| MS.gene45552.t1 | MTR_7g064980 | 28.667 | 300 | 189 | 9 | 63 | 344 | 22 | 314 | 4.61e-26 | 106 |
| MS.gene45552.t1 | MTR_6g091800 | 25.387 | 323 | 188 | 8 | 62 | 341 | 15 | 327 | 1.24e-25 | 105 |
| MS.gene45552.t1 | MTR_1g012030 | 28.114 | 281 | 168 | 9 | 66 | 333 | 139 | 398 | 1.26e-25 | 107 |
| MS.gene45552.t1 | MTR_1g012030 | 26.923 | 208 | 125 | 6 | 54 | 251 | 221 | 411 | 1.72e-13 | 71.6 |
| MS.gene45552.t1 | MTR_6g091800 | 27.490 | 251 | 157 | 5 | 62 | 297 | 15 | 255 | 6.40e-25 | 102 |
| MS.gene45552.t1 | MTR_6g091800 | 28.571 | 245 | 150 | 5 | 62 | 291 | 15 | 249 | 7.43e-25 | 102 |
| MS.gene45552.t1 | MTR_3g107510 | 27.703 | 296 | 169 | 12 | 69 | 345 | 125 | 394 | 7.79e-25 | 104 |
| MS.gene45552.t1 | MTR_3g107510 | 26.027 | 219 | 135 | 5 | 43 | 251 | 193 | 394 | 4.19e-14 | 73.2 |
| MS.gene45552.t1 | MTR_3g107510 | 29.189 | 185 | 111 | 5 | 163 | 341 | 122 | 292 | 2.13e-13 | 71.2 |
| MS.gene45552.t1 | MTR_6g091800 | 25.649 | 308 | 177 | 7 | 62 | 327 | 15 | 312 | 4.19e-24 | 101 |
| MS.gene45552.t1 | MTR_5g081150 | 26.774 | 310 | 199 | 9 | 52 | 344 | 23 | 321 | 1.03e-22 | 97.4 |
| MS.gene45552.t1 | MTR_7g068340 | 29.577 | 284 | 159 | 10 | 77 | 344 | 98 | 356 | 5.59e-22 | 96.3 |
| MS.gene45552.t1 | MTR_4g114320 | 25.084 | 299 | 179 | 10 | 66 | 345 | 123 | 395 | 1.43e-21 | 95.1 |
| MS.gene45552.t1 | MTR_4g114320 | 27.143 | 210 | 125 | 6 | 52 | 251 | 204 | 395 | 1.78e-14 | 74.3 |
| MS.gene45552.t1 | MTR_6g091800 | 25.455 | 275 | 156 | 6 | 62 | 297 | 15 | 279 | 9.65e-21 | 91.3 |
| MS.gene45552.t1 | MTR_6g091800 | 26.394 | 269 | 149 | 6 | 62 | 291 | 15 | 273 | 1.21e-20 | 90.9 |
| MS.gene45552.t1 | MTR_8g096050 | 27.957 | 279 | 175 | 9 | 66 | 333 | 227 | 490 | 1.49e-20 | 93.2 |
| MS.gene45552.t1 | MTR_2g436930 | 27.687 | 307 | 179 | 10 | 69 | 338 | 18 | 318 | 1.69e-20 | 91.3 |
| MS.gene45552.t1 | MTR_6g034145 | 26.829 | 246 | 158 | 6 | 115 | 341 | 7 | 249 | 2.54e-20 | 89.4 |
| MS.gene45552.t1 | MTR_6g092210 | 26.471 | 238 | 163 | 5 | 115 | 341 | 7 | 243 | 1.43e-19 | 87.4 |
| MS.gene45552.t1 | MTR_4g016730 | 29.592 | 294 | 165 | 11 | 66 | 344 | 89 | 355 | 1.50e-19 | 89.4 |
| MS.gene45552.t1 | MTR_7g084400 | 27.857 | 280 | 171 | 8 | 66 | 333 | 213 | 473 | 6.33e-19 | 88.2 |
| MS.gene45552.t1 | MTR_4g119770 | 25.767 | 326 | 195 | 10 | 54 | 340 | 4 | 321 | 7.10e-19 | 86.7 |
| MS.gene45552.t1 | MTR_3g098460 | 26.970 | 330 | 199 | 14 | 22 | 333 | 163 | 468 | 1.41e-18 | 87.0 |
| MS.gene45552.t1 | MTR_7g066690 | 23.729 | 295 | 201 | 7 | 61 | 345 | 12 | 292 | 1.85e-17 | 82.0 |
| MS.gene45552.t1 | MTR_3g100570 | 25.850 | 294 | 177 | 10 | 66 | 326 | 6 | 291 | 3.89e-16 | 78.6 |
| MS.gene45552.t1 | MTR_6g091800 | 28.177 | 181 | 106 | 4 | 62 | 227 | 15 | 186 | 3.92e-16 | 76.3 |
| MS.gene45552.t1 | MTR_5g030530 | 25.763 | 295 | 191 | 9 | 63 | 338 | 5 | 290 | 9.54e-16 | 77.0 |
| MS.gene45552.t1 | MTR_1g090330 | 22.642 | 265 | 191 | 5 | 64 | 319 | 12 | 271 | 1.66e-15 | 76.6 |
| MS.gene45552.t1 | MTR_1g090330 | 29.762 | 168 | 102 | 6 | 67 | 225 | 112 | 272 | 3.29e-12 | 67.0 |
| MS.gene45552.t1 | MTR_2g102010 | 24.126 | 286 | 192 | 7 | 65 | 338 | 16 | 288 | 1.94e-15 | 76.3 |
| MS.gene45552.t1 | MTR_4g119770 | 26.437 | 261 | 156 | 8 | 54 | 286 | 4 | 256 | 1.97e-15 | 75.9 |
| MS.gene45552.t1 | MTR_2g436930 | 31.795 | 195 | 106 | 6 | 165 | 338 | 40 | 228 | 3.31e-15 | 74.7 |
| MS.gene45552.t1 | MTR_8g066975 | 25.862 | 290 | 197 | 7 | 63 | 338 | 5 | 290 | 4.15e-15 | 75.5 |
| MS.gene45552.t1 | MTR_4g012850 | 26.250 | 240 | 153 | 7 | 115 | 338 | 55 | 286 | 7.97e-15 | 74.7 |
| MS.gene45552.t1 | MTR_6g091910 | 25.248 | 202 | 134 | 5 | 62 | 252 | 15 | 210 | 6.17e-14 | 70.5 |
| MS.gene45552.t1 | MTR_6g091910 | 26.020 | 196 | 135 | 5 | 155 | 341 | 11 | 205 | 6.76e-13 | 67.8 |
| MS.gene45552.t1 | MTR_3g074490 | 26.599 | 297 | 162 | 12 | 69 | 333 | 119 | 391 | 7.04e-14 | 72.8 |
| MS.gene45552.t1 | MTR_4g005330 | 23.390 | 295 | 182 | 8 | 65 | 333 | 65 | 341 | 1.40e-13 | 71.6 |
| MS.gene45552.t1 | MTR_1g088995 | 25.725 | 276 | 177 | 9 | 53 | 319 | 25 | 281 | 1.42e-13 | 70.9 |
| MS.gene45552.t1 | MTR_4g018750 | 24.151 | 265 | 184 | 8 | 57 | 311 | 6 | 263 | 2.31e-13 | 70.1 |
| MS.gene45552.t1 | MTR_4g018750 | 29.268 | 205 | 118 | 8 | 159 | 345 | 11 | 206 | 4.45e-12 | 66.2 |
| MS.gene45552.t1 | MTR_4g005330 | 23.368 | 291 | 179 | 8 | 69 | 333 | 3 | 275 | 1.89e-12 | 67.4 |
| MS.gene45552.t1 | MTR_4g057850 | 24.645 | 211 | 130 | 6 | 67 | 263 | 116 | 311 | 2.31e-12 | 67.4 |
| MS.gene45552.t1 | MTR_5g032420 | 22.145 | 289 | 189 | 7 | 66 | 319 | 6 | 293 | 3.48e-12 | 67.0 |
| MS.gene45552.t1 | MTR_6g091800 | 25.366 | 205 | 105 | 5 | 62 | 227 | 15 | 210 | 4.31e-12 | 65.1 |
| MS.gene45552.t1 | MTR_4g018750 | 29.268 | 205 | 118 | 8 | 159 | 345 | 11 | 206 | 4.60e-12 | 66.2 |
| MS.gene45552.t1 | MTR_3g462140 | 23.183 | 289 | 198 | 7 | 53 | 327 | 2 | 280 | 8.94e-12 | 65.5 |
| MS.gene45552.t1 | MTR_3g462140 | 27.861 | 201 | 127 | 5 | 159 | 345 | 11 | 207 | 1.59e-11 | 64.7 |
| MS.gene45552.t1 | MTR_5g081150 | 28.387 | 155 | 94 | 4 | 52 | 194 | 23 | 172 | 2.19e-11 | 63.9 |
| MS.gene45552.t1 | MTR_5g081150 | 28.387 | 155 | 94 | 4 | 52 | 194 | 23 | 172 | 2.50e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45552.t1 | AT5G13490 | 69.191 | 383 | 85 | 4 | 5 | 354 | 3 | 385 | 1.19e-179 | 503 |
| MS.gene45552.t1 | AT5G13490 | 69.191 | 383 | 85 | 4 | 5 | 354 | 3 | 385 | 1.19e-179 | 503 |
| MS.gene45552.t1 | AT3G08580 | 70.712 | 379 | 76 | 6 | 8 | 354 | 6 | 381 | 1.47e-175 | 493 |
| MS.gene45552.t1 | AT3G08580 | 70.712 | 379 | 76 | 6 | 8 | 354 | 6 | 381 | 1.47e-175 | 493 |
| MS.gene45552.t1 | AT4G28390 | 74.783 | 345 | 71 | 3 | 17 | 353 | 42 | 378 | 7.57e-175 | 491 |
| MS.gene45552.t1 | AT4G28390 | 74.783 | 345 | 71 | 3 | 17 | 353 | 42 | 378 | 7.57e-175 | 491 |
| MS.gene45552.t1 | AT5G17400 | 59.722 | 288 | 108 | 1 | 62 | 341 | 10 | 297 | 6.43e-122 | 353 |
| MS.gene45552.t1 | AT5G56450 | 37.419 | 310 | 167 | 8 | 52 | 341 | 20 | 322 | 4.82e-60 | 196 |
| MS.gene45552.t1 | AT3G55640 | 28.289 | 304 | 193 | 8 | 56 | 342 | 28 | 323 | 3.77e-32 | 123 |
| MS.gene45552.t1 | AT3G55640 | 28.289 | 304 | 193 | 8 | 56 | 342 | 28 | 323 | 3.77e-32 | 123 |
| MS.gene45552.t1 | AT3G53940 | 30.872 | 298 | 177 | 10 | 66 | 344 | 73 | 360 | 9.15e-30 | 117 |
| MS.gene45552.t1 | AT2G37890 | 28.956 | 297 | 186 | 8 | 65 | 344 | 44 | 332 | 1.42e-29 | 116 |
| MS.gene45552.t1 | AT4G01100 | 30.065 | 306 | 165 | 11 | 59 | 328 | 35 | 327 | 1.14e-28 | 114 |
| MS.gene45552.t1 | AT4G26180 | 29.703 | 303 | 179 | 11 | 62 | 342 | 17 | 307 | 7.34e-27 | 108 |
| MS.gene45552.t1 | AT5G01500 | 31.786 | 280 | 158 | 11 | 77 | 344 | 130 | 388 | 1.93e-26 | 109 |
| MS.gene45552.t1 | AT1G14560 | 27.046 | 281 | 171 | 7 | 77 | 333 | 38 | 308 | 2.61e-26 | 107 |
| MS.gene45552.t1 | AT4G26180 | 30.314 | 287 | 167 | 10 | 62 | 327 | 17 | 291 | 4.42e-26 | 105 |
| MS.gene45552.t1 | AT1G14560 | 27.273 | 275 | 166 | 7 | 77 | 327 | 38 | 302 | 9.19e-26 | 105 |
| MS.gene45552.t1 | AT4G01100 | 28.000 | 325 | 171 | 11 | 59 | 333 | 35 | 346 | 9.81e-26 | 106 |
| MS.gene45552.t1 | AT4G01100 | 29.153 | 295 | 160 | 11 | 75 | 333 | 1 | 282 | 2.36e-25 | 104 |
| MS.gene45552.t1 | AT4G32400 | 28.826 | 281 | 166 | 10 | 66 | 333 | 114 | 373 | 3.33e-24 | 102 |
| MS.gene45552.t1 | AT4G32400 | 28.962 | 183 | 114 | 5 | 163 | 341 | 114 | 284 | 2.37e-12 | 68.2 |
| MS.gene45552.t1 | AT4G32400 | 28.061 | 196 | 113 | 7 | 67 | 251 | 208 | 386 | 3.14e-11 | 64.7 |
| MS.gene45552.t1 | AT3G51870 | 30.986 | 284 | 155 | 13 | 77 | 344 | 102 | 360 | 1.07e-23 | 101 |
| MS.gene45552.t1 | AT1G14560 | 30.500 | 200 | 121 | 5 | 162 | 344 | 24 | 222 | 4.58e-23 | 96.7 |
| MS.gene45552.t1 | AT3G21390 | 27.742 | 310 | 177 | 9 | 69 | 338 | 22 | 324 | 1.45e-21 | 94.4 |
| MS.gene45552.t1 | AT3G21390 | 27.742 | 310 | 177 | 9 | 69 | 338 | 44 | 346 | 1.97e-21 | 94.4 |
| MS.gene45552.t1 | AT5G48970 | 27.974 | 311 | 176 | 10 | 69 | 338 | 25 | 328 | 2.78e-21 | 93.6 |
| MS.gene45552.t1 | AT5G51050 | 29.052 | 327 | 193 | 13 | 22 | 333 | 181 | 483 | 1.57e-19 | 90.1 |
| MS.gene45552.t1 | AT3G55640 | 26.339 | 224 | 144 | 5 | 56 | 266 | 28 | 243 | 1.78e-18 | 84.3 |
| MS.gene45552.t1 | AT3G55640 | 26.339 | 224 | 144 | 5 | 56 | 266 | 28 | 243 | 1.78e-18 | 84.3 |
| MS.gene45552.t1 | AT3G54110 | 24.752 | 303 | 206 | 9 | 57 | 349 | 6 | 296 | 3.67e-18 | 84.3 |
| MS.gene45552.t1 | AT3G20240 | 23.232 | 297 | 184 | 8 | 63 | 333 | 49 | 327 | 1.48e-17 | 83.2 |
| MS.gene45552.t1 | AT3G53940 | 30.435 | 207 | 120 | 6 | 66 | 258 | 73 | 269 | 3.64e-17 | 81.3 |
| MS.gene45552.t1 | AT5G48970 | 28.235 | 255 | 142 | 8 | 118 | 338 | 10 | 257 | 5.66e-17 | 80.1 |
| MS.gene45552.t1 | AT5G61810 | 25.623 | 281 | 171 | 9 | 66 | 333 | 65 | 320 | 7.58e-17 | 80.9 |
| MS.gene45552.t1 | AT5G61810 | 25.623 | 281 | 171 | 9 | 66 | 333 | 208 | 463 | 2.04e-16 | 80.5 |
| MS.gene45552.t1 | AT5G58970 | 23.297 | 279 | 191 | 7 | 61 | 326 | 11 | 279 | 8.51e-16 | 77.4 |
| MS.gene45552.t1 | AT5G58970 | 29.949 | 197 | 119 | 7 | 159 | 341 | 12 | 203 | 1.11e-13 | 71.2 |
| MS.gene45552.t1 | AT1G79900 | 29.289 | 239 | 138 | 8 | 115 | 338 | 55 | 277 | 1.93e-15 | 76.3 |
| MS.gene45552.t1 | AT5G07320 | 25.185 | 270 | 168 | 8 | 75 | 333 | 218 | 464 | 3.54e-15 | 77.0 |
| MS.gene45552.t1 | AT5G46800 | 26.689 | 296 | 186 | 9 | 65 | 338 | 7 | 293 | 7.06e-14 | 71.6 |
| MS.gene45552.t1 | AT5G46800 | 26.689 | 296 | 186 | 9 | 65 | 338 | 7 | 293 | 7.06e-14 | 71.6 |
| MS.gene45552.t1 | AT5G46800 | 26.689 | 296 | 186 | 9 | 65 | 338 | 7 | 293 | 7.06e-14 | 71.6 |
| MS.gene45552.t1 | AT5G58970 | 29.949 | 197 | 119 | 6 | 159 | 341 | 12 | 203 | 9.65e-14 | 70.9 |
| MS.gene45552.t1 | AT5G66380 | 29.146 | 199 | 119 | 5 | 162 | 348 | 9 | 197 | 1.07e-13 | 71.2 |
| MS.gene45552.t1 | AT1G14140 | 28.283 | 198 | 124 | 6 | 163 | 348 | 18 | 209 | 7.37e-13 | 68.9 |
| MS.gene45552.t1 | AT1G14140 | 23.333 | 270 | 192 | 5 | 60 | 319 | 10 | 274 | 1.77e-12 | 67.8 |
| MS.gene45552.t1 | AT5G09470 | 27.397 | 219 | 137 | 7 | 114 | 319 | 97 | 306 | 3.21e-12 | 67.4 |
| MS.gene45552.t1 | AT5G64970 | 26.014 | 296 | 165 | 12 | 69 | 333 | 138 | 410 | 5.89e-12 | 67.0 |
| MS.gene45552.t1 | AT2G33820 | 28.571 | 189 | 119 | 6 | 154 | 334 | 13 | 193 | 6.28e-12 | 65.9 |
| MS.gene45552.t1 | AT4G03115 | 23.048 | 269 | 183 | 8 | 59 | 319 | 31 | 283 | 1.27e-11 | 65.1 |
| MS.gene45552.t1 | AT2G33820 | 22.368 | 304 | 211 | 9 | 62 | 348 | 14 | 309 | 1.56e-11 | 65.1 |
| MS.gene45552.t1 | AT1G25380 | 28.977 | 176 | 113 | 4 | 176 | 344 | 34 | 204 | 2.00e-11 | 65.1 |
| MS.gene45552.t1 | AT1G25380 | 28.977 | 176 | 113 | 4 | 176 | 344 | 34 | 204 | 2.00e-11 | 65.1 |
| MS.gene45552.t1 | AT4G27940 | 23.462 | 260 | 165 | 8 | 106 | 337 | 146 | 399 | 2.18e-11 | 65.1 |
| MS.gene45552.t1 | AT4G03115 | 23.420 | 269 | 182 | 9 | 59 | 319 | 63 | 315 | 2.30e-11 | 64.7 |
| MS.gene45552.t1 | AT5G64970 | 25.676 | 296 | 166 | 12 | 69 | 333 | 14 | 286 | 4.37e-11 | 63.5 |
| MS.gene45552.t1 | AT5G64970 | 26.298 | 289 | 159 | 12 | 69 | 326 | 138 | 403 | 4.47e-11 | 64.3 |
Find 68 sgRNAs with CRISPR-Local
Find 127 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCACCTTTGAAGAGAGATTT+TGG | 0.201047 | 2.1:-6200071 | None:intergenic |
| GTGTACCGTGGTTTGTATTT+TGG | 0.236923 | 2.1:+6199064 | MS.gene45552:CDS |
| GCTCTTGGTAGGAACGTTTC+AGG | 0.238857 | 2.1:+6199111 | MS.gene45552:CDS |
| CCTCTCTCCACCTTTCTTTG+TGG | 0.257660 | 2.1:-6198942 | None:intergenic |
| CTTATGTTGGGAAAGAAATA+TGG | 0.285268 | 2.1:+6200161 | MS.gene45552:CDS |
| TCCACCTTTCTTTGTGGACT+TGG | 0.295445 | 2.1:-6198936 | None:intergenic |
| AAGGGTATTGGAGATTGTTT+TGG | 0.320804 | 2.1:+6198543 | MS.gene45552:CDS |
| AGCAAGAGAGAGATGGATAT+TGG | 0.356655 | 2.1:+6198810 | MS.gene45552:CDS |
| GGCTTCAATGTTTCAGTTGT+TGG | 0.362007 | 2.1:+6199034 | MS.gene45552:CDS |
| TGTAAAGTACAAGAGTTCTT+TGG | 0.375179 | 2.1:+6200016 | MS.gene45552:CDS |
| AAATCAAGATGAGATGATTA+AGG | 0.376906 | 2.1:+6198497 | MS.gene45552:CDS |
| TGCAAGTTATGATAAACTTC+AGG | 0.383169 | 2.1:+6200136 | MS.gene45552:CDS |
| ATGAAGGATTTACTTCGCTT+TGG | 0.383588 | 2.1:+6198580 | MS.gene45552:CDS |
| AGAAGCTTCACGCGCTCAAT+AGG | 0.386608 | 2.1:-6198468 | None:intergenic |
| TTTGTGCTACTGTTGGGTAT+TGG | 0.390598 | 2.1:-6198245 | None:intergenic |
| AACTGTTTCTGAAACAGAAC+AGG | 0.406642 | 2.1:-6198330 | None:intergenic |
| CTTCGAGCAGTTGCTGGTGC+TGG | 0.406961 | 2.1:+6200107 | MS.gene45552:CDS |
| TTCCGTCTTTGTTTACTCGT+TGG | 0.409566 | 2.1:+6198883 | MS.gene45552:CDS |
| TTGCAATCAGATGGTATTGC+TGG | 0.410642 | 2.1:+6199001 | MS.gene45552:CDS |
| AACATTCTTCGAGCAGTTGC+TGG | 0.413671 | 2.1:+6200101 | MS.gene45552:CDS |
| GGAAGAACAGTTAAAGATGA+AGG | 0.423659 | 2.1:+6198564 | MS.gene45552:CDS |
| CCACATATTGCAAATTCCTA+TGG | 0.426920 | 2.1:+6198294 | MS.gene45552:CDS |
| AAACTTCAGGTGCTTATGTT+GGG | 0.430704 | 2.1:+6200149 | MS.gene45552:CDS |
| TGGACTTGGCGTCGCTTGCA+AGG | 0.430839 | 2.1:-6198922 | None:intergenic |
| TAGCTAGCTTTGCCCTAGGA+TGG | 0.434987 | 2.1:+6199913 | MS.gene45552:CDS |
| CCAACAGTAGCACAAAAGTT+TGG | 0.442652 | 2.1:+6198252 | MS.gene45552:CDS |
| GGATATTGGAAAGTCTTTGC+AGG | 0.443053 | 2.1:+6198824 | MS.gene45552:CDS |
| TTCTCTTAAGCCAGTGCTCT+TGG | 0.444590 | 2.1:+6199096 | MS.gene45552:CDS |
| CAACTGTAACAGCCCATCCT+AGG | 0.444717 | 2.1:-6199926 | None:intergenic |
| TCTGAGCCTTACAAGGGTAT+TGG | 0.448802 | 2.1:+6198531 | MS.gene45552:CDS |
| ATTGCATCTGGTGCTGCAGC+AGG | 0.453223 | 2.1:+6198851 | MS.gene45552:CDS |
| TTGGGAAAGAAATATGGTTC+TGG | 0.461893 | 2.1:+6200167 | MS.gene45552:CDS |
| TGGAACAAACACTGCATTTG+AGG | 0.462013 | 2.1:-6198358 | None:intergenic |
| TTTGCAGGAAATATTGCATC+TGG | 0.462558 | 2.1:+6198839 | MS.gene45552:CDS |
| CAATCTCCAATACCCTTGTA+AGG | 0.475979 | 2.1:-6198537 | None:intergenic |
| AGCTAGCTTTGCCCTAGGAT+GGG | 0.478146 | 2.1:+6199914 | MS.gene45552:CDS |
| AAATCTCTCTTCAAAGGTGC+TGG | 0.485223 | 2.1:+6200074 | MS.gene45552:CDS |
| TAAACTTCAGGTGCTTATGT+TGG | 0.486307 | 2.1:+6200148 | MS.gene45552:CDS |
| CCATAGGAATTTGCAATATG+TGG | 0.487479 | 2.1:-6198294 | None:intergenic |
| CATTGATGATGGCTGATAAG+AGG | 0.495678 | 2.1:+6198220 | None:intergenic |
| GACGCCAAGTCCACAAAGAA+AGG | 0.507037 | 2.1:+6198932 | MS.gene45552:CDS |
| TTCCTAGCTAGCTTTGCCCT+AGG | 0.508251 | 2.1:+6199909 | MS.gene45552:CDS |
| TAGGCTCTCTGAGCCTTACA+AGG | 0.509331 | 2.1:+6198524 | MS.gene45552:CDS |
| AGAAGAATGATGATGACATC+AGG | 0.514497 | 2.1:+6199987 | MS.gene45552:CDS |
| TCACAAATTGTGAAAACTGA+AGG | 0.528718 | 2.1:+6200047 | MS.gene45552:CDS |
| CTTCTACGAACAGTGTCTAA+AGG | 0.537254 | 2.1:-6199969 | None:intergenic |
| ATCCTAGGGCAAAGCTAGCT+AGG | 0.537911 | 2.1:-6199911 | None:intergenic |
| CTTAAGCCAGTGCTCTTGGT+AGG | 0.545019 | 2.1:+6199100 | MS.gene45552:CDS |
| GGTCCAAAATCTCTCTTCAA+AGG | 0.557932 | 2.1:+6200068 | MS.gene45552:CDS |
| CAAGATGAGATGATTAAGGC+TGG | 0.558576 | 2.1:+6198501 | MS.gene45552:CDS |
| GGTGGAGAGAGGCAATTCAA+TGG | 0.564939 | 2.1:+6198953 | MS.gene45552:CDS |
| AACTTCAAGCAAGAGAGAGA+TGG | 0.570273 | 2.1:+6198803 | MS.gene45552:CDS |
| CTAGGATGGGCTGTTACAGT+TGG | 0.574759 | 2.1:+6199927 | MS.gene45552:CDS |
| CATATTGCAAATTCCTATGG+AGG | 0.577721 | 2.1:+6198297 | MS.gene45552:CDS |
| GGAAAGAAATATGGTTCTGG+TGG | 0.583008 | 2.1:+6200170 | MS.gene45552:CDS |
| ATGAGATGATTAAGGCTGGT+AGG | 0.586726 | 2.1:+6198505 | MS.gene45552:CDS |
| AAGAAGACATTGCAATCAGA+TGG | 0.590470 | 2.1:+6198992 | MS.gene45552:CDS |
| AACTGTAACAGCCCATCCTA+GGG | 0.595417 | 2.1:-6199925 | None:intergenic |
| GGATTTACTTCGCTTTGGAG+AGG | 0.595722 | 2.1:+6198585 | MS.gene45552:CDS |
| AAAGTAACGGATAACATTGA+CGG | 0.603182 | 2.1:-6198613 | None:intergenic |
| GGTATTGCTGGTCTTTATCG+CGG | 0.608830 | 2.1:+6199013 | MS.gene45552:CDS |
| AACGTTCCTACCAAGAGCAC+TGG | 0.609300 | 2.1:-6199106 | None:intergenic |
| CCACAAAGAAAGGTGGAGAG+AGG | 0.610004 | 2.1:+6198942 | MS.gene45552:CDS |
| ATCCAACGAGTAAACAAAGA+CGG | 0.620833 | 2.1:-6198885 | None:intergenic |
| GCCAAGTCCACAAAGAAAGG+TGG | 0.630796 | 2.1:+6198935 | MS.gene45552:CDS |
| ACAGTCCAAAATACAAACCA+CGG | 0.665396 | 2.1:-6199069 | None:intergenic |
| GTTGGAATCATTGTGTACCG+TGG | 0.672437 | 2.1:+6199052 | MS.gene45552:CDS |
| AGGCTCTCTGAGCCTTACAA+GGG | 0.675743 | 2.1:+6198525 | MS.gene45552:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTTTTAAAATATTGGTA+GGG | + | chr2.1:6199663-6199682 | MS.gene45552:intron | 10.0% |
| !! | TATATTAAAAAGTAGAAAAC+CGG | + | chr2.1:6199540-6199559 | MS.gene45552:intron | 15.0% |
| !!! | AATTTTTAAAATATTGGTAG+GGG | + | chr2.1:6199664-6199683 | MS.gene45552:intron | 15.0% |
| !!! | ATATTGTTTTACAAAATTTC+AGG | + | chr2.1:6199881-6199900 | MS.gene45552:intron | 15.0% |
| !!! | CAAATTTTTAAAATATTGGT+AGG | + | chr2.1:6199662-6199681 | MS.gene45552:intron | 15.0% |
| !!! | TCGTCAAATTTTTAAAATAT+TGG | + | chr2.1:6199658-6199677 | MS.gene45552:intron | 15.0% |
| !! | AAAGAGAAAAAAGTTAGTTA+AGG | + | chr2.1:6199305-6199324 | MS.gene45552:intron | 20.0% |
| !! | AATTTGACGAAACAAAAATT+TGG | - | chr2.1:6199648-6199667 | None:intergenic | 20.0% |
| !! | TAACATGATTAATCTATTAC+AGG | + | chr2.1:6198739-6198758 | MS.gene45552:intron | 20.0% |
| !!! | ACTGCATTAATTATTTCTTT+AGG | + | chr2.1:6198664-6198683 | MS.gene45552:intron | 20.0% |
| ! | AAATCAAGATGAGATGATTA+AGG | + | chr2.1:6198497-6198516 | MS.gene45552:CDS | 25.0% |
| ! | AATCAGAATGTGTTACAATT+AGG | + | chr2.1:6199600-6199619 | MS.gene45552:intron | 25.0% |
| ! | AATGCAGTTGAAAATTTGAA+AGG | - | chr2.1:6198652-6198671 | None:intergenic | 25.0% |
| ! | AGATTAATCATGTTAGACAT+TGG | - | chr2.1:6198734-6198753 | None:intergenic | 25.0% |
| ! | AGTACAAAGTTAAAATACCA+TGG | - | chr2.1:6199699-6199718 | None:intergenic | 25.0% |
| ! | CGAAAATGTAATTTAGACAT+TGG | - | chr2.1:6198690-6198709 | None:intergenic | 25.0% |
| !!! | CGATGTTTTAAAATCCAAAT+CGG | + | chr2.1:6199426-6199445 | MS.gene45552:intron | 25.0% |
| !!! | TATTTTAGAGCAGCAAATTT+TGG | - | chr2.1:6199864-6199883 | None:intergenic | 25.0% |
| ACTGTAGTTGAACTATGATT+AGG | - | chr2.1:6199472-6199491 | None:intergenic | 30.0% | |
| AGATTGTCTTACTATGGATT+TGG | + | chr2.1:6199199-6199218 | MS.gene45552:intron | 30.0% | |
| ATATTCACATAAGTGAGTAG+GGG | + | chr2.1:6199402-6199421 | MS.gene45552:intron | 30.0% | |
| CATATTCACATAAGTGAGTA+GGG | + | chr2.1:6199401-6199420 | MS.gene45552:intron | 30.0% | |
| CCATAGTAAGACAATCTTTA+AGG | - | chr2.1:6199196-6199215 | None:intergenic | 30.0% | |
| CCTCTTCTATTTATCCTTTA+AGG | - | chr2.1:6199274-6199293 | None:intergenic | 30.0% | |
| CCTTAAAGATTGTCTTACTA+TGG | + | chr2.1:6199193-6199212 | MS.gene45552:intron | 30.0% | |
| CCTTAAAGGATAAATAGAAG+AGG | + | chr2.1:6199271-6199290 | MS.gene45552:intron | 30.0% | |
| CTTATGTTGGGAAAGAAATA+TGG | + | chr2.1:6200161-6200180 | MS.gene45552:CDS | 30.0% | |
| TAACCTTATGAATTGCATAG+CGG | + | chr2.1:6199727-6199746 | MS.gene45552:intron | 30.0% | |
| TCACAAATTGTGAAAACTGA+AGG | + | chr2.1:6200047-6200066 | MS.gene45552:CDS | 30.0% | |
| TCATATTCACATAAGTGAGT+AGG | + | chr2.1:6199400-6199419 | MS.gene45552:intron | 30.0% | |
| TGCAAGTTATGATAAACTTC+AGG | + | chr2.1:6200136-6200155 | MS.gene45552:CDS | 30.0% | |
| TGTAAAGTACAAGAGTTCTT+TGG | + | chr2.1:6200016-6200035 | MS.gene45552:CDS | 30.0% | |
| ! | GATGAAGATTTTGAACATGA+CGG | + | chr2.1:6199327-6199346 | MS.gene45552:intron | 30.0% |
| !! | AAAGTAACGGATAACATTGA+CGG | - | chr2.1:6198616-6198635 | None:intergenic | 30.0% |
| AAACCTGTGTTGGAAAGTAA+CGG | - | chr2.1:6198629-6198648 | None:intergenic | 35.0% | |
| AAACTTCAGGTGCTTATGTT+GGG | + | chr2.1:6200149-6200168 | MS.gene45552:CDS | 35.0% | |
| AAGAAGACATTGCAATCAGA+TGG | + | chr2.1:6198992-6199011 | MS.gene45552:CDS | 35.0% | |
| ACAGTCCAAAATACAAACCA+CGG | - | chr2.1:6199072-6199091 | None:intergenic | 35.0% | |
| ACCAATACGCAGAAAAAATG+TGG | + | chr2.1:6199238-6199257 | MS.gene45552:intron | 35.0% | |
| ATCCAACGAGTAAACAAAGA+CGG | - | chr2.1:6198888-6198907 | None:intergenic | 35.0% | |
| ATGAAGGATTTACTTCGCTT+TGG | + | chr2.1:6198580-6198599 | MS.gene45552:CDS | 35.0% | |
| ATTTGAAAGGAAACCTGTGT+TGG | - | chr2.1:6198639-6198658 | None:intergenic | 35.0% | |
| CACTAGTTCAATTTCCGATT+TGG | - | chr2.1:6199443-6199462 | None:intergenic | 35.0% | |
| CATATTGCAAATTCCTATGG+AGG | + | chr2.1:6198297-6198316 | MS.gene45552:CDS | 35.0% | |
| CCAATACGCAGAAAAAATGT+GGG | + | chr2.1:6199239-6199258 | MS.gene45552:intron | 35.0% | |
| CCACATATTGCAAATTCCTA+TGG | + | chr2.1:6198294-6198313 | MS.gene45552:CDS | 35.0% | |
| CCATAGGAATTTGCAATATG+TGG | - | chr2.1:6198297-6198316 | None:intergenic | 35.0% | |
| GGAAGAACAGTTAAAGATGA+AGG | + | chr2.1:6198564-6198583 | MS.gene45552:CDS | 35.0% | |
| GTAACACATTCTGATTGAAC+CGG | - | chr2.1:6199596-6199615 | None:intergenic | 35.0% | |
| GTAGTTGAACTATGATTAGG+AGG | - | chr2.1:6199469-6199488 | None:intergenic | 35.0% | |
| GTCGAAAATGTTGACACAAT+TGG | + | chr2.1:6199774-6199793 | MS.gene45552:intron | 35.0% | |
| TAAACTTCAGGTGCTTATGT+TGG | + | chr2.1:6200148-6200167 | MS.gene45552:CDS | 35.0% | |
| TGTTGACACAATTGGAGTAT+TGG | + | chr2.1:6199782-6199801 | MS.gene45552:intron | 35.0% | |
| TTGGGAAAGAAATATGGTTC+TGG | + | chr2.1:6200167-6200186 | MS.gene45552:CDS | 35.0% | |
| TTTCCGCTATGCAATTCATA+AGG | - | chr2.1:6199733-6199752 | None:intergenic | 35.0% | |
| TTTGCAGGAAATATTGCATC+TGG | + | chr2.1:6198839-6198858 | MS.gene45552:CDS | 35.0% | |
| ! | AAGTTTTTCTCTGATGGAGA+TGG | - | chr2.1:6198381-6198400 | None:intergenic | 35.0% |
| ! | AGAAGAATGATGATGACATC+AGG | + | chr2.1:6199987-6200006 | MS.gene45552:CDS | 35.0% |
| ! | CGCTTTGTTGTGTGTTAATT+AGG | + | chr2.1:6198708-6198727 | MS.gene45552:intron | 35.0% |
| ! | CTTGCAAAGTTTTTCTCTGA+TGG | - | chr2.1:6198387-6198406 | None:intergenic | 35.0% |
| !! | AACTGTTTCTGAAACAGAAC+AGG | - | chr2.1:6198333-6198352 | None:intergenic | 35.0% |
| !! | CAAACTTTTGTGCTACTGTT+GGG | - | chr2.1:6198254-6198273 | None:intergenic | 35.0% |
| !! | TGAAGTCTTGTTTGTTCAAC+CGG | - | chr2.1:6199562-6199581 | None:intergenic | 35.0% |
| !! | TTTGCGACTGATTTTCTCAT+GGG | + | chr2.1:6198408-6198427 | MS.gene45552:CDS | 35.0% |
| !!! | AAGGGTATTGGAGATTGTTT+TGG | + | chr2.1:6198543-6198562 | MS.gene45552:CDS | 35.0% |
| AACTTCAAGCAAGAGAGAGA+TGG | + | chr2.1:6198803-6198822 | MS.gene45552:CDS | 40.0% | |
| AATTTGGACAGATCGCTGTT+TGG | - | chr2.1:6199632-6199651 | None:intergenic | 40.0% | |
| AGACTTCAACCAGTTCAATC+CGG | + | chr2.1:6199574-6199593 | MS.gene45552:intron | 40.0% | |
| AGCAAGAGAGAGATGGATAT+TGG | + | chr2.1:6198810-6198829 | MS.gene45552:CDS | 40.0% | |
| ATACGCAGAAAAAATGTGGG+AGG | + | chr2.1:6199242-6199261 | MS.gene45552:intron | 40.0% | |
| ATGAGATGATTAAGGCTGGT+AGG | + | chr2.1:6198505-6198524 | MS.gene45552:CDS | 40.0% | |
| CAAGATGAGATGATTAAGGC+TGG | + | chr2.1:6198501-6198520 | MS.gene45552:CDS | 40.0% | |
| CAATCTCCAATACCCTTGTA+AGG | - | chr2.1:6198540-6198559 | None:intergenic | 40.0% | |
| CCAACAGTAGCACAAAAGTT+TGG | + | chr2.1:6198252-6198271 | MS.gene45552:CDS | 40.0% | |
| CTTCTACGAACAGTGTCTAA+AGG | - | chr2.1:6199972-6199991 | None:intergenic | 40.0% | |
| GGATATTGGAAAGTCTTTGC+AGG | + | chr2.1:6198824-6198843 | MS.gene45552:CDS | 40.0% | |
| GGCTTCAATGTTTCAGTTGT+TGG | + | chr2.1:6199034-6199053 | MS.gene45552:CDS | 40.0% | |
| GGTCCAAAATCTCTCTTCAA+AGG | + | chr2.1:6200068-6200087 | MS.gene45552:CDS | 40.0% | |
| TGGAACAAACACTGCATTTG+AGG | - | chr2.1:6198361-6198380 | None:intergenic | 40.0% | |
| TTGCAATCAGATGGTATTGC+TGG | + | chr2.1:6199001-6199020 | MS.gene45552:CDS | 40.0% | |
| ! | AAATCTCTCTTCAAAGGTGC+TGG | + | chr2.1:6200074-6200093 | MS.gene45552:CDS | 40.0% |
| ! | AGGTTTTTCTGAACCTCCAT+AGG | - | chr2.1:6198313-6198332 | None:intergenic | 40.0% |
| ! | CAACATTTTCGACTGTAGAG+TGG | - | chr2.1:6199767-6199786 | None:intergenic | 40.0% |
| ! | GTGGGAGGTTTTTACCTTAA+AGG | + | chr2.1:6199257-6199276 | MS.gene45552:intron | 40.0% |
| ! | TATCCGTTACTTTCCAACAC+AGG | + | chr2.1:6198623-6198642 | MS.gene45552:intron | 40.0% |
| ! | TTCCGTCTTTGTTTACTCGT+TGG | + | chr2.1:6198883-6198902 | MS.gene45552:CDS | 40.0% |
| ! | TTTGTGCTACTGTTGGGTAT+TGG | - | chr2.1:6198248-6198267 | None:intergenic | 40.0% |
| !! | CCAAACTTTTGTGCTACTGT+TGG | - | chr2.1:6198255-6198274 | None:intergenic | 40.0% |
| !! | CTTTGCGACTGATTTTCTCA+TGG | + | chr2.1:6198407-6198426 | MS.gene45552:CDS | 40.0% |
| !! | GCACCTTTGAAGAGAGATTT+TGG | - | chr2.1:6200074-6200093 | None:intergenic | 40.0% |
| !! | GGAAAGAAATATGGTTCTGG+TGG | + | chr2.1:6200170-6200189 | MS.gene45552:CDS | 40.0% |
| !! | GTGTACCGTGGTTTGTATTT+TGG | + | chr2.1:6199064-6199083 | MS.gene45552:CDS | 40.0% |
| !!! | CCCACATTTTTTCTGCGTAT+TGG | - | chr2.1:6199242-6199261 | None:intergenic | 40.0% |
| !!! | CGTATTGGTTTTGACATGAG+AGG | - | chr2.1:6199227-6199246 | None:intergenic | 40.0% |
| AACATTCTTCGAGCAGTTGC+TGG | + | chr2.1:6200101-6200120 | MS.gene45552:CDS | 45.0% | |
| AACTGTAACAGCCCATCCTA+GGG | - | chr2.1:6199928-6199947 | None:intergenic | 45.0% | |
| CTGATTGAACCGGATTGAAC+TGG | - | chr2.1:6199586-6199605 | None:intergenic | 45.0% | |
| GTTGGAATCATTGTGTACCG+TGG | + | chr2.1:6199052-6199071 | MS.gene45552:CDS | 45.0% | |
| TCCACCTTTCTTTGTGGACT+TGG | - | chr2.1:6198939-6198958 | None:intergenic | 45.0% | |
| TTCTCTTAAGCCAGTGCTCT+TGG | + | chr2.1:6199096-6199115 | MS.gene45552:CDS | 45.0% | |
| ! | GAACGTTTCAGGTAAGAGTG+AGG | + | chr2.1:6199122-6199141 | MS.gene45552:intron | 45.0% |
| ! | TCTGAGCCTTACAAGGGTAT+TGG | + | chr2.1:6198531-6198550 | MS.gene45552:CDS | 45.0% |
| !! | GGATTTACTTCGCTTTGGAG+AGG | + | chr2.1:6198585-6198604 | MS.gene45552:CDS | 45.0% |
| !! | GGTATTGCTGGTCTTTATCG+CGG | + | chr2.1:6199013-6199032 | MS.gene45552:CDS | 45.0% |
| AGAAGCTTCACGCGCTCAAT+AGG | - | chr2.1:6198471-6198490 | None:intergenic | 50.0% | |
| AGGCTCTCTGAGCCTTACAA+GGG | + | chr2.1:6198525-6198544 | MS.gene45552:CDS | 50.0% | |
| ATCCTAGGGCAAAGCTAGCT+AGG | - | chr2.1:6199914-6199933 | None:intergenic | 50.0% | |
| CAACTGTAACAGCCCATCCT+AGG | - | chr2.1:6199929-6199948 | None:intergenic | 50.0% | |
| CCACAAAGAAAGGTGGAGAG+AGG | + | chr2.1:6198942-6198961 | MS.gene45552:CDS | 50.0% | |
| CCTCTCTCCACCTTTCTTTG+TGG | - | chr2.1:6198945-6198964 | None:intergenic | 50.0% | |
| CTTAAGCCAGTGCTCTTGGT+AGG | + | chr2.1:6199100-6199119 | MS.gene45552:CDS | 50.0% | |
| GACGCCAAGTCCACAAAGAA+AGG | + | chr2.1:6198932-6198951 | MS.gene45552:CDS | 50.0% | |
| GCCAAGTCCACAAAGAAAGG+TGG | + | chr2.1:6198935-6198954 | MS.gene45552:CDS | 50.0% | |
| GCTCTTGGTAGGAACGTTTC+AGG | + | chr2.1:6199111-6199130 | MS.gene45552:CDS | 50.0% | |
| GGTAGGGGCAGATTAAACCA+TGG | + | chr2.1:6199679-6199698 | MS.gene45552:intron | 50.0% | |
| GGTGGAGAGAGGCAATTCAA+TGG | + | chr2.1:6198953-6198972 | MS.gene45552:CDS | 50.0% | |
| TAGGCTCTCTGAGCCTTACA+AGG | + | chr2.1:6198524-6198543 | MS.gene45552:CDS | 50.0% | |
| TTCGACTGTAGAGTGGCTTG+AGG | - | chr2.1:6199760-6199779 | None:intergenic | 50.0% | |
| ! | AACGTTCCTACCAAGAGCAC+TGG | - | chr2.1:6199109-6199128 | None:intergenic | 50.0% |
| !! | AGCTAGCTTTGCCCTAGGAT+GGG | + | chr2.1:6199914-6199933 | MS.gene45552:CDS | 50.0% |
| !! | CTAGGATGGGCTGTTACAGT+TGG | + | chr2.1:6199927-6199946 | MS.gene45552:CDS | 50.0% |
| !! | GCGACTGATTTTCTCATGGG+TGG | + | chr2.1:6198411-6198430 | MS.gene45552:CDS | 50.0% |
| !! | TAGCTAGCTTTGCCCTAGGA+TGG | + | chr2.1:6199913-6199932 | MS.gene45552:CDS | 50.0% |
| !! | TTCCTAGCTAGCTTTGCCCT+AGG | + | chr2.1:6199909-6199928 | MS.gene45552:CDS | 50.0% |
| !! | ATTGCATCTGGTGCTGCAGC+AGG | + | chr2.1:6198851-6198870 | MS.gene45552:CDS | 55.0% |
| CTTCGAGCAGTTGCTGGTGC+TGG | + | chr2.1:6200107-6200126 | MS.gene45552:CDS | 60.0% | |
| TGGACTTGGCGTCGCTTGCA+AGG | - | chr2.1:6198925-6198944 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.1 | gene | 6198225 | 6200199 | 6198225 | ID=MS.gene45552 |
| chr2.1 | mRNA | 6198225 | 6200199 | 6198225 | ID=MS.gene45552.t1;Parent=MS.gene45552 |
| chr2.1 | exon | 6198225 | 6198620 | 6198225 | ID=MS.gene45552.t1.exon1;Parent=MS.gene45552.t1 |
| chr2.1 | CDS | 6198225 | 6198620 | 6198225 | ID=cds.MS.gene45552.t1;Parent=MS.gene45552.t1 |
| chr2.1 | exon | 6198761 | 6199132 | 6198761 | ID=MS.gene45552.t1.exon2;Parent=MS.gene45552.t1 |
| chr2.1 | CDS | 6198761 | 6199132 | 6198761 | ID=cds.MS.gene45552.t1;Parent=MS.gene45552.t1 |
| chr2.1 | exon | 6199903 | 6200199 | 6199903 | ID=MS.gene45552.t1.exon3;Parent=MS.gene45552.t1 |
| chr2.1 | CDS | 6199903 | 6200199 | 6199903 | ID=cds.MS.gene45552.t1;Parent=MS.gene45552.t1 |
| Gene Sequence |
| Protein sequence |
