Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene82397.t1 | RHN62058.1 | 99.2 | 500 | 4 | 0 | 1 | 500 | 1 | 500 | 9.90E-279 | 968.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene82397.t1 | Q42954 | 87.6 | 493 | 61 | 0 | 8 | 500 | 16 | 508 | 2.0e-248 | 859.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene82397.t1 | A0A396IBA8 | 99.2 | 500 | 4 | 0 | 1 | 500 | 1 | 500 | 7.1e-279 | 968.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049142 | MS.gene82397 | -0.80067 | 1.29E-48 | -1.69E-46 |
MS.gene049254 | MS.gene82397 | -0.809798 | 1.58E-50 | -1.69E-46 |
MS.gene049850 | MS.gene82397 | -0.816181 | 6.31E-52 | -1.69E-46 |
MS.gene050156 | MS.gene82397 | -0.809933 | 1.48E-50 | -1.69E-46 |
MS.gene050799 | MS.gene82397 | -0.824134 | 9.51E-54 | -1.69E-46 |
MS.gene051247 | MS.gene82397 | -0.830417 | 2.97E-55 | -1.69E-46 |
MS.gene051332 | MS.gene82397 | -0.80218 | 6.34E-49 | -1.69E-46 |
MS.gene051719 | MS.gene82397 | -0.801691 | 7.99E-49 | -1.69E-46 |
MS.gene051720 | MS.gene82397 | -0.811442 | 6.99E-51 | -1.69E-46 |
MS.gene051744 | MS.gene82397 | -0.828462 | 8.87E-55 | -1.69E-46 |
MS.gene051957 | MS.gene82397 | -0.800318 | 1.52E-48 | -1.69E-46 |
MS.gene052519 | MS.gene82397 | -0.827493 | 1.52E-54 | -1.69E-46 |
MS.gene052584 | MS.gene82397 | -0.807577 | 4.72E-50 | -1.69E-46 |
MS.gene052611 | MS.gene82397 | -0.811414 | 7.09E-51 | -1.69E-46 |
MS.gene052773 | MS.gene82397 | -0.807074 | 6.04E-50 | -1.69E-46 |
MS.gene052829 | MS.gene82397 | -0.813679 | 2.27E-51 | -1.69E-46 |
MS.gene052843 | MS.gene82397 | -0.820082 | 8.28E-53 | -1.69E-46 |
MS.gene052863 | MS.gene82397 | -0.815623 | 8.41E-52 | -1.69E-46 |
MS.gene053145 | MS.gene82397 | -0.824017 | 1.01E-53 | -1.69E-46 |
MS.gene053226 | MS.gene82397 | -0.832579 | 8.72E-56 | -1.69E-46 |
MS.gene053900 | MS.gene82397 | -0.861743 | 8.28E-64 | -1.69E-46 |
MS.gene053967 | MS.gene82397 | -0.818509 | 1.89E-52 | -1.69E-46 |
MS.gene054651 | MS.gene82397 | -0.834509 | 2.88E-56 | -1.69E-46 |
MS.gene054775 | MS.gene82397 | -0.826221 | 3.06E-54 | -1.69E-46 |
MS.gene054991 | MS.gene82397 | -0.808962 | 2.39E-50 | -1.69E-46 |
MS.gene055466 | MS.gene82397 | -0.809182 | 2.15E-50 | -1.69E-46 |
MS.gene055586 | MS.gene82397 | -0.813185 | 2.91E-51 | -1.69E-46 |
MS.gene055589 | MS.gene82397 | -0.801395 | 9.19E-49 | -1.69E-46 |
MS.gene055694 | MS.gene82397 | -0.811198 | 7.89E-51 | -1.69E-46 |
MS.gene055818 | MS.gene82397 | -0.839801 | 1.28E-57 | -1.69E-46 |
MS.gene056050 | MS.gene82397 | -0.859225 | 4.79E-63 | -1.69E-46 |
MS.gene056366 | MS.gene82397 | -0.835147 | 1.99E-56 | -1.69E-46 |
MS.gene056595 | MS.gene82397 | -0.811601 | 6.45E-51 | -1.69E-46 |
MS.gene057915 | MS.gene82397 | -0.81426 | 1.69E-51 | -1.69E-46 |
MS.gene058625 | MS.gene82397 | -0.843481 | 1.36E-58 | -1.69E-46 |
MS.gene058829 | MS.gene82397 | -0.823896 | 1.08E-53 | -1.69E-46 |
MS.gene059625 | MS.gene82397 | -0.813018 | 3.17E-51 | -1.69E-46 |
MS.gene060355 | MS.gene82397 | -0.805988 | 1.02E-49 | -1.69E-46 |
MS.gene060365 | MS.gene82397 | -0.812376 | 4.37E-51 | -1.69E-46 |
MS.gene060429 | MS.gene82397 | -0.814205 | 1.73E-51 | -1.69E-46 |
MS.gene060521 | MS.gene82397 | -0.808998 | 2.35E-50 | -1.69E-46 |
MS.gene060572 | MS.gene82397 | -0.813013 | 3.17E-51 | -1.69E-46 |
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene82397.t1 | MTR_7g100760 | 93.600 | 500 | 32 | 0 | 1 | 500 | 1 | 500 | 0.0 | 969 |
MS.gene82397.t1 | MTR_4g083330 | 93.400 | 500 | 6 | 2 | 1 | 500 | 1 | 473 | 0.0 | 943 |
MS.gene82397.t1 | MTR_4g083340 | 89.336 | 497 | 53 | 0 | 4 | 500 | 1 | 497 | 0.0 | 926 |
MS.gene82397.t1 | MTR_6g004020 | 78.819 | 491 | 104 | 0 | 10 | 500 | 20 | 510 | 0.0 | 818 |
MS.gene82397.t1 | MTR_7g103420 | 42.485 | 499 | 275 | 7 | 12 | 500 | 30 | 526 | 1.67e-128 | 384 |
MS.gene82397.t1 | MTR_1g091040 | 41.748 | 515 | 282 | 9 | 1 | 500 | 14 | 525 | 3.35e-127 | 380 |
MS.gene82397.t1 | MTR_7g103420 | 41.634 | 514 | 273 | 9 | 12 | 500 | 30 | 541 | 1.01e-125 | 377 |
MS.gene82397.t1 | MTR_1g061630 | 42.116 | 501 | 276 | 7 | 12 | 500 | 30 | 528 | 3.88e-124 | 373 |
MS.gene82397.t1 | MTR_1g061630 | 41.517 | 501 | 263 | 7 | 12 | 500 | 30 | 512 | 7.78e-122 | 367 |
MS.gene82397.t1 | MTR_7g103420 | 40.091 | 439 | 251 | 7 | 72 | 500 | 1 | 437 | 7.17e-100 | 307 |
MS.gene82397.t1 | MTR_1g091040 | 41.962 | 367 | 207 | 5 | 138 | 500 | 28 | 392 | 1.85e-91 | 284 |
MS.gene82397.t1 | MTR_5g014140 | 38.780 | 410 | 237 | 8 | 6 | 412 | 73 | 471 | 6.95e-89 | 283 |
MS.gene82397.t1 | MTR_6g034195 | 35.787 | 489 | 265 | 12 | 9 | 486 | 104 | 554 | 5.99e-84 | 270 |
MS.gene82397.t1 | MTR_1g099360 | 34.969 | 489 | 269 | 12 | 9 | 486 | 102 | 552 | 9.45e-83 | 267 |
MS.gene82397.t1 | MTR_5g014140 | 41.617 | 334 | 181 | 7 | 6 | 333 | 73 | 398 | 7.87e-79 | 253 |
MS.gene82397.t1 | MTR_1g076540 | 31.600 | 500 | 285 | 11 | 11 | 485 | 90 | 557 | 7.38e-71 | 236 |
MS.gene82397.t1 | MTR_1g105965 | 32.383 | 491 | 294 | 11 | 11 | 488 | 91 | 556 | 1.32e-68 | 230 |
MS.gene82397.t1 | MTR_1g105965 | 34.615 | 312 | 190 | 7 | 11 | 313 | 91 | 397 | 6.11e-51 | 179 |
MS.gene82397.t1 | MTR_1g105965 | 30.093 | 216 | 138 | 6 | 11 | 218 | 91 | 301 | 1.19e-21 | 95.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene82397.t1 | AT5G56350 | 89.271 | 494 | 53 | 0 | 7 | 500 | 5 | 498 | 0.0 | 908 |
MS.gene82397.t1 | AT4G26390 | 83.603 | 494 | 81 | 0 | 7 | 500 | 4 | 497 | 0.0 | 867 |
MS.gene82397.t1 | AT5G08570 | 79.022 | 491 | 103 | 0 | 10 | 500 | 20 | 510 | 0.0 | 821 |
MS.gene82397.t1 | AT5G08570 | 79.022 | 491 | 103 | 0 | 10 | 500 | 20 | 510 | 0.0 | 821 |
MS.gene82397.t1 | AT5G08570 | 79.022 | 491 | 103 | 0 | 10 | 500 | 20 | 510 | 0.0 | 821 |
MS.gene82397.t1 | AT5G63680 | 78.702 | 493 | 105 | 0 | 8 | 500 | 18 | 510 | 0.0 | 818 |
MS.gene82397.t1 | AT5G63680 | 78.702 | 493 | 105 | 0 | 8 | 500 | 18 | 510 | 0.0 | 818 |
MS.gene82397.t1 | AT5G63680 | 78.702 | 493 | 105 | 0 | 8 | 500 | 18 | 510 | 0.0 | 818 |
MS.gene82397.t1 | AT3G04050 | 73.790 | 496 | 126 | 3 | 9 | 500 | 15 | 510 | 0.0 | 758 |
MS.gene82397.t1 | AT3G25960 | 72.470 | 494 | 123 | 4 | 9 | 500 | 15 | 497 | 0.0 | 728 |
MS.gene82397.t1 | AT3G55650 | 71.169 | 496 | 139 | 3 | 9 | 500 | 15 | 510 | 0.0 | 726 |
MS.gene82397.t1 | AT3G55810 | 67.944 | 496 | 137 | 4 | 9 | 500 | 15 | 492 | 0.0 | 673 |
MS.gene82397.t1 | AT2G36580 | 43.487 | 499 | 270 | 7 | 12 | 500 | 30 | 526 | 2.93e-130 | 389 |
MS.gene82397.t1 | AT3G52990 | 43.287 | 499 | 271 | 7 | 12 | 500 | 30 | 526 | 2.72e-129 | 386 |
MS.gene82397.t1 | AT3G52990 | 42.526 | 475 | 261 | 7 | 36 | 500 | 1 | 473 | 3.63e-120 | 361 |
MS.gene82397.t1 | AT5G52920 | 36.179 | 492 | 272 | 13 | 11 | 495 | 111 | 567 | 1.38e-84 | 272 |
MS.gene82397.t1 | AT1G32440 | 39.320 | 412 | 229 | 10 | 7 | 412 | 96 | 492 | 4.09e-81 | 263 |
MS.gene82397.t1 | AT3G22960 | 31.717 | 495 | 289 | 12 | 11 | 485 | 118 | 583 | 3.16e-70 | 235 |
MS.gene82397.t1 | AT3G49160 | 31.618 | 272 | 159 | 9 | 73 | 322 | 325 | 591 | 1.53e-21 | 98.6 |
MS.gene82397.t1 | AT3G49160 | 31.618 | 272 | 159 | 9 | 73 | 322 | 413 | 679 | 1.73e-21 | 98.6 |
Find 122 sgRNAs with CRISPR-Local
Find 162 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGCAAACTCTGATGCATTTA+TGG | 0.128456 | 4.2:+26199491 | MS.gene82397:CDS |
CAAAGTTTGCAACCCCTTCT+TGG | 0.251729 | 4.2:-26199458 | None:intergenic |
CGTGCAAACGATCTTAGTTT+TGG | 0.261618 | 4.2:-26197534 | None:intergenic |
AGGAGGGACTACTGCAAAAT+TGG | 0.314986 | 4.2:+26199938 | MS.gene82397:CDS |
GTACAAGTTCGAAAACTTCT+AGG | 0.320879 | 4.2:+26199115 | MS.gene82397:CDS |
TGTGAGAACTCTGCTGTTCT+AGG | 0.329692 | 4.2:+26198947 | MS.gene82397:CDS |
GCAGAAGCAGCACTTAATAT+TGG | 0.330688 | 4.2:-26200089 | None:intergenic |
TTACCTTGTTTCAGTTGAAT+AGG | 0.334625 | 4.2:-26198749 | None:intergenic |
TGATGTTGCGAATGCAGTTC+TGG | 0.344149 | 4.2:+26199677 | MS.gene82397:CDS |
GAAAGGGACTCTGCGTTAAC+GGG | 0.361244 | 4.2:+26200174 | MS.gene82397:CDS |
CTTATCGTGTGACAAAGAAT+TGG | 0.361638 | 4.2:+26198907 | MS.gene82397:CDS |
TTGTATTCTCATCACCCTTT+AGG | 0.370256 | 4.2:-26198799 | None:intergenic |
CGATAAGACTGTAAATGATA+TGG | 0.371207 | 4.2:-26198891 | None:intergenic |
AGCTTCAGCTCTGGTTGGCC+GGG | 0.390347 | 4.2:-26199652 | None:intergenic |
TAGCTTCAGCTCTGGTTGGC+CGG | 0.391145 | 4.2:-26199653 | None:intergenic |
CAAGGAAGATATCATGGCTT+GGG | 0.397205 | 4.2:+26199033 | MS.gene82397:CDS |
CCTTTCCCTTGGCACATTGA+AGG | 0.403085 | 4.2:-26200157 | None:intergenic |
GCTGAGAGCACCATTGACTA+TGG | 0.403578 | 4.2:+26199792 | MS.gene82397:CDS |
GGAAAGGGACTCTGCGTTAA+CGG | 0.404260 | 4.2:+26200173 | MS.gene82397:CDS |
CGCCGTCATGCTCGATACTA+AGG | 0.406356 | 4.2:+26197712 | MS.gene82397:CDS |
TCAACTGACTATAGCCTAAA+GGG | 0.420476 | 4.2:+26198785 | MS.gene82397:CDS |
CATGACGGCGCAGAGAATTC+CGG | 0.420747 | 4.2:-26197699 | None:intergenic |
TTGTTTCAGTTGAATAGGTT+TGG | 0.425807 | 4.2:-26198744 | None:intergenic |
TGCTAGAGCAGCTCTCATAT+TGG | 0.437951 | 4.2:+26199905 | MS.gene82397:CDS |
AGATGTATTCAAAAGGATAA+TGG | 0.438677 | 4.2:+26199815 | MS.gene82397:CDS |
GGAACGACAACAGAAAGAAT+TGG | 0.441249 | 4.2:-26199984 | None:intergenic |
GCACGCTGGGACCCGCATCT+AGG | 0.445382 | 4.2:+26197552 | MS.gene82397:CDS |
TTATCGTGTGACAAAGAATT+GGG | 0.446712 | 4.2:+26198908 | MS.gene82397:CDS |
ACAGAAAGAATTGGCGTGCC+TGG | 0.449963 | 4.2:-26199975 | None:intergenic |
GCGCTTTCATTTGTTCGAAA+AGG | 0.450686 | 4.2:+26199082 | MS.gene82397:CDS |
CAAAATTGGTGGCTAAATAC+AGG | 0.450918 | 4.2:+26199952 | MS.gene82397:CDS |
TGTTCGAAAAGGTTCTGATC+TGG | 0.452582 | 4.2:+26199093 | MS.gene82397:CDS |
TCCAATGGGCTCATGGGTAC+TGG | 0.457116 | 4.2:-26199846 | None:intergenic |
TAACGACTGATACCTTTGAT+TGG | 0.457143 | 4.2:+26200012 | MS.gene82397:CDS |
AGAAATCCAGTTCGAATCTC+AGG | 0.458723 | 4.2:-26198713 | None:intergenic |
ACTAAGATCGTTTGCACGCT+GGG | 0.459837 | 4.2:+26197539 | MS.gene82397:CDS |
GAGAGCTGCTCTAGCAGAGT+TGG | 0.462449 | 4.2:-26199898 | None:intergenic |
CTTTCCCTTGGCACATTGAA+GGG | 0.463400 | 4.2:-26200156 | None:intergenic |
ATTGTACGAACAGCAAGTTC+TGG | 0.463793 | 4.2:-26199750 | None:intergenic |
GAATACATCTCCATAGTCAA+TGG | 0.466000 | 4.2:-26199802 | None:intergenic |
AACGCAGAGTCCCTTTCCCT+TGG | 0.468309 | 4.2:-26200168 | None:intergenic |
CGCAAAAGCTTCTCGACCAT+GGG | 0.471680 | 4.2:-26197581 | None:intergenic |
TAGACTCTCCAATGGGCTCA+TGG | 0.478114 | 4.2:-26199853 | None:intergenic |
TTGGCTCATGATGTGAAGCC+TGG | 0.480964 | 4.2:+26198842 | MS.gene82397:CDS |
CAATTGGAATTTCCATTCCA+AGG | 0.480988 | 4.2:-26199527 | None:intergenic |
GCTAGATTCAACTTCTCTCA+TGG | 0.485672 | 4.2:+26197620 | MS.gene82397:CDS |
GTGTGACAAAGAATTGGGTT+TGG | 0.488491 | 4.2:+26198913 | MS.gene82397:CDS |
GTGCAATATCCAAGGAAAAC+CGG | 0.489545 | 4.2:+26199587 | MS.gene82397:CDS |
AGAAAGAATGTTAATCTGCC+TGG | 0.492316 | 4.2:+26198974 | MS.gene82397:CDS |
AATATCAAGCTATGTCTAGC+AGG | 0.493341 | 4.2:-26200053 | None:intergenic |
TAGGGGCCTGAGATTCGAAC+TGG | 0.499972 | 4.2:+26198707 | MS.gene82397:intron |
CTTCAATGTGCCAAGGGAAA+GGG | 0.500302 | 4.2:+26200158 | MS.gene82397:CDS |
TTCAACTGACTATAGCCTAA+AGG | 0.500418 | 4.2:+26198784 | MS.gene82397:CDS |
CGTTAACGGGGATTCTGTTG+TGG | 0.503390 | 4.2:+26200187 | MS.gene82397:CDS |
GCTTCAGCTCTGGTTGGCCG+GGG | 0.507929 | 4.2:-26199651 | None:intergenic |
CGTTACTGCGACTCAGATGT+TGG | 0.507988 | 4.2:+26199611 | MS.gene82397:CDS |
ATCTGAGTCGCAGTAACGAC+CGG | 0.509493 | 4.2:-26199606 | None:intergenic |
GAAAGACAAGGAAGATATCA+TGG | 0.513280 | 4.2:+26199027 | MS.gene82397:CDS |
TGGTTCTCATGAGTATCATC+AGG | 0.514740 | 4.2:+26197640 | MS.gene82397:CDS |
CCTTCAATGTGCCAAGGGAA+AGG | 0.523286 | 4.2:+26200157 | MS.gene82397:CDS |
ACAGACTGTGTCATGCTTAG+TGG | 0.525623 | 4.2:+26199705 | MS.gene82397:CDS |
ACAAGGAAGATATCATGGCT+TGG | 0.526189 | 4.2:+26199032 | MS.gene82397:CDS |
AAGGTATCAGTCGTTAGCTC+AGG | 0.530961 | 4.2:-26200005 | None:intergenic |
CGCATCTAGGTCTATTCCCA+TGG | 0.531643 | 4.2:+26197565 | MS.gene82397:CDS |
TGATAATCTTAGAGCTGCCA+TGG | 0.531806 | 4.2:+26197670 | MS.gene82397:CDS |
AGTGTCATACTCTGCGCAGA+TGG | 0.532331 | 4.2:+26198866 | MS.gene82397:CDS |
ACTATGGAGATGTATTCAAA+AGG | 0.538144 | 4.2:+26199808 | MS.gene82397:CDS |
GGAAGATCCACTACGACTCC+AGG | 0.538876 | 4.2:-26198992 | None:intergenic |
CTTGTCTTTCTCAGTCAAAG+TGG | 0.540820 | 4.2:-26199014 | None:intergenic |
AACTAAGATCGTTTGCACGC+TGG | 0.542989 | 4.2:+26197538 | MS.gene82397:CDS |
TCGCAAAAGCTTCTCGACCA+TGG | 0.546576 | 4.2:-26197582 | None:intergenic |
CTTAGTGGTGAAACTGCTGC+TGG | 0.547208 | 4.2:+26199720 | MS.gene82397:CDS |
AACATCAGTAGCTTCAGCTC+TGG | 0.547477 | 4.2:-26199661 | None:intergenic |
GGCAGGTTGAAAACCAAGAA+GGG | 0.548016 | 4.2:+26199445 | MS.gene82397:intron |
GAACATTCTTCTCATGTCAA+AGG | 0.556045 | 4.2:+26199150 | MS.gene82397:CDS |
AGACTCTCCAATGGGCTCAT+GGG | 0.558290 | 4.2:-26199852 | None:intergenic |
AGGGACTACTGCAAAATTGG+TGG | 0.560616 | 4.2:+26199941 | MS.gene82397:CDS |
CTCATATTGGTTCTAACTAG+AGG | 0.560702 | 4.2:+26199918 | MS.gene82397:CDS |
TTAATATTGGAATCAATCCT+CGG | 0.562918 | 4.2:-26200076 | None:intergenic |
AGAGCTGCCATGGAGAATAC+CGG | 0.568658 | 4.2:+26197680 | MS.gene82397:CDS |
ACCAGTACCCATGAGCCCAT+TGG | 0.569139 | 4.2:+26199845 | MS.gene82397:CDS |
TTGTCTTTCTCAGTCAAAGT+GGG | 0.570627 | 4.2:-26199013 | None:intergenic |
TTTAATGGGAGATCATTTCA+CGG | 0.575483 | 4.2:-26200252 | None:intergenic |
GGCACGTGGTGACCTTGGAA+TGG | 0.579482 | 4.2:+26199515 | MS.gene82397:CDS |
AAGAAGCTAGACTCTCCAAT+GGG | 0.579536 | 4.2:-26199860 | None:intergenic |
TTGGTGGCTAAATACAGGCC+AGG | 0.581932 | 4.2:+26199957 | MS.gene82397:CDS |
TGGCAGGTTGAAAACCAAGA+AGG | 0.582341 | 4.2:+26199444 | MS.gene82397:intron |
ATATCAAGCTATGTCTAGCA+GGG | 0.582962 | 4.2:-26200052 | None:intergenic |
TCAGTAGCTTCAGCTCTGGT+TGG | 0.584103 | 4.2:-26199657 | None:intergenic |
TGTTGTGGTTCTGCATCGCG+TGG | 0.586595 | 4.2:+26200202 | MS.gene82397:CDS |
GATTCGAACTGGATTTCTCA+AGG | 0.588567 | 4.2:+26198718 | MS.gene82397:CDS |
ATTTGCCCTTCAATGTGCCA+AGG | 0.591498 | 4.2:+26200151 | MS.gene82397:CDS |
TAAATGCATCAGAGTTTGCA+AGG | 0.592927 | 4.2:-26199488 | None:intergenic |
ATGGTGGCACGTGGTGACCT+TGG | 0.597261 | 4.2:+26199510 | MS.gene82397:CDS |
ATTTATAAGTGCAATATCCA+AGG | 0.598187 | 4.2:+26199579 | MS.gene82397:CDS |
AGAACTTGCTGTTCGTACAA+TGG | 0.602563 | 4.2:+26199752 | MS.gene82397:CDS |
AGACATAGCTTGATATTCCG+AGG | 0.602907 | 4.2:+26200059 | MS.gene82397:CDS |
GCGCAGAGTATGACACTCCC+AGG | 0.606193 | 4.2:-26198860 | None:intergenic |
ATATTGGTTCTAACTAGAGG+AGG | 0.607238 | 4.2:+26199921 | MS.gene82397:CDS |
CACTTTGACTGAGAAAGACA+AGG | 0.607462 | 4.2:+26199015 | MS.gene82397:CDS |
TGAGAAGAATGTTCTTAGCA+TGG | 0.609210 | 4.2:-26199141 | None:intergenic |
TTTGCCCTTCAATGTGCCAA+GGG | 0.609763 | 4.2:+26200152 | MS.gene82397:CDS |
GTTGCGAATGCAGTTCTGGA+TGG | 0.610844 | 4.2:+26199681 | MS.gene82397:CDS |
GAGAATTCCGGTATTCTCCA+TGG | 0.611587 | 4.2:-26197687 | None:intergenic |
ATCACTGCATGACCAATCAA+AGG | 0.619997 | 4.2:-26200024 | None:intergenic |
GAAGAAGCTAGACTCTCCAA+TGG | 0.622268 | 4.2:-26199861 | None:intergenic |
TGGCTCATGATGTGAAGCCT+GGG | 0.622471 | 4.2:+26198843 | MS.gene82397:CDS |
TAATCTGCCTGGAGTCGTAG+TGG | 0.623976 | 4.2:+26198985 | MS.gene82397:CDS |
ATGGGAATAGACCTAGATGC+GGG | 0.628393 | 4.2:-26197563 | None:intergenic |
TATTGGTTCTAACTAGAGGA+GGG | 0.629589 | 4.2:+26199922 | MS.gene82397:CDS |
AAGGAAGATATCATGGCTTG+GGG | 0.639801 | 4.2:+26199034 | MS.gene82397:CDS |
AGTCAATGATCAAATCTCCC+CGG | 0.646746 | 4.2:+26199634 | MS.gene82397:CDS |
AAAGGGACTCTGCGTTAACG+GGG | 0.647503 | 4.2:+26200175 | MS.gene82397:CDS |
GTTGTGGTTCTGCATCGCGT+GGG | 0.653541 | 4.2:+26200203 | MS.gene82397:CDS |
GCAGGTTGAAAACCAAGAAG+GGG | 0.675723 | 4.2:+26199446 | MS.gene82397:intron |
TACCTTAGTATCGAGCATGA+CGG | 0.683613 | 4.2:-26197714 | None:intergenic |
AAACCTATTCAACTGAAACA+AGG | 0.687652 | 4.2:+26198746 | MS.gene82397:CDS |
CATGGGAATAGACCTAGATG+CGG | 0.689751 | 4.2:-26197564 | None:intergenic |
AAACTCTGATGCATTTATGG+TGG | 0.705208 | 4.2:+26199494 | MS.gene82397:CDS |
TATCAAGCTATGTCTAGCAG+GGG | 0.708675 | 4.2:-26200051 | None:intergenic |
GATGCATTTATGGTGGCACG+TGG | 0.742236 | 4.2:+26199501 | MS.gene82397:CDS |
GAACAGCAGAGTTCTCACAG+CGG | 0.862341 | 4.2:-26198943 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAATAAAAAAAATAAAAAA+AGG | - | chr4.2:26197745-26197764 | None:intergenic | 0.0% |
!! | TACTTGATTCTTAATATTTA+TGG | + | chr4.2:26198533-26198552 | MS.gene82397:intron | 15.0% |
!!! | CTGAAAATAATTTTTGTATT+TGG | + | chr4.2:26198209-26198228 | MS.gene82397:intron | 15.0% |
!! | AATTCTTATCCATACATATA+AGG | - | chr4.2:26197972-26197991 | None:intergenic | 20.0% |
!! | ATTAAGAATCAAGTAAAAAC+CGG | - | chr4.2:26198528-26198547 | None:intergenic | 20.0% |
!! | TAAAAGAACTATAGTCTATT+TGG | - | chr4.2:26198465-26198484 | None:intergenic | 20.0% |
! | AAGAGATAGAAAAAATCAGT+AGG | - | chr4.2:26199362-26199381 | None:intergenic | 25.0% |
! | AGATGTATTCAAAAGGATAA+TGG | + | chr4.2:26199815-26199834 | MS.gene82397:CDS | 25.0% |
! | ATTTATAAGTGCAATATCCA+AGG | + | chr4.2:26199579-26199598 | MS.gene82397:CDS | 25.0% |
! | TGTTAGATTAGGTTATGTTT+GGG | + | chr4.2:26198046-26198065 | MS.gene82397:intron | 25.0% |
! | TTAATATTGGAATCAATCCT+CGG | - | chr4.2:26200079-26200098 | None:intergenic | 25.0% |
! | TTACAATACTCACCAAAATA+AGG | - | chr4.2:26198566-26198585 | None:intergenic | 25.0% |
!! | GCAATCATGTCAATTTTATT+GGG | - | chr4.2:26199064-26199083 | None:intergenic | 25.0% |
!! | TTTTATAAGATGTCTTAGAG+AGG | + | chr4.2:26198173-26198192 | MS.gene82397:intron | 25.0% |
!!! | TATGGTTTAGAACCTTATTT+TGG | + | chr4.2:26198551-26198570 | MS.gene82397:intron | 25.0% |
!!! | TATTAAGAGAGTTTTAGTTG+CGG | - | chr4.2:26198611-26198630 | None:intergenic | 25.0% |
!!! | TGATTTTGACCTTATATGTA+TGG | + | chr4.2:26197960-26197979 | MS.gene82397:intron | 25.0% |
AAACCTATTCAACTGAAACA+AGG | + | chr4.2:26198746-26198765 | MS.gene82397:CDS | 30.0% | |
ACAGTTCAAACATGTATTGA+CGG | - | chr4.2:26198029-26198048 | None:intergenic | 30.0% | |
ACTATGGAGATGTATTCAAA+AGG | + | chr4.2:26199808-26199827 | MS.gene82397:CDS | 30.0% | |
CATGTTTGAACTGTTAGATT+AGG | + | chr4.2:26198035-26198054 | MS.gene82397:intron | 30.0% | |
CGATAAGACTGTAAATGATA+TGG | - | chr4.2:26198894-26198913 | None:intergenic | 30.0% | |
CGGTAAAAGTCACTATTAAT+CGG | - | chr4.2:26198009-26198028 | None:intergenic | 30.0% | |
CTGTTAGATTAGGTTATGTT+TGG | + | chr4.2:26198045-26198064 | MS.gene82397:intron | 30.0% | |
TGTTTCATGCAAGTTATTAG+CGG | + | chr4.2:26198149-26198168 | MS.gene82397:intron | 30.0% | |
TTATCGTGTGACAAAGAATT+GGG | + | chr4.2:26198908-26198927 | MS.gene82397:CDS | 30.0% | |
TTGTTTCAGTTGAATAGGTT+TGG | - | chr4.2:26198747-26198766 | None:intergenic | 30.0% | |
! | CGCAATCATGTCAATTTTAT+TGG | - | chr4.2:26199065-26199084 | None:intergenic | 30.0% |
! | GCGAGAAATATTTTCTCAAT+TGG | - | chr4.2:26199546-26199565 | None:intergenic | 30.0% |
! | TTACCTTGTTTCAGTTGAAT+AGG | - | chr4.2:26198752-26198771 | None:intergenic | 30.0% |
!! | ATAAAAGCATCTTCAATGTC+CGG | + | chr4.2:26198506-26198525 | MS.gene82397:intron | 30.0% |
!! | CAAGATTTTGATGATTGATG+CGG | - | chr4.2:26200231-26200250 | None:intergenic | 30.0% |
AAACTCTGATGCATTTATGG+TGG | + | chr4.2:26199494-26199513 | MS.gene82397:CDS | 35.0% | |
AAGATGTCTTAGAGAGGTTA+TGG | + | chr4.2:26198179-26198198 | MS.gene82397:intron | 35.0% | |
AATATCAAGCTATGTCTAGC+AGG | - | chr4.2:26200056-26200075 | None:intergenic | 35.0% | |
AGAAAGAATGTTAATCTGCC+TGG | + | chr4.2:26198974-26198993 | MS.gene82397:CDS | 35.0% | |
ATATCAAGCTATGTCTAGCA+GGG | - | chr4.2:26200055-26200074 | None:intergenic | 35.0% | |
ATGAAGCAACTTGAAAATGC+TGG | - | chr4.2:26198642-26198661 | None:intergenic | 35.0% | |
CAATTGGAATTTCCATTCCA+AGG | - | chr4.2:26199530-26199549 | None:intergenic | 35.0% | |
CTTATCGTGTGACAAAGAAT+TGG | + | chr4.2:26198907-26198926 | MS.gene82397:CDS | 35.0% | |
GAAAGACAAGGAAGATATCA+TGG | + | chr4.2:26199027-26199046 | MS.gene82397:CDS | 35.0% | |
GAACATTCTTCTCATGTCAA+AGG | + | chr4.2:26199150-26199169 | MS.gene82397:CDS | 35.0% | |
GAATACATCTCCATAGTCAA+TGG | - | chr4.2:26199805-26199824 | None:intergenic | 35.0% | |
GTACAAGTTCGAAAACTTCT+AGG | + | chr4.2:26199115-26199134 | MS.gene82397:CDS | 35.0% | |
TAAATGCATCAGAGTTTGCA+AGG | - | chr4.2:26199491-26199510 | None:intergenic | 35.0% | |
TAACGACTGATACCTTTGAT+TGG | + | chr4.2:26200012-26200031 | MS.gene82397:CDS | 35.0% | |
TCAACTGACTATAGCCTAAA+GGG | + | chr4.2:26198785-26198804 | MS.gene82397:CDS | 35.0% | |
TCCAATAACACACATTAACG+TGG | - | chr4.2:26199288-26199307 | None:intergenic | 35.0% | |
TCCACGTTAATGTGTGTTAT+TGG | + | chr4.2:26199284-26199303 | MS.gene82397:intron | 35.0% | |
TGAGAAGAATGTTCTTAGCA+TGG | - | chr4.2:26199144-26199163 | None:intergenic | 35.0% | |
TGCAAACTCTGATGCATTTA+TGG | + | chr4.2:26199491-26199510 | MS.gene82397:CDS | 35.0% | |
TTACATTGCTCATTGCTGTA+GGG | + | chr4.2:26198689-26198708 | MS.gene82397:intron | 35.0% | |
TTCAACTGACTATAGCCTAA+AGG | + | chr4.2:26198784-26198803 | MS.gene82397:CDS | 35.0% | |
TTGTATTCTCATCACCCTTT+AGG | - | chr4.2:26198802-26198821 | None:intergenic | 35.0% | |
TTGTCTTTCTCAGTCAAAGT+GGG | - | chr4.2:26199016-26199035 | None:intergenic | 35.0% | |
! | CAAAATTGGTGGCTAAATAC+AGG | + | chr4.2:26199952-26199971 | MS.gene82397:CDS | 35.0% |
! | TGGTGAGTATTGTAATTCGA+GGG | + | chr4.2:26198571-26198590 | MS.gene82397:intron | 35.0% |
! | TTGGTGAGTATTGTAATTCG+AGG | + | chr4.2:26198570-26198589 | MS.gene82397:intron | 35.0% |
!! | ATATTGGTTCTAACTAGAGG+AGG | + | chr4.2:26199921-26199940 | MS.gene82397:CDS | 35.0% |
!! | CTCATATTGGTTCTAACTAG+AGG | + | chr4.2:26199918-26199937 | MS.gene82397:CDS | 35.0% |
!! | GTGCAAACGATCTTAGTTTT+GGG | - | chr4.2:26197536-26197555 | None:intergenic | 35.0% |
!! | TATTGGTTCTAACTAGAGGA+GGG | + | chr4.2:26199922-26199941 | MS.gene82397:CDS | 35.0% |
AACTTGCAAATGTATGTGGC+AGG | + | chr4.2:26199428-26199447 | MS.gene82397:intron | 40.0% | |
AAGAAGCTAGACTCTCCAAT+GGG | - | chr4.2:26199863-26199882 | None:intergenic | 40.0% | |
AAGGAAGATATCATGGCTTG+GGG | + | chr4.2:26199034-26199053 | MS.gene82397:CDS | 40.0% | |
ACAAGGAAGATATCATGGCT+TGG | + | chr4.2:26199032-26199051 | MS.gene82397:CDS | 40.0% | |
AGAAATCCAGTTCGAATCTC+AGG | - | chr4.2:26198716-26198735 | None:intergenic | 40.0% | |
AGACATAGCTTGATATTCCG+AGG | + | chr4.2:26200059-26200078 | MS.gene82397:CDS | 40.0% | |
AGTCAATGATCAAATCTCCC+CGG | + | chr4.2:26199634-26199653 | MS.gene82397:CDS | 40.0% | |
ATCACTGCATGACCAATCAA+AGG | - | chr4.2:26200027-26200046 | None:intergenic | 40.0% | |
ATTGTACGAACAGCAAGTTC+TGG | - | chr4.2:26199753-26199772 | None:intergenic | 40.0% | |
CAAGGAAGATATCATGGCTT+GGG | + | chr4.2:26199033-26199052 | MS.gene82397:CDS | 40.0% | |
CACTTTGACTGAGAAAGACA+AGG | + | chr4.2:26199015-26199034 | MS.gene82397:CDS | 40.0% | |
CATACATTTGCAAGTTGCAG+AGG | - | chr4.2:26199424-26199443 | None:intergenic | 40.0% | |
CTCCATGAGCTACAAAAAGT+TGG | + | chr4.2:26198823-26198842 | MS.gene82397:CDS | 40.0% | |
CTGCAACTTGCAAATGTATG+TGG | + | chr4.2:26199424-26199443 | MS.gene82397:intron | 40.0% | |
CTTACATTGCTCATTGCTGT+AGG | + | chr4.2:26198688-26198707 | MS.gene82397:intron | 40.0% | |
CTTGTCTTTCTCAGTCAAAG+TGG | - | chr4.2:26199017-26199036 | None:intergenic | 40.0% | |
GATTCGAACTGGATTTCTCA+AGG | + | chr4.2:26198718-26198737 | MS.gene82397:CDS | 40.0% | |
GCAGAAGCAGCACTTAATAT+TGG | - | chr4.2:26200092-26200111 | None:intergenic | 40.0% | |
GCGCTTTCATTTGTTCGAAA+AGG | + | chr4.2:26199082-26199101 | MS.gene82397:CDS | 40.0% | |
GCTAGATTCAACTTCTCTCA+TGG | + | chr4.2:26197620-26197639 | MS.gene82397:CDS | 40.0% | |
GGAACGACAACAGAAAGAAT+TGG | - | chr4.2:26199987-26200006 | None:intergenic | 40.0% | |
GTGCAATATCCAAGGAAAAC+CGG | + | chr4.2:26199587-26199606 | MS.gene82397:CDS | 40.0% | |
GTGTGACAAAGAATTGGGTT+TGG | + | chr4.2:26198913-26198932 | MS.gene82397:CDS | 40.0% | |
TACATTGCTCATTGCTGTAG+GGG | + | chr4.2:26198690-26198709 | MS.gene82397:intron | 40.0% | |
TATCAAGCTATGTCTAGCAG+GGG | - | chr4.2:26200054-26200073 | None:intergenic | 40.0% | |
TGATAATCTTAGAGCTGCCA+TGG | + | chr4.2:26197670-26197689 | MS.gene82397:CDS | 40.0% | |
TGGTTCTCATGAGTATCATC+AGG | + | chr4.2:26197640-26197659 | MS.gene82397:CDS | 40.0% | |
! | AGCCAACTTTTTGTAGCTCA+TGG | - | chr4.2:26198828-26198847 | None:intergenic | 40.0% |
! | CGTGCAAACGATCTTAGTTT+TGG | - | chr4.2:26197537-26197556 | None:intergenic | 40.0% |
! | TACCTTAGTATCGAGCATGA+CGG | - | chr4.2:26197717-26197736 | None:intergenic | 40.0% |
! | TGTTCGAAAAGGTTCTGATC+TGG | + | chr4.2:26199093-26199112 | MS.gene82397:CDS | 40.0% |
!! | AGAACTTGCTGTTCGTACAA+TGG | + | chr4.2:26199752-26199771 | MS.gene82397:CDS | 40.0% |
AACATCAGTAGCTTCAGCTC+TGG | - | chr4.2:26199664-26199683 | None:intergenic | 45.0% | |
AACTAAGATCGTTTGCACGC+TGG | + | chr4.2:26197538-26197557 | MS.gene82397:CDS | 45.0% | |
ACAGACTGTGTCATGCTTAG+TGG | + | chr4.2:26199705-26199724 | MS.gene82397:CDS | 45.0% | |
ACTAAGATCGTTTGCACGCT+GGG | + | chr4.2:26197539-26197558 | MS.gene82397:CDS | 45.0% | |
AGGAGGGACTACTGCAAAAT+TGG | + | chr4.2:26199938-26199957 | MS.gene82397:CDS | 45.0% | |
AGGGACTACTGCAAAATTGG+TGG | + | chr4.2:26199941-26199960 | MS.gene82397:CDS | 45.0% | |
ATGGGAATAGACCTAGATGC+GGG | - | chr4.2:26197566-26197585 | None:intergenic | 45.0% | |
ATTTGCCCTTCAATGTGCCA+AGG | + | chr4.2:26200151-26200170 | MS.gene82397:CDS | 45.0% | |
CAAAGTTTGCAACCCCTTCT+TGG | - | chr4.2:26199461-26199480 | None:intergenic | 45.0% | |
CATGGGAATAGACCTAGATG+CGG | - | chr4.2:26197567-26197586 | None:intergenic | 45.0% | |
CTTCAATGTGCCAAGGGAAA+GGG | + | chr4.2:26200158-26200177 | MS.gene82397:CDS | 45.0% | |
CTTTCCCTTGGCACATTGAA+GGG | - | chr4.2:26200159-26200178 | None:intergenic | 45.0% | |
GAAGAAGCTAGACTCTCCAA+TGG | - | chr4.2:26199864-26199883 | None:intergenic | 45.0% | |
GAGAATTCCGGTATTCTCCA+TGG | - | chr4.2:26197690-26197709 | None:intergenic | 45.0% | |
TGATGTTGCGAATGCAGTTC+TGG | + | chr4.2:26199677-26199696 | MS.gene82397:CDS | 45.0% | |
TGCTAGAGCAGCTCTCATAT+TGG | + | chr4.2:26199905-26199924 | MS.gene82397:CDS | 45.0% | |
TGTGAGAACTCTGCTGTTCT+AGG | + | chr4.2:26198947-26198966 | MS.gene82397:CDS | 45.0% | |
TTTGCCCTTCAATGTGCCAA+GGG | + | chr4.2:26200152-26200171 | MS.gene82397:CDS | 45.0% | |
! | AAGGTATCAGTCGTTAGCTC+AGG | - | chr4.2:26200008-26200027 | None:intergenic | 45.0% |
! | GCAGGTTGAAAACCAAGAAG+GGG | + | chr4.2:26199446-26199465 | MS.gene82397:intron | 45.0% |
! | GGCAGGTTGAAAACCAAGAA+GGG | + | chr4.2:26199445-26199464 | MS.gene82397:intron | 45.0% |
! | TGGCAGGTTGAAAACCAAGA+AGG | + | chr4.2:26199444-26199463 | MS.gene82397:intron | 45.0% |
!!! | ATTTTTTATTATTTTTTTCA+TGG | + | chr4.2:26199188-26199207 | MS.gene82397:intron | 5.0% |
AAAGGGACTCTGCGTTAACG+GGG | + | chr4.2:26200175-26200194 | MS.gene82397:CDS | 50.0% | |
ACAGAAAGAATTGGCGTGCC+TGG | - | chr4.2:26199978-26199997 | None:intergenic | 50.0% | |
AGAGCTGCCATGGAGAATAC+CGG | + | chr4.2:26197680-26197699 | MS.gene82397:CDS | 50.0% | |
AGTGTCATACTCTGCGCAGA+TGG | + | chr4.2:26198866-26198885 | MS.gene82397:CDS | 50.0% | |
ATCTGAGTCGCAGTAACGAC+CGG | - | chr4.2:26199609-26199628 | None:intergenic | 50.0% | |
CCTTCAATGTGCCAAGGGAA+AGG | + | chr4.2:26200157-26200176 | MS.gene82397:CDS | 50.0% | |
CCTTTCCCTTGGCACATTGA+AGG | - | chr4.2:26200160-26200179 | None:intergenic | 50.0% | |
CGCAAAAGCTTCTCGACCAT+GGG | - | chr4.2:26197584-26197603 | None:intergenic | 50.0% | |
CGCATCTAGGTCTATTCCCA+TGG | + | chr4.2:26197565-26197584 | MS.gene82397:CDS | 50.0% | |
CGTTAACGGGGATTCTGTTG+TGG | + | chr4.2:26200187-26200206 | MS.gene82397:CDS | 50.0% | |
CGTTACTGCGACTCAGATGT+TGG | + | chr4.2:26199611-26199630 | MS.gene82397:CDS | 50.0% | |
CTTAGTGGTGAAACTGCTGC+TGG | + | chr4.2:26199720-26199739 | MS.gene82397:CDS | 50.0% | |
GAAAGGGACTCTGCGTTAAC+GGG | + | chr4.2:26200174-26200193 | MS.gene82397:CDS | 50.0% | |
GAACAGCAGAGTTCTCACAG+CGG | - | chr4.2:26198946-26198965 | None:intergenic | 50.0% | |
GATGCATTTATGGTGGCACG+TGG | + | chr4.2:26199501-26199520 | MS.gene82397:CDS | 50.0% | |
GGAAAGGGACTCTGCGTTAA+CGG | + | chr4.2:26200173-26200192 | MS.gene82397:CDS | 50.0% | |
TAATCTGCCTGGAGTCGTAG+TGG | + | chr4.2:26198985-26199004 | MS.gene82397:CDS | 50.0% | |
TCGCAAAAGCTTCTCGACCA+TGG | - | chr4.2:26197585-26197604 | None:intergenic | 50.0% | |
TGGCTCATGATGTGAAGCCT+GGG | + | chr4.2:26198843-26198862 | MS.gene82397:CDS | 50.0% | |
TTGGCTCATGATGTGAAGCC+TGG | + | chr4.2:26198842-26198861 | MS.gene82397:CDS | 50.0% | |
! | AGACTCTCCAATGGGCTCAT+GGG | - | chr4.2:26199855-26199874 | None:intergenic | 50.0% |
! | TAGACTCTCCAATGGGCTCA+TGG | - | chr4.2:26199856-26199875 | None:intergenic | 50.0% |
! | TCAGTAGCTTCAGCTCTGGT+TGG | - | chr4.2:26199660-26199679 | None:intergenic | 50.0% |
! | TTGGTGGCTAAATACAGGCC+AGG | + | chr4.2:26199957-26199976 | MS.gene82397:CDS | 50.0% |
!! | CAGTAACGACCGGTTTTCCT+TGG | - | chr4.2:26199599-26199618 | None:intergenic | 50.0% |
!! | GCTGAGAGCACCATTGACTA+TGG | + | chr4.2:26199792-26199811 | MS.gene82397:CDS | 50.0% |
!! | GTTGCGAATGCAGTTCTGGA+TGG | + | chr4.2:26199681-26199700 | MS.gene82397:CDS | 50.0% |
AACGCAGAGTCCCTTTCCCT+TGG | - | chr4.2:26200171-26200190 | None:intergenic | 55.0% | |
ACCAGTACCCATGAGCCCAT+TGG | + | chr4.2:26199845-26199864 | MS.gene82397:CDS | 55.0% | |
CATGACGGCGCAGAGAATTC+CGG | - | chr4.2:26197702-26197721 | None:intergenic | 55.0% | |
CGCCGTCATGCTCGATACTA+AGG | + | chr4.2:26197712-26197731 | MS.gene82397:CDS | 55.0% | |
GAGAGCTGCTCTAGCAGAGT+TGG | - | chr4.2:26199901-26199920 | None:intergenic | 55.0% | |
GGAAGATCCACTACGACTCC+AGG | - | chr4.2:26198995-26199014 | None:intergenic | 55.0% | |
TAGGGGCCTGAGATTCGAAC+TGG | + | chr4.2:26198707-26198726 | MS.gene82397:intron | 55.0% | |
! | GTCGAGAAGCTTTTGCGAGC+AGG | + | chr4.2:26197587-26197606 | MS.gene82397:CDS | 55.0% |
! | GTTGTGGTTCTGCATCGCGT+GGG | + | chr4.2:26200203-26200222 | MS.gene82397:CDS | 55.0% |
! | TAGCTTCAGCTCTGGTTGGC+CGG | - | chr4.2:26199656-26199675 | None:intergenic | 55.0% |
! | TCCAATGGGCTCATGGGTAC+TGG | - | chr4.2:26199849-26199868 | None:intergenic | 55.0% |
! | TGTTGTGGTTCTGCATCGCG+TGG | + | chr4.2:26200202-26200221 | MS.gene82397:CDS | 55.0% |
ATGGTGGCACGTGGTGACCT+TGG | + | chr4.2:26199510-26199529 | MS.gene82397:CDS | 60.0% | |
GCGCAGAGTATGACACTCCC+AGG | - | chr4.2:26198863-26198882 | None:intergenic | 60.0% | |
GGCACGTGGTGACCTTGGAA+TGG | + | chr4.2:26199515-26199534 | MS.gene82397:CDS | 60.0% | |
! | AGCTTCAGCTCTGGTTGGCC+GGG | - | chr4.2:26199655-26199674 | None:intergenic | 60.0% |
! | GCTTCAGCTCTGGTTGGCCG+GGG | - | chr4.2:26199654-26199673 | None:intergenic | 65.0% |
GCACGCTGGGACCCGCATCT+AGG | + | chr4.2:26197552-26197571 | MS.gene82397:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.2 | gene | 26197506 | 26200262 | 26197506 | ID=MS.gene82397 |
chr4.2 | mRNA | 26197506 | 26200262 | 26197506 | ID=MS.gene82397.t1;Parent=MS.gene82397 |
chr4.2 | exon | 26197506 | 26197733 | 26197506 | ID=MS.gene82397.t1.exon1;Parent=MS.gene82397.t1 |
chr4.2 | CDS | 26197506 | 26197733 | 26197506 | ID=cds.MS.gene82397.t1;Parent=MS.gene82397.t1 |
chr4.2 | exon | 26198710 | 26199171 | 26198710 | ID=MS.gene82397.t1.exon2;Parent=MS.gene82397.t1 |
chr4.2 | CDS | 26198710 | 26199171 | 26198710 | ID=cds.MS.gene82397.t1;Parent=MS.gene82397.t1 |
chr4.2 | exon | 26199450 | 26200262 | 26199450 | ID=MS.gene82397.t1.exon3;Parent=MS.gene82397.t1 |
chr4.2 | CDS | 26199450 | 26200262 | 26199450 | ID=cds.MS.gene82397.t1;Parent=MS.gene82397.t1 |
Gene Sequence |
Protein sequence |