Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene47368.t1 | XP_003590395.1 | 100 | 529 | 0 | 0 | 1 | 529 | 1 | 529 | 2.50E-296 | 1027.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene47368.t1 | B8BJ39 | 88.8 | 529 | 57 | 1 | 1 | 529 | 1 | 527 | 7.9e-267 | 920.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene47368.t1 | Q1SN32 | 100.0 | 529 | 0 | 0 | 1 | 529 | 1 | 529 | 1.8e-296 | 1027.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene47368.t1 | MTR_1g061630 | 100.000 | 529 | 0 | 0 | 1 | 529 | 1 | 529 | 0.0 | 1085 |
MS.gene47368.t1 | MTR_1g061630 | 96.975 | 529 | 0 | 1 | 1 | 529 | 1 | 513 | 0.0 | 1045 |
MS.gene47368.t1 | MTR_7g103420 | 90.359 | 529 | 49 | 1 | 1 | 529 | 1 | 527 | 0.0 | 991 |
MS.gene47368.t1 | MTR_7g103420 | 87.868 | 544 | 49 | 2 | 1 | 529 | 1 | 542 | 0.0 | 981 |
MS.gene47368.t1 | MTR_1g091040 | 81.474 | 529 | 95 | 2 | 1 | 529 | 1 | 526 | 0.0 | 910 |
MS.gene47368.t1 | MTR_7g103420 | 92.045 | 440 | 33 | 1 | 90 | 529 | 1 | 438 | 0.0 | 842 |
MS.gene47368.t1 | MTR_1g091040 | 83.014 | 365 | 59 | 2 | 165 | 529 | 32 | 393 | 0.0 | 645 |
MS.gene47368.t1 | MTR_6g004020 | 43.260 | 497 | 268 | 6 | 30 | 524 | 22 | 506 | 4.92e-128 | 383 |
MS.gene47368.t1 | MTR_4g083340 | 42.629 | 502 | 272 | 7 | 30 | 528 | 9 | 497 | 2.82e-127 | 381 |
MS.gene47368.t1 | MTR_7g100760 | 41.923 | 520 | 277 | 11 | 14 | 528 | 1 | 500 | 5.15e-124 | 373 |
MS.gene47368.t1 | MTR_4g083330 | 41.600 | 500 | 253 | 7 | 30 | 528 | 12 | 473 | 4.23e-117 | 354 |
MS.gene47368.t1 | MTR_1g105965 | 26.582 | 474 | 299 | 11 | 30 | 485 | 92 | 534 | 1.01e-44 | 166 |
MS.gene47368.t1 | MTR_5g014140 | 27.105 | 487 | 307 | 15 | 30 | 506 | 79 | 527 | 1.23e-43 | 162 |
MS.gene47368.t1 | MTR_6g034195 | 26.253 | 499 | 311 | 14 | 26 | 514 | 103 | 554 | 9.92e-43 | 160 |
MS.gene47368.t1 | MTR_1g076540 | 24.494 | 445 | 299 | 10 | 30 | 452 | 91 | 520 | 6.30e-42 | 158 |
MS.gene47368.t1 | MTR_1g099360 | 27.981 | 411 | 263 | 11 | 30 | 431 | 105 | 491 | 3.47e-40 | 153 |
MS.gene47368.t1 | MTR_5g014140 | 30.723 | 332 | 211 | 9 | 30 | 356 | 79 | 396 | 7.18e-38 | 144 |
MS.gene47368.t1 | MTR_1g105965 | 27.864 | 323 | 202 | 8 | 30 | 338 | 92 | 397 | 4.67e-34 | 133 |
MS.gene47368.t1 | MTR_1g105965 | 26.432 | 227 | 138 | 6 | 30 | 243 | 92 | 302 | 3.26e-15 | 77.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene47368.t1 | AT3G52990 | 87.902 | 529 | 62 | 1 | 1 | 529 | 1 | 527 | 0.0 | 972 |
MS.gene47368.t1 | AT2G36580 | 87.713 | 529 | 63 | 1 | 1 | 529 | 1 | 527 | 0.0 | 967 |
MS.gene47368.t1 | AT3G52990 | 87.815 | 476 | 56 | 1 | 54 | 529 | 1 | 474 | 0.0 | 877 |
MS.gene47368.t1 | AT5G63680 | 43.200 | 500 | 264 | 8 | 30 | 524 | 22 | 506 | 9.86e-125 | 375 |
MS.gene47368.t1 | AT5G63680 | 43.200 | 500 | 264 | 8 | 30 | 524 | 22 | 506 | 9.86e-125 | 375 |
MS.gene47368.t1 | AT5G63680 | 43.200 | 500 | 264 | 8 | 30 | 524 | 22 | 506 | 9.86e-125 | 375 |
MS.gene47368.t1 | AT5G56350 | 42.315 | 501 | 275 | 6 | 30 | 528 | 10 | 498 | 1.53e-124 | 374 |
MS.gene47368.t1 | AT5G08570 | 42.455 | 497 | 272 | 7 | 30 | 524 | 22 | 506 | 1.01e-122 | 370 |
MS.gene47368.t1 | AT5G08570 | 42.455 | 497 | 272 | 7 | 30 | 524 | 22 | 506 | 1.01e-122 | 370 |
MS.gene47368.t1 | AT5G08570 | 42.455 | 497 | 272 | 7 | 30 | 524 | 22 | 506 | 1.01e-122 | 370 |
MS.gene47368.t1 | AT4G26390 | 41.317 | 501 | 280 | 8 | 30 | 528 | 9 | 497 | 3.80e-120 | 363 |
MS.gene47368.t1 | AT3G04050 | 40.476 | 504 | 284 | 8 | 30 | 528 | 18 | 510 | 1.43e-115 | 351 |
MS.gene47368.t1 | AT3G25960 | 41.211 | 512 | 256 | 11 | 30 | 528 | 18 | 497 | 3.56e-115 | 350 |
MS.gene47368.t1 | AT3G55650 | 40.990 | 505 | 280 | 9 | 30 | 528 | 18 | 510 | 4.32e-114 | 348 |
MS.gene47368.t1 | AT3G55810 | 39.010 | 505 | 272 | 10 | 30 | 528 | 18 | 492 | 1.63e-101 | 315 |
MS.gene47368.t1 | AT1G32440 | 30.048 | 416 | 269 | 10 | 30 | 442 | 101 | 497 | 1.49e-46 | 171 |
MS.gene47368.t1 | AT5G52920 | 26.639 | 488 | 308 | 16 | 30 | 506 | 112 | 560 | 1.91e-40 | 154 |
MS.gene47368.t1 | AT3G22960 | 25.113 | 442 | 298 | 11 | 30 | 452 | 119 | 546 | 3.41e-40 | 154 |
Find 119 sgRNAs with CRISPR-Local
Find 325 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CGATCTGTTGAGACTATTTC+TGG | 0.131356 | 1.1:+46782975 | MS.gene47368:CDS |
GAATTTGAAGACTGCTATTA+AGG | 0.207568 | 1.1:+46783171 | MS.gene47368:CDS |
CTTGCAGAATCTCATCAAAA+TGG | 0.231739 | 1.1:-46785707 | None:intergenic |
ACAAAGATTGTTGGAACATT+AGG | 0.281854 | 1.1:+46782942 | MS.gene47368:CDS |
TTAGGTACGAGCTGCTATTA+AGG | 0.309182 | 1.1:+46787056 | MS.gene47368:intron |
CGGGACTTCCTTTCAAAGTT+AGG | 0.313184 | 1.1:+46785532 | MS.gene47368:CDS |
GAAGCTTCCTGTCCCTGGTT+GGG | 0.317827 | 1.1:-46784115 | None:intergenic |
GTCTCAACAGATCGAGATTT+AGG | 0.328629 | 1.1:-46782966 | None:intergenic |
TGACTGTCCTCTTAAAATAA+AGG | 0.336397 | 1.1:-46786840 | None:intergenic |
TGCCCTTCACAAGTGTAATA+TGG | 0.337996 | 1.1:+46786199 | MS.gene47368:CDS |
ATAATTTGCTTCACTTCATC+TGG | 0.344617 | 1.1:+46787093 | MS.gene47368:CDS |
GAGCTTCAGTGGAGCCTTTG+AGG | 0.355126 | 1.1:+46787386 | MS.gene47368:CDS |
AGGAAGTGATGCAATTCTTC+TGG | 0.357756 | 1.1:+46786553 | MS.gene47368:intron |
AGGATGGAAGCCATCCTAAT+TGG | 0.362548 | 1.1:-46782754 | None:intergenic |
ATATTGCCAATCAACTTTGA+TGG | 0.373370 | 1.1:+46784145 | MS.gene47368:CDS |
TATCCTTTCCCGTGGAAACT+TGG | 0.374791 | 1.1:+46785743 | MS.gene47368:CDS |
TGCTTCTCGAAGAACCAATT+AGG | 0.378941 | 1.1:+46782740 | MS.gene47368:CDS |
AAGCTTCCTGTCCCTGGTTG+GGG | 0.381155 | 1.1:-46784114 | None:intergenic |
ATCAAATGAATCTATTCTTA+AGG | 0.385377 | 1.1:+46787915 | MS.gene47368:CDS |
TAGCTGATTTGTCTTAAGTC+GGG | 0.393011 | 1.1:-46787358 | None:intergenic |
ACGGTAGAAATAGTCTCAAC+AGG | 0.397593 | 1.1:-46786602 | None:intergenic |
TGTCTTAAAGCTGGCATGTC+TGG | 0.401499 | 1.1:+46782999 | MS.gene47368:CDS |
TTCTGTCATTGTCATATACT+AGG | 0.404351 | 1.1:+46785391 | MS.gene47368:CDS |
TCAAGAAAACTGACCTTCTC+TGG | 0.406384 | 1.1:-46785780 | None:intergenic |
TCTGCAATGACAAAGATTGT+TGG | 0.416245 | 1.1:+46782933 | MS.gene47368:CDS |
CATTGATTTACCTACCCTTA+CGG | 0.416531 | 1.1:+46785196 | MS.gene47368:CDS |
ATCCTTTCCCGTGGAAACTT+GGG | 0.419225 | 1.1:+46785744 | MS.gene47368:CDS |
CTTAAGGTTGCCCTCGATCA+TGG | 0.441599 | 1.1:+46787931 | MS.gene47368:CDS |
TTAAGACAAATCAGCTAAAG+TGG | 0.444463 | 1.1:+46787364 | MS.gene47368:CDS |
TGAGTATCATCAGGAAACTT+TGG | 0.454011 | 1.1:+46783147 | MS.gene47368:CDS |
GCCAATCAACTTTGATGGAC+TGG | 0.454498 | 1.1:+46784150 | MS.gene47368:CDS |
CTCGATCATGGAAAAGCATT+GGG | 0.456377 | 1.1:+46787943 | MS.gene47368:CDS |
CTGAAGAAGCTTCCTGTCCC+TGG | 0.456380 | 1.1:-46784120 | None:intergenic |
CTTCACAAGTGTAATATGGC+TGG | 0.458688 | 1.1:+46786203 | MS.gene47368:CDS |
TTAGCTGATTTGTCTTAAGT+CGG | 0.461885 | 1.1:-46787359 | None:intergenic |
GGAAGTGATGCAATTCTTCT+GGG | 0.464327 | 1.1:+46786554 | MS.gene47368:intron |
AATTTGAAGACTGCTATTAA+GGG | 0.467514 | 1.1:+46783172 | MS.gene47368:CDS |
TTGCAGAATCTCATCAAAAT+GGG | 0.469955 | 1.1:-46785706 | None:intergenic |
CTCACTTGAGATAGATGCTC+AGG | 0.472962 | 1.1:+46784081 | MS.gene47368:CDS |
TTGTCTTTGACAGGTTATGC+TGG | 0.476347 | 1.1:+46784009 | MS.gene47368:intron |
AGAAGCTTCCTGTCCCTGGT+TGG | 0.479261 | 1.1:-46784116 | None:intergenic |
AAGAATTCAGCTACATTGAC+CGG | 0.479771 | 1.1:+46785140 | MS.gene47368:CDS |
AAGAGGACAGTCAAATATGT+TGG | 0.490520 | 1.1:+46786850 | MS.gene47368:CDS |
TTGCTTCACTTCATCTGGAA+GGG | 0.494881 | 1.1:+46787098 | MS.gene47368:CDS |
GCCAGTCCATCAAAGTTGAT+TGG | 0.497709 | 1.1:-46784151 | None:intergenic |
AGGCAATCACTTATTGTAAG+AGG | 0.498841 | 1.1:+46787595 | MS.gene47368:CDS |
ATTTCTGGATGTCTTAAAGC+TGG | 0.501638 | 1.1:+46782990 | MS.gene47368:CDS |
TGTTTACAGGCAGTGAAGAC+GGG | 0.502148 | 1.1:+46784737 | MS.gene47368:intron |
TTCTTCGAGAAGCAAGTGAC+TGG | 0.505750 | 1.1:-46782731 | None:intergenic |
CCTCGATCATGGAAAAGCAT+TGG | 0.507469 | 1.1:+46787942 | MS.gene47368:CDS |
ACAGAGAGAACAGGCATTGT+CGG | 0.510051 | 1.1:-46787327 | None:intergenic |
TCAGATTGATTGCAAAGTAT+AGG | 0.511913 | 1.1:+46787304 | MS.gene47368:intron |
GTGTGATCCTGAGTATCATC+AGG | 0.512114 | 1.1:+46783138 | MS.gene47368:CDS |
GGGATCACCACAGAGAGAAC+AGG | 0.513663 | 1.1:-46787336 | None:intergenic |
AATAGATTCCAAGTGGGTCA+TGG | 0.517411 | 1.1:-46786878 | None:intergenic |
GTTGTTGTTTGTCAGAAACT+TGG | 0.518492 | 1.1:+46787988 | MS.gene47368:CDS |
GAAGTGAAACTACTTCTGTA+TGG | 0.519865 | 1.1:+46784795 | MS.gene47368:CDS |
ATGACGAGGATCAGCAAGCA+TGG | 0.521837 | 1.1:-46787626 | None:intergenic |
AGCTGATTTGTCTTAAGTCG+GGG | 0.523977 | 1.1:-46787357 | None:intergenic |
CAACTTTGATGGACTGGCCC+AGG | 0.526447 | 1.1:+46784156 | MS.gene47368:CDS |
TCCCCAAGTTTCCACGGGAA+AGG | 0.532593 | 1.1:-46785746 | None:intergenic |
TACAGTGGGTGCAGAAATGC+AGG | 0.534854 | 1.1:+46784033 | MS.gene47368:CDS |
GATCAATCCCCAAGTTTCCA+CGG | 0.535570 | 1.1:-46785752 | None:intergenic |
ATTGGTCAATACTTGTTCAC+AGG | 0.536068 | 1.1:+46784773 | MS.gene47368:CDS |
CTGGGTGCCGAGACTTTACG+TGG | 0.536469 | 1.1:+46786572 | MS.gene47368:CDS |
CAGCTAAAGTGGAGCTTCAG+TGG | 0.537841 | 1.1:+46787375 | MS.gene47368:CDS |
TGCAGGTATCTGAAGTCAAA+GGG | 0.540186 | 1.1:+46785096 | MS.gene47368:intron |
AAAGTTTCCTGATGATACTC+AGG | 0.541037 | 1.1:-46783145 | None:intergenic |
CAGCCATATTACACTTGTGA+AGG | 0.543577 | 1.1:-46786202 | None:intergenic |
TTCACAAGTGTAATATGGCT+GGG | 0.544154 | 1.1:+46786204 | MS.gene47368:CDS |
TTTGCTTCACTTCATCTGGA+AGG | 0.544585 | 1.1:+46787097 | MS.gene47368:CDS |
TTGTTTACAGGCAGTGAAGA+CGG | 0.546108 | 1.1:+46784736 | MS.gene47368:intron |
CGTTGGTAGAATTTGTTCAG+AGG | 0.548713 | 1.1:+46786622 | MS.gene47368:CDS |
TAAGATCGCCTAACTTTGAA+AGG | 0.549278 | 1.1:-46785540 | None:intergenic |
ATAGATTCCAAGTGGGTCAT+GGG | 0.549579 | 1.1:-46786877 | None:intergenic |
ACAACACGTGTAAGCACGGC+AGG | 0.556703 | 1.1:-46786230 | None:intergenic |
GTTGAGACTATTTCTACCGT+TGG | 0.557039 | 1.1:+46786605 | MS.gene47368:CDS |
GTGCAGGTATCTGAAGTCAA+AGG | 0.557244 | 1.1:+46785095 | MS.gene47368:intron |
TCCTTTCCCGTGGAAACTTG+GGG | 0.559016 | 1.1:+46785745 | MS.gene47368:CDS |
CTTCATCTGGAAGGGCTGCA+AGG | 0.561294 | 1.1:+46787106 | MS.gene47368:CDS |
AGCTTCCTGTCCCTGGTTGG+GGG | 0.561481 | 1.1:-46784113 | None:intergenic |
TGGAGAACCCATGACCCACT+TGG | 0.563993 | 1.1:+46786870 | MS.gene47368:CDS |
TGCCGTGCTTACACGTGTTG+TGG | 0.571991 | 1.1:+46786232 | MS.gene47368:CDS |
ATCAATCCCCAAGTTTCCAC+GGG | 0.574481 | 1.1:-46785751 | None:intergenic |
AAACTAAAATCCAACCTCAA+AGG | 0.577326 | 1.1:-46787400 | None:intergenic |
TAAATCAATGTGAATTTGAG+AGG | 0.578404 | 1.1:-46785183 | None:intergenic |
GATTGATCTTCCACCAGAGA+AGG | 0.583829 | 1.1:+46785767 | MS.gene47368:CDS |
TGCGAAGATTGAAAATGTTG+AGG | 0.584615 | 1.1:+46785579 | MS.gene47368:CDS |
GTCCACAACACGTGTAAGCA+CGG | 0.586147 | 1.1:-46786234 | None:intergenic |
CTCTGAACAAATTCTACCAA+CGG | 0.589152 | 1.1:-46786621 | None:intergenic |
TCGAGAAGCAAGTGACTGGA+AGG | 0.589412 | 1.1:-46782727 | None:intergenic |
TCTCGAAGAACCAATTAGGA+TGG | 0.590229 | 1.1:+46782744 | MS.gene47368:CDS |
ACGAGCTGCTATTAAGGTGA+AGG | 0.594799 | 1.1:+46787062 | MS.gene47368:CDS |
CTTACCATCTAAAACAGCAT+TGG | 0.603075 | 1.1:-46786306 | None:intergenic |
GAAACTTGGCGATGCATCAG+TGG | 0.604975 | 1.1:+46788002 | MS.gene47368:CDS |
GATGGTATTATCCTTTCCCG+TGG | 0.613023 | 1.1:+46785735 | MS.gene47368:CDS |
AGAAAACTGACCTTCTCTGG+TGG | 0.613887 | 1.1:-46785777 | None:intergenic |
TGACGAGGATCAGCAAGCAT+GGG | 0.614367 | 1.1:-46787625 | None:intergenic |
GCTGATTTGTCTTAAGTCGG+GGG | 0.614594 | 1.1:-46787356 | None:intergenic |
AACAGCATTGGCAACATCAG+TGG | 0.615520 | 1.1:-46786294 | None:intergenic |
TTTCAGGTTATAAGCACCTG+GGG | 0.615655 | 1.1:+46785348 | MS.gene47368:intron |
GACAATGCCTGTTCTCTCTG+TGG | 0.618678 | 1.1:+46787329 | MS.gene47368:CDS |
AAGAAACTTACGGGATGACG+AGG | 0.619090 | 1.1:-46787640 | None:intergenic |
GTACAATCCACGTAAAGTCT+CGG | 0.619277 | 1.1:-46786579 | None:intergenic |
ATGCAAAGTGAACAATGACC+CGG | 0.628706 | 1.1:-46785159 | None:intergenic |
TCAGTGGCTTCAGCACGAGT+TGG | 0.636352 | 1.1:-46786278 | None:intergenic |
AGCCATATTACACTTGTGAA+GGG | 0.636776 | 1.1:-46786201 | None:intergenic |
AACTACTTCTGTATGGCTAG+AGG | 0.637873 | 1.1:+46784802 | MS.gene47368:CDS |
CGGTAGAAATAGTCTCAACA+GGG | 0.641483 | 1.1:-46786601 | None:intergenic |
ACAGGTTATGCTGGATACAG+TGG | 0.642870 | 1.1:+46784018 | MS.gene47368:intron |
GAGATTCTGCAAGAAGCTGA+TGG | 0.651576 | 1.1:+46785717 | MS.gene47368:CDS |
AGAATTCAGCTACATTGACC+GGG | 0.653287 | 1.1:+46785141 | MS.gene47368:CDS |
GTTTCTGACAAACAACAACT+CGG | 0.679613 | 1.1:-46787984 | None:intergenic |
CAGGTTATGCTGGATACAGT+GGG | 0.682263 | 1.1:+46784019 | MS.gene47368:intron |
GGAATCTATTGCATCCTCTG+CGG | 0.689133 | 1.1:+46786891 | MS.gene47368:CDS |
AGGATGCAATAGATTCCAAG+TGG | 0.691489 | 1.1:-46786885 | None:intergenic |
TTCAGATGAAAGTACCGCAG+AGG | 0.695249 | 1.1:-46786905 | None:intergenic |
GGATGCAATAGATTCCAAGT+GGG | 0.711107 | 1.1:-46786884 | None:intergenic |
GCATGCTAAAGATGTCCGCG+AGG | 0.768045 | 1.1:+46785413 | MS.gene47368:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATATAAACTTAGAATAAA+CGG | - | chr1.1:46784970-46784989 | None:intergenic | 10.0% |
!! | AACAATAGAAAATAAAATTA+AGG | + | chr1.1:46783515-46783534 | MS.gene47368:intron | 10.0% |
!!! | TATATATATATATTTGGAAT+CGG | + | chr1.1:46784248-46784267 | MS.gene47368:intron | 10.0% |
!!! | TATTATTTTAATTATGCTTT+TGG | - | chr1.1:46785029-46785048 | None:intergenic | 10.0% |
!!! | TATTTATTTATTATCTTTTC+AGG | + | chr1.1:46785332-46785351 | MS.gene47368:intron | 10.0% |
!! | AAAATAAAAAATTGACCTAT+TGG | - | chr1.1:46784851-46784870 | None:intergenic | 15.0% |
!! | AAAATGTAAAATTTCAGATA+AGG | - | chr1.1:46783679-46783698 | None:intergenic | 15.0% |
!! | CAATAAAGAATTTGAAAATT+AGG | - | chr1.1:46784719-46784738 | None:intergenic | 15.0% |
!! | CCAAATATATATATATATAG+TGG | - | chr1.1:46784245-46784264 | None:intergenic | 15.0% |
!! | CCACTATATATATATATATT+TGG | + | chr1.1:46784242-46784261 | MS.gene47368:intron | 15.0% |
!! | CTATAAATTGTGTAAATATA+TGG | + | chr1.1:46784557-46784576 | MS.gene47368:intron | 15.0% |
!! | TACATTAAAATATCATATGA+AGG | - | chr1.1:46785508-46785527 | None:intergenic | 15.0% |
!!! | AACAGTAAATAAGTTTATTT+TGG | + | chr1.1:46785850-46785869 | MS.gene47368:intron | 15.0% |
!!! | ATTAATTTTGTTTAACATGT+TGG | + | chr1.1:46786660-46786679 | MS.gene47368:intron | 15.0% |
!!! | ATTTCTTTATTGTGATTTTA+TGG | + | chr1.1:46786693-46786712 | MS.gene47368:intron | 15.0% |
!!! | TATATTTTCTATTCATTAGA+TGG | - | chr1.1:46787494-46787513 | None:intergenic | 15.0% |
!!! | TTCATATGATATTTTAATGT+AGG | + | chr1.1:46785507-46785526 | MS.gene47368:intron | 15.0% |
!! | ATCAAATGAATCTATTCTTA+AGG | + | chr1.1:46787915-46787934 | MS.gene47368:CDS | 20.0% |
!! | CTAACTGTTAATAAATAAAC+AGG | + | chr1.1:46786533-46786552 | MS.gene47368:intron | 20.0% |
!! | GAATAGAAAATATATTGACA+AGG | + | chr1.1:46787500-46787519 | MS.gene47368:intron | 20.0% |
!! | TAGAATATAGTTATCATGAA+GGG | - | chr1.1:46786061-46786080 | None:intergenic | 20.0% |
!! | TCAAATTCTTTATTGTTTAC+AGG | + | chr1.1:46784724-46784743 | MS.gene47368:intron | 20.0% |
!! | TGCATACTTATAAATTGTAA+TGG | + | chr1.1:46785982-46786001 | MS.gene47368:intron | 20.0% |
!! | TGTTTAGATAGAAAGTTTAA+AGG | - | chr1.1:46787269-46787288 | None:intergenic | 20.0% |
!! | TTAGATGGAATTTACTATTA+AGG | - | chr1.1:46787479-46787498 | None:intergenic | 20.0% |
!! | TTGAATTGAAAAACATAAGT+AGG | + | chr1.1:46785002-46785021 | MS.gene47368:intron | 20.0% |
!!! | AGTTTTAAATCATGAATTAG+TGG | + | chr1.1:46783050-46783069 | MS.gene47368:intron | 20.0% |
!!! | CGTTTAAGTTATATTCTTAT+TGG | + | chr1.1:46785623-46785642 | MS.gene47368:intron | 20.0% |
!!! | TCGAATGTATTTTTTAAATG+TGG | - | chr1.1:46785889-46785908 | None:intergenic | 20.0% |
!!! | TTAATTGAAATTGTTGTTGA+TGG | + | chr1.1:46782892-46782911 | MS.gene47368:intron | 20.0% |
!!! | TTTCAATTTTTTGCTACTTA+TGG | + | chr1.1:46783247-46783266 | MS.gene47368:intron | 20.0% |
!!! | TTTTGTCTTAAATTGTGTTA+GGG | + | chr1.1:46783027-46783046 | MS.gene47368:intron | 20.0% |
!!! | TTTTTGTCTTAAATTGTGTT+AGG | + | chr1.1:46783026-46783045 | MS.gene47368:intron | 20.0% |
! | AAAAATACATTCGACATCTA+TGG | + | chr1.1:46785895-46785914 | MS.gene47368:intron | 25.0% |
! | AACGTTAAAACGCTAAAAAT+AGG | - | chr1.1:46783328-46783347 | None:intergenic | 25.0% |
! | AATTTGAAGACTGCTATTAA+GGG | + | chr1.1:46783172-46783191 | MS.gene47368:CDS | 25.0% |
! | AGAAGGTCATATCAATTAAT+AGG | - | chr1.1:46786399-46786418 | None:intergenic | 25.0% |
! | AGATTAGAATTGAAAACACT+AGG | - | chr1.1:46782825-46782844 | None:intergenic | 25.0% |
! | AGGTCAAAAAAGAATAGTAT+GGG | - | chr1.1:46787230-46787249 | None:intergenic | 25.0% |
! | ATGAAGAACAAATTTCATGT+GGG | - | chr1.1:46784638-46784657 | None:intergenic | 25.0% |
! | ATTGTGGAAAAAGAAACTTA+CGG | - | chr1.1:46787653-46787672 | None:intergenic | 25.0% |
! | CTAGAATATAGTTATCATGA+AGG | - | chr1.1:46786062-46786081 | None:intergenic | 25.0% |
! | CTTAATATAAATTGAGCATG+AGG | - | chr1.1:46785475-46785494 | None:intergenic | 25.0% |
! | GAAAGAGTAATAGAAACTAA+CGG | - | chr1.1:46782794-46782813 | None:intergenic | 25.0% |
! | TAAATCAATGTGAATTTGAG+AGG | - | chr1.1:46785186-46785205 | None:intergenic | 25.0% |
! | TAGCGAGACTATAAAAAATA+AGG | - | chr1.1:46786936-46786955 | None:intergenic | 25.0% |
! | TTGAAATCCTTCATGTTATT+CGG | - | chr1.1:46784432-46784451 | None:intergenic | 25.0% |
!! | AAGTTATATTCTTATTGGCT+AGG | + | chr1.1:46785628-46785647 | MS.gene47368:intron | 25.0% |
!! | AGTGTTGTTAAATAAAGTAG+CGG | - | chr1.1:46783484-46783503 | None:intergenic | 25.0% |
!! | TTCATTAGTTTGATACAGAA+AGG | - | chr1.1:46787553-46787572 | None:intergenic | 25.0% |
!!! | ATCAAGACCTTTATTTTAAG+AGG | + | chr1.1:46786833-46786852 | MS.gene47368:CDS | 25.0% |
!!! | ATGATATTTTAATGTAGGCT+CGG | + | chr1.1:46785512-46785531 | MS.gene47368:intron | 25.0% |
!!! | GGAAAGAAATTTTGTTATGT+TGG | - | chr1.1:46783307-46783326 | None:intergenic | 25.0% |
!!! | TACATCTGTTTTGTTTCTTA+GGG | + | chr1.1:46785678-46785697 | MS.gene47368:intron | 25.0% |
!!! | TCTTTTTTATGTTGCTCTAT+GGG | + | chr1.1:46786733-46786752 | MS.gene47368:intron | 25.0% |
!!! | TTACATCTGTTTTGTTTCTT+AGG | + | chr1.1:46785677-46785696 | MS.gene47368:intron | 25.0% |
!!! | TTCTTTTATTTGTGAGCTTT+TGG | - | chr1.1:46785941-46785960 | None:intergenic | 25.0% |
!!! | TTCTTTTTTATGTTGCTCTA+TGG | + | chr1.1:46786732-46786751 | MS.gene47368:intron | 25.0% |
AAAAGCGAGAATATGGAAAT+TGG | - | chr1.1:46783923-46783942 | None:intergenic | 30.0% | |
AAACTAAAATCCAACCTCAA+AGG | - | chr1.1:46787403-46787422 | None:intergenic | 30.0% | |
AAACTTCCATTTGTGTTTGT+AGG | + | chr1.1:46786157-46786176 | MS.gene47368:intron | 30.0% | |
AAAGATATAAAGACAGGTTG+TGG | - | chr1.1:46787002-46787021 | None:intergenic | 30.0% | |
AATTTCAGATAAGGTAACAC+AGG | - | chr1.1:46783670-46783689 | None:intergenic | 30.0% | |
ACAAAGATTGTTGGAACATT+AGG | + | chr1.1:46782942-46782961 | MS.gene47368:CDS | 30.0% | |
ACCAATTCAAGTAAACAATC+TGG | - | chr1.1:46785450-46785469 | None:intergenic | 30.0% | |
ATATTGCCAATCAACTTTGA+TGG | + | chr1.1:46784145-46784164 | MS.gene47368:CDS | 30.0% | |
CACATCATATAATGATGACA+AGG | - | chr1.1:46784199-46784218 | None:intergenic | 30.0% | |
CAGGTCAAAAAAGAATAGTA+TGG | - | chr1.1:46787231-46787250 | None:intergenic | 30.0% | |
CAGTAAACATACAAAAACGA+CGG | - | chr1.1:46783853-46783872 | None:intergenic | 30.0% | |
CATGAAGAACAAATTTCATG+TGG | - | chr1.1:46784639-46784658 | None:intergenic | 30.0% | |
GAAAAACCTACAAACACAAA+TGG | - | chr1.1:46786166-46786185 | None:intergenic | 30.0% | |
GAAAGTTTAAAGGACATAAG+TGG | - | chr1.1:46787259-46787278 | None:intergenic | 30.0% | |
GAAGAAATTGAATTTGACAC+AGG | + | chr1.1:46787570-46787589 | MS.gene47368:intron | 30.0% | |
GAATTAGAAAAGCGAGAATA+TGG | - | chr1.1:46783930-46783949 | None:intergenic | 30.0% | |
GAATTTGAAGACTGCTATTA+AGG | + | chr1.1:46783171-46783190 | MS.gene47368:CDS | 30.0% | |
GTTGCAAACTTTATTCCAAT+AGG | + | chr1.1:46784833-46784852 | MS.gene47368:intron | 30.0% | |
TATGTCACAAACCAACTATT+CGG | + | chr1.1:46783770-46783789 | MS.gene47368:intron | 30.0% | |
TCACACATCCAAATGAAAAA+TGG | - | chr1.1:46785243-46785262 | None:intergenic | 30.0% | |
TCAGATTGATTGCAAAGTAT+AGG | + | chr1.1:46787304-46787323 | MS.gene47368:intron | 30.0% | |
TCCAGATTGTTTACTTGAAT+TGG | + | chr1.1:46785446-46785465 | MS.gene47368:intron | 30.0% | |
TGAACTAAAACTGTGAATTG+TGG | - | chr1.1:46787669-46787688 | None:intergenic | 30.0% | |
TGACTGTCCTCTTAAAATAA+AGG | - | chr1.1:46786843-46786862 | None:intergenic | 30.0% | |
TTAAGACAAATCAGCTAAAG+TGG | + | chr1.1:46787364-46787383 | MS.gene47368:CDS | 30.0% | |
TTATGTTGAGGATCAATGAT+GGG | + | chr1.1:46783959-46783978 | MS.gene47368:intron | 30.0% | |
TTCTGTCATTGTCATATACT+AGG | + | chr1.1:46785391-46785410 | MS.gene47368:CDS | 30.0% | |
TTGCAGAATCTCATCAAAAT+GGG | - | chr1.1:46785709-46785728 | None:intergenic | 30.0% | |
TTGTGGAAAAAGAAACTTAC+GGG | - | chr1.1:46787652-46787671 | None:intergenic | 30.0% | |
TTTATGTTGAGGATCAATGA+TGG | + | chr1.1:46783958-46783977 | MS.gene47368:intron | 30.0% | |
TTTCTAAGTCCTTTCAACTT+GGG | + | chr1.1:46784910-46784929 | MS.gene47368:intron | 30.0% | |
! | AATTCATAACCCAAGTTGAA+AGG | - | chr1.1:46784922-46784941 | None:intergenic | 30.0% |
! | ATTAGTTTGATACAGAAAGG+TGG | - | chr1.1:46787550-46787569 | None:intergenic | 30.0% |
! | ATTGACAAGGATGTATGTTT+TGG | + | chr1.1:46787513-46787532 | MS.gene47368:intron | 30.0% |
! | GTTTACTGTCAATTTTCTCA+AGG | + | chr1.1:46783865-46783884 | MS.gene47368:intron | 30.0% |
! | TCAATTTTTCTTTCCTCTCA+GGG | + | chr1.1:46784516-46784535 | MS.gene47368:intron | 30.0% |
! | TTTTCTAAGTCCTTTCAACT+TGG | + | chr1.1:46784909-46784928 | MS.gene47368:intron | 30.0% |
!! | ATAATTTGCTTCACTTCATC+TGG | + | chr1.1:46787093-46787112 | MS.gene47368:CDS | 30.0% |
!! | GGTAAGTTCCATTTTTCATT+TGG | + | chr1.1:46785232-46785251 | MS.gene47368:intron | 30.0% |
!! | TTAGCTGATTTGTCTTAAGT+CGG | - | chr1.1:46787362-46787381 | None:intergenic | 30.0% |
!! | TTCACAAAGGTTTTATGTTG+AGG | + | chr1.1:46783947-46783966 | MS.gene47368:intron | 30.0% |
!!! | AATTTTGTTTTTAACTCCCC+AGG | - | chr1.1:46785367-46785386 | None:intergenic | 30.0% |
!!! | GATTTCAATTTTTTTGCCCA+TGG | + | chr1.1:46784444-46784463 | MS.gene47368:intron | 30.0% |
!!! | GTTTGTTTTATGCTGAAAGA+AGG | + | chr1.1:46783281-46783300 | MS.gene47368:intron | 30.0% |
!!! | TGATATTTTAATGTAGGCTC+GGG | + | chr1.1:46785513-46785532 | MS.gene47368:intron | 30.0% |
!!! | TTTGTTGTTGTTTTATGCAG+TGG | + | chr1.1:46783096-46783115 | MS.gene47368:intron | 30.0% |
!!! | TTTTTTTTGTGTAGCAGTTG+TGG | - | chr1.1:46784385-46784404 | None:intergenic | 30.0% |
AAAAAGTGAAGCAGCAGATA+AGG | - | chr1.1:46783229-46783248 | None:intergenic | 35.0% | |
AAACATATCCATCCATTGAG+TGG | - | chr1.1:46786511-46786530 | None:intergenic | 35.0% | |
AAAGTTTCCTGATGATACTC+AGG | - | chr1.1:46783148-46783167 | None:intergenic | 35.0% | |
AAATCCTTCATGTTATTCGG+TGG | - | chr1.1:46784429-46784448 | None:intergenic | 35.0% | |
AAGAATTCAGCTACATTGAC+CGG | + | chr1.1:46785140-46785159 | MS.gene47368:CDS | 35.0% | |
AAGAGGACAGTCAAATATGT+TGG | + | chr1.1:46786850-46786869 | MS.gene47368:CDS | 35.0% | |
AATACATTCGACATCTATGG+TGG | + | chr1.1:46785898-46785917 | MS.gene47368:intron | 35.0% | |
AATTGAATTTGACACAGGCA+AGG | + | chr1.1:46787575-46787594 | MS.gene47368:intron | 35.0% | |
AGCCATATTACACTTGTGAA+GGG | - | chr1.1:46786204-46786223 | None:intergenic | 35.0% | |
AGGCAATCACTTATTGTAAG+AGG | + | chr1.1:46787595-46787614 | MS.gene47368:CDS | 35.0% | |
ATAAGGTAACACAGGTTTCA+GGG | - | chr1.1:46783662-46783681 | None:intergenic | 35.0% | |
ATACATTCGACATCTATGGT+GGG | + | chr1.1:46785899-46785918 | MS.gene47368:intron | 35.0% | |
ATATGAACGATAGCACAAAG+TGG | - | chr1.1:46787786-46787805 | None:intergenic | 35.0% | |
ATCAACATCAATGCAACAGT+AGG | - | chr1.1:46786127-46786146 | None:intergenic | 35.0% | |
ATCATGAAGGGCAAATTCAT+AGG | - | chr1.1:46786049-46786068 | None:intergenic | 35.0% | |
ATTGGTCAATACTTGTTCAC+AGG | + | chr1.1:46784773-46784792 | MS.gene47368:CDS | 35.0% | |
CGTGCAAATCTTTACTTGTT+AGG | + | chr1.1:46787038-46787057 | MS.gene47368:intron | 35.0% | |
CTCTGAACAAATTCTACCAA+CGG | - | chr1.1:46786624-46786643 | None:intergenic | 35.0% | |
CTTGCAGAATCTCATCAAAA+TGG | - | chr1.1:46785710-46785729 | None:intergenic | 35.0% | |
GAAGTGAAACTACTTCTGTA+TGG | + | chr1.1:46784795-46784814 | MS.gene47368:CDS | 35.0% | |
GAATCAATCGTTCTCAACTT+GGG | + | chr1.1:46787175-46787194 | MS.gene47368:intron | 35.0% | |
GTTCTGTTGAGATTGTTCTT+TGG | + | chr1.1:46787709-46787728 | MS.gene47368:intron | 35.0% | |
GTTTAGAAGAATGTGCAACA+AGG | + | chr1.1:46783700-46783719 | MS.gene47368:intron | 35.0% | |
GTTTCTGACAAACAACAACT+CGG | - | chr1.1:46787987-46788006 | None:intergenic | 35.0% | |
TAAGATCGCCTAACTTTGAA+AGG | - | chr1.1:46785543-46785562 | None:intergenic | 35.0% | |
TACTTTGCAATCAATCTGAC+AGG | - | chr1.1:46787303-46787322 | None:intergenic | 35.0% | |
TCTGCAATGACAAAGATTGT+TGG | + | chr1.1:46782933-46782952 | MS.gene47368:CDS | 35.0% | |
TCTGCGATAATTATGTGATG+CGG | - | chr1.1:46787832-46787851 | None:intergenic | 35.0% | |
TCTTCGCAAAAATTTGTGTC+TGG | - | chr1.1:46785567-46785586 | None:intergenic | 35.0% | |
TGAATCAATCGTTCTCAACT+TGG | + | chr1.1:46787174-46787193 | MS.gene47368:intron | 35.0% | |
TGAGTATCATCAGGAAACTT+TGG | + | chr1.1:46783147-46783166 | MS.gene47368:CDS | 35.0% | |
TGCGAAGATTGAAAATGTTG+AGG | + | chr1.1:46785579-46785598 | MS.gene47368:CDS | 35.0% | |
TTACATGCATGATGACTGAT+GGG | + | chr1.1:46785058-46785077 | MS.gene47368:intron | 35.0% | |
TTACTCTGATTGTCTTTGAC+AGG | + | chr1.1:46784000-46784019 | MS.gene47368:intron | 35.0% | |
TTCACAAGTGTAATATGGCT+GGG | + | chr1.1:46786204-46786223 | MS.gene47368:CDS | 35.0% | |
TTGTGGTGACCAATTTATGA+TGG | - | chr1.1:46784368-46784387 | None:intergenic | 35.0% | |
TTTACATGCATGATGACTGA+TGG | + | chr1.1:46785057-46785076 | MS.gene47368:intron | 35.0% | |
! | ATTTCTGGATGTCTTAAAGC+TGG | + | chr1.1:46782990-46783009 | MS.gene47368:CDS | 35.0% |
! | CAAGACTAGCCATCATAAAT+TGG | + | chr1.1:46784356-46784375 | MS.gene47368:intron | 35.0% |
! | CTTACCATCTAAAACAGCAT+TGG | - | chr1.1:46786309-46786328 | None:intergenic | 35.0% |
! | GTCAATTTTTCTTTCCTCTC+AGG | + | chr1.1:46784515-46784534 | MS.gene47368:intron | 35.0% |
! | GTTAAGTGAAAGCATGTGAA+TGG | + | chr1.1:46783811-46783830 | MS.gene47368:intron | 35.0% |
! | GTTATCTGATGCAGCTTTTT+CGG | + | chr1.1:46786335-46786354 | MS.gene47368:intron | 35.0% |
! | TAGAAACTAACGGCTTTTGA+TGG | - | chr1.1:46782784-46782803 | None:intergenic | 35.0% |
! | TAGGCAATCTGGTTGATATT+TGG | + | chr1.1:46786369-46786388 | MS.gene47368:intron | 35.0% |
! | TTTTTGTCAGAACCACTCAA+TGG | + | chr1.1:46786496-46786515 | MS.gene47368:intron | 35.0% |
!! | CATTGATTTACCTACCCTTA+CGG | + | chr1.1:46785196-46785215 | MS.gene47368:CDS | 35.0% |
!! | CTCGCTTTTCTAATTCACAA+AGG | + | chr1.1:46783934-46783953 | MS.gene47368:intron | 35.0% |
!! | GTTGTTGTTTGTCAGAAACT+TGG | + | chr1.1:46787988-46788007 | MS.gene47368:CDS | 35.0% |
!! | TAGCTGATTTGTCTTAAGTC+GGG | - | chr1.1:46787361-46787380 | None:intergenic | 35.0% |
!! | TGAAAAGTGTCAATGAACCT+GGG | - | chr1.1:46784176-46784195 | None:intergenic | 35.0% |
!! | TGTTTTAGATGGTAAGTTGC+TGG | + | chr1.1:46786313-46786332 | MS.gene47368:intron | 35.0% |
!!! | ACGGGAGACACTATTTTTAT+TGG | + | chr1.1:46784755-46784774 | MS.gene47368:CDS | 35.0% |
!!! | TGGCTCGTTTTGATTTTTCA+TGG | + | chr1.1:46783116-46783135 | MS.gene47368:CDS | 35.0% |
!!! | TTTTCAGGTTATAAGCACCT+GGG | + | chr1.1:46785347-46785366 | MS.gene47368:intron | 35.0% |
!!! | TTTTTCGGTTGGTGAATACT+AGG | + | chr1.1:46786350-46786369 | MS.gene47368:intron | 35.0% |
AAAACACAGTACACACGCAT+TGG | - | chr1.1:46786480-46786499 | None:intergenic | 40.0% | |
AACTACTTCTGTATGGCTAG+AGG | + | chr1.1:46784802-46784821 | MS.gene47368:CDS | 40.0% | |
AAGGATGTAAACAACAGCGA+GGG | - | chr1.1:46787460-46787479 | None:intergenic | 40.0% | |
AATAGATTCCAAGTGGGTCA+TGG | - | chr1.1:46786881-46786900 | None:intergenic | 40.0% | |
ACGGTAGAAATAGTCTCAAC+AGG | - | chr1.1:46786605-46786624 | None:intergenic | 40.0% | |
ACTCAAAGCATGCACTACAT+GGG | - | chr1.1:46784497-46784516 | None:intergenic | 40.0% | |
AGAATTCAGCTACATTGACC+GGG | + | chr1.1:46785141-46785160 | MS.gene47368:CDS | 40.0% | |
AGGAAGTGATGCAATTCTTC+TGG | + | chr1.1:46786553-46786572 | MS.gene47368:intron | 40.0% | |
AGGATGCAATAGATTCCAAG+TGG | - | chr1.1:46786888-46786907 | None:intergenic | 40.0% | |
ATAGATTCCAAGTGGGTCAT+GGG | - | chr1.1:46786880-46786899 | None:intergenic | 40.0% | |
ATGCAAAGTGAACAATGACC+CGG | - | chr1.1:46785162-46785181 | None:intergenic | 40.0% | |
ATTCGGAAATCTAACGCAGT+TGG | + | chr1.1:46783787-46783806 | MS.gene47368:intron | 40.0% | |
CAGCCATATTACACTTGTGA+AGG | - | chr1.1:46786205-46786224 | None:intergenic | 40.0% | |
CGATCTGTTGAGACTATTTC+TGG | + | chr1.1:46782975-46782994 | MS.gene47368:CDS | 40.0% | |
CGGTAGAAATAGTCTCAACA+GGG | - | chr1.1:46786604-46786623 | None:intergenic | 40.0% | |
CTACAAGGACATGAAATGGA+AGG | - | chr1.1:46786797-46786816 | None:intergenic | 40.0% | |
CTGTTGAGATTGTTCTTTGG+AGG | + | chr1.1:46787712-46787731 | MS.gene47368:intron | 40.0% | |
CTTCACAAGTGTAATATGGC+TGG | + | chr1.1:46786203-46786222 | MS.gene47368:CDS | 40.0% | |
CTTCCATTTCATGTCCTTGT+AGG | + | chr1.1:46786795-46786814 | MS.gene47368:intron | 40.0% | |
GAAAACTTTCTCAGCCTACA+AGG | - | chr1.1:46786812-46786831 | None:intergenic | 40.0% | |
GAACAATCTCAACAGAACAC+TGG | - | chr1.1:46787707-46787726 | None:intergenic | 40.0% | |
GATAAGGTAACACAGGTTTC+AGG | - | chr1.1:46783663-46783682 | None:intergenic | 40.0% | |
GCGTTAGATTTCCGAATAGT+TGG | - | chr1.1:46783784-46783803 | None:intergenic | 40.0% | |
GGAAGTGATGCAATTCTTCT+GGG | + | chr1.1:46786554-46786573 | MS.gene47368:intron | 40.0% | |
GGATGCAATAGATTCCAAGT+GGG | - | chr1.1:46786887-46786906 | None:intergenic | 40.0% | |
GTACAATCCACGTAAAGTCT+CGG | - | chr1.1:46786582-46786601 | None:intergenic | 40.0% | |
GTCTCAACAGATCGAGATTT+AGG | - | chr1.1:46782969-46782988 | None:intergenic | 40.0% | |
TAAGGATGTAAACAACAGCG+AGG | - | chr1.1:46787461-46787480 | None:intergenic | 40.0% | |
TACATTCGACATCTATGGTG+GGG | + | chr1.1:46785900-46785919 | MS.gene47368:intron | 40.0% | |
TACCCTTACGGAAAAAGACA+AGG | + | chr1.1:46785208-46785227 | MS.gene47368:CDS | 40.0% | |
TCAAGAAAACTGACCTTCTC+TGG | - | chr1.1:46785783-46785802 | None:intergenic | 40.0% | |
TCTCGAAGAACCAATTAGGA+TGG | + | chr1.1:46782744-46782763 | MS.gene47368:CDS | 40.0% | |
TGCCCTTCACAAGTGTAATA+TGG | + | chr1.1:46786199-46786218 | MS.gene47368:CDS | 40.0% | |
TGCTTCTCGAAGAACCAATT+AGG | + | chr1.1:46782740-46782759 | MS.gene47368:CDS | 40.0% | |
TTAGGTACGAGCTGCTATTA+AGG | + | chr1.1:46787056-46787075 | MS.gene47368:intron | 40.0% | |
TTGCTTCACTTCATCTGGAA+GGG | + | chr1.1:46787098-46787117 | MS.gene47368:CDS | 40.0% | |
TTGGTGAATACTAGGCAATC+TGG | + | chr1.1:46786358-46786377 | MS.gene47368:intron | 40.0% | |
TTGTCTTTGACAGGTTATGC+TGG | + | chr1.1:46784009-46784028 | MS.gene47368:intron | 40.0% | |
TTGTTTACAGGCAGTGAAGA+CGG | + | chr1.1:46784736-46784755 | MS.gene47368:intron | 40.0% | |
TTTGCTTCACTTCATCTGGA+AGG | + | chr1.1:46787097-46787116 | MS.gene47368:CDS | 40.0% | |
TTTGTGAATCAATGACCACG+TGG | - | chr1.1:46783739-46783758 | None:intergenic | 40.0% | |
! | ACTTTTCAGCATCCACCAAA+TGG | - | chr1.1:46786097-46786116 | None:intergenic | 40.0% |
! | AGTCAAAGCATTCACTCCAT+GGG | - | chr1.1:46784463-46784482 | None:intergenic | 40.0% |
! | CAATGCTTTTCCATGATCGA+GGG | - | chr1.1:46787944-46787963 | None:intergenic | 40.0% |
! | CGTTGGTAGAATTTGTTCAG+AGG | + | chr1.1:46786622-46786641 | MS.gene47368:CDS | 40.0% |
! | CTCCTTGTCTTTTTCCGTAA+GGG | - | chr1.1:46785213-46785232 | None:intergenic | 40.0% |
! | TAGCTGTGTCGAGAAGTTTT+GGG | + | chr1.1:46785290-46785309 | MS.gene47368:intron | 40.0% |
! | TGCAGGTATCTGAAGTCAAA+GGG | + | chr1.1:46785096-46785115 | MS.gene47368:intron | 40.0% |
! | TTAGCTGTGTCGAGAAGTTT+TGG | + | chr1.1:46785289-46785308 | MS.gene47368:intron | 40.0% |
! | TTGAGGATCAATGATGGGAA+AGG | + | chr1.1:46783964-46783983 | MS.gene47368:intron | 40.0% |
! | TTGTCTTTTTCCGTAAGGGT+AGG | - | chr1.1:46785209-46785228 | None:intergenic | 40.0% |
!! | AGCTGATTTGTCTTAAGTCG+GGG | - | chr1.1:46787360-46787379 | None:intergenic | 40.0% |
!! | CTCGATCATGGAAAAGCATT+GGG | + | chr1.1:46787943-46787962 | MS.gene47368:CDS | 40.0% |
!! | GTGAAAAGTGTCAATGAACC+TGG | - | chr1.1:46784177-46784196 | None:intergenic | 40.0% |
!! | GTTGAGACTATTTCTACCGT+TGG | + | chr1.1:46786605-46786624 | MS.gene47368:CDS | 40.0% |
!! | TTTCAGGTTATAAGCACCTG+GGG | + | chr1.1:46785348-46785367 | MS.gene47368:intron | 40.0% |
!!! | CTTTTCAGGTTATAAGCACC+TGG | + | chr1.1:46785346-46785365 | MS.gene47368:intron | 40.0% |
!!! | GTTGCCAATGCTGTTTTAGA+TGG | + | chr1.1:46786302-46786321 | MS.gene47368:CDS | 40.0% |
AAACAAAGGCCCGTGAATGA+GGG | - | chr1.1:46783611-46783630 | None:intergenic | 45.0% | |
AAGAAACTTACGGGATGACG+AGG | - | chr1.1:46787643-46787662 | None:intergenic | 45.0% | |
ACACTTGAAGCCCCAAACAA+AGG | - | chr1.1:46783625-46783644 | None:intergenic | 45.0% | |
ACAGGTTATGCTGGATACAG+TGG | + | chr1.1:46784018-46784037 | MS.gene47368:intron | 45.0% | |
ACATTCGACATCTATGGTGG+GGG | + | chr1.1:46785901-46785920 | MS.gene47368:intron | 45.0% | |
ACGAGCTGCTATTAAGGTGA+AGG | + | chr1.1:46787062-46787081 | MS.gene47368:CDS | 45.0% | |
AGAAAACTGACCTTCTCTGG+TGG | - | chr1.1:46785780-46785799 | None:intergenic | 45.0% | |
AGAACACTGGCGATTAACTG+AGG | - | chr1.1:46787694-46787713 | None:intergenic | 45.0% | |
AGGATGGAAGCCATCCTAAT+TGG | - | chr1.1:46782757-46782776 | None:intergenic | 45.0% | |
AGTGAAGCAGCAGATAAGGA+AGG | - | chr1.1:46783225-46783244 | None:intergenic | 45.0% | |
ATCAATCCCCAAGTTTCCAC+GGG | - | chr1.1:46785754-46785773 | None:intergenic | 45.0% | |
ATCCTTTCCCGTGGAAACTT+GGG | + | chr1.1:46785744-46785763 | MS.gene47368:CDS | 45.0% | |
CAGCCTACAAGGACATGAAA+TGG | - | chr1.1:46786801-46786820 | None:intergenic | 45.0% | |
CAGGTTATGCTGGATACAGT+GGG | + | chr1.1:46784019-46784038 | MS.gene47368:intron | 45.0% | |
CCTTACGGAAAAAGACAAGG+AGG | + | chr1.1:46785211-46785230 | MS.gene47368:CDS | 45.0% | |
CCTTCTCGAAGTGACGAAAA+CGG | + | chr1.1:46786413-46786432 | MS.gene47368:intron | 45.0% | |
CGGGACTTCCTTTCAAAGTT+AGG | + | chr1.1:46785532-46785551 | MS.gene47368:CDS | 45.0% | |
CTAACATGCTCCCTCATTCA+CGG | + | chr1.1:46783598-46783617 | MS.gene47368:intron | 45.0% | |
CTCACTTGAGATAGATGCTC+AGG | + | chr1.1:46784081-46784100 | MS.gene47368:CDS | 45.0% | |
CTTCTCGAAGTGACGAAAAC+GGG | + | chr1.1:46786414-46786433 | MS.gene47368:intron | 45.0% | |
GACTCAAAGCATGCACTACA+TGG | - | chr1.1:46784498-46784517 | None:intergenic | 45.0% | |
GAGATTCTGCAAGAAGCTGA+TGG | + | chr1.1:46785717-46785736 | MS.gene47368:CDS | 45.0% | |
GATCAATCCCCAAGTTTCCA+CGG | - | chr1.1:46785755-46785774 | None:intergenic | 45.0% | |
GATGGTATTATCCTTTCCCG+TGG | + | chr1.1:46785735-46785754 | MS.gene47368:CDS | 45.0% | |
GATTGATCTTCCACCAGAGA+AGG | + | chr1.1:46785767-46785786 | MS.gene47368:CDS | 45.0% | |
GCTTCCACCGAATAACATGA+AGG | + | chr1.1:46784422-46784441 | MS.gene47368:intron | 45.0% | |
GGAATCTATTGCATCCTCTG+CGG | + | chr1.1:46786891-46786910 | MS.gene47368:CDS | 45.0% | |
GGTGGAAGCAAATGATGCAA+GGG | - | chr1.1:46784411-46784430 | None:intergenic | 45.0% | |
GTGTGATCCTGAGTATCATC+AGG | + | chr1.1:46783138-46783157 | MS.gene47368:CDS | 45.0% | |
TAACATGCTCCCTCATTCAC+GGG | + | chr1.1:46783599-46783618 | MS.gene47368:intron | 45.0% | |
TAATTATGTGATGCGGTGCG+TGG | - | chr1.1:46787825-46787844 | None:intergenic | 45.0% | |
TAGAGACTGTCTCCTCCATT+TGG | + | chr1.1:46786079-46786098 | MS.gene47368:intron | 45.0% | |
TATCCTTTCCCGTGGAAACT+TGG | + | chr1.1:46785743-46785762 | MS.gene47368:CDS | 45.0% | |
TCAGATACCTGCACAACATC+AGG | - | chr1.1:46785089-46785108 | None:intergenic | 45.0% | |
TGCACATCTTGTGCTCGTAT+TGG | - | chr1.1:46784293-46784312 | None:intergenic | 45.0% | |
TGTCAGAACCACTCAATGGA+TGG | + | chr1.1:46786500-46786519 | MS.gene47368:intron | 45.0% | |
TGTCTTAAAGCTGGCATGTC+TGG | + | chr1.1:46782999-46783018 | MS.gene47368:CDS | 45.0% | |
TGTTTACAGGCAGTGAAGAC+GGG | + | chr1.1:46784737-46784756 | MS.gene47368:intron | 45.0% | |
TTCTTCGAGAAGCAAGTGAC+TGG | - | chr1.1:46782734-46782753 | None:intergenic | 45.0% | |
TTTCAGCATCCACCAAATGG+AGG | - | chr1.1:46786094-46786113 | None:intergenic | 45.0% | |
! | AAGGACATAAGTGGTGATGC+AGG | - | chr1.1:46787250-46787269 | None:intergenic | 45.0% |
! | ACAGAGAGAACAGGCATTGT+CGG | - | chr1.1:46787330-46787349 | None:intergenic | 45.0% |
! | AGCTGTGTCGAGAAGTTTTG+GGG | + | chr1.1:46785291-46785310 | MS.gene47368:intron | 45.0% |
! | CCAATGCTTTTCCATGATCG+AGG | - | chr1.1:46787945-46787964 | None:intergenic | 45.0% |
! | CCTCCTTGTCTTTTTCCGTA+AGG | - | chr1.1:46785214-46785233 | None:intergenic | 45.0% |
! | CCTCGATCATGGAAAAGCAT+TGG | + | chr1.1:46787942-46787961 | MS.gene47368:CDS | 45.0% |
! | GAGTCAAAGCATTCACTCCA+TGG | - | chr1.1:46784464-46784483 | None:intergenic | 45.0% |
! | GCCAATCAACTTTGATGGAC+TGG | + | chr1.1:46784150-46784169 | MS.gene47368:CDS | 45.0% |
! | GCCAGTCCATCAAAGTTGAT+TGG | - | chr1.1:46784154-46784173 | None:intergenic | 45.0% |
! | GTGCAGGTATCTGAAGTCAA+AGG | + | chr1.1:46785095-46785114 | MS.gene47368:intron | 45.0% |
! | TCATTCACGGGCCTTTGTTT+GGG | + | chr1.1:46783611-46783630 | MS.gene47368:intron | 45.0% |
! | TTTGTTTGGGGCTTCAAGTG+TGG | + | chr1.1:46783624-46783643 | MS.gene47368:intron | 45.0% |
!! | AACAGCATTGGCAACATCAG+TGG | - | chr1.1:46786297-46786316 | None:intergenic | 45.0% |
!! | AACGGGCTATTTGTGCTTCT+CGG | + | chr1.1:46786431-46786450 | MS.gene47368:intron | 45.0% |
!! | AGAGCTATAGCACTGATGTG+CGG | - | chr1.1:46783403-46783422 | None:intergenic | 45.0% |
!! | GCTGATTTGTCTTAAGTCGG+GGG | - | chr1.1:46787359-46787378 | None:intergenic | 45.0% |
!! | TAACGGCTTTTGATGGCTCT+AGG | - | chr1.1:46782777-46782796 | None:intergenic | 45.0% |
!! | TTCAGATGAAAGTACCGCAG+AGG | - | chr1.1:46786908-46786927 | None:intergenic | 45.0% |
!!! | TCTGATGCAGCTTTTTCGGT+TGG | + | chr1.1:46786339-46786358 | MS.gene47368:intron | 45.0% |
!! | AATTTATATTAAGTATTAAT+AGG | + | chr1.1:46785482-46785501 | MS.gene47368:intron | 5.0% |
AGACTGTCTCCTCCATTTGG+TGG | + | chr1.1:46786082-46786101 | MS.gene47368:intron | 50.0% | |
ATGACGAGGATCAGCAAGCA+TGG | - | chr1.1:46787629-46787648 | None:intergenic | 50.0% | |
CAAACAAAGGCCCGTGAATG+AGG | - | chr1.1:46783612-46783631 | None:intergenic | 50.0% | |
CAGCTAAAGTGGAGCTTCAG+TGG | + | chr1.1:46787375-46787394 | MS.gene47368:CDS | 50.0% | |
CGGTGGAAGCAAATGATGCA+AGG | - | chr1.1:46784412-46784431 | None:intergenic | 50.0% | |
CTCATTCACGGGCCTTTGTT+TGG | + | chr1.1:46783610-46783629 | MS.gene47368:intron | 50.0% | |
CTGGAGCTCAAATTACCTCG+CGG | - | chr1.1:46785431-46785450 | None:intergenic | 50.0% | |
CTTAAGGTTGCCCTCGATCA+TGG | + | chr1.1:46787931-46787950 | MS.gene47368:CDS | 50.0% | |
GAAACTTGGCGATGCATCAG+TGG | + | chr1.1:46788002-46788021 | MS.gene47368:CDS | 50.0% | |
GACAATGCCTGTTCTCTCTG+TGG | + | chr1.1:46787329-46787348 | MS.gene47368:CDS | 50.0% | |
GGTTCAAACTCTTGACCACG+TGG | + | chr1.1:46783721-46783740 | MS.gene47368:intron | 50.0% | |
GGTTCTACCTGATGTTGTGC+AGG | + | chr1.1:46785079-46785098 | MS.gene47368:intron | 50.0% | |
GTCATATACTCTGTGTCCGC+AGG | + | chr1.1:46787870-46787889 | MS.gene47368:intron | 50.0% | |
GTCCACAACACGTGTAAGCA+CGG | - | chr1.1:46786237-46786256 | None:intergenic | 50.0% | |
GTGTTGTCAATCGCTGATCG+CGG | + | chr1.1:46783368-46783387 | MS.gene47368:intron | 50.0% | |
TACAGTGGGTGCAGAAATGC+AGG | + | chr1.1:46784033-46784052 | MS.gene47368:CDS | 50.0% | |
TCCTTTCCCGTGGAAACTTG+GGG | + | chr1.1:46785745-46785764 | MS.gene47368:CDS | 50.0% | |
TCGAGAAGCAAGTGACTGGA+AGG | - | chr1.1:46782730-46782749 | None:intergenic | 50.0% | |
TCTTTCCTCTCAGGGTTGCA+TGG | + | chr1.1:46784524-46784543 | MS.gene47368:intron | 50.0% | |
TGACGAGGATCAGCAAGCAT+GGG | - | chr1.1:46787628-46787647 | None:intergenic | 50.0% | |
! | CATTCACGGGCCTTTGTTTG+GGG | + | chr1.1:46783612-46783631 | MS.gene47368:intron | 50.0% |
! | CCGTTTTCGTCACTTCGAGA+AGG | - | chr1.1:46786416-46786435 | None:intergenic | 50.0% |
!! | TTCAGTGGAGCCTTTGAGGT+TGG | + | chr1.1:46787390-46787409 | MS.gene47368:intron | 50.0% |
!!! | GGCTTTTGATGGCTCTAGGA+TGG | - | chr1.1:46782773-46782792 | None:intergenic | 50.0% |
AAGCTTCCTGTCCCTGGTTG+GGG | - | chr1.1:46784117-46784136 | None:intergenic | 55.0% | |
ACAACACGTGTAAGCACGGC+AGG | - | chr1.1:46786233-46786252 | None:intergenic | 55.0% | |
AGAAGCTTCCTGTCCCTGGT+TGG | - | chr1.1:46784119-46784138 | None:intergenic | 55.0% | |
CTGAAGAAGCTTCCTGTCCC+TGG | - | chr1.1:46784123-46784142 | None:intergenic | 55.0% | |
CTTCATCTGGAAGGGCTGCA+AGG | + | chr1.1:46787106-46787125 | MS.gene47368:CDS | 55.0% | |
GAAGCTTCCTGTCCCTGGTT+GGG | - | chr1.1:46784118-46784137 | None:intergenic | 55.0% | |
GAGCTTCAGTGGAGCCTTTG+AGG | + | chr1.1:46787386-46787405 | MS.gene47368:CDS | 55.0% | |
GCATGCTAAAGATGTCCGCG+AGG | + | chr1.1:46785413-46785432 | MS.gene47368:CDS | 55.0% | |
GGGATCACCACAGAGAGAAC+AGG | - | chr1.1:46787339-46787358 | None:intergenic | 55.0% | |
GTTGTCTCAGACTCAGCCTG+CGG | - | chr1.1:46787889-46787908 | None:intergenic | 55.0% | |
GTTGTTCTGACCCCCAACCA+GGG | + | chr1.1:46784103-46784122 | MS.gene47368:CDS | 55.0% | |
TCAGTGGCTTCAGCACGAGT+TGG | - | chr1.1:46786281-46786300 | None:intergenic | 55.0% | |
TCCCCAAGTTTCCACGGGAA+AGG | - | chr1.1:46785749-46785768 | None:intergenic | 55.0% | |
TGCCGTGCTTACACGTGTTG+TGG | + | chr1.1:46786232-46786251 | MS.gene47368:CDS | 55.0% | |
TGGAGAACCCATGACCCACT+TGG | + | chr1.1:46786870-46786889 | MS.gene47368:CDS | 55.0% | |
TTGAGCCATGCAACCCTGAG+AGG | - | chr1.1:46784532-46784551 | None:intergenic | 55.0% | |
! | CATCTATGGTGGGGGTCTAG+AGG | + | chr1.1:46785909-46785928 | MS.gene47368:intron | 55.0% |
!! | CAACTTTGATGGACTGGCCC+AGG | + | chr1.1:46784156-46784175 | MS.gene47368:CDS | 55.0% |
AGCTTCCTGTCCCTGGTTGG+GGG | - | chr1.1:46784116-46784135 | None:intergenic | 60.0% | |
GGTTGTTCTGACCCCCAACC+AGG | + | chr1.1:46784102-46784121 | MS.gene47368:CDS | 60.0% | |
!! | CTGGGTGCCGAGACTTTACG+TGG | + | chr1.1:46786572-46786591 | MS.gene47368:CDS | 60.0% |
TCTGACCCCCAACCAGGGAC+AGG | + | chr1.1:46784108-46784127 | MS.gene47368:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.1 | gene | 46782724 | 46788050 | 46782724 | ID=MS.gene47368 |
chr1.1 | mRNA | 46782724 | 46788050 | 46782724 | ID=MS.gene47368.t1;Parent=MS.gene47368 |
chr1.1 | exon | 46782724 | 46782792 | 46782724 | ID=MS.gene47368.t1.exon1;Parent=MS.gene47368.t1 |
chr1.1 | CDS | 46782724 | 46782792 | 46782724 | ID=cds.MS.gene47368.t1;Parent=MS.gene47368.t1 |
chr1.1 | exon | 46782924 | 46783020 | 46782924 | ID=MS.gene47368.t1.exon2;Parent=MS.gene47368.t1 |
chr1.1 | CDS | 46782924 | 46783020 | 46782924 | ID=cds.MS.gene47368.t1;Parent=MS.gene47368.t1 |
chr1.1 | exon | 46783116 | 46783213 | 46783116 | ID=MS.gene47368.t1.exon3;Parent=MS.gene47368.t1 |
chr1.1 | CDS | 46783116 | 46783213 | 46783116 | ID=cds.MS.gene47368.t1;Parent=MS.gene47368.t1 |
chr1.1 | exon | 46784022 | 46784177 | 46784022 | ID=MS.gene47368.t1.exon4;Parent=MS.gene47368.t1 |
chr1.1 | CDS | 46784022 | 46784177 | 46784022 | ID=cds.MS.gene47368.t1;Parent=MS.gene47368.t1 |
chr1.1 | exon | 46784746 | 46784823 | 46784746 | ID=MS.gene47368.t1.exon5;Parent=MS.gene47368.t1 |
chr1.1 | CDS | 46784746 | 46784823 | 46784746 | ID=cds.MS.gene47368.t1;Parent=MS.gene47368.t1 |
chr1.1 | exon | 46785101 | 46785232 | 46785101 | ID=MS.gene47368.t1.exon6;Parent=MS.gene47368.t1 |
chr1.1 | CDS | 46785101 | 46785232 | 46785101 | ID=cds.MS.gene47368.t1;Parent=MS.gene47368.t1 |
chr1.1 | exon | 46785354 | 46785434 | 46785354 | ID=MS.gene47368.t1.exon7;Parent=MS.gene47368.t1 |
chr1.1 | CDS | 46785354 | 46785434 | 46785354 | ID=cds.MS.gene47368.t1;Parent=MS.gene47368.t1 |
chr1.1 | exon | 46785529 | 46785600 | 46785529 | ID=MS.gene47368.t1.exon8;Parent=MS.gene47368.t1 |
chr1.1 | CDS | 46785529 | 46785600 | 46785529 | ID=cds.MS.gene47368.t1;Parent=MS.gene47368.t1 |
chr1.1 | exon | 46785699 | 46785788 | 46785699 | ID=MS.gene47368.t1.exon9;Parent=MS.gene47368.t1 |
chr1.1 | CDS | 46785699 | 46785788 | 46785699 | ID=cds.MS.gene47368.t1;Parent=MS.gene47368.t1 |
chr1.1 | exon | 46786179 | 46786323 | 46786179 | ID=MS.gene47368.t1.exon10;Parent=MS.gene47368.t1 |
chr1.1 | CDS | 46786179 | 46786323 | 46786179 | ID=cds.MS.gene47368.t1;Parent=MS.gene47368.t1 |
chr1.1 | exon | 46786555 | 46786643 | 46786555 | ID=MS.gene47368.t1.exon11;Parent=MS.gene47368.t1 |
chr1.1 | CDS | 46786555 | 46786643 | 46786555 | ID=cds.MS.gene47368.t1;Parent=MS.gene47368.t1 |
chr1.1 | exon | 46786817 | 46786912 | 46786817 | ID=MS.gene47368.t1.exon12;Parent=MS.gene47368.t1 |
chr1.1 | CDS | 46786817 | 46786912 | 46786817 | ID=cds.MS.gene47368.t1;Parent=MS.gene47368.t1 |
chr1.1 | exon | 46787060 | 46787127 | 46787060 | ID=MS.gene47368.t1.exon13;Parent=MS.gene47368.t1 |
chr1.1 | CDS | 46787060 | 46787127 | 46787060 | ID=cds.MS.gene47368.t1;Parent=MS.gene47368.t1 |
chr1.1 | exon | 46787308 | 46787407 | 46787308 | ID=MS.gene47368.t1.exon14;Parent=MS.gene47368.t1 |
chr1.1 | CDS | 46787308 | 46787407 | 46787308 | ID=cds.MS.gene47368.t1;Parent=MS.gene47368.t1 |
chr1.1 | exon | 46787592 | 46787651 | 46787592 | ID=MS.gene47368.t1.exon15;Parent=MS.gene47368.t1 |
chr1.1 | CDS | 46787592 | 46787651 | 46787592 | ID=cds.MS.gene47368.t1;Parent=MS.gene47368.t1 |
chr1.1 | exon | 46787892 | 46788050 | 46787892 | ID=MS.gene47368.t1.exon16;Parent=MS.gene47368.t1 |
chr1.1 | CDS | 46787892 | 46788050 | 46787892 | ID=cds.MS.gene47368.t1;Parent=MS.gene47368.t1 |
Gene Sequence |
Protein sequence |