Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49179.t1 | RHN81727.1 | 97.6 | 579 | 11 | 1 | 1 | 579 | 1 | 576 | 0.00E+00 | 1110.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49179.t1 | Q9FLW9 | 79.1 | 579 | 117 | 1 | 1 | 575 | 1 | 579 | 2.4e-261 | 902.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49179.t1 | A0A396K762 | 97.6 | 579 | 11 | 1 | 1 | 579 | 1 | 576 | 0.0e+00 | 1110.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene49179 | MS.gene20039 | PPI |
| MS.gene49179 | MS.gene065645 | PPI |
| MS.gene49179 | MS.gene059683 | PPI |
| MS.gene49179 | MS.gene034948 | PPI |
| MS.gene49179 | MS.gene007327 | PPI |
| MS.gene49179 | MS.gene82768 | PPI |
| MS.gene49179 | MS.gene09667 | PPI |
| MS.gene49179 | MS.gene56459 | PPI |
| MS.gene49179 | MS.gene82398 | PPI |
| MS.gene49179 | MS.gene09810 | PPI |
| MS.gene49179 | MS.gene85589 | PPI |
| MS.gene49179 | MS.gene007617 | PPI |
| MS.gene49179 | MS.gene006868 | PPI |
| MS.gene49179 | MS.gene062243 | PPI |
| MS.gene49179 | MS.gene56458 | PPI |
| MS.gene49179 | MS.gene015322 | PPI |
| MS.gene49179 | MS.gene82397 | PPI |
| MS.gene49179 | MS.gene053108 | PPI |
| MS.gene49179 | MS.gene065294 | PPI |
| MS.gene49179 | MS.gene006867 | PPI |
| MS.gene49179 | MS.gene020572 | PPI |
| MS.gene49179 | MS.gene032695 | PPI |
| MS.gene49179 | MS.gene004893 | PPI |
| MS.gene49179 | MS.gene22462 | PPI |
| MS.gene49179 | MS.gene007459 | PPI |
| MS.gene49179 | MS.gene21480 | PPI |
| MS.gene49179 | MS.gene47368 | PPI |
| MS.gene49179 | MS.gene07416 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49179.t1 | MTR_1g099360 | 97.409 | 579 | 12 | 1 | 1 | 579 | 1 | 576 | 0.0 | 1170 |
| MS.gene49179.t1 | MTR_6g034195 | 84.749 | 577 | 83 | 3 | 1 | 575 | 1 | 574 | 0.0 | 1007 |
| MS.gene49179.t1 | MTR_5g014140 | 74.735 | 471 | 119 | 0 | 105 | 575 | 76 | 546 | 0.0 | 740 |
| MS.gene49179.t1 | MTR_5g014140 | 81.962 | 316 | 57 | 0 | 105 | 420 | 76 | 391 | 0.0 | 543 |
| MS.gene49179.t1 | MTR_1g076540 | 45.912 | 477 | 236 | 7 | 106 | 561 | 89 | 564 | 4.43e-128 | 387 |
| MS.gene49179.t1 | MTR_1g105965 | 41.273 | 487 | 267 | 9 | 106 | 575 | 90 | 574 | 1.52e-114 | 352 |
| MS.gene49179.t1 | MTR_6g004020 | 37.083 | 480 | 259 | 12 | 107 | 551 | 21 | 492 | 8.56e-86 | 276 |
| MS.gene49179.t1 | MTR_4g083340 | 36.458 | 480 | 262 | 11 | 107 | 551 | 8 | 479 | 1.46e-85 | 275 |
| MS.gene49179.t1 | MTR_7g100760 | 35.197 | 483 | 264 | 12 | 107 | 551 | 11 | 482 | 4.19e-82 | 266 |
| MS.gene49179.t1 | MTR_1g105965 | 45.066 | 304 | 156 | 5 | 106 | 399 | 90 | 392 | 7.29e-80 | 257 |
| MS.gene49179.t1 | MTR_4g083330 | 33.264 | 484 | 253 | 12 | 107 | 555 | 11 | 459 | 6.16e-73 | 241 |
| MS.gene49179.t1 | MTR_1g091040 | 27.572 | 486 | 310 | 15 | 108 | 555 | 30 | 511 | 9.69e-44 | 164 |
| MS.gene49179.t1 | MTR_1g105965 | 39.906 | 213 | 118 | 4 | 106 | 309 | 90 | 301 | 2.60e-43 | 157 |
| MS.gene49179.t1 | MTR_7g103420 | 26.749 | 486 | 315 | 13 | 108 | 555 | 30 | 512 | 3.93e-43 | 162 |
| MS.gene49179.t1 | MTR_7g103420 | 26.600 | 500 | 313 | 13 | 108 | 555 | 30 | 527 | 1.76e-42 | 160 |
| MS.gene49179.t1 | MTR_1g061630 | 28.224 | 411 | 262 | 11 | 108 | 494 | 30 | 431 | 6.68e-41 | 155 |
| MS.gene49179.t1 | MTR_1g061630 | 28.362 | 409 | 248 | 11 | 108 | 494 | 30 | 415 | 9.94e-41 | 155 |
| MS.gene49179.t1 | MTR_7g103420 | 25.647 | 425 | 276 | 12 | 169 | 555 | 1 | 423 | 2.16e-31 | 127 |
| MS.gene49179.t1 | MTR_1g091040 | 28.011 | 357 | 226 | 11 | 227 | 555 | 25 | 378 | 1.08e-28 | 118 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49179.t1 | AT5G52920 | 79.102 | 579 | 117 | 1 | 1 | 575 | 1 | 579 | 0.0 | 952 |
| MS.gene49179.t1 | AT1G32440 | 77.070 | 471 | 107 | 1 | 105 | 575 | 98 | 567 | 0.0 | 762 |
| MS.gene49179.t1 | AT3G22960 | 47.158 | 475 | 231 | 7 | 106 | 561 | 117 | 590 | 7.27e-131 | 395 |
| MS.gene49179.t1 | AT3G55650 | 34.765 | 489 | 284 | 9 | 96 | 551 | 6 | 492 | 1.70e-86 | 278 |
| MS.gene49179.t1 | AT3G25960 | 35.565 | 478 | 282 | 9 | 96 | 551 | 6 | 479 | 5.16e-86 | 276 |
| MS.gene49179.t1 | AT5G56350 | 35.341 | 498 | 274 | 14 | 105 | 564 | 7 | 494 | 5.08e-84 | 271 |
| MS.gene49179.t1 | AT5G63680 | 37.342 | 474 | 266 | 11 | 107 | 551 | 21 | 492 | 8.03e-84 | 271 |
| MS.gene49179.t1 | AT5G63680 | 37.342 | 474 | 266 | 11 | 107 | 551 | 21 | 492 | 8.03e-84 | 271 |
| MS.gene49179.t1 | AT5G63680 | 37.342 | 474 | 266 | 11 | 107 | 551 | 21 | 492 | 8.03e-84 | 271 |
| MS.gene49179.t1 | AT3G04050 | 34.511 | 481 | 280 | 10 | 104 | 551 | 14 | 492 | 1.41e-83 | 270 |
| MS.gene49179.t1 | AT4G26390 | 35.404 | 483 | 280 | 10 | 105 | 557 | 6 | 486 | 5.09e-83 | 268 |
| MS.gene49179.t1 | AT5G08570 | 36.842 | 475 | 267 | 12 | 107 | 551 | 21 | 492 | 6.33e-83 | 268 |
| MS.gene49179.t1 | AT5G08570 | 36.842 | 475 | 267 | 12 | 107 | 551 | 21 | 492 | 6.33e-83 | 268 |
| MS.gene49179.t1 | AT5G08570 | 36.842 | 475 | 267 | 12 | 107 | 551 | 21 | 492 | 6.33e-83 | 268 |
| MS.gene49179.t1 | AT3G55810 | 32.515 | 489 | 277 | 10 | 96 | 551 | 6 | 474 | 3.85e-72 | 239 |
| MS.gene49179.t1 | AT2G36580 | 28.279 | 488 | 305 | 14 | 108 | 555 | 30 | 512 | 9.26e-47 | 172 |
| MS.gene49179.t1 | AT3G52990 | 27.869 | 488 | 307 | 14 | 108 | 555 | 30 | 512 | 7.51e-45 | 167 |
| MS.gene49179.t1 | AT3G52990 | 27.155 | 464 | 293 | 14 | 132 | 555 | 1 | 459 | 7.77e-39 | 149 |
| MS.gene49179.t1 | AT3G49160 | 29.258 | 229 | 144 | 6 | 215 | 432 | 473 | 694 | 7.78e-19 | 90.9 |
| MS.gene49179.t1 | AT3G49160 | 29.258 | 229 | 144 | 6 | 215 | 432 | 385 | 606 | 9.04e-19 | 90.5 |
Find 152 sgRNAs with CRISPR-Local
Find 316 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAACAAGTTGGTAATGTTTC+TGG | 0.172900 | 1.3:-68455318 | MS.gene49179:CDS |
| TCCGATGGAATAATGCTTTC+TGG | 0.190585 | 1.3:-68453165 | MS.gene49179:CDS |
| GATTGGGATGACATCAAATT+TGG | 0.216798 | 1.3:-68453957 | MS.gene49179:CDS |
| AGACTTAGGTGGGAAGATTT+TGG | 0.242810 | 1.3:+68455617 | None:intergenic |
| ACTAAGATTGTTTGTACTAT+TGG | 0.260506 | 1.3:-68455261 | MS.gene49179:CDS |
| CTGATCAGTAAAAGCAAATA+TGG | 0.278721 | 1.3:+68452368 | None:intergenic |
| TTGAATACTTGGCCAATATT+AGG | 0.283361 | 1.3:+68452657 | None:intergenic |
| ATTACTTTCGCAGCTTTAAT+TGG | 0.294022 | 1.3:+68452732 | None:intergenic |
| TCAGAGAATTCCATGTAAAT+AGG | 0.315231 | 1.3:+68451923 | None:intergenic |
| CCATTCCACTCACAATATTC+AGG | 0.322453 | 1.3:-68451397 | MS.gene49179:CDS |
| ATCGATAACTTCGCATTTCA+CGG | 0.329487 | 1.3:+68454207 | None:intergenic |
| TCATAAGAAAGTTATTGATT+TGG | 0.344192 | 1.3:-68455145 | MS.gene49179:CDS |
| ATTTCCTTTGTATTAGTAGA+AGG | 0.347373 | 1.3:+68455237 | None:intergenic |
| AAAAGCCTTGGATTTGTTGC+AGG | 0.348377 | 1.3:-68451879 | MS.gene49179:intron |
| CTAATACAAAGGAAATGATT+TGG | 0.354416 | 1.3:-68455230 | MS.gene49179:CDS |
| TGAGGACTTTCTTGCATTGA+TGG | 0.364054 | 1.3:+68455560 | None:intergenic |
| GAAAGTTATTGATTTGGTTA+AGG | 0.365961 | 1.3:-68455139 | MS.gene49179:CDS |
| CAATGCAGGAAGAGATAATA+AGG | 0.366508 | 1.3:-68453308 | MS.gene49179:intron |
| GAATCATCTTCGGGTGATAC+AGG | 0.367392 | 1.3:+68455522 | None:intergenic |
| TGGTGCCTGCAGGTCGATAA+TGG | 0.377025 | 1.3:+68452388 | None:intergenic |
| CTTCACTAGATCGGGTTTCA+TGG | 0.377434 | 1.3:-68452424 | MS.gene49179:CDS |
| AAAAGCGGAACCTCCTCAAT+AGG | 0.380743 | 1.3:+68453448 | None:intergenic |
| CGGAGACATTTGAATGTTAG+AGG | 0.383246 | 1.3:-68454166 | MS.gene49179:CDS |
| GGATAGTAAAAGTGAATTCC+TGG | 0.383564 | 1.3:+68454899 | None:intergenic |
| CATACTTTCCAGCATATTTG+TGG | 0.385316 | 1.3:+68453251 | None:intergenic |
| TCCCTCTTACGACCCACTTC+AGG | 0.386910 | 1.3:-68455690 | MS.gene49179:CDS |
| ACAAACCTTTGAATCATCTT+CGG | 0.386930 | 1.3:+68455512 | None:intergenic |
| CTATGCCGTTTCTTTCGTTA+AGG | 0.387859 | 1.3:-68453913 | MS.gene49179:CDS |
| GAGGTTGTGAAGCAAAGCTT+GGG | 0.393905 | 1.3:+68455585 | None:intergenic |
| TGAATAGATTGAGGCGGAGT+TGG | 0.395795 | 1.3:-68455358 | MS.gene49179:intron |
| ACCTCTGCTCTGGTTGGCGT+GGG | 0.401155 | 1.3:+68453219 | None:intergenic |
| ATTTGGAAACTTGCTGAGGC+TGG | 0.403880 | 1.3:-68455213 | MS.gene49179:CDS |
| AACTGTTGTCTTCACTAGAT+CGG | 0.404661 | 1.3:-68452433 | MS.gene49179:CDS |
| ACTGTTGTCTTCACTAGATC+GGG | 0.416610 | 1.3:-68452432 | MS.gene49179:CDS |
| CAAACCTTTGAATCATCTTC+GGG | 0.417561 | 1.3:+68455513 | None:intergenic |
| GGGCAGATGCCACCTAATAT+TGG | 0.424869 | 1.3:-68452669 | MS.gene49179:CDS |
| AAAGTGGAAGGCAACCTATA+TGG | 0.425350 | 1.3:-68451425 | MS.gene49179:CDS |
| CAGAGGTTGGCTTTGTATCA+AGG | 0.426338 | 1.3:-68451953 | MS.gene49179:CDS |
| TTTCACGGAATCCGCTGTCT+TGG | 0.428216 | 1.3:+68454222 | None:intergenic |
| AAGTTTAGACCTTGAATACT+TGG | 0.428867 | 1.3:+68452646 | None:intergenic |
| ATTTGTTGCAGAAAAGGATT+GGG | 0.432529 | 1.3:-68453973 | MS.gene49179:intron |
| TTAGTCTTTCTTCTAACCAT+TGG | 0.438719 | 1.3:+68455279 | None:intergenic |
| ATGTCTCAGGTTGCAACCAC+TGG | 0.442324 | 1.3:-68455726 | MS.gene49179:CDS |
| GGAGGTTGTGAAGCAAAGCT+TGG | 0.445500 | 1.3:+68455584 | None:intergenic |
| AATTTGTTGCAGAAAAGGAT+TGG | 0.453541 | 1.3:-68453974 | MS.gene49179:intron |
| GTTGCCTTCCACTTTGTACA+AGG | 0.457075 | 1.3:+68451433 | None:intergenic |
| TCAATTATTACTGCATCTGA+TGG | 0.461675 | 1.3:-68453679 | MS.gene49179:CDS |
| TCTCTCTACTACAATGTCTC+AGG | 0.466077 | 1.3:-68455739 | None:intergenic |
| AATTTGTGGCGGCTACTGTT+CGG | 0.466689 | 1.3:+68451373 | None:intergenic |
| TAATATTGGCCAAGTATTCA+AGG | 0.466771 | 1.3:-68452655 | MS.gene49179:intron |
| AGGTGGTATGATGTCCTTCT+TGG | 0.469108 | 1.3:-68454251 | MS.gene49179:CDS |
| GTAATAATTGAATGCAAGTT+CGG | 0.469193 | 1.3:+68453691 | None:intergenic |
| CATATTTGTGGCTACAATAA+CGG | 0.474034 | 1.3:+68453263 | None:intergenic |
| ATGGTTGCAAGAGGAGATCT+TGG | 0.484762 | 1.3:-68453481 | MS.gene49179:CDS |
| TAATGCACACCGTAGCATTA+CGG | 0.486804 | 1.3:-68452713 | MS.gene49179:CDS |
| GGGGACATGCTTCTTGTTGA+CGG | 0.487278 | 1.3:-68454808 | MS.gene49179:intron |
| TCCAAGGGTATTAGACATCA+TGG | 0.487729 | 1.3:+68452461 | None:intergenic |
| AGAGACATTCACAAAAGCCT+TGG | 0.488109 | 1.3:-68451891 | MS.gene49179:CDS |
| TCGTAAGAGGGAGGTTTGAA+TGG | 0.491999 | 1.3:+68455701 | None:intergenic |
| TTTGTCAATGATGTTGAAGA+AGG | 0.492314 | 1.3:-68454829 | MS.gene49179:CDS |
| AAAGTCTAACCAGTGATTGA+AGG | 0.493534 | 1.3:+68454127 | None:intergenic |
| CAATTATTACTGCATCTGAT+GGG | 0.495858 | 1.3:-68453678 | MS.gene49179:CDS |
| TACCTCTGCTCTGGTTGGCG+TGG | 0.497055 | 1.3:+68453218 | None:intergenic |
| AAAGCGGAACCTCCTCAATA+GGG | 0.498685 | 1.3:+68453449 | None:intergenic |
| GAGGACTTTCTTGCATTGAT+GGG | 0.499803 | 1.3:+68455561 | None:intergenic |
| TCCAGAAAGCATTATTCCAT+CGG | 0.500745 | 1.3:+68453164 | None:intergenic |
| TATTGTAGCCACAAATATGC+TGG | 0.504931 | 1.3:-68453259 | MS.gene49179:CDS |
| GGGTCCTGAGGTTAGGAGTG+GGG | 0.506757 | 1.3:-68454953 | MS.gene49179:CDS |
| AGGTTGTGAAGCAAAGCTTG+GGG | 0.508286 | 1.3:+68455586 | None:intergenic |
| TCGGGCTGAAACTTAATTTG+TGG | 0.510728 | 1.3:+68451359 | None:intergenic |
| ACCATGATGTCTAATACCCT+TGG | 0.514111 | 1.3:-68452462 | MS.gene49179:CDS |
| TTTACTATCCAGAGTGGCGT+TGG | 0.515163 | 1.3:-68454886 | MS.gene49179:CDS |
| ATCCTGAAGTGGGTCGTAAG+AGG | 0.515645 | 1.3:+68455688 | None:intergenic |
| GCAACACTGCCTTCAATCAC+TGG | 0.520688 | 1.3:-68454136 | MS.gene49179:intron |
| CAGCAGTTCCAACGCCACTC+TGG | 0.522112 | 1.3:+68454878 | None:intergenic |
| TTGGTGGCCATGCAGGAAAA+GGG | 0.523975 | 1.3:-68451981 | MS.gene49179:intron |
| TGCAATTATGCTTGACACCA+AGG | 0.524078 | 1.3:-68455085 | MS.gene49179:intron |
| TCCTGAAGTGGGTCGTAAGA+GGG | 0.525049 | 1.3:+68455689 | None:intergenic |
| AATATCAGATACCTCTGCTC+TGG | 0.526914 | 1.3:+68453209 | None:intergenic |
| GGGGATTGTTAGACTTAGGT+GGG | 0.527984 | 1.3:+68455607 | None:intergenic |
| GTGGAATGGAACCTCCATAT+AGG | 0.530502 | 1.3:+68451411 | None:intergenic |
| TGCATCCTTAACGAAAGAAA+CGG | 0.532070 | 1.3:+68453908 | None:intergenic |
| GAAGTAGCCCTTGTACAAAG+TGG | 0.532110 | 1.3:-68451441 | MS.gene49179:CDS |
| TTGTCAATGATGTTGAAGAA+GGG | 0.535922 | 1.3:-68454828 | MS.gene49179:CDS |
| AGGGTCCTGAGGTTAGGAGT+GGG | 0.537150 | 1.3:-68454954 | MS.gene49179:CDS |
| TTGAGCCATTATCGACCTGC+AGG | 0.540869 | 1.3:-68452393 | MS.gene49179:CDS |
| AATAAGGATATGCCGTAGCA+TGG | 0.541078 | 1.3:-68453292 | MS.gene49179:CDS |
| AAAGCAAATATGGTGCCTGC+AGG | 0.543058 | 1.3:+68452378 | None:intergenic |
| AGGCGTCTGTCCTATTTACA+TGG | 0.545008 | 1.3:-68451933 | MS.gene49179:CDS |
| TTAGGTGGCATCTGCCCACT+TGG | 0.546105 | 1.3:+68452675 | None:intergenic |
| TAGGGTCCTGAGGTTAGGAG+TGG | 0.547849 | 1.3:-68454955 | MS.gene49179:CDS |
| TGTCAATGATGTTGAAGAAG+GGG | 0.549759 | 1.3:-68454827 | MS.gene49179:CDS |
| GAAAAGGGTACAACAGAGGT+TGG | 0.552967 | 1.3:-68451966 | MS.gene49179:CDS |
| GGCTGAAACTTAATTTGTGG+CGG | 0.555450 | 1.3:+68451362 | None:intergenic |
| AGGACTTTCTTGCATTGATG+GGG | 0.562047 | 1.3:+68455562 | None:intergenic |
| ATTGCAATTGCTGTTCGAGA+AGG | 0.562992 | 1.3:-68453189 | MS.gene49179:CDS |
| GGCTTCTGTCCGTAATGCTA+CGG | 0.565887 | 1.3:+68452704 | None:intergenic |
| TGGTCCTTCTACTAATACAA+AGG | 0.568271 | 1.3:-68455241 | MS.gene49179:CDS |
| AAATCCCCACTCCTAACCTC+AGG | 0.568605 | 1.3:+68454949 | None:intergenic |
| AGACAACAGTTGAAGTTCCA+AGG | 0.570123 | 1.3:+68452445 | None:intergenic |
| GTTGTGAAGCAAAGCTTGGG+GGG | 0.571493 | 1.3:+68455588 | None:intergenic |
| TATTAGACATCATGGTTGCA+TGG | 0.573097 | 1.3:+68452469 | None:intergenic |
| TAACGGCCTTTCCCATGCTA+CGG | 0.580211 | 1.3:+68453280 | None:intergenic |
| TTGCCTTCCACTTTGTACAA+GGG | 0.582360 | 1.3:+68451434 | None:intergenic |
| AAGAACGGAATGGTTAAAGA+AGG | 0.585218 | 1.3:-68451468 | MS.gene49179:CDS |
| AGGGACAACTTCAGCAGATG+AGG | 0.586458 | 1.3:+68455542 | None:intergenic |
| TGGTGCAGAACTCCCTATTG+AGG | 0.586537 | 1.3:-68453461 | MS.gene49179:CDS |
| AATCATCTTCGGGTGATACA+GGG | 0.589652 | 1.3:+68455523 | None:intergenic |
| GTAATGTTTCTGGTGGAATG+TGG | 0.589846 | 1.3:-68455308 | MS.gene49179:CDS |
| CTTTCTGGAGAAACTGCACA+TGG | 0.592158 | 1.3:-68453150 | MS.gene49179:CDS |
| ATCACCCGAAGATGATTCAA+AGG | 0.592363 | 1.3:-68455517 | MS.gene49179:intron |
| TCAGATACCTCTGCTCTGGT+TGG | 0.594373 | 1.3:+68453213 | None:intergenic |
| AATACTTGGCCAATATTAGG+TGG | 0.594417 | 1.3:+68452660 | None:intergenic |
| AATTACCTGCAACAAATCCA+AGG | 0.595893 | 1.3:+68451874 | None:intergenic |
| TGTTTCCATATGCAGAAGAA+CGG | 0.596366 | 1.3:-68451483 | MS.gene49179:intron |
| CAAGTTGGTAATGTTTCTGG+TGG | 0.597270 | 1.3:-68455315 | MS.gene49179:CDS |
| CTTCAGGATCTACACATGAC+AGG | 0.598783 | 1.3:-68455674 | MS.gene49179:CDS |
| ATAAGGATATGCCGTAGCAT+GGG | 0.599769 | 1.3:-68453291 | MS.gene49179:CDS |
| GACAACAGTTGAAGTTCCAA+GGG | 0.600278 | 1.3:+68452446 | None:intergenic |
| AATTATTACTGCATCTGATG+GGG | 0.603859 | 1.3:-68453677 | MS.gene49179:intron |
| TAGCCCTTGTACAAAGTGGA+AGG | 0.605384 | 1.3:-68451437 | MS.gene49179:CDS |
| GGTTGTGAAGCAAAGCTTGG+GGG | 0.606575 | 1.3:+68455587 | None:intergenic |
| ATGCAAACATCTCGCTCATG+TGG | 0.611672 | 1.3:+68452493 | None:intergenic |
| CCATATGCAGAAGAACGGAA+TGG | 0.613872 | 1.3:-68451478 | MS.gene49179:intron |
| CCTGAATATTGTGAGTGGAA+TGG | 0.615998 | 1.3:+68451397 | None:intergenic |
| GCTGTTCGAGAAGGTTCCGA+TGG | 0.616692 | 1.3:-68453180 | MS.gene49179:CDS |
| CAGAAGCCGCTTTACCAAGT+GGG | 0.616792 | 1.3:-68452689 | MS.gene49179:CDS |
| TGCAGAACTCCCTATTGAGG+AGG | 0.618747 | 1.3:-68453458 | MS.gene49179:CDS |
| TTGTGGTGAATAGATTGAGG+CGG | 0.619940 | 1.3:-68455364 | MS.gene49179:intron |
| GTCCAGGCTATGGTTGCAAG+AGG | 0.621810 | 1.3:-68453490 | MS.gene49179:intron |
| ATGGAGGAGAGCTCGCGTCA+CGG | 0.623292 | 1.3:-68454186 | MS.gene49179:CDS |
| GGACTTTCTTGCATTGATGG+GGG | 0.628665 | 1.3:+68455563 | None:intergenic |
| CATCTGCCCACTTGGTAAAG+CGG | 0.628930 | 1.3:+68452683 | None:intergenic |
| TGTCTTGGACTTAACCAAGA+AGG | 0.629593 | 1.3:+68454237 | None:intergenic |
| AAGGGATGGAGGCTTTAACA+AGG | 0.630964 | 1.3:+68455644 | None:intergenic |
| GTGAAATGCGAAGTTATCGA+TGG | 0.631985 | 1.3:-68454205 | MS.gene49179:CDS |
| GGAGGTTTGAATGGATCCAG+TGG | 0.635775 | 1.3:+68455710 | None:intergenic |
| CCCCACGCCAACCAGAGCAG+AGG | 0.642045 | 1.3:-68453220 | MS.gene49179:CDS |
| GATATGCCGTAGCATGGGAA+AGG | 0.644726 | 1.3:-68453286 | MS.gene49179:CDS |
| CCTCTGCTCTGGTTGGCGTG+GGG | 0.646850 | 1.3:+68453220 | None:intergenic |
| ACAGAAGCCGCTTTACCAAG+TGG | 0.649319 | 1.3:-68452690 | MS.gene49179:CDS |
| GCTCGTATGAATATGTCTCA+TGG | 0.651990 | 1.3:-68455180 | MS.gene49179:CDS |
| AAATGCGAAGTTATCGATGG+AGG | 0.652757 | 1.3:-68454202 | MS.gene49179:CDS |
| CTTGGTTAAGTCCAAGACAG+CGG | 0.652841 | 1.3:-68454233 | MS.gene49179:CDS |
| GTCATGTGTAGATCCTGAAG+TGG | 0.656544 | 1.3:+68455677 | None:intergenic |
| TGGAATGTGGTCTAAGCCAA+TGG | 0.668652 | 1.3:-68455295 | MS.gene49179:CDS |
| TGAAGTGGGTCGTAAGAGGG+AGG | 0.672720 | 1.3:+68455692 | None:intergenic |
| GTGGAAGGCAACCTATATGG+AGG | 0.675974 | 1.3:-68451422 | MS.gene49179:CDS |
| AATGATTTGGAAACTTGCTG+AGG | 0.679513 | 1.3:-68455217 | MS.gene49179:CDS |
| TCATGTGTAGATCCTGAAGT+GGG | 0.693391 | 1.3:+68455678 | None:intergenic |
| TCGGACCTGAATATTGTGAG+TGG | 0.700079 | 1.3:+68451392 | None:intergenic |
| GCAGGAAAAGGGTACAACAG+AGG | 0.715152 | 1.3:-68451970 | MS.gene49179:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAGAAATTATCAATAAT+GGG | + | chr1.3:68453007-68453026 | None:intergenic | 10.0% |
| !! | AATAATATGGTATTTATTAT+AGG | - | chr1.3:68454138-68454157 | MS.gene49179:CDS | 10.0% |
| !! | ATAATATGGTATTTATTATA+GGG | - | chr1.3:68454139-68454158 | MS.gene49179:CDS | 10.0% |
| !! | TAATAAGAAATTATCAATAA+TGG | + | chr1.3:68453008-68453027 | None:intergenic | 10.0% |
| !! | TAATTGTAAATAGAATAATT+TGG | - | chr1.3:68453709-68453728 | MS.gene49179:CDS | 10.0% |
| !! | TGAACAAATTAAAATTAAAA+TGG | + | chr1.3:68455581-68455600 | None:intergenic | 10.0% |
| !! | AATTTAACAAATAACAGTTA+TGG | - | chr1.3:68455306-68455325 | MS.gene49179:CDS | 15.0% |
| !! | TTCATAAGAAAAAAAATGAT+GGG | - | chr1.3:68451650-68451669 | MS.gene49179:intron | 15.0% |
| !! | TTTCATAAGAAAAAAAATGA+TGG | - | chr1.3:68451649-68451668 | MS.gene49179:intron | 15.0% |
| !!! | AGATTATTTTGAAATGTATT+GGG | - | chr1.3:68454869-68454888 | MS.gene49179:CDS | 15.0% |
| !!! | CTTACCTTTTTTTTTTTTTT+GGG | - | chr1.3:68454927-68454946 | MS.gene49179:CDS | 15.0% |
| !!! | TCTTACCTTTTTTTTTTTTT+TGG | - | chr1.3:68454926-68454945 | MS.gene49179:CDS | 15.0% |
| !!! | TTATTTTTCTCTGATTTTTA+GGG | - | chr1.3:68452124-68452143 | MS.gene49179:intron | 15.0% |
| !!! | TTTATTTTTCTCTGATTTTT+AGG | - | chr1.3:68452123-68452142 | MS.gene49179:intron | 15.0% |
| !! | AACTGAAATTGAAGAAATAT+CGG | + | chr1.3:68454023-68454042 | None:intergenic | 20.0% |
| !! | ACAAATAAACTTTAATGAGA+AGG | + | chr1.3:68452051-68452070 | None:intergenic | 20.0% |
| !! | ACAAATTAATGAAATAATGC+AGG | + | chr1.3:68453458-68453477 | None:intergenic | 20.0% |
| !! | AGAAGTTCATAAATGTATAA+AGG | + | chr1.3:68455443-68455462 | None:intergenic | 20.0% |
| !! | ATTTCTCTTTATTATATTGC+AGG | - | chr1.3:68454339-68454358 | MS.gene49179:intron | 20.0% |
| !! | CAATACATAATTTCTATTAG+TGG | - | chr1.3:68454281-68454300 | MS.gene49179:intron | 20.0% |
| !! | CACAATTCAACAAAATAAAT+CGG | + | chr1.3:68455016-68455035 | None:intergenic | 20.0% |
| !! | CACTAATAGAAATTATGTAT+TGG | + | chr1.3:68454283-68454302 | None:intergenic | 20.0% |
| !! | CATTAAATTCTTACCATTAA+TGG | + | chr1.3:68454213-68454232 | None:intergenic | 20.0% |
| !! | CTTAGAAAGGAATATAAATA+TGG | - | chr1.3:68454043-68454062 | MS.gene49179:intron | 20.0% |
| !! | TCTCATTAAAGTTTATTTGT+TGG | - | chr1.3:68452051-68452070 | MS.gene49179:intron | 20.0% |
| !! | TTGGAAGATATCTTTAATAT+GGG | - | chr1.3:68455247-68455266 | MS.gene49179:CDS | 20.0% |
| !! | TTTGGAAGATATCTTTAATA+TGG | - | chr1.3:68455246-68455265 | MS.gene49179:CDS | 20.0% |
| !!! | AGTGAGAAAATTTGATTTTT+AGG | - | chr1.3:68451675-68451694 | MS.gene49179:intron | 20.0% |
| !!! | CTTTAATTTCATTCCATTAA+TGG | - | chr1.3:68454197-68454216 | MS.gene49179:CDS | 20.0% |
| !!! | GAAATGTGATTTATTCTTTT+TGG | - | chr1.3:68454571-68454590 | MS.gene49179:intron | 20.0% |
| !!! | GAGATTATTTTGAAATGTAT+TGG | - | chr1.3:68454868-68454887 | MS.gene49179:CDS | 20.0% |
| !!! | TCATAAGAAAGTTATTGATT+TGG | - | chr1.3:68451952-68451971 | MS.gene49179:CDS | 20.0% |
| ! | AAAGGTAAGACTAATTATTG+AGG | + | chr1.3:68454916-68454935 | None:intergenic | 25.0% |
| ! | AATTAGAACTGAACTCTAAT+TGG | - | chr1.3:68455535-68455554 | MS.gene49179:CDS | 25.0% |
| ! | ACAAAATAAATCGGATTGAT+CGG | + | chr1.3:68455007-68455026 | None:intergenic | 25.0% |
| ! | ACTAAGATTGTTTGTACTAT+TGG | - | chr1.3:68451836-68451855 | MS.gene49179:intron | 25.0% |
| ! | AGAAACATAAATCTTTAGCA+TGG | - | chr1.3:68453527-68453546 | MS.gene49179:intron | 25.0% |
| ! | ATAATCTCTCAAACATACTT+AGG | + | chr1.3:68454856-68454875 | None:intergenic | 25.0% |
| ! | ATGTATTGGGTTAAATTGTT+TGG | - | chr1.3:68454882-68454901 | MS.gene49179:CDS | 25.0% |
| ! | ATTTCCTTTGTATTAGTAGA+AGG | + | chr1.3:68451863-68451882 | None:intergenic | 25.0% |
| ! | CCAACCCAAAAAAAAAAAAA+AGG | + | chr1.3:68454934-68454953 | None:intergenic | 25.0% |
| ! | CTAATACAAAGGAAATGATT+TGG | - | chr1.3:68451867-68451886 | MS.gene49179:intron | 25.0% |
| ! | CTTTAATGAGAAGGAAAAAA+AGG | + | chr1.3:68452042-68452061 | None:intergenic | 25.0% |
| ! | GTAATAATTGAATGCAAGTT+CGG | + | chr1.3:68453409-68453428 | None:intergenic | 25.0% |
| ! | TAATGAAATAATGCAGGATT+AGG | + | chr1.3:68453452-68453471 | None:intergenic | 25.0% |
| ! | TTCAATTTCAGTTCTTAGAA+AGG | - | chr1.3:68454030-68454049 | MS.gene49179:intron | 25.0% |
| ! | TTGTCAAATAGTTGTTATAG+TGG | + | chr1.3:68452650-68452669 | None:intergenic | 25.0% |
| !! | AATTTTTAACATGTGCCTTA+AGG | - | chr1.3:68454304-68454323 | MS.gene49179:intron | 25.0% |
| !! | ATTTTTAACATGTGCCTTAA+GGG | - | chr1.3:68454305-68454324 | MS.gene49179:intron | 25.0% |
| !! | CTTTTCTGCAACAAATTAAA+AGG | + | chr1.3:68453120-68453139 | None:intergenic | 25.0% |
| !! | GCTAAAGATTTATGTTTCTA+CGG | + | chr1.3:68453526-68453545 | None:intergenic | 25.0% |
| !!! | CCTTTTTTTTTTTTTTGGGT+TGG | - | chr1.3:68454931-68454950 | MS.gene49179:CDS | 25.0% |
| !!! | CTTTTAATTTGTTGCAGAAA+AGG | - | chr1.3:68453118-68453137 | MS.gene49179:intron | 25.0% |
| !!! | GAAAGTTATTGATTTGGTTA+AGG | - | chr1.3:68451958-68451977 | MS.gene49179:CDS | 25.0% |
| !!! | TAGTCATCTTCTATTTTAAG+AGG | + | chr1.3:68454791-68454810 | None:intergenic | 25.0% |
| !!! | TTTGGTGTTTTTTCGATAAT+TGG | - | chr1.3:68453727-68453746 | MS.gene49179:CDS | 25.0% |
| AAGTTTAGACCTTGAATACT+TGG | + | chr1.3:68454454-68454473 | None:intergenic | 30.0% | |
| AATTATTACTGCATCTGATG+GGG | - | chr1.3:68453420-68453439 | MS.gene49179:intron | 30.0% | |
| ACAAACCTTTGAATCATCTT+CGG | + | chr1.3:68451588-68451607 | None:intergenic | 30.0% | |
| AGCGAAATAAGAATAAGAGA+TGG | + | chr1.3:68451618-68451637 | None:intergenic | 30.0% | |
| AGTCAGAAATTCACATAAGA+TGG | + | chr1.3:68452811-68452830 | None:intergenic | 30.0% | |
| ATTCACCACAAAAACCAAAA+GGG | + | chr1.3:68451724-68451743 | None:intergenic | 30.0% | |
| CAACCAATCATGTTAAAAAC+TGG | - | chr1.3:68452175-68452194 | MS.gene49179:intron | 30.0% | |
| CAATTATTACTGCATCTGAT+GGG | - | chr1.3:68453419-68453438 | MS.gene49179:intron | 30.0% | |
| CATAAATGTATAAAGGTCGA+TGG | + | chr1.3:68455436-68455455 | None:intergenic | 30.0% | |
| CATATTTGTGGCTACAATAA+CGG | + | chr1.3:68453837-68453856 | None:intergenic | 30.0% | |
| CGGCAATGAATAAAATATTC+CGG | - | chr1.3:68454540-68454559 | MS.gene49179:intron | 30.0% | |
| CTGATCAGTAAAAGCAAATA+TGG | + | chr1.3:68454732-68454751 | None:intergenic | 30.0% | |
| GACAGAAAACGACAATAATA+TGG | - | chr1.3:68454125-68454144 | MS.gene49179:intron | 30.0% | |
| GTCAATTTCCTATTTATCTC+TGG | - | chr1.3:68452755-68452774 | MS.gene49179:intron | 30.0% | |
| GTGCTAAATGATTGATGAAT+CGG | - | chr1.3:68452366-68452385 | MS.gene49179:intron | 30.0% | |
| TAAATATTGTCTGCTGCAAA+GGG | - | chr1.3:68452435-68452454 | MS.gene49179:CDS | 30.0% | |
| TAATATTGGCCAAGTATTCA+AGG | - | chr1.3:68454442-68454461 | MS.gene49179:intron | 30.0% | |
| TATAGGTTCATTAATGCATG+CGG | - | chr1.3:68455396-68455415 | MS.gene49179:intron | 30.0% | |
| TATTCACCACAAAAACCAAA+AGG | + | chr1.3:68451725-68451744 | None:intergenic | 30.0% | |
| TCAATTATTACTGCATCTGA+TGG | - | chr1.3:68453418-68453437 | MS.gene49179:intron | 30.0% | |
| TCAGAGAATTCCATGTAAAT+AGG | + | chr1.3:68455177-68455196 | None:intergenic | 30.0% | |
| TCGAACATTTAACCATGTAT+AGG | - | chr1.3:68455379-68455398 | MS.gene49179:intron | 30.0% | |
| TGCATTAATGAACCTATACA+TGG | + | chr1.3:68455394-68455413 | None:intergenic | 30.0% | |
| TTAAATATTGTCTGCTGCAA+AGG | - | chr1.3:68452434-68452453 | MS.gene49179:CDS | 30.0% | |
| TTGAATACTTGGCCAATATT+AGG | + | chr1.3:68454443-68454462 | None:intergenic | 30.0% | |
| TTGTCAATGATGTTGAAGAA+GGG | - | chr1.3:68452269-68452288 | MS.gene49179:intron | 30.0% | |
| TTTGTCAATGATGTTGAAGA+AGG | - | chr1.3:68452268-68452287 | MS.gene49179:intron | 30.0% | |
| ! | AACAATTTTACCTGCAAAAG+CGG | + | chr1.3:68453667-68453686 | None:intergenic | 30.0% |
| ! | AACTCAGTTGACATTTTCAT+TGG | + | chr1.3:68455506-68455525 | None:intergenic | 30.0% |
| ! | AGCTTTGACATTCTTATTGT+TGG | - | chr1.3:68452724-68452743 | MS.gene49179:CDS | 30.0% |
| ! | ATTACTTTCGCAGCTTTAAT+TGG | + | chr1.3:68454368-68454387 | None:intergenic | 30.0% |
| ! | ATTTGTTGCAGAAAAGGATT+GGG | - | chr1.3:68453124-68453143 | MS.gene49179:intron | 30.0% |
| ! | TAATTGGACTTGCTTAAACA+AGG | - | chr1.3:68455551-68455570 | MS.gene49179:CDS | 30.0% |
| ! | TTAGTCTTTCTTCTAACCAT+TGG | + | chr1.3:68451821-68451840 | None:intergenic | 30.0% |
| ! | TTTTTGTGGTGAATAGATTG+AGG | - | chr1.3:68451730-68451749 | MS.gene49179:intron | 30.0% |
| !! | AATTTGTTGCAGAAAAGGAT+TGG | - | chr1.3:68453123-68453142 | MS.gene49179:intron | 30.0% |
| !! | AGAAGTTCTTAGAAGTACTA+TGG | + | chr1.3:68455286-68455305 | None:intergenic | 30.0% |
| !! | ATTTGACAACATTGATTCCA+AGG | - | chr1.3:68452661-68452680 | MS.gene49179:CDS | 30.0% |
| !! | GTTTTTAACATGATTGGTTG+TGG | + | chr1.3:68452175-68452194 | None:intergenic | 30.0% |
| !! | TCATTAATTTGTTGCCTAAC+TGG | - | chr1.3:68453466-68453485 | MS.gene49179:CDS | 30.0% |
| !!! | CTTTGTTGTTGACCTAATTT+TGG | - | chr1.3:68455097-68455116 | MS.gene49179:CDS | 30.0% |
| !!! | GATTTGTTGCAGGTAATTTT+TGG | - | chr1.3:68455228-68455247 | MS.gene49179:CDS | 30.0% |
| !!! | TTTTGTTCACTGATTTACTC+TGG | - | chr1.3:68453556-68453575 | MS.gene49179:intron | 30.0% |
| AAAGCTTAACATGTGCTCTA+AGG | + | chr1.3:68454181-68454200 | None:intergenic | 35.0% | |
| AAAGTCTAACCAGTGATTGA+AGG | + | chr1.3:68452973-68452992 | None:intergenic | 35.0% | |
| AAATATTGTCTGCTGCAAAG+GGG | - | chr1.3:68452436-68452455 | MS.gene49179:CDS | 35.0% | |
| AACTGTTGTCTTCACTAGAT+CGG | - | chr1.3:68454664-68454683 | MS.gene49179:intron | 35.0% | |
| AAGAACGGAATGGTTAAAGA+AGG | - | chr1.3:68455629-68455648 | MS.gene49179:CDS | 35.0% | |
| AAGCTTAACATGTGCTCTAA+GGG | + | chr1.3:68454180-68454199 | None:intergenic | 35.0% | |
| AAGGAAAAAAAGGCTTACCT+TGG | + | chr1.3:68452032-68452051 | None:intergenic | 35.0% | |
| AATACTTGGCCAATATTAGG+TGG | + | chr1.3:68454440-68454459 | None:intergenic | 35.0% | |
| AATCACATTTCAGTGTCAAC+CGG | + | chr1.3:68454562-68454581 | None:intergenic | 35.0% | |
| AATCATGTTAAAAACTGGCC+AGG | - | chr1.3:68452180-68452199 | MS.gene49179:intron | 35.0% | |
| AATTACCTGCAACAAATCCA+AGG | + | chr1.3:68455226-68455245 | None:intergenic | 35.0% | |
| AGGTTTAAGCAACAAGAGAA+AGG | + | chr1.3:68454771-68454790 | None:intergenic | 35.0% | |
| ATCGATAACTTCGCATTTCA+CGG | + | chr1.3:68452893-68452912 | None:intergenic | 35.0% | |
| CAAACCTTTGAATCATCTTC+GGG | + | chr1.3:68451587-68451606 | None:intergenic | 35.0% | |
| CAATGCAGGAAGAGATAATA+AGG | - | chr1.3:68453789-68453808 | MS.gene49179:intron | 35.0% | |
| CATACTTTCCAGCATATTTG+TGG | + | chr1.3:68453849-68453868 | None:intergenic | 35.0% | |
| CTGTACTAAAGAGGTTATTG+TGG | - | chr1.3:68452585-68452604 | MS.gene49179:intron | 35.0% | |
| GAAGAAATATCGGAATGTCA+AGG | + | chr1.3:68454013-68454032 | None:intergenic | 35.0% | |
| GATAACACTCTGTACTAAAG+AGG | - | chr1.3:68452576-68452595 | MS.gene49179:intron | 35.0% | |
| GATTGGGATGACATCAAATT+TGG | - | chr1.3:68453140-68453159 | MS.gene49179:intron | 35.0% | |
| GGATAGTAAAAGTGAATTCC+TGG | + | chr1.3:68452201-68452220 | None:intergenic | 35.0% | |
| GTTGGTATGATGATATCTTC+AGG | - | chr1.3:68452069-68452088 | MS.gene49179:intron | 35.0% | |
| TAACTATGCACATTGAGATG+TGG | + | chr1.3:68453990-68454009 | None:intergenic | 35.0% | |
| TAAGCAACAAGAGAAAGGTA+GGG | + | chr1.3:68454766-68454785 | None:intergenic | 35.0% | |
| TAATCGAGCAAACTAATCAG+TGG | + | chr1.3:68453297-68453316 | None:intergenic | 35.0% | |
| TATTAGACATCATGGTTGCA+TGG | + | chr1.3:68454631-68454650 | None:intergenic | 35.0% | |
| TATTGTAGCCACAAATATGC+TGG | - | chr1.3:68453838-68453857 | MS.gene49179:intron | 35.0% | |
| TGACTCTTGATGTATGATGT+AGG | - | chr1.3:68452826-68452845 | MS.gene49179:intron | 35.0% | |
| TGATGATATCTTCAGGATCA+CGG | - | chr1.3:68452076-68452095 | MS.gene49179:intron | 35.0% | |
| TGCATCCTTAACGAAAGAAA+CGG | + | chr1.3:68453192-68453211 | None:intergenic | 35.0% | |
| TGGTCCTTCTACTAATACAA+AGG | - | chr1.3:68451856-68451875 | MS.gene49179:intron | 35.0% | |
| TGTCAATGATGTTGAAGAAG+GGG | - | chr1.3:68452270-68452289 | MS.gene49179:intron | 35.0% | |
| TGTTTCCATATGCAGAAGAA+CGG | - | chr1.3:68455614-68455633 | MS.gene49179:CDS | 35.0% | |
| TTAAGCAACAAGAGAAAGGT+AGG | + | chr1.3:68454767-68454786 | None:intergenic | 35.0% | |
| ! | GAAAATTGTTGTGACCCTTT+TGG | - | chr1.3:68451707-68451726 | MS.gene49179:intron | 35.0% |
| ! | GTGTTGCCATTTGTCAATTA+CGG | - | chr1.3:68452489-68452508 | MS.gene49179:CDS | 35.0% |
| ! | TGGCCAGTTTTTAACATGAT+TGG | + | chr1.3:68452181-68452200 | None:intergenic | 35.0% |
| ! | TGTTGTTGACCTAATTTTGG+TGG | - | chr1.3:68455100-68455119 | MS.gene49179:CDS | 35.0% |
| ! | TTACACGTTTTGCAACAAGT+TGG | - | chr1.3:68451767-68451786 | MS.gene49179:intron | 35.0% |
| ! | TTCAATCACTGGTTAGACTT+TGG | - | chr1.3:68452972-68452991 | MS.gene49179:intron | 35.0% |
| ! | TTTTCGTCTTCTCTGTATGT+GGG | - | chr1.3:68453040-68453059 | MS.gene49179:intron | 35.0% |
| ! | TTTTTCGTCTTCTCTGTATG+TGG | - | chr1.3:68453039-68453058 | MS.gene49179:intron | 35.0% |
| !! | AACTACCCTCGTTTTAATGT+CGG | - | chr1.3:68454520-68454539 | MS.gene49179:intron | 35.0% |
| !! | AAGATTTTGGAGAAAAGGGA+TGG | + | chr1.3:68451470-68451489 | None:intergenic | 35.0% |
| !! | AATGATTTGGAAACTTGCTG+AGG | - | chr1.3:68451880-68451899 | MS.gene49179:CDS | 35.0% |
| !! | AATGTTAACTTGTGCCCTTA+AGG | + | chr1.3:68454322-68454341 | None:intergenic | 35.0% |
| !! | AGTTCTTAGAAGTACTATGG+AGG | + | chr1.3:68455283-68455302 | None:intergenic | 35.0% |
| !! | CAACAAGTTGGTAATGTTTC+TGG | - | chr1.3:68451779-68451798 | MS.gene49179:intron | 35.0% |
| !! | TAAGGTTATGTTGGTTTCCA+AGG | - | chr1.3:68453083-68453102 | MS.gene49179:intron | 35.0% |
| !! | TCCAGAAAGCATTATTCCAT+CGG | + | chr1.3:68453936-68453955 | None:intergenic | 35.0% |
| !! | TGGGAAGATTTTGGAGAAAA+GGG | + | chr1.3:68451474-68451493 | None:intergenic | 35.0% |
| !! | TTCACTTTTACTATCCAGAG+TGG | - | chr1.3:68452205-68452224 | MS.gene49179:intron | 35.0% |
| AAAAGGAATGTTATGCGCCT+TGG | + | chr1.3:68453103-68453122 | None:intergenic | 40.0% | |
| AAAGTGGAAGGCAACCTATA+TGG | - | chr1.3:68455672-68455691 | MS.gene49179:CDS | 40.0% | |
| AAATGCGAAGTTATCGATGG+AGG | - | chr1.3:68452895-68452914 | MS.gene49179:intron | 40.0% | |
| AAGCAACAAGAGAAAGGTAG+GGG | + | chr1.3:68454765-68454784 | None:intergenic | 40.0% | |
| AATAAGGATATGCCGTAGCA+TGG | - | chr1.3:68453805-68453824 | MS.gene49179:intron | 40.0% | |
| AATATCAGATACCTCTGCTC+TGG | + | chr1.3:68453891-68453910 | None:intergenic | 40.0% | |
| AATATTGTCTGCTGCAAAGG+GGG | - | chr1.3:68452437-68452456 | MS.gene49179:CDS | 40.0% | |
| AATCATCTTCGGGTGATACA+GGG | + | chr1.3:68451577-68451596 | None:intergenic | 40.0% | |
| ACAGGATGGTAAAAGAAGAC+AGG | + | chr1.3:68453589-68453608 | None:intergenic | 40.0% | |
| ACCATGATGTCTAATACCCT+TGG | - | chr1.3:68454635-68454654 | MS.gene49179:intron | 40.0% | |
| ACTGTTGTCTTCACTAGATC+GGG | - | chr1.3:68454665-68454684 | MS.gene49179:intron | 40.0% | |
| AGACAACAGTTGAAGTTCCA+AGG | + | chr1.3:68454655-68454674 | None:intergenic | 40.0% | |
| AGAGACATTCACAAAAGCCT+TGG | - | chr1.3:68455206-68455225 | MS.gene49179:CDS | 40.0% | |
| ATAAGGATATGCCGTAGCAT+GGG | - | chr1.3:68453806-68453825 | MS.gene49179:intron | 40.0% | |
| ATCACCCGAAGATGATTCAA+AGG | - | chr1.3:68451580-68451599 | MS.gene49179:intron | 40.0% | |
| ATGCATGCGGTAATTAACCA+CGG | - | chr1.3:68455409-68455428 | MS.gene49179:intron | 40.0% | |
| CAATTCCACTCATCAAATGC+AGG | - | chr1.3:68453331-68453350 | MS.gene49179:intron | 40.0% | |
| CATTGCCGACATTAAAACGA+GGG | + | chr1.3:68454528-68454547 | None:intergenic | 40.0% | |
| CATTTGTCAATTACGGATCG+CGG | - | chr1.3:68452496-68452515 | MS.gene49179:CDS | 40.0% | |
| CCATTCCACTCACAATATTC+AGG | - | chr1.3:68455700-68455719 | MS.gene49179:CDS | 40.0% | |
| CCTGAATATTGTGAGTGGAA+TGG | + | chr1.3:68455703-68455722 | None:intergenic | 40.0% | |
| CGGAGACATTTGAATGTTAG+AGG | - | chr1.3:68452931-68452950 | MS.gene49179:intron | 40.0% | |
| CTCTTGATGTATGATGTAGG+TGG | - | chr1.3:68452829-68452848 | MS.gene49179:intron | 40.0% | |
| GACAACAGTTGAAGTTCCAA+GGG | + | chr1.3:68454654-68454673 | None:intergenic | 40.0% | |
| GCTCGTATGAATATGTCTCA+TGG | - | chr1.3:68451917-68451936 | MS.gene49179:CDS | 40.0% | |
| GTGAAATGCGAAGTTATCGA+TGG | - | chr1.3:68452892-68452911 | MS.gene49179:intron | 40.0% | |
| TAATCCCGATTCTCCAAATC+AGG | + | chr1.3:68453492-68453511 | None:intergenic | 40.0% | |
| TAATGCACACCGTAGCATTA+CGG | - | chr1.3:68454384-68454403 | MS.gene49179:intron | 40.0% | |
| TATCTTCAGGATCACGGTAT+CGG | - | chr1.3:68452082-68452101 | MS.gene49179:intron | 40.0% | |
| TCACGCTTCCAGAGATAAAT+AGG | + | chr1.3:68452766-68452785 | None:intergenic | 40.0% | |
| TCATGTGTAGATCCTGAAGT+GGG | + | chr1.3:68451422-68451441 | None:intergenic | 40.0% | |
| TCATTGCCGACATTAAAACG+AGG | + | chr1.3:68454529-68454548 | None:intergenic | 40.0% | |
| TCCATAATGCTTGTCAATGC+AGG | - | chr1.3:68453775-68453794 | MS.gene49179:intron | 40.0% | |
| TCCGATGGAATAATGCTTTC+TGG | - | chr1.3:68453932-68453951 | MS.gene49179:CDS | 40.0% | |
| TGAGGACTTTCTTGCATTGA+TGG | + | chr1.3:68451540-68451559 | None:intergenic | 40.0% | |
| TGCAATTATGCTTGACACCA+AGG | - | chr1.3:68452012-68452031 | MS.gene49179:intron | 40.0% | |
| TGTCTTGGACTTAACCAAGA+AGG | + | chr1.3:68452863-68452882 | None:intergenic | 40.0% | |
| TTGCCTTCCACTTTGTACAA+GGG | + | chr1.3:68455666-68455685 | None:intergenic | 40.0% | |
| TTGTGGTGAATAGATTGAGG+CGG | - | chr1.3:68451733-68451752 | MS.gene49179:intron | 40.0% | |
| ! | AGACTTAGGTGGGAAGATTT+TGG | + | chr1.3:68451483-68451502 | None:intergenic | 40.0% |
| ! | AGGACTTTCTTGCATTGATG+GGG | + | chr1.3:68451538-68451557 | None:intergenic | 40.0% |
| ! | ATTGCAATTGCTGTTCGAGA+AGG | - | chr1.3:68453908-68453927 | MS.gene49179:CDS | 40.0% |
| ! | CTATGCCGTTTCTTTCGTTA+AGG | - | chr1.3:68453184-68453203 | MS.gene49179:CDS | 40.0% |
| ! | GAGGACTTTCTTGCATTGAT+GGG | + | chr1.3:68451539-68451558 | None:intergenic | 40.0% |
| ! | TCCTGCATTGACAAGCATTA+TGG | + | chr1.3:68453779-68453798 | None:intergenic | 40.0% |
| !! | AAAAGCCTTGGATTTGTTGC+AGG | - | chr1.3:68455218-68455237 | MS.gene49179:CDS | 40.0% |
| !! | ATTTTGGAGAAAAGGGATGG+AGG | + | chr1.3:68451467-68451486 | None:intergenic | 40.0% |
| !! | CAAGTTGGTAATGTTTCTGG+TGG | - | chr1.3:68451782-68451801 | MS.gene49179:intron | 40.0% |
| !! | GTAATGTTTCTGGTGGAATG+TGG | - | chr1.3:68451789-68451808 | MS.gene49179:intron | 40.0% |
| !! | GTGGGAAGATTTTGGAGAAA+AGG | + | chr1.3:68451475-68451494 | None:intergenic | 40.0% |
| !! | TCCAAGGGTATTAGACATCA+TGG | + | chr1.3:68454639-68454658 | None:intergenic | 40.0% |
| !!! | ATTTTTAGGGTCCTGAGGTT+AGG | - | chr1.3:68452137-68452156 | MS.gene49179:intron | 40.0% |
| !!! | TGTGACCCTTTTGGTTTTTG+TGG | - | chr1.3:68451716-68451735 | MS.gene49179:intron | 40.0% |
| AAAAGCGGAACCTCCTCAAT+AGG | + | chr1.3:68453652-68453671 | None:intergenic | 45.0% | |
| AAAGCAAATATGGTGCCTGC+AGG | + | chr1.3:68454722-68454741 | None:intergenic | 45.0% | |
| AAAGCGGAACCTCCTCAATA+GGG | + | chr1.3:68453651-68453670 | None:intergenic | 45.0% | |
| AATTTGTGGCGGCTACTGTT+CGG | + | chr1.3:68455727-68455746 | None:intergenic | 45.0% | |
| AGCACCAAGTCTTTGACTGT+AGG | - | chr1.3:68452785-68452804 | MS.gene49179:intron | 45.0% | |
| AGGCGTCTGTCCTATTTACA+TGG | - | chr1.3:68455164-68455183 | MS.gene49179:CDS | 45.0% | |
| AGGTGGTATGATGTCCTTCT+TGG | - | chr1.3:68452846-68452865 | MS.gene49179:intron | 45.0% | |
| AGGTTGTGAAGCAAAGCTTG+GGG | + | chr1.3:68451514-68451533 | None:intergenic | 45.0% | |
| ATGCAAACATCTCGCTCATG+TGG | + | chr1.3:68454607-68454626 | None:intergenic | 45.0% | |
| ATGGCCTACAGTCAAAGACT+TGG | + | chr1.3:68452792-68452811 | None:intergenic | 45.0% | |
| ATGGTTGCAAGAGGAGATCT+TGG | - | chr1.3:68453616-68453635 | MS.gene49179:intron | 45.0% | |
| CATGCTTCTTGTTGACGGTA+TGG | - | chr1.3:68452294-68452313 | MS.gene49179:intron | 45.0% | |
| CCATATGCAGAAGAACGGAA+TGG | - | chr1.3:68455619-68455638 | MS.gene49179:CDS | 45.0% | |
| CCATTCCGTTCTTCTGCATA+TGG | + | chr1.3:68455622-68455641 | None:intergenic | 45.0% | |
| CGCGATCCGTAATTGACAAA+TGG | + | chr1.3:68452498-68452517 | None:intergenic | 45.0% | |
| CTTCACTAGATCGGGTTTCA+TGG | - | chr1.3:68454673-68454692 | MS.gene49179:intron | 45.0% | |
| CTTCAGGATCTACACATGAC+AGG | - | chr1.3:68451423-68451442 | MS.gene49179:CDS | 45.0% | |
| CTTGGTTAAGTCCAAGACAG+CGG | - | chr1.3:68452864-68452883 | MS.gene49179:intron | 45.0% | |
| GAAGTAGCCCTTGTACAAAG+TGG | - | chr1.3:68455656-68455675 | MS.gene49179:CDS | 45.0% | |
| GAATCATCTTCGGGTGATAC+AGG | + | chr1.3:68451578-68451597 | None:intergenic | 45.0% | |
| GAGGTTGTGAAGCAAAGCTT+GGG | + | chr1.3:68451515-68451534 | None:intergenic | 45.0% | |
| GGGGATTGTTAGACTTAGGT+GGG | + | chr1.3:68451493-68451512 | None:intergenic | 45.0% | |
| GTCATGTGTAGATCCTGAAG+TGG | + | chr1.3:68451423-68451442 | None:intergenic | 45.0% | |
| GTGGAATGGAACCTCCATAT+AGG | + | chr1.3:68455689-68455708 | None:intergenic | 45.0% | |
| GTTGCCTTCCACTTTGTACA+AGG | + | chr1.3:68455667-68455686 | None:intergenic | 45.0% | |
| GTTGGGGGTTAAGGTTATGT+TGG | - | chr1.3:68453074-68453093 | MS.gene49179:intron | 45.0% | |
| TAGCCCTTGTACAAAGTGGA+AGG | - | chr1.3:68455660-68455679 | MS.gene49179:CDS | 45.0% | |
| TCGGACCTGAATATTGTGAG+TGG | + | chr1.3:68455708-68455727 | None:intergenic | 45.0% | |
| TCGTAAGAGGGAGGTTTGAA+TGG | + | chr1.3:68451399-68451418 | None:intergenic | 45.0% | |
| TGAATAGATTGAGGCGGAGT+TGG | - | chr1.3:68451739-68451758 | MS.gene49179:intron | 45.0% | |
| TGGAATGTGGTCTAAGCCAA+TGG | - | chr1.3:68451802-68451821 | MS.gene49179:intron | 45.0% | |
| TTCTCCAAATCAGGCCAGTT+AGG | + | chr1.3:68453483-68453502 | None:intergenic | 45.0% | |
| TTGGGGGGATTGTTAGACTT+AGG | + | chr1.3:68451497-68451516 | None:intergenic | 45.0% | |
| TTTACTATCCAGAGTGGCGT+TGG | - | chr1.3:68452211-68452230 | MS.gene49179:intron | 45.0% | |
| ! | AAGGGATGGAGGCTTTAACA+AGG | + | chr1.3:68451456-68451475 | None:intergenic | 45.0% |
| ! | CTTCTTTTACCATCCTGTCC+AGG | - | chr1.3:68453591-68453610 | MS.gene49179:intron | 45.0% |
| ! | CTTTCTGGAGAAACTGCACA+TGG | - | chr1.3:68453947-68453966 | MS.gene49179:CDS | 45.0% |
| ! | GAAAAGGGTACAACAGAGGT+TGG | - | chr1.3:68455131-68455150 | MS.gene49179:CDS | 45.0% |
| ! | GGACTTTCTTGCATTGATGG+GGG | + | chr1.3:68451537-68451556 | None:intergenic | 45.0% |
| ! | TGTTGTACCCTTTTCCTGCA+TGG | + | chr1.3:68455126-68455145 | None:intergenic | 45.0% |
| !! | ACATTGATTCCAAGGCAGTC+TGG | - | chr1.3:68452669-68452688 | MS.gene49179:CDS | 45.0% |
| !! | ACTGGCCTGATTTGGAGAAT+CGG | - | chr1.3:68453484-68453503 | MS.gene49179:CDS | 45.0% |
| !! | ATTTGGAAACTTGCTGAGGC+TGG | - | chr1.3:68451884-68451903 | MS.gene49179:CDS | 45.0% |
| !! | CAGAGGTTGGCTTTGTATCA+AGG | - | chr1.3:68455144-68455163 | MS.gene49179:CDS | 45.0% |
| !! | TTGGGTTGGATATCTGTGCT+TGG | - | chr1.3:68454945-68454964 | MS.gene49179:CDS | 45.0% |
| !!! | CTCTGATTTTTAGGGTCCTG+AGG | - | chr1.3:68452132-68452151 | MS.gene49179:intron | 45.0% |
| AAATCCCCACTCCTAACCTC+AGG | + | chr1.3:68452151-68452170 | None:intergenic | 50.0% | |
| AGGGACAACTTCAGCAGATG+AGG | + | chr1.3:68451558-68451577 | None:intergenic | 50.0% | |
| ATCCTGAAGTGGGTCGTAAG+AGG | + | chr1.3:68451412-68451431 | None:intergenic | 50.0% | |
| CACAGCCTGCATTTGATGAG+TGG | + | chr1.3:68453339-68453358 | None:intergenic | 50.0% | |
| CACTCATCAAATGCAGGCTG+TGG | - | chr1.3:68453337-68453356 | MS.gene49179:intron | 50.0% | |
| CATCTGCCCACTTGGTAAAG+CGG | + | chr1.3:68454417-68454436 | None:intergenic | 50.0% | |
| CCTGCATGGCCACCAAAATT+AGG | + | chr1.3:68455112-68455131 | None:intergenic | 50.0% | |
| GATATGCCGTAGCATGGGAA+AGG | - | chr1.3:68453811-68453830 | MS.gene49179:intron | 50.0% | |
| GCAACACTGCCTTCAATCAC+TGG | - | chr1.3:68452961-68452980 | MS.gene49179:intron | 50.0% | |
| GGAGGTTGTGAAGCAAAGCT+TGG | + | chr1.3:68451516-68451535 | None:intergenic | 50.0% | |
| GGAGGTTTGAATGGATCCAG+TGG | + | chr1.3:68451390-68451409 | None:intergenic | 50.0% | |
| GGCTTCTGTCCGTAATGCTA+CGG | + | chr1.3:68454396-68454415 | None:intergenic | 50.0% | |
| GGGCAGATGCCACCTAATAT+TGG | - | chr1.3:68454428-68454447 | MS.gene49179:intron | 50.0% | |
| GGGGACATGCTTCTTGTTGA+CGG | - | chr1.3:68452289-68452308 | MS.gene49179:intron | 50.0% | |
| GGGGGATTGTTAGACTTAGG+TGG | + | chr1.3:68451494-68451513 | None:intergenic | 50.0% | |
| GGTTGTGAAGCAAAGCTTGG+GGG | + | chr1.3:68451513-68451532 | None:intergenic | 50.0% | |
| GTATAAAGGTCGATGGACCG+TGG | + | chr1.3:68455429-68455448 | None:intergenic | 50.0% | |
| GTGGAAGGCAACCTATATGG+AGG | - | chr1.3:68455675-68455694 | MS.gene49179:CDS | 50.0% | |
| GTTGTGAAGCAAAGCTTGGG+GGG | + | chr1.3:68451512-68451531 | None:intergenic | 50.0% | |
| TAACGGCCTTTCCCATGCTA+CGG | + | chr1.3:68453820-68453839 | None:intergenic | 50.0% | |
| TCAGATACCTCTGCTCTGGT+TGG | + | chr1.3:68453887-68453906 | None:intergenic | 50.0% | |
| TCCTGAAGTGGGTCGTAAGA+GGG | + | chr1.3:68451411-68451430 | None:intergenic | 50.0% | |
| TGCAGAACTCCCTATTGAGG+AGG | - | chr1.3:68453639-68453658 | MS.gene49179:intron | 50.0% | |
| TGGTGCAGAACTCCCTATTG+AGG | - | chr1.3:68453636-68453655 | MS.gene49179:intron | 50.0% | |
| TTACCATCCTGTCCAGGCTA+TGG | - | chr1.3:68453597-68453616 | MS.gene49179:intron | 50.0% | |
| TTGAGCCATTATCGACCTGC+AGG | - | chr1.3:68454704-68454723 | MS.gene49179:intron | 50.0% | |
| TTTCACGGAATCCGCTGTCT+TGG | + | chr1.3:68452878-68452897 | None:intergenic | 50.0% | |
| ! | ACAGAAGCCGCTTTACCAAG+TGG | - | chr1.3:68454407-68454426 | MS.gene49179:intron | 50.0% |
| ! | ATGTCTCAGGTTGCAACCAC+TGG | - | chr1.3:68451371-68451390 | MS.gene49179:CDS | 50.0% |
| ! | CAGAAGCCGCTTTACCAAGT+GGG | - | chr1.3:68454408-68454427 | MS.gene49179:intron | 50.0% |
| ! | CTGTATGTGGGCTGTTGGTT+TGG | - | chr1.3:68453052-68453071 | MS.gene49179:intron | 50.0% |
| ! | CTTCTCTGTATGTGGGCTGT+TGG | - | chr1.3:68453047-68453066 | MS.gene49179:intron | 50.0% |
| ! | CTTTCTTGCATTGATGGGGG+AGG | + | chr1.3:68451534-68451553 | None:intergenic | 50.0% |
| ! | GCAGGAAAAGGGTACAACAG+AGG | - | chr1.3:68455127-68455146 | MS.gene49179:CDS | 50.0% |
| ! | GTTGCCTAACTGGCCTGATT+TGG | - | chr1.3:68453476-68453495 | MS.gene49179:CDS | 50.0% |
| ! | TTGGTGGCCATGCAGGAAAA+GGG | - | chr1.3:68455116-68455135 | MS.gene49179:CDS | 50.0% |
| ! | TTTGGTGGCCATGCAGGAAA+AGG | - | chr1.3:68455115-68455134 | MS.gene49179:CDS | 50.0% |
| !! | ATGTGGGCTGTTGGTTTGGT+TGG | - | chr1.3:68453056-68453075 | MS.gene49179:intron | 50.0% |
| !! | CCTAATTTTGGTGGCCATGC+AGG | - | chr1.3:68455109-68455128 | MS.gene49179:CDS | 50.0% |
| !! | CTGGCCTGATTTGGAGAATC+GGG | - | chr1.3:68453485-68453504 | MS.gene49179:CDS | 50.0% |
| !! | GTTGGTTTGGTTGGGGGTTA+AGG | - | chr1.3:68453065-68453084 | MS.gene49179:intron | 50.0% |
| !! | TGTGGGCTGTTGGTTTGGTT+GGG | - | chr1.3:68453057-68453076 | MS.gene49179:intron | 50.0% |
| ACCACTAAGCCAGACTGCCT+TGG | + | chr1.3:68452681-68452700 | None:intergenic | 55.0% | |
| AGGGTCCTGAGGTTAGGAGT+GGG | - | chr1.3:68452143-68452162 | MS.gene49179:intron | 55.0% | |
| CAACCATAGCCTGGACAGGA+TGG | + | chr1.3:68453603-68453622 | None:intergenic | 55.0% | |
| CTCCTCTTGCAACCATAGCC+TGG | + | chr1.3:68453612-68453631 | None:intergenic | 55.0% | |
| CTTGCAACCATAGCCTGGAC+AGG | + | chr1.3:68453607-68453626 | None:intergenic | 55.0% | |
| GCTGTTCGAGAAGGTTCCGA+TGG | - | chr1.3:68453917-68453936 | MS.gene49179:CDS | 55.0% | |
| GGGGGCAAGTCTCTTTGTCT+CGG | - | chr1.3:68452455-68452474 | MS.gene49179:CDS | 55.0% | |
| GTCCAGGCTATGGTTGCAAG+AGG | - | chr1.3:68453607-68453626 | MS.gene49179:intron | 55.0% | |
| TAGGGTCCTGAGGTTAGGAG+TGG | - | chr1.3:68452142-68452161 | MS.gene49179:intron | 55.0% | |
| TCCCTCTTACGACCCACTTC+AGG | - | chr1.3:68451407-68451426 | MS.gene49179:CDS | 55.0% | |
| TGAAGTGGGTCGTAAGAGGG+AGG | + | chr1.3:68451408-68451427 | None:intergenic | 55.0% | |
| TGGTGCCTGCAGGTCGATAA+TGG | + | chr1.3:68454712-68454731 | None:intergenic | 55.0% | |
| TTAGGTGGCATCTGCCCACT+TGG | + | chr1.3:68454425-68454444 | None:intergenic | 55.0% | |
| ! | TCCAAGGCAGTCTGGCTTAG+TGG | - | chr1.3:68452677-68452696 | MS.gene49179:CDS | 55.0% |
| !! | GTGGGCTGTTGGTTTGGTTG+GGG | - | chr1.3:68453058-68453077 | MS.gene49179:intron | 55.0% |
| !! | TGAGGAGGTTCCGCTTTTGC+AGG | - | chr1.3:68453654-68453673 | MS.gene49179:intron | 55.0% |
| !! | TGGGCTGTTGGTTTGGTTGG+GGG | - | chr1.3:68453059-68453078 | MS.gene49179:intron | 55.0% |
| ACCTCTGCTCTGGTTGGCGT+GGG | + | chr1.3:68453881-68453900 | None:intergenic | 60.0% | |
| ATGGAGGAGAGCTCGCGTCA+CGG | - | chr1.3:68452911-68452930 | MS.gene49179:intron | 60.0% | |
| CAGCAGTTCCAACGCCACTC+TGG | + | chr1.3:68452222-68452241 | None:intergenic | 60.0% | |
| GGGTCCTGAGGTTAGGAGTG+GGG | - | chr1.3:68452144-68452163 | MS.gene49179:intron | 60.0% | |
| TACCTCTGCTCTGGTTGGCG+TGG | + | chr1.3:68453882-68453901 | None:intergenic | 60.0% | |
| CCTCTGCTCTGGTTGGCGTG+GGG | + | chr1.3:68453880-68453899 | None:intergenic | 65.0% | |
| CCCCACGCCAACCAGAGCAG+AGG | - | chr1.3:68453877-68453896 | MS.gene49179:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 68451371 | 68455748 | 68451371 | ID=MS.gene49179 |
| chr1.3 | mRNA | 68451371 | 68455748 | 68451371 | ID=MS.gene49179.t1;Parent=MS.gene49179 |
| chr1.3 | exon | 68455518 | 68455748 | 68455518 | ID=MS.gene49179.t1.exon1;Parent=MS.gene49179.t1 |
| chr1.3 | CDS | 68455518 | 68455748 | 68455518 | ID=cds.MS.gene49179.t1;Parent=MS.gene49179.t1 |
| chr1.3 | exon | 68455086 | 68455373 | 68455086 | ID=MS.gene49179.t1.exon2;Parent=MS.gene49179.t1 |
| chr1.3 | CDS | 68455086 | 68455373 | 68455086 | ID=cds.MS.gene49179.t1;Parent=MS.gene49179.t1 |
| chr1.3 | exon | 68454809 | 68454974 | 68454809 | ID=MS.gene49179.t1.exon3;Parent=MS.gene49179.t1 |
| chr1.3 | CDS | 68454809 | 68454974 | 68454809 | ID=cds.MS.gene49179.t1;Parent=MS.gene49179.t1 |
| chr1.3 | exon | 68454137 | 68454271 | 68454137 | ID=MS.gene49179.t1.exon4;Parent=MS.gene49179.t1 |
| chr1.3 | CDS | 68454137 | 68454271 | 68454137 | ID=cds.MS.gene49179.t1;Parent=MS.gene49179.t1 |
| chr1.3 | exon | 68453874 | 68453984 | 68453874 | ID=MS.gene49179.t1.exon5;Parent=MS.gene49179.t1 |
| chr1.3 | CDS | 68453874 | 68453984 | 68453874 | ID=cds.MS.gene49179.t1;Parent=MS.gene49179.t1 |
| chr1.3 | exon | 68453678 | 68453766 | 68453678 | ID=MS.gene49179.t1.exon6;Parent=MS.gene49179.t1 |
| chr1.3 | CDS | 68453678 | 68453766 | 68453678 | ID=cds.MS.gene49179.t1;Parent=MS.gene49179.t1 |
| chr1.3 | exon | 68453444 | 68453506 | 68453444 | ID=MS.gene49179.t1.exon7;Parent=MS.gene49179.t1 |
| chr1.3 | CDS | 68453444 | 68453506 | 68453444 | ID=cds.MS.gene49179.t1;Parent=MS.gene49179.t1 |
| chr1.3 | exon | 68453147 | 68453322 | 68453147 | ID=MS.gene49179.t1.exon8;Parent=MS.gene49179.t1 |
| chr1.3 | CDS | 68453147 | 68453322 | 68453147 | ID=cds.MS.gene49179.t1;Parent=MS.gene49179.t1 |
| chr1.3 | exon | 68452656 | 68452758 | 68452656 | ID=MS.gene49179.t1.exon9;Parent=MS.gene49179.t1 |
| chr1.3 | CDS | 68452656 | 68452758 | 68452656 | ID=cds.MS.gene49179.t1;Parent=MS.gene49179.t1 |
| chr1.3 | exon | 68452369 | 68452517 | 68452369 | ID=MS.gene49179.t1.exon10;Parent=MS.gene49179.t1 |
| chr1.3 | CDS | 68452369 | 68452517 | 68452369 | ID=cds.MS.gene49179.t1;Parent=MS.gene49179.t1 |
| chr1.3 | exon | 68451880 | 68451988 | 68451880 | ID=MS.gene49179.t1.exon11;Parent=MS.gene49179.t1 |
| chr1.3 | CDS | 68451880 | 68451988 | 68451880 | ID=cds.MS.gene49179.t1;Parent=MS.gene49179.t1 |
| chr1.3 | exon | 68451371 | 68451490 | 68451371 | ID=MS.gene49179.t1.exon12;Parent=MS.gene49179.t1 |
| chr1.3 | CDS | 68451371 | 68451490 | 68451371 | ID=cds.MS.gene49179.t1;Parent=MS.gene49179.t1 |
| Gene Sequence |
| Protein sequence |