Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49161.t1 | XP_003592185.2 | 97.8 | 271 | 6 | 0 | 1 | 271 | 126 | 396 | 7.30E-143 | 516.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49161.t1 | Q9FLY0 | 66.4 | 268 | 88 | 1 | 1 | 268 | 56 | 321 | 5.5e-99 | 362.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49161.t1 | B7FJU0 | 97.8 | 271 | 6 | 0 | 1 | 271 | 66 | 336 | 5.2e-143 | 516.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050228 | MS.gene49161 | 0.813904 | 2.02E-51 | -1.69E-46 |
| MS.gene050442 | MS.gene49161 | 0.806413 | 8.33E-50 | -1.69E-46 |
| MS.gene050680 | MS.gene49161 | 0.814347 | 1.61E-51 | -1.69E-46 |
| MS.gene050750 | MS.gene49161 | 0.862232 | 5.86E-64 | -1.69E-46 |
| MS.gene050820 | MS.gene49161 | 0.818654 | 1.75E-52 | -1.69E-46 |
| MS.gene050905 | MS.gene49161 | -0.80627 | 8.93E-50 | -1.69E-46 |
| MS.gene050953 | MS.gene49161 | 0.864743 | 9.76E-65 | -1.69E-46 |
| MS.gene051198 | MS.gene49161 | 0.807321 | 5.35E-50 | -1.69E-46 |
| MS.gene052056 | MS.gene49161 | -0.827596 | 1.43E-54 | -1.69E-46 |
| MS.gene052333 | MS.gene49161 | 0.805165 | 1.52E-49 | -1.69E-46 |
| MS.gene052519 | MS.gene49161 | 0.80876 | 2.64E-50 | -1.69E-46 |
| MS.gene052582 | MS.gene49161 | 0.80814 | 3.58E-50 | -1.69E-46 |
| MS.gene052584 | MS.gene49161 | 0.811869 | 5.64E-51 | -1.69E-46 |
| MS.gene052867 | MS.gene49161 | 0.814852 | 1.25E-51 | -1.69E-46 |
| MS.gene053054 | MS.gene49161 | -0.802164 | 6.39E-49 | -1.69E-46 |
| MS.gene053166 | MS.gene49161 | 0.811768 | 5.93E-51 | -1.69E-46 |
| MS.gene05415 | MS.gene49161 | 0.82596 | 3.53E-54 | -1.69E-46 |
| MS.gene054405 | MS.gene49161 | 0.859253 | 4.70E-63 | -1.69E-46 |
| MS.gene054559 | MS.gene49161 | 0.828789 | 7.39E-55 | -1.69E-46 |
| MS.gene05510 | MS.gene49161 | 0.817683 | 2.90E-52 | -1.69E-46 |
| MS.gene055818 | MS.gene49161 | 0.818086 | 2.35E-52 | -1.69E-46 |
| MS.gene056366 | MS.gene49161 | 0.817856 | 2.65E-52 | -1.69E-46 |
| MS.gene056506 | MS.gene49161 | 0.80913 | 2.20E-50 | -1.69E-46 |
| MS.gene057021 | MS.gene49161 | 0.812757 | 3.61E-51 | -1.69E-46 |
| MS.gene057060 | MS.gene49161 | 0.823167 | 1.60E-53 | -1.69E-46 |
| MS.gene057200 | MS.gene49161 | 0.810712 | 1.01E-50 | -1.69E-46 |
| MS.gene057414 | MS.gene49161 | 0.840016 | 1.12E-57 | -1.69E-46 |
| MS.gene057444 | MS.gene49161 | 0.815874 | 7.39E-52 | -1.69E-46 |
| MS.gene059128 | MS.gene49161 | 0.805873 | 1.08E-49 | -1.69E-46 |
| MS.gene05954 | MS.gene49161 | 0.83173 | 1.41E-55 | -1.69E-46 |
| MS.gene059569 | MS.gene49161 | 0.804089 | 2.55E-49 | -1.69E-46 |
| MS.gene05979 | MS.gene49161 | 0.811279 | 7.58E-51 | -1.69E-46 |
| MS.gene060137 | MS.gene49161 | -0.800693 | 1.28E-48 | -1.69E-46 |
| MS.gene060322 | MS.gene49161 | 0.818175 | 2.25E-52 | -1.69E-46 |
| MS.gene060429 | MS.gene49161 | 0.824578 | 7.48E-54 | -1.69E-46 |
| MS.gene060521 | MS.gene49161 | 0.805622 | 1.22E-49 | -1.69E-46 |
| MS.gene060572 | MS.gene49161 | 0.837073 | 6.44E-57 | -1.69E-46 |
| MS.gene060634 | MS.gene49161 | -0.830913 | 2.25E-55 | -1.69E-46 |
| MS.gene061040 | MS.gene49161 | -0.820068 | 8.34E-53 | -1.69E-46 |
| MS.gene061114 | MS.gene49161 | -0.820769 | 5.76E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49161.t1 | MTR_1g099620 | 97.786 | 271 | 6 | 0 | 1 | 271 | 66 | 336 | 0.0 | 544 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49161.t1 | AT5G52810 | 66.279 | 258 | 85 | 1 | 11 | 268 | 66 | 321 | 9.06e-128 | 366 |
Find 67 sgRNAs with CRISPR-Local
Find 92 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATAGAACCTCTTGTGTTTC+TGG | 0.038368 | 1.3:-68664077 | MS.gene49161:CDS |
| TTGGATGAGGTTGTTGGATT+TGG | 0.201511 | 1.3:-68663828 | MS.gene49161:CDS |
| TGGATGAGGTTGTTGGATTT+GGG | 0.215659 | 1.3:-68663827 | MS.gene49161:CDS |
| GTGATCAAGGAAGATGAAAT+TGG | 0.263380 | 1.3:-68663597 | MS.gene49161:CDS |
| CTCTCCTCCTCATGCCATCT+TGG | 0.286730 | 1.3:-68664259 | None:intergenic |
| TGGTCAAACCCTAGCTTCTA+TGG | 0.293021 | 1.3:-68664120 | MS.gene49161:CDS |
| GTTGAAGGTTGGAGCTCATT+TGG | 0.304474 | 1.3:-68663751 | MS.gene49161:CDS |
| AGTTGGGAGAAGCAGTTTAG+AGG | 0.305193 | 1.3:-68663541 | MS.gene49161:CDS |
| CTTATTAGAGGTGATAAAGT+TGG | 0.314713 | 1.3:-68663558 | MS.gene49161:CDS |
| AACCTCTTGTGTTTCTGGTT+TGG | 0.324737 | 1.3:-68664072 | MS.gene49161:CDS |
| GGATAGTGAGATTCTTGTTA+TGG | 0.338333 | 1.3:-68664027 | MS.gene49161:CDS |
| ATTCTTGTTATGGTTGGTGC+TGG | 0.339331 | 1.3:-68664017 | MS.gene49161:CDS |
| AAACACAAGAGGTTCTATAA+AGG | 0.342979 | 1.3:+68664081 | None:intergenic |
| TTCTTGTTATGGTTGGTGCT+GGG | 0.346295 | 1.3:-68664016 | MS.gene49161:CDS |
| TATGGTTGGTGCTGGGGCTC+TGG | 0.359468 | 1.3:-68664009 | MS.gene49161:CDS |
| GGTTGGAGCTCATTTGGATT+TGG | 0.375125 | 1.3:-68663745 | MS.gene49161:CDS |
| TTCTGCTGTTGTTGATATGC+TGG | 0.375347 | 1.3:-68663493 | MS.gene49161:CDS |
| AACTTGTTGGAGCTTATTAG+AGG | 0.376708 | 1.3:-68663570 | MS.gene49161:CDS |
| GGGAATTTGGATGAGGTTGT+TGG | 0.406725 | 1.3:-68663834 | MS.gene49161:CDS |
| TGATCAAGGAAGATGAAATT+GGG | 0.408514 | 1.3:-68663596 | MS.gene49161:CDS |
| AAAATGAGCTTTAATCAAAT+GGG | 0.414889 | 1.3:+68663983 | None:intergenic |
| TGTGAGCTGTGCTACTAATT+CGG | 0.423913 | 1.3:-68663799 | MS.gene49161:CDS |
| GTTGAAGCAGGGGAGCTTGT+GGG | 0.429786 | 1.3:-68663636 | MS.gene49161:CDS |
| TTATTAGAGGTGATAAAGTT+GGG | 0.439432 | 1.3:-68663557 | MS.gene49161:CDS |
| GGAGCTCATTTGGATTTGGT+TGG | 0.440193 | 1.3:-68663741 | MS.gene49161:CDS |
| AACACAAGAGGTTCTATAAA+GGG | 0.442179 | 1.3:+68664082 | None:intergenic |
| TTCATTTAAGCATTCAATGA+AGG | 0.446956 | 1.3:-68663718 | MS.gene49161:CDS |
| CAGAATTTACCAGGTGTTCA+AGG | 0.463641 | 1.3:-68664170 | MS.gene49161:CDS |
| AGCTAGGGTTTGACCAGTTG+TGG | 0.467549 | 1.3:+68664127 | None:intergenic |
| GGATGAGGTTGTTGGATTTG+GGG | 0.471029 | 1.3:-68663826 | MS.gene49161:CDS |
| GGGTTGTGGGAATTTGGATG+AGG | 0.472644 | 1.3:-68663841 | MS.gene49161:CDS |
| TGTTGACAATGAGGCTGCAT+TGG | 0.473667 | 1.3:-68663658 | MS.gene49161:CDS |
| CGGTTGAATCCATAGAAGCT+AGG | 0.474193 | 1.3:+68664111 | None:intergenic |
| TTGGAATAGGACAGTTGAAA+AGG | 0.474625 | 1.3:-68663928 | MS.gene49161:CDS |
| AGTTGAAAAGGCGAAAACTT+TGG | 0.477139 | 1.3:-68663916 | MS.gene49161:CDS |
| GGTTCTATAAAGGGTAAGTT+CGG | 0.487217 | 1.3:+68664091 | None:intergenic |
| GAGGCTGCATTGGTTGAAGC+AGG | 0.488309 | 1.3:-68663648 | MS.gene49161:CDS |
| ACACCTTCTTTCCCTTACAT+TGG | 0.488935 | 1.3:-68664230 | MS.gene49161:CDS |
| AGTGAGATTCTTGTTATGGT+TGG | 0.493863 | 1.3:-68664023 | MS.gene49161:CDS |
| TGATGATGAGGCTTTGAAAA+GGG | 0.498048 | 1.3:-68663691 | MS.gene49161:CDS |
| GGTTGAAGCAGGGGAGCTTG+TGG | 0.506759 | 1.3:-68663637 | MS.gene49161:CDS |
| ACACCAATGTAAGGGAAAGA+AGG | 0.509618 | 1.3:+68664227 | None:intergenic |
| TCTTGTTATGGTTGGTGCTG+GGG | 0.518068 | 1.3:-68664015 | MS.gene49161:CDS |
| GTGATGATGAGGCTTTGAAA+AGG | 0.530047 | 1.3:-68663692 | MS.gene49161:CDS |
| TTCGGAGACAGCGCTTGTGA+AGG | 0.531883 | 1.3:-68663781 | MS.gene49161:CDS |
| AACTCTTCACAGAATTTACC+AGG | 0.535091 | 1.3:-68664179 | MS.gene49161:CDS |
| AAGGGTGAGAGGTTGAAGGT+TGG | 0.535869 | 1.3:-68663762 | MS.gene49161:CDS |
| TCGGAGACAGCGCTTGTGAA+GGG | 0.542077 | 1.3:-68663780 | MS.gene49161:CDS |
| TTCTAAATATTTAGCTAGAG+AGG | 0.543209 | 1.3:-68664048 | MS.gene49161:CDS |
| GGTTGAATCCATAGAAGCTA+GGG | 0.552130 | 1.3:+68664112 | None:intergenic |
| TGTGAAGGGTGAGAGGTTGA+AGG | 0.554444 | 1.3:-68663766 | MS.gene49161:CDS |
| GGCTGCATTGGTTGAAGCAG+GGG | 0.573870 | 1.3:-68663646 | MS.gene49161:CDS |
| CAGCGCTTGTGAAGGGTGAG+AGG | 0.592375 | 1.3:-68663773 | MS.gene49161:CDS |
| AGGCTGCATTGGTTGAAGCA+GGG | 0.600932 | 1.3:-68663647 | MS.gene49161:CDS |
| ACATAGCTACCTTGAACACC+TGG | 0.601923 | 1.3:+68664161 | None:intergenic |
| TGAGACATACACAAGGACAT+AGG | 0.603141 | 1.3:-68663454 | None:intergenic |
| GATCAAGGAAGATGAAATTG+GGG | 0.606167 | 1.3:-68663595 | MS.gene49161:CDS |
| ATGATGAGGCTTTGAAAAGG+GGG | 0.615537 | 1.3:-68663689 | MS.gene49161:CDS |
| GATGATGAGGCTTTGAAAAG+GGG | 0.633023 | 1.3:-68663690 | MS.gene49161:CDS |
| AAATGAGCTTTAATCAAATG+GGG | 0.636157 | 1.3:+68663984 | None:intergenic |
| GAAGGTGTGGAAGACCAAGA+TGG | 0.646483 | 1.3:+68664245 | None:intergenic |
| AATGTAAGGGAAAGAAGGTG+TGG | 0.648374 | 1.3:+68664232 | None:intergenic |
| AATGAAGGAATGTGATGATG+AGG | 0.651034 | 1.3:-68663703 | MS.gene49161:CDS |
| AGCCAAACCAGAAACACAAG+AGG | 0.653819 | 1.3:+68664070 | None:intergenic |
| ATCAAGGAAGATGAAATTGG+GGG | 0.695243 | 1.3:-68663594 | MS.gene49161:CDS |
| TCAAGGAAGATGAAATTGGG+GGG | 0.718689 | 1.3:-68663593 | MS.gene49161:CDS |
| TTGTTTATGAGACATACACA+AGG | 0.727977 | 1.3:-68663461 | MS.gene49161:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAGTATTAATTTGGAAT+AGG | - | chr1.3:68663762-68663781 | MS.gene49161:CDS | 15.0% |
| !!! | AATTAATACTTTTTTCAAAC+TGG | + | chr1.3:68663756-68663775 | None:intergenic | 15.0% |
| !!! | ATTAATACTTTTTTCAAACT+GGG | + | chr1.3:68663755-68663774 | None:intergenic | 15.0% |
| !!! | GTTTGAAAAAAGTATTAATT+TGG | - | chr1.3:68663756-68663775 | MS.gene49161:CDS | 15.0% |
| !!! | AAAAATGAGCTTTAATCAAA+TGG | + | chr1.3:68663724-68663743 | None:intergenic | 20.0% |
| !!! | AAAATGAGCTTTAATCAAAT+GGG | + | chr1.3:68663723-68663742 | None:intergenic | 20.0% |
| ! | TTATTAGAGGTGATAAAGTT+GGG | - | chr1.3:68664146-68664165 | MS.gene49161:CDS | 25.0% |
| ! | TTCATTTAAGCATTCAATGA+AGG | - | chr1.3:68663985-68664004 | MS.gene49161:CDS | 25.0% |
| ! | TTCTAAATATTTAGCTAGAG+AGG | - | chr1.3:68663655-68663674 | MS.gene49161:CDS | 25.0% |
| !! | AAATGAGCTTTAATCAAATG+GGG | + | chr1.3:68663722-68663741 | None:intergenic | 25.0% |
| AAACACAAGAGGTTCTATAA+AGG | + | chr1.3:68663625-68663644 | None:intergenic | 30.0% | |
| AACACAAGAGGTTCTATAAA+GGG | + | chr1.3:68663624-68663643 | None:intergenic | 30.0% | |
| CTTATTAGAGGTGATAAAGT+TGG | - | chr1.3:68664145-68664164 | MS.gene49161:CDS | 30.0% | |
| TGATCAAGGAAGATGAAATT+GGG | - | chr1.3:68664107-68664126 | MS.gene49161:CDS | 30.0% | |
| TTGTTTATGAGACATACACA+AGG | - | chr1.3:68664242-68664261 | MS.gene49161:CDS | 30.0% | |
| ! | AAATTCTGTGAAGAGTTTTC+AGG | + | chr1.3:68663521-68663540 | None:intergenic | 30.0% |
| ! | AATTCTGTGAAGAGTTTTCA+GGG | + | chr1.3:68663520-68663539 | None:intergenic | 30.0% |
| ! | GAAAGTTTTTGTTGACAATG+AGG | - | chr1.3:68664036-68664055 | MS.gene49161:CDS | 30.0% |
| !! | TTAAAGCTCATTTTTCAGCT+AGG | - | chr1.3:68663729-68663748 | MS.gene49161:CDS | 30.0% |
| !!! | ATTACTGTTTTCAAGTCTGT+TGG | - | chr1.3:68664187-68664206 | MS.gene49161:CDS | 30.0% |
| AACTCTTCACAGAATTTACC+AGG | - | chr1.3:68663524-68663543 | MS.gene49161:CDS | 35.0% | |
| AGTTGAAAAGGCGAAAACTT+TGG | - | chr1.3:68663787-68663806 | MS.gene49161:CDS | 35.0% | |
| ATCAAGGAAGATGAAATTGG+GGG | - | chr1.3:68664109-68664128 | MS.gene49161:CDS | 35.0% | |
| GATCAAGGAAGATGAAATTG+GGG | - | chr1.3:68664108-68664127 | MS.gene49161:CDS | 35.0% | |
| GGATAGTGAGATTCTTGTTA+TGG | - | chr1.3:68663676-68663695 | MS.gene49161:CDS | 35.0% | |
| GGTTCTATAAAGGGTAAGTT+CGG | + | chr1.3:68663615-68663634 | None:intergenic | 35.0% | |
| GTGATCAAGGAAGATGAAAT+TGG | - | chr1.3:68664106-68664125 | MS.gene49161:CDS | 35.0% | |
| TATAGAACCTCTTGTGTTTC+TGG | - | chr1.3:68663626-68663645 | MS.gene49161:CDS | 35.0% | |
| TTGGAATAGGACAGTTGAAA+AGG | - | chr1.3:68663775-68663794 | MS.gene49161:CDS | 35.0% | |
| ! | AATGAAGGAATGTGATGATG+AGG | - | chr1.3:68664000-68664019 | MS.gene49161:CDS | 35.0% |
| ! | ACGAGTTTTACACCAATGTA+AGG | + | chr1.3:68663488-68663507 | None:intergenic | 35.0% |
| ! | AGCGATGAATTTTTGCTTTC+AGG | - | chr1.3:68663827-68663846 | MS.gene49161:CDS | 35.0% |
| ! | AGTGAGATTCTTGTTATGGT+TGG | - | chr1.3:68663680-68663699 | MS.gene49161:CDS | 35.0% |
| ! | CGAGTTTTACACCAATGTAA+GGG | + | chr1.3:68663487-68663506 | None:intergenic | 35.0% |
| ! | GCGATGAATTTTTGCTTTCA+GGG | - | chr1.3:68663828-68663847 | MS.gene49161:CDS | 35.0% |
| ! | GTTCTTTTCAATTCCACAAC+TGG | - | chr1.3:68663563-68663582 | MS.gene49161:CDS | 35.0% |
| !! | AACTTGTTGGAGCTTATTAG+AGG | - | chr1.3:68664133-68664152 | MS.gene49161:CDS | 35.0% |
| !! | TGAAGAGTTTTCAGGGAAAT+GGG | + | chr1.3:68663513-68663532 | None:intergenic | 35.0% |
| !! | TGATGATGAGGCTTTGAAAA+GGG | - | chr1.3:68664012-68664031 | MS.gene49161:CDS | 35.0% |
| AATGTAAGGGAAAGAAGGTG+TGG | + | chr1.3:68663474-68663493 | None:intergenic | 40.0% | |
| ACACCAATGTAAGGGAAAGA+AGG | + | chr1.3:68663479-68663498 | None:intergenic | 40.0% | |
| ACACCTTCTTTCCCTTACAT+TGG | - | chr1.3:68663473-68663492 | MS.gene49161:CDS | 40.0% | |
| CAGAATTTACCAGGTGTTCA+AGG | - | chr1.3:68663533-68663552 | MS.gene49161:CDS | 40.0% | |
| GGTTGAATCCATAGAAGCTA+GGG | + | chr1.3:68663594-68663613 | None:intergenic | 40.0% | |
| TCAAGGAAGATGAAATTGGG+GGG | - | chr1.3:68664110-68664129 | MS.gene49161:CDS | 40.0% | |
| TGGATGAGGTTGTTGGATTT+GGG | - | chr1.3:68663876-68663895 | MS.gene49161:CDS | 40.0% | |
| TTCTGCTGTTGTTGATATGC+TGG | - | chr1.3:68664210-68664229 | MS.gene49161:CDS | 40.0% | |
| TTGGATGAGGTTGTTGGATT+TGG | - | chr1.3:68663875-68663894 | MS.gene49161:CDS | 40.0% | |
| ! | ATTCTTGTTATGGTTGGTGC+TGG | - | chr1.3:68663686-68663705 | MS.gene49161:CDS | 40.0% |
| ! | TGTGAGCTGTGCTACTAATT+CGG | - | chr1.3:68663904-68663923 | MS.gene49161:CDS | 40.0% |
| ! | TTCTTGTTATGGTTGGTGCT+GGG | - | chr1.3:68663687-68663706 | MS.gene49161:CDS | 40.0% |
| !! | AACCTCTTGTGTTTCTGGTT+TGG | - | chr1.3:68663631-68663650 | MS.gene49161:CDS | 40.0% |
| !! | ATGATGAGGCTTTGAAAAGG+GGG | - | chr1.3:68664014-68664033 | MS.gene49161:CDS | 40.0% |
| !! | CTTTCAGGGTTGAGTTTTGA+GGG | - | chr1.3:68663842-68663861 | MS.gene49161:CDS | 40.0% |
| !! | GATGATGAGGCTTTGAAAAG+GGG | - | chr1.3:68664013-68664032 | MS.gene49161:CDS | 40.0% |
| !! | GTGAAGAGTTTTCAGGGAAA+TGG | + | chr1.3:68663514-68663533 | None:intergenic | 40.0% |
| !! | GTGATGATGAGGCTTTGAAA+AGG | - | chr1.3:68664011-68664030 | MS.gene49161:CDS | 40.0% |
| !! | TTTTGAAAGGGGTGTGATCA+AGG | - | chr1.3:68664093-68664112 | MS.gene49161:CDS | 40.0% |
| !! | TTTTGAGGGTTGTGGGAATT+TGG | - | chr1.3:68663856-68663875 | MS.gene49161:CDS | 40.0% |
| ACATAGCTACCTTGAACACC+TGG | + | chr1.3:68663545-68663564 | None:intergenic | 45.0% | |
| AGCCAAACCAGAAACACAAG+AGG | + | chr1.3:68663636-68663655 | None:intergenic | 45.0% | |
| AGTTGGGAGAAGCAGTTTAG+AGG | - | chr1.3:68664162-68664181 | MS.gene49161:CDS | 45.0% | |
| CGGTTGAATCCATAGAAGCT+AGG | + | chr1.3:68663595-68663614 | None:intergenic | 45.0% | |
| GGATGAGGTTGTTGGATTTG+GGG | - | chr1.3:68663877-68663896 | MS.gene49161:CDS | 45.0% | |
| GGGAATTTGGATGAGGTTGT+TGG | - | chr1.3:68663869-68663888 | MS.gene49161:CDS | 45.0% | |
| GGTTGGAGCTCATTTGGATT+TGG | - | chr1.3:68663958-68663977 | MS.gene49161:CDS | 45.0% | |
| GTTGAAGGTTGGAGCTCATT+TGG | - | chr1.3:68663952-68663971 | MS.gene49161:CDS | 45.0% | |
| TGAAATTGGGGGGAACTTGT+TGG | - | chr1.3:68664120-68664139 | MS.gene49161:CDS | 45.0% | |
| TGGTCAAACCCTAGCTTCTA+TGG | - | chr1.3:68663583-68663602 | MS.gene49161:CDS | 45.0% | |
| TGTTGACAATGAGGCTGCAT+TGG | - | chr1.3:68664045-68664064 | MS.gene49161:CDS | 45.0% | |
| ! | AGCTTGTGGGTGCTTTTGAA+AGG | - | chr1.3:68664080-68664099 | MS.gene49161:CDS | 45.0% |
| ! | GCTTTCAGGGTTGAGTTTTG+AGG | - | chr1.3:68663841-68663860 | MS.gene49161:CDS | 45.0% |
| ! | GGAGCTCATTTGGATTTGGT+TGG | - | chr1.3:68663962-68663981 | MS.gene49161:CDS | 45.0% |
| !! | CTTGTGGGTGCTTTTGAAAG+GGG | - | chr1.3:68664082-68664101 | MS.gene49161:CDS | 45.0% |
| !! | GCTTGTGGGTGCTTTTGAAA+GGG | - | chr1.3:68664081-68664100 | MS.gene49161:CDS | 45.0% |
| !! | TCTTGTTATGGTTGGTGCTG+GGG | - | chr1.3:68663688-68663707 | MS.gene49161:CDS | 45.0% |
| !!! | GGTTGAGTTTTGAGGGTTGT+GGG | - | chr1.3:68663849-68663868 | MS.gene49161:CDS | 45.0% |
| AAGGGTGAGAGGTTGAAGGT+TGG | - | chr1.3:68663941-68663960 | MS.gene49161:CDS | 50.0% | |
| AGCTAGGGTTTGACCAGTTG+TGG | + | chr1.3:68663579-68663598 | None:intergenic | 50.0% | |
| GGGTTGTGGGAATTTGGATG+AGG | - | chr1.3:68663862-68663881 | MS.gene49161:CDS | 50.0% | |
| TGTGAAGGGTGAGAGGTTGA+AGG | - | chr1.3:68663937-68663956 | MS.gene49161:CDS | 50.0% | |
| ! | GAAGGTGTGGAAGACCAAGA+TGG | + | chr1.3:68663461-68663480 | None:intergenic | 50.0% |
| !! | AGGCTGCATTGGTTGAAGCA+GGG | - | chr1.3:68664056-68664075 | MS.gene49161:CDS | 50.0% |
| !!! | GGGTTGAGTTTTGAGGGTTG+TGG | - | chr1.3:68663848-68663867 | MS.gene49161:CDS | 50.0% |
| GTTGAAGCAGGGGAGCTTGT+GGG | - | chr1.3:68664067-68664086 | MS.gene49161:CDS | 55.0% | |
| TCGGAGACAGCGCTTGTGAA+GGG | - | chr1.3:68663923-68663942 | MS.gene49161:CDS | 55.0% | |
| TTCGGAGACAGCGCTTGTGA+AGG | - | chr1.3:68663922-68663941 | MS.gene49161:CDS | 55.0% | |
| !! | GAGGCTGCATTGGTTGAAGC+AGG | - | chr1.3:68664055-68664074 | MS.gene49161:CDS | 55.0% |
| !! | GGCTGCATTGGTTGAAGCAG+GGG | - | chr1.3:68664057-68664076 | MS.gene49161:CDS | 55.0% |
| CAGCGCTTGTGAAGGGTGAG+AGG | - | chr1.3:68663930-68663949 | MS.gene49161:CDS | 60.0% | |
| GGTTGAAGCAGGGGAGCTTG+TGG | - | chr1.3:68664066-68664085 | MS.gene49161:CDS | 60.0% | |
| !! | TATGGTTGGTGCTGGGGCTC+TGG | - | chr1.3:68663694-68663713 | MS.gene49161:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 68663455 | 68664270 | 68663455 | ID=MS.gene49161 |
| chr1.3 | mRNA | 68663455 | 68664270 | 68663455 | ID=MS.gene49161.t1;Parent=MS.gene49161 |
| chr1.3 | exon | 68663455 | 68664270 | 68663455 | ID=MS.gene49161.t1.exon1;Parent=MS.gene49161.t1 |
| chr1.3 | CDS | 68663455 | 68664270 | 68663455 | ID=cds.MS.gene49161.t1;Parent=MS.gene49161.t1 |
| Gene Sequence |
| Protein sequence |
