Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015322.t1 | RHN53851.1 | 96.7 | 455 | 15 | 0 | 1 | 455 | 94 | 548 | 6.70E-250 | 872.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015322.t1 | Q40546 | 81.9 | 453 | 82 | 0 | 1 | 453 | 108 | 560 | 1.6e-215 | 750.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015322.t1 | A0A396HMX9 | 96.7 | 455 | 15 | 0 | 1 | 455 | 94 | 548 | 4.8e-250 | 872.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene22462 | MS.gene015322 | PPI |
| MS.gene019892 | MS.gene015322 | PPI |
| MS.gene032695 | MS.gene015322 | PPI |
| MS.gene006867 | MS.gene015322 | PPI |
| MS.gene07416 | MS.gene015322 | PPI |
| MS.gene007327 | MS.gene015322 | PPI |
| MS.gene67287 | MS.gene015322 | PPI |
| MS.gene82768 | MS.gene015322 | PPI |
| MS.gene006868 | MS.gene015322 | PPI |
| MS.gene47368 | MS.gene015322 | PPI |
| MS.gene065294 | MS.gene015322 | PPI |
| MS.gene062243 | MS.gene015322 | PPI |
| MS.gene004893 | MS.gene015322 | PPI |
| MS.gene006203 | MS.gene015322 | PPI |
| MS.gene49179 | MS.gene015322 | PPI |
| MS.gene85589 | MS.gene015322 | PPI |
| MS.gene56458 | MS.gene015322 | PPI |
| MS.gene066245 | MS.gene015322 | PPI |
| MS.gene60646 | MS.gene015322 | PPI |
| MS.gene065645 | MS.gene015322 | PPI |
| MS.gene74717 | MS.gene015322 | PPI |
| MS.gene007459 | MS.gene015322 | PPI |
| MS.gene56459 | MS.gene015322 | PPI |
| MS.gene82398 | MS.gene015322 | PPI |
| MS.gene20039 | MS.gene015322 | PPI |
| MS.gene82397 | MS.gene015322 | PPI |
| MS.gene09810 | MS.gene015322 | PPI |
| MS.gene020572 | MS.gene015322 | PPI |
| MS.gene034948 | MS.gene015322 | PPI |
| MS.gene053108 | MS.gene015322 | PPI |
| MS.gene007617 | MS.gene015322 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015322.t1 | MTR_5g014140 | 96.484 | 455 | 16 | 0 | 1 | 455 | 94 | 548 | 0.0 | 915 |
| MS.gene015322.t1 | MTR_1g099360 | 74.393 | 453 | 116 | 0 | 1 | 453 | 120 | 572 | 0.0 | 710 |
| MS.gene015322.t1 | MTR_6g034195 | 74.009 | 454 | 118 | 0 | 1 | 454 | 122 | 575 | 0.0 | 709 |
| MS.gene015322.t1 | MTR_5g014140 | 95.710 | 303 | 10 | 1 | 1 | 300 | 94 | 396 | 0.0 | 599 |
| MS.gene015322.t1 | MTR_1g076540 | 43.860 | 456 | 234 | 7 | 5 | 439 | 110 | 564 | 1.19e-115 | 351 |
| MS.gene015322.t1 | MTR_1g105965 | 41.151 | 469 | 253 | 9 | 4 | 453 | 110 | 574 | 1.45e-105 | 325 |
| MS.gene015322.t1 | MTR_4g083340 | 38.947 | 380 | 222 | 7 | 1 | 371 | 24 | 402 | 6.04e-82 | 261 |
| MS.gene015322.t1 | MTR_7g100760 | 35.000 | 460 | 264 | 11 | 1 | 429 | 27 | 482 | 4.65e-80 | 257 |
| MS.gene015322.t1 | MTR_6g004020 | 35.948 | 459 | 261 | 11 | 1 | 429 | 37 | 492 | 6.52e-79 | 254 |
| MS.gene015322.t1 | MTR_4g083330 | 37.726 | 387 | 204 | 9 | 1 | 378 | 27 | 385 | 1.15e-73 | 239 |
| MS.gene015322.t1 | MTR_1g105965 | 45.070 | 284 | 145 | 5 | 4 | 277 | 110 | 392 | 4.92e-73 | 236 |
| MS.gene015322.t1 | MTR_1g091040 | 29.124 | 388 | 255 | 10 | 2 | 372 | 46 | 430 | 1.78e-43 | 160 |
| MS.gene015322.t1 | MTR_1g061630 | 27.195 | 467 | 274 | 16 | 7 | 434 | 51 | 490 | 1.03e-40 | 152 |
| MS.gene015322.t1 | MTR_1g061630 | 27.101 | 476 | 279 | 16 | 7 | 434 | 51 | 506 | 1.21e-40 | 152 |
| MS.gene015322.t1 | MTR_7g103420 | 27.273 | 396 | 255 | 10 | 1 | 372 | 45 | 431 | 5.78e-40 | 150 |
| MS.gene015322.t1 | MTR_7g103420 | 27.676 | 383 | 258 | 9 | 7 | 372 | 51 | 431 | 8.46e-40 | 150 |
| MS.gene015322.t1 | MTR_1g105965 | 38.860 | 193 | 108 | 4 | 4 | 187 | 110 | 301 | 7.90e-35 | 132 |
| MS.gene015322.t1 | MTR_1g091040 | 31.673 | 281 | 171 | 7 | 105 | 372 | 25 | 297 | 2.36e-33 | 130 |
| MS.gene015322.t1 | MTR_7g103420 | 27.143 | 350 | 223 | 9 | 47 | 372 | 1 | 342 | 6.02e-33 | 129 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015322.t1 | AT1G32440 | 78.146 | 453 | 98 | 1 | 1 | 453 | 116 | 567 | 0.0 | 742 |
| MS.gene015322.t1 | AT5G52920 | 73.951 | 453 | 118 | 0 | 1 | 453 | 127 | 579 | 0.0 | 716 |
| MS.gene015322.t1 | AT3G22960 | 44.053 | 454 | 234 | 8 | 5 | 439 | 138 | 590 | 1.57e-111 | 341 |
| MS.gene015322.t1 | AT5G56350 | 38.303 | 389 | 226 | 7 | 1 | 378 | 25 | 410 | 2.33e-82 | 263 |
| MS.gene015322.t1 | AT4G26390 | 36.407 | 423 | 240 | 9 | 1 | 398 | 24 | 442 | 4.18e-81 | 259 |
| MS.gene015322.t1 | AT5G63680 | 36.166 | 459 | 260 | 10 | 1 | 429 | 37 | 492 | 8.87e-81 | 259 |
| MS.gene015322.t1 | AT5G63680 | 36.166 | 459 | 260 | 10 | 1 | 429 | 37 | 492 | 8.87e-81 | 259 |
| MS.gene015322.t1 | AT5G63680 | 36.166 | 459 | 260 | 10 | 1 | 429 | 37 | 492 | 8.87e-81 | 259 |
| MS.gene015322.t1 | AT5G08570 | 35.575 | 461 | 260 | 11 | 1 | 429 | 37 | 492 | 9.04e-80 | 256 |
| MS.gene015322.t1 | AT5G08570 | 35.575 | 461 | 260 | 11 | 1 | 429 | 37 | 492 | 9.04e-80 | 256 |
| MS.gene015322.t1 | AT5G08570 | 35.575 | 461 | 260 | 11 | 1 | 429 | 37 | 492 | 9.04e-80 | 256 |
| MS.gene015322.t1 | AT3G55650 | 37.887 | 388 | 229 | 7 | 1 | 378 | 33 | 418 | 3.39e-79 | 255 |
| MS.gene015322.t1 | AT3G25960 | 34.598 | 448 | 273 | 8 | 1 | 429 | 33 | 479 | 1.67e-78 | 253 |
| MS.gene015322.t1 | AT3G04050 | 32.181 | 463 | 277 | 9 | 1 | 429 | 33 | 492 | 1.04e-72 | 238 |
| MS.gene015322.t1 | AT3G55810 | 36.364 | 352 | 201 | 7 | 43 | 378 | 56 | 400 | 1.23e-65 | 219 |
| MS.gene015322.t1 | AT3G52990 | 27.623 | 467 | 286 | 16 | 7 | 434 | 51 | 504 | 1.94e-42 | 157 |
| MS.gene015322.t1 | AT3G52990 | 27.586 | 464 | 284 | 16 | 10 | 434 | 1 | 451 | 9.35e-42 | 154 |
| MS.gene015322.t1 | AT2G36580 | 26.767 | 467 | 290 | 15 | 7 | 434 | 51 | 504 | 5.70e-40 | 150 |
| MS.gene015322.t1 | AT3G49160 | 30.568 | 229 | 141 | 6 | 93 | 310 | 473 | 694 | 4.85e-20 | 93.6 |
| MS.gene015322.t1 | AT3G49160 | 30.568 | 229 | 141 | 6 | 93 | 310 | 385 | 606 | 5.84e-20 | 93.2 |
Find 93 sgRNAs with CRISPR-Local
Find 288 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTGATGCTGTCATGCTTTC+AGG | 0.174287 | 5.4:+8045308 | MS.gene015322:CDS |
| TCCCCTTCTTTGAGTAAAAT+TGG | 0.214804 | 5.4:-8042321 | None:intergenic |
| TAGAGTGGTTTATGAGTTAA+AGG | 0.244503 | 5.4:+8042966 | MS.gene015322:CDS |
| ATATTTGTTGCCACAATAAC+TGG | 0.253207 | 5.4:-8045209 | None:intergenic |
| TTATGGAAGCTCAAATGATT+TGG | 0.306013 | 5.4:-8045990 | None:intergenic |
| CATCAGATTACCTGCAATAA+AGG | 0.308265 | 5.4:-8044247 | None:intergenic |
| TTTGAAAATTGCATGTATAT+AGG | 0.322417 | 5.4:-8046608 | None:intergenic |
| CTAGCTCACGTGACATGATT+TGG | 0.325492 | 5.4:+8042031 | None:intergenic |
| CCCATCTGAAGCTGAAAGTA+TGG | 0.327859 | 5.4:-8043196 | None:intergenic |
| AGACATAATTGTTGCATGTA+AGG | 0.339282 | 5.4:-8046191 | None:intergenic |
| GAAAGTATGGAATGAAGATT+TGG | 0.359728 | 5.4:-8043183 | None:intergenic |
| ATTATTGTGTTCACCAGAAC+TGG | 0.366269 | 5.4:+8046232 | MS.gene015322:CDS |
| GTTCTGGTGAACACAATAAT+AGG | 0.368132 | 5.4:-8046229 | None:intergenic |
| TTATGCATGCGGTGGCTCTA+AGG | 0.369389 | 5.4:+8045934 | MS.gene015322:CDS |
| CAACAGAATTATACCAGTTA+TGG | 0.376774 | 5.4:-8042747 | None:intergenic |
| GTTAAATGTCAAGTTATTGA+TGG | 0.386049 | 5.4:+8042665 | MS.gene015322:CDS |
| ATTCAAGTTCGCGAGGTTCA+TGG | 0.386523 | 5.4:+8046849 | MS.gene015322:CDS |
| GCAACGCTTCCTTCCATAAC+TGG | 0.387501 | 5.4:+8042734 | MS.gene015322:CDS |
| ATTTGGAAGCTCGCTCAAAC+TGG | 0.405107 | 5.4:+8042048 | MS.gene015322:CDS |
| AATAGCCATGGATCCAGTTC+TGG | 0.406106 | 5.4:-8046245 | None:intergenic |
| GGACCTTGGAGCTGAACTTC+CGG | 0.432212 | 5.4:+8044213 | MS.gene015322:CDS |
| GACTGGGAAGATATCAAATT+CGG | 0.436482 | 5.4:+8042895 | MS.gene015322:CDS |
| TGAAGAAGTTCCTTTATTGC+AGG | 0.447794 | 5.4:+8044237 | MS.gene015322:CDS |
| ATGGTTGCTCGTGGGGACCT+TGG | 0.459485 | 5.4:+8044199 | MS.gene015322:CDS |
| AAAGCGGAGCACAACCAATC+TGG | 0.463651 | 5.4:+8046805 | MS.gene015322:CDS |
| AGGCAAACATTGCTCCCATA+TGG | 0.466388 | 5.4:-8046171 | None:intergenic |
| TTGTTGAGTAGGGCCTATAA+TGG | 0.470791 | 5.4:-8046276 | None:intergenic |
| AATAAAGGAACTTCTTCAAC+CGG | 0.474687 | 5.4:-8044232 | None:intergenic |
| AACCTTGGTGTCAAGCATGA+TGG | 0.477591 | 5.4:-8042178 | None:intergenic |
| TTTAGGAGGAATGATGTCTC+TGG | 0.478177 | 5.4:+8042616 | MS.gene015322:intron |
| AAATCATTTGAGCTTCCATA+AGG | 0.479866 | 5.4:+8045992 | MS.gene015322:CDS |
| ATGGCGGAGAATTGAAATCT+AGG | 0.484689 | 5.4:+8042684 | MS.gene015322:CDS |
| GAAAGCAAATATTGTTGAGT+AGG | 0.489292 | 5.4:-8046287 | None:intergenic |
| TCCATACTTTCAGCTTCAGA+TGG | 0.490595 | 5.4:+8043195 | MS.gene015322:CDS |
| AGGAAGGATTAAGCAGAGGT+TGG | 0.491594 | 5.4:+8046565 | MS.gene015322:CDS |
| AGGCGTCATTTGAATGTTCG+TGG | 0.498628 | 5.4:+8042704 | MS.gene015322:CDS |
| ATGGATTCCGCACGCCAGAT+TGG | 0.500210 | 5.4:-8046819 | None:intergenic |
| TTGTAGGCAATGGTTGCTCG+TGG | 0.504158 | 5.4:+8044190 | MS.gene015322:intron |
| TATGGAATGAAGATTTGGTA+TGG | 0.504548 | 5.4:-8043178 | None:intergenic |
| TCTTTGAGTAAAATTGGTTG+TGG | 0.506244 | 5.4:-8042315 | None:intergenic |
| GGAAGGATTAAGCAGAGGTT+GGG | 0.506385 | 5.4:+8046566 | MS.gene015322:CDS |
| TGTAGGCAATGGTTGCTCGT+GGG | 0.507482 | 5.4:+8044191 | MS.gene015322:intron |
| CTTCTTATGCTGCAGAGTAA+AGG | 0.507893 | 5.4:+8046747 | MS.gene015322:intron |
| CCATACTTTCAGCTTCAGAT+GGG | 0.512422 | 5.4:+8043196 | MS.gene015322:CDS |
| TTATCTTCACAGAAAAGGAC+TGG | 0.512596 | 5.4:+8042878 | MS.gene015322:intron |
| ATAACTTTAACAGATTTCAA+TGG | 0.520035 | 5.4:-8045915 | None:intergenic |
| GACTTCCGCCCTAGTTGGTG+TGG | 0.524986 | 5.4:-8045255 | None:intergenic |
| AGAATCACTTCTTAAAACAC+TGG | 0.527093 | 5.4:-8045964 | None:intergenic |
| TTTGTCAATGATGTCGAGGT+TGG | 0.531439 | 5.4:+8042411 | MS.gene015322:CDS |
| GTAGGCAATGGTTGCTCGTG+GGG | 0.538287 | 5.4:+8044192 | MS.gene015322:intron |
| GGAGACGTTCTTCTCGTCGA+TGG | 0.538636 | 5.4:+8042432 | MS.gene015322:CDS |
| AAAGCAAATATTGTTGAGTA+GGG | 0.543382 | 5.4:-8046286 | None:intergenic |
| TAGAGCTCTCAAACTACTGT+TGG | 0.548085 | 5.4:+8046652 | MS.gene015322:CDS |
| TTATTCATCCCACACCAACT+AGG | 0.548728 | 5.4:+8045246 | MS.gene015322:CDS |
| TATTCATCCCACACCAACTA+GGG | 0.551145 | 5.4:+8045247 | MS.gene015322:CDS |
| TCTGAGACTTCCGCCCTAGT+TGG | 0.552113 | 5.4:-8045260 | None:intergenic |
| AATGCAAAAGCCAGTTATTG+TGG | 0.555416 | 5.4:+8045199 | MS.gene015322:CDS |
| ACATCCCCACTTCTAACTTC+AGG | 0.560293 | 5.4:-8042291 | None:intergenic |
| GCGAACTTGAATGTGGTGAA+TGG | 0.564425 | 5.4:-8046838 | None:intergenic |
| CGCTCAAACTGGAATGAATG+TGG | 0.566062 | 5.4:+8042059 | MS.gene015322:CDS |
| ATTTGTCAAGGATGCTAGAG+TGG | 0.569048 | 5.4:+8042951 | MS.gene015322:CDS |
| TTCCATCATGCTTGACACCA+AGG | 0.575678 | 5.4:+8042176 | MS.gene015322:CDS |
| TAAGTCAAAGACAAAAGACT+TGG | 0.575703 | 5.4:+8042643 | MS.gene015322:CDS |
| ATGGCTCAAAAGAATAGCCA+TGG | 0.577093 | 5.4:-8046257 | None:intergenic |
| CTATGCTGTATCATTTGTCA+AGG | 0.582412 | 5.4:+8042939 | MS.gene015322:CDS |
| TATCTTCACAGAAAAGGACT+GGG | 0.583985 | 5.4:+8042879 | MS.gene015322:intron |
| CAACCGGAAGTTCAGCTCCA+AGG | 0.592964 | 5.4:-8044216 | None:intergenic |
| CAGGGTCCTGAAGTTAGAAG+TGG | 0.601265 | 5.4:+8042285 | MS.gene015322:intron |
| GTTCACCAGAACTGGATCCA+TGG | 0.601626 | 5.4:+8046240 | MS.gene015322:CDS |
| CTCGTTTGAATATGTCACAT+GGG | 0.602332 | 5.4:+8042082 | MS.gene015322:CDS |
| AGGGTCCTGAAGTTAGAAGT+GGG | 0.603493 | 5.4:+8042286 | MS.gene015322:intron |
| CTTTCAGGAGAAACCGCACA+TGG | 0.609257 | 5.4:+8045323 | MS.gene015322:CDS |
| AGAATTATACCAGTTATGGA+AGG | 0.618973 | 5.4:-8042743 | None:intergenic |
| ACAGAGGAAGGATTAAGCAG+AGG | 0.619421 | 5.4:+8046561 | MS.gene015322:intron |
| GCAAACACACTTTCCATGTG+CGG | 0.620007 | 5.4:-8045336 | None:intergenic |
| TAGTTTGAGAGCTCTAGCAA+AGG | 0.632195 | 5.4:-8046645 | None:intergenic |
| AAATGTCAAGTTATTGATGG+CGG | 0.632838 | 5.4:+8042668 | MS.gene015322:CDS |
| CATACTTTCAGCTTCAGATG+GGG | 0.635143 | 5.4:+8043197 | MS.gene015322:CDS |
| ACTTCCGCCCTAGTTGGTGT+GGG | 0.639256 | 5.4:-8045254 | None:intergenic |
| AGTAAAGGTCATTTAGACGA+GGG | 0.650023 | 5.4:+8046762 | MS.gene015322:CDS |
| TCACCACATTCAAGTTCGCG+AGG | 0.654208 | 5.4:+8046842 | MS.gene015322:CDS |
| TGTTAAAGTTATGCATGCGG+TGG | 0.657671 | 5.4:+8045926 | MS.gene015322:CDS |
| TATGTTACTCTTGTTCAAAG+CGG | 0.659469 | 5.4:+8046789 | MS.gene015322:CDS |
| AGCACAACCAATCTGGCGTG+CGG | 0.662564 | 5.4:+8046812 | MS.gene015322:CDS |
| GTAAAGGTCATTTAGACGAG+GGG | 0.667617 | 5.4:+8046763 | MS.gene015322:CDS |
| GCTCGTTTGAATATGTCACA+TGG | 0.667972 | 5.4:+8042081 | MS.gene015322:CDS |
| GAGTAAAGGTCATTTAGACG+AGG | 0.670895 | 5.4:+8046761 | MS.gene015322:intron |
| TCATCCCACACCAACTAGGG+CGG | 0.676041 | 5.4:+8045250 | MS.gene015322:CDS |
| GGGTCCTGAAGTTAGAAGTG+GGG | 0.678048 | 5.4:+8042287 | MS.gene015322:intron |
| ATTGCAATTGCAGTAAGACA+AGG | 0.681715 | 5.4:+8045284 | MS.gene015322:CDS |
| TCGTTTGAATATGTCACATG+GGG | 0.683251 | 5.4:+8042083 | MS.gene015322:CDS |
| GAACCTCGCGAACTTGAATG+TGG | 0.702421 | 5.4:-8046845 | None:intergenic |
| ATCTGTTAAAGTTATGCATG+CGG | 0.709524 | 5.4:+8045923 | MS.gene015322:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTCTATAGTAAAATATAT+AGG | + | chr5.4:8044530-8044549 | MS.gene015322:intron | 10.0% |
| !!! | TGTAAGAAATTTATTTTAAA+AGG | + | chr5.4:8045872-8045891 | MS.gene015322:intron | 10.0% |
| !! | AAATATAAGGATAAATAGAA+TGG | + | chr5.4:8045545-8045564 | MS.gene015322:intron | 15.0% |
| !! | AATGTAAACACAAATTAATT+AGG | - | chr5.4:8046141-8046160 | None:intergenic | 15.0% |
| !! | CACAAATAAATATAATACTT+TGG | - | chr5.4:8044144-8044163 | None:intergenic | 15.0% |
| !! | GATTATTATAAACACAAAAT+TGG | - | chr5.4:8042508-8042527 | None:intergenic | 15.0% |
| !! | TTAAAAAAAGATGACAAATT+AGG | - | chr5.4:8045793-8045812 | None:intergenic | 15.0% |
| !! | TTGAACTGATAAAATAAAAA+AGG | - | chr5.4:8045382-8045401 | None:intergenic | 15.0% |
| !!! | ACATTTCAAGTTAAAAATAT+CGG | + | chr5.4:8043330-8043349 | MS.gene015322:intron | 15.0% |
| !!! | ATGTTTGATAATCATTATTT+TGG | + | chr5.4:8044346-8044365 | MS.gene015322:intron | 15.0% |
| !!! | ATTTACTTTTTAAAATGTCT+AGG | - | chr5.4:8045636-8045655 | None:intergenic | 15.0% |
| !!! | ATTTGAATCTTTTGTTTTAT+AGG | - | chr5.4:8044861-8044880 | None:intergenic | 15.0% |
| !!! | TCAATTTTACTATTAAAAGA+GGG | + | chr5.4:8042349-8042368 | MS.gene015322:CDS | 15.0% |
| !!! | TTCAATTTTACTATTAAAAG+AGG | + | chr5.4:8042348-8042367 | MS.gene015322:CDS | 15.0% |
| !! | AATACATAATTTGAACAATG+AGG | - | chr5.4:8043229-8043248 | None:intergenic | 20.0% |
| !! | ACAGACTATTTATATAAATG+AGG | + | chr5.4:8044565-8044584 | MS.gene015322:intron | 20.0% |
| !! | ACCATAAAAAATGTTTATGA+AGG | + | chr5.4:8044906-8044925 | MS.gene015322:intron | 20.0% |
| !! | ATAAAATAAAAAAGGAACCA+TGG | - | chr5.4:8045374-8045393 | None:intergenic | 20.0% |
| !! | ATAACTTTAACAGATTTCAA+TGG | - | chr5.4:8045918-8045937 | None:intergenic | 20.0% |
| !! | CAGACTATTTATATAAATGA+GGG | + | chr5.4:8044566-8044585 | MS.gene015322:intron | 20.0% |
| !! | GATATTATCAATCAAATCTA+CGG | - | chr5.4:8046112-8046131 | None:intergenic | 20.0% |
| !! | GATCATATTATATTATCTTG+AGG | + | chr5.4:8046483-8046502 | MS.gene015322:intron | 20.0% |
| !! | TACAATTAGATGATTACTAA+TGG | - | chr5.4:8044117-8044136 | None:intergenic | 20.0% |
| !! | TATTATAAACACAAAATTGG+AGG | - | chr5.4:8042505-8042524 | None:intergenic | 20.0% |
| !! | TCGCAAAATTATTAAAAGAA+CGG | - | chr5.4:8045056-8045075 | None:intergenic | 20.0% |
| !! | TTATATTATCTTGAGGTAAT+AGG | + | chr5.4:8046490-8046509 | MS.gene015322:intron | 20.0% |
| !! | TTTGAAAATTGCATGTATAT+AGG | - | chr5.4:8046611-8046630 | None:intergenic | 20.0% |
| !!! | AAAATCAATAGTTTTCTGAT+GGG | - | chr5.4:8042118-8042137 | None:intergenic | 20.0% |
| !!! | ACACAAATTAATTAGGTTTT+AGG | - | chr5.4:8046134-8046153 | None:intergenic | 20.0% |
| !!! | ATATCTTTTCACTGATATTT+AGG | + | chr5.4:8045090-8045109 | MS.gene015322:intron | 20.0% |
| !!! | CAAAAACATAATTACTTTTG+AGG | - | chr5.4:8042996-8043015 | None:intergenic | 20.0% |
| !!! | CAATTTTACTATTAAAAGAG+GGG | + | chr5.4:8042350-8042369 | MS.gene015322:CDS | 20.0% |
| !!! | TAATTTTATATCTTTTCCGT+AGG | + | chr5.4:8043108-8043127 | MS.gene015322:intron | 20.0% |
| !!! | TCCTTCATAAACATTTTTTA+TGG | - | chr5.4:8044910-8044929 | None:intergenic | 20.0% |
| ! | AAAGCAAATATTGTTGAGTA+GGG | - | chr5.4:8046289-8046308 | None:intergenic | 25.0% |
| ! | AAATATATAGGAGTAGATGA+CGG | + | chr5.4:8044542-8044561 | MS.gene015322:intron | 25.0% |
| ! | AAGAAGAATAGTTGTTAATC+CGG | - | chr5.4:8042263-8042282 | None:intergenic | 25.0% |
| ! | AAGGGAAACAAACAAATATA+AGG | + | chr5.4:8045532-8045551 | MS.gene015322:intron | 25.0% |
| ! | AAGTGACTAAAAATTTGAGA+CGG | + | chr5.4:8044631-8044650 | MS.gene015322:intron | 25.0% |
| ! | AGAGAATATCCATCAAAAAA+AGG | - | chr5.4:8046710-8046729 | None:intergenic | 25.0% |
| ! | ATGTTTATGAAGGAATTCAT+TGG | + | chr5.4:8044916-8044935 | MS.gene015322:intron | 25.0% |
| ! | ATTCCTCCTAAAATAACAAT+GGG | - | chr5.4:8042608-8042627 | None:intergenic | 25.0% |
| ! | CTTTAATTGTGTACATCAAT+CGG | + | chr5.4:8044710-8044729 | MS.gene015322:intron | 25.0% |
| ! | GTGAAATAAGAAGTTATAGA+TGG | - | chr5.4:8046537-8046556 | None:intergenic | 25.0% |
| ! | GTTAAATGTCAAGTTATTGA+TGG | + | chr5.4:8042665-8042684 | MS.gene015322:CDS | 25.0% |
| ! | TATGTGTGTTTCTCTAATAT+TGG | + | chr5.4:8044882-8044901 | MS.gene015322:intron | 25.0% |
| ! | TGATATAAAATATCCTCCAA+GGG | + | chr5.4:8045514-8045533 | MS.gene015322:intron | 25.0% |
| ! | TGCAATGAATAATTTAACCT+TGG | - | chr5.4:8042196-8042215 | None:intergenic | 25.0% |
| ! | TTATATTTGTTTGTTTCCCT+TGG | - | chr5.4:8045533-8045552 | None:intergenic | 25.0% |
| ! | TTCTATTTGTGTGTTATACA+AGG | - | chr5.4:8043359-8043378 | None:intergenic | 25.0% |
| !! | AACCAATTTTACTCAAAGAA+GGG | + | chr5.4:8042319-8042338 | MS.gene015322:CDS | 25.0% |
| !! | CAAAATCAATAGTTTTCTGA+TGG | - | chr5.4:8042119-8042138 | None:intergenic | 25.0% |
| !! | TTCTTATTTCACTATTACAG+AGG | + | chr5.4:8046545-8046564 | MS.gene015322:intron | 25.0% |
| !!! | AATCCCGTTTTTAATAAAAC+AGG | + | chr5.4:8045151-8045170 | MS.gene015322:intron | 25.0% |
| !!! | TATTTTGGCACATTTGATTA+GGG | + | chr5.4:8044361-8044380 | MS.gene015322:intron | 25.0% |
| !!! | TCCTCCTGTTTTATTAAAAA+CGG | - | chr5.4:8045158-8045177 | None:intergenic | 25.0% |
| !!! | TTATTTTGGCACATTTGATT+AGG | + | chr5.4:8044360-8044379 | MS.gene015322:intron | 25.0% |
| AAACCACACTTATAATGAGA+TGG | - | chr5.4:8044469-8044488 | None:intergenic | 30.0% | |
| AAATCATTTGAGCTTCCATA+AGG | + | chr5.4:8045992-8046011 | MS.gene015322:CDS | 30.0% | |
| AAATGTCAAGTTATTGATGG+CGG | + | chr5.4:8042668-8042687 | MS.gene015322:CDS | 30.0% | |
| AAATGTTAAATCAGCCATAG+CGG | - | chr5.4:8044022-8044041 | None:intergenic | 30.0% | |
| AACTTCAACTAAGCAAAGTT+TGG | + | chr5.4:8045568-8045587 | MS.gene015322:intron | 30.0% | |
| AATAAAGGAACTTCTTCAAC+CGG | - | chr5.4:8044235-8044254 | None:intergenic | 30.0% | |
| ACAGAAAATGTGGTTATCTT+TGG | - | chr5.4:8043881-8043900 | None:intergenic | 30.0% | |
| ACTTCAACTAAGCAAAGTTT+GGG | + | chr5.4:8045569-8045588 | MS.gene015322:intron | 30.0% | |
| AGAATCACTTCTTAAAACAC+TGG | - | chr5.4:8045967-8045986 | None:intergenic | 30.0% | |
| AGAATTATACCAGTTATGGA+AGG | - | chr5.4:8042746-8042765 | None:intergenic | 30.0% | |
| AGACATAATTGTTGCATGTA+AGG | - | chr5.4:8046194-8046213 | None:intergenic | 30.0% | |
| AGTAGCATAAAATTGTCAAC+TGG | - | chr5.4:8042847-8042866 | None:intergenic | 30.0% | |
| AGTTCGTGTAAAACTTTACA+TGG | - | chr5.4:8044983-8045002 | None:intergenic | 30.0% | |
| ATCTGTTAAAGTTATGCATG+CGG | + | chr5.4:8045923-8045942 | MS.gene015322:CDS | 30.0% | |
| ATTATCAATCAAATCTACGG+TGG | - | chr5.4:8046109-8046128 | None:intergenic | 30.0% | |
| CAACAGAATTATACCAGTTA+TGG | - | chr5.4:8042750-8042769 | None:intergenic | 30.0% | |
| CAGAAAATGTGGTTATCTTT+GGG | - | chr5.4:8043880-8043899 | None:intergenic | 30.0% | |
| CATTCCTCCTAAAATAACAA+TGG | - | chr5.4:8042609-8042628 | None:intergenic | 30.0% | |
| CTATATACATGTCACCAAAA+TGG | - | chr5.4:8044299-8044318 | None:intergenic | 30.0% | |
| CTCATTATAAGTGTGGTTTA+AGG | + | chr5.4:8044470-8044489 | MS.gene015322:intron | 30.0% | |
| CTCGATAAAGAAACTAAAAG+TGG | + | chr5.4:8043306-8043325 | MS.gene015322:intron | 30.0% | |
| GAAAGCAAATATTGTTGAGT+AGG | - | chr5.4:8046290-8046309 | None:intergenic | 30.0% | |
| GGATTAACAACTATTCTTCT+TGG | + | chr5.4:8042262-8042281 | MS.gene015322:intron | 30.0% | |
| GTGATATAAAATATCCTCCA+AGG | + | chr5.4:8045513-8045532 | MS.gene015322:intron | 30.0% | |
| TAAGTCAAAGACAAAAGACT+TGG | + | chr5.4:8042643-8042662 | MS.gene015322:CDS | 30.0% | |
| TAGAACTCAAAAGATGAAAC+TGG | - | chr5.4:8044167-8044186 | None:intergenic | 30.0% | |
| TAGAGTGGTTTATGAGTTAA+AGG | + | chr5.4:8042966-8042985 | MS.gene015322:CDS | 30.0% | |
| TAGAGTTTCAATGTGATATG+TGG | + | chr5.4:8044954-8044973 | MS.gene015322:intron | 30.0% | |
| TATGTTACTCTTGTTCAAAG+CGG | + | chr5.4:8046789-8046808 | MS.gene015322:CDS | 30.0% | |
| TATTTCACTATTACAGAGGA+AGG | + | chr5.4:8046549-8046568 | MS.gene015322:intron | 30.0% | |
| TCTTCCATTATTCAACTTGA+TGG | - | chr5.4:8043680-8043699 | None:intergenic | 30.0% | |
| TCTTTGAGTAAAATTGGTTG+TGG | - | chr5.4:8042318-8042337 | None:intergenic | 30.0% | |
| TGTGTTTATCTTCACAGAAA+AGG | + | chr5.4:8042873-8042892 | MS.gene015322:intron | 30.0% | |
| TTATGGAAGCTCAAATGATT+TGG | - | chr5.4:8045993-8046012 | None:intergenic | 30.0% | |
| TTCCTCCTAAAATAACAATG+GGG | - | chr5.4:8042607-8042626 | None:intergenic | 30.0% | |
| TTTCTGAACTAAGTACCTTA+TGG | - | chr5.4:8046010-8046029 | None:intergenic | 30.0% | |
| ! | AAAGTTTTACACGAACTAGA+TGG | + | chr5.4:8044986-8045005 | MS.gene015322:intron | 30.0% |
| ! | ACCAATTTTACTCAAAGAAG+GGG | + | chr5.4:8042320-8042339 | MS.gene015322:CDS | 30.0% |
| ! | ATATTTGTTGCCACAATAAC+TGG | - | chr5.4:8045212-8045231 | None:intergenic | 30.0% |
| ! | ATGCGTGTTTCTTATTTCTT+GGG | + | chr5.4:8043065-8043084 | MS.gene015322:intron | 30.0% |
| ! | CAACCAATTTTACTCAAAGA+AGG | + | chr5.4:8042318-8042337 | MS.gene015322:CDS | 30.0% |
| ! | CTATTCTTTTGAGCCATTAT+AGG | + | chr5.4:8046263-8046282 | MS.gene015322:CDS | 30.0% |
| ! | GAAACAAACAGTACTTGTTA+TGG | + | chr5.4:8046457-8046476 | MS.gene015322:intron | 30.0% |
| ! | GAAAGTATGGAATGAAGATT+TGG | - | chr5.4:8043186-8043205 | None:intergenic | 30.0% |
| ! | TATGCGTGTTTCTTATTTCT+TGG | + | chr5.4:8043064-8043083 | MS.gene015322:intron | 30.0% |
| ! | TATGGAATGAAGATTTGGTA+TGG | - | chr5.4:8043181-8043200 | None:intergenic | 30.0% |
| ! | TGTTTGTTTCTCCTAAACAA+CGG | - | chr5.4:8046447-8046466 | None:intergenic | 30.0% |
| !! | ACATGATATGTATGCCATTT+TGG | + | chr5.4:8044282-8044301 | MS.gene015322:intron | 30.0% |
| !! | CATTTTGGTGACATGTATAT+AGG | + | chr5.4:8044297-8044316 | MS.gene015322:intron | 30.0% |
| !! | CCTCCTGTTTTATTAAAAAC+GGG | - | chr5.4:8045157-8045176 | None:intergenic | 30.0% |
| !! | GGCATTTTGATATTGTAAGA+AGG | - | chr5.4:8043760-8043779 | None:intergenic | 30.0% |
| !! | TCAAGTTGAATAATGGAAGA+TGG | + | chr5.4:8043680-8043699 | MS.gene015322:intron | 30.0% |
| !! | TCATCCATCAAGTTGAATAA+TGG | + | chr5.4:8043673-8043692 | MS.gene015322:intron | 30.0% |
| !!! | ATGCATCTTCCTTTTTTTGA+TGG | + | chr5.4:8046698-8046717 | MS.gene015322:intron | 30.0% |
| !!! | CACTTTTAGTTTCTTTATCG+AGG | - | chr5.4:8043308-8043327 | None:intergenic | 30.0% |
| !!! | CTTTTGAGTTCTACTTTTGT+AGG | + | chr5.4:8044174-8044193 | MS.gene015322:intron | 30.0% |
| AAAAGGAAGATGCATGCAAT+TGG | - | chr5.4:8046693-8046712 | None:intergenic | 35.0% | |
| AACAACTATTCTTCTTGGCA+GGG | + | chr5.4:8042267-8042286 | MS.gene015322:intron | 35.0% | |
| AATGCAAAAGCCAGTTATTG+TGG | + | chr5.4:8045199-8045218 | MS.gene015322:CDS | 35.0% | |
| AATGCACAACACTAAGACAA+GGG | - | chr5.4:8043517-8043536 | None:intergenic | 35.0% | |
| AATGTTAAATCAGCCATAGC+GGG | - | chr5.4:8044021-8044040 | None:intergenic | 35.0% | |
| AGTAAAGGTCATTTAGACGA+GGG | + | chr5.4:8046762-8046781 | MS.gene015322:CDS | 35.0% | |
| ATTATTGTGTTCACCAGAAC+TGG | + | chr5.4:8046232-8046251 | MS.gene015322:CDS | 35.0% | |
| ATTCAGACAAATTCCCGTTT+CGG | - | chr5.4:8045610-8045629 | None:intergenic | 35.0% | |
| ATTGCAATTGCAGTAAGACA+AGG | + | chr5.4:8045284-8045303 | MS.gene015322:CDS | 35.0% | |
| CATAACTCGATTGCATGAAA+TGG | - | chr5.4:8043611-8043630 | None:intergenic | 35.0% | |
| CATCAGATTACCTGCAATAA+AGG | - | chr5.4:8044250-8044269 | None:intergenic | 35.0% | |
| CATTTCATGCAATCGAGTTA+TGG | + | chr5.4:8043609-8043628 | MS.gene015322:intron | 35.0% | |
| CGAGTTATGGTGAAAATTGT+CGG | + | chr5.4:8043622-8043641 | MS.gene015322:intron | 35.0% | |
| CGGGATAAACAAGCATAAAA+AGG | - | chr5.4:8043030-8043049 | None:intergenic | 35.0% | |
| CTATGCTGTATCATTTGTCA+AGG | + | chr5.4:8042939-8042958 | MS.gene015322:CDS | 35.0% | |
| CTCCAAAATATAGACTCTGA+GGG | - | chr5.4:8044090-8044109 | None:intergenic | 35.0% | |
| CTCGTTTGAATATGTCACAT+GGG | + | chr5.4:8042082-8042101 | MS.gene015322:CDS | 35.0% | |
| GACTGGGAAGATATCAAATT+CGG | + | chr5.4:8042895-8042914 | MS.gene015322:CDS | 35.0% | |
| GTATACTGCAGACGTTATTA+AGG | + | chr5.4:8043790-8043809 | MS.gene015322:intron | 35.0% | |
| GTTCTGGTGAACACAATAAT+AGG | - | chr5.4:8046232-8046251 | None:intergenic | 35.0% | |
| TAACAACTATTCTTCTTGGC+AGG | + | chr5.4:8042266-8042285 | MS.gene015322:intron | 35.0% | |
| TATATCAGCATTGTGTCCTA+CGG | - | chr5.4:8043127-8043146 | None:intergenic | 35.0% | |
| TATCAAAATGCCAGCTTACT+AGG | + | chr5.4:8043768-8043787 | MS.gene015322:intron | 35.0% | |
| TATCATACACACTACTTGCA+TGG | + | chr5.4:8043649-8043668 | MS.gene015322:intron | 35.0% | |
| TATCTTCACAGAAAAGGACT+GGG | + | chr5.4:8042879-8042898 | MS.gene015322:intron | 35.0% | |
| TATCTTTGGGTATCTGTATG+AGG | - | chr5.4:8043867-8043886 | None:intergenic | 35.0% | |
| TATTTGTTTGTTTCCCTTGG+AGG | - | chr5.4:8045530-8045549 | None:intergenic | 35.0% | |
| TCCCCTTCTTTGAGTAAAAT+TGG | - | chr5.4:8042324-8042343 | None:intergenic | 35.0% | |
| TCGTTTGAATATGTCACATG+GGG | + | chr5.4:8042083-8042102 | MS.gene015322:CDS | 35.0% | |
| TCTCCAAAATATAGACTCTG+AGG | - | chr5.4:8044091-8044110 | None:intergenic | 35.0% | |
| TGAAGAAGTTCCTTTATTGC+AGG | + | chr5.4:8044237-8044256 | MS.gene015322:CDS | 35.0% | |
| TTATCGAGGACTATGTTCAT+AGG | - | chr5.4:8043294-8043313 | None:intergenic | 35.0% | |
| TTATCTTCACAGAAAAGGAC+TGG | + | chr5.4:8042878-8042897 | MS.gene015322:intron | 35.0% | |
| ! | AAGCATTGTTCTCCAAAACA+AGG | - | chr5.4:8045707-8045726 | None:intergenic | 35.0% |
| ! | AATATAGACTCTGAGGGTAT+TGG | - | chr5.4:8044084-8044103 | None:intergenic | 35.0% |
| ! | ACATTTTTGACAGAGCCATA+TGG | + | chr5.4:8046156-8046175 | MS.gene015322:intron | 35.0% |
| ! | AGTTGAATAATGGAAGATGG+TGG | + | chr5.4:8043683-8043702 | MS.gene015322:intron | 35.0% |
| ! | ATGGTGGAACTCTTACATAT+AGG | + | chr5.4:8045005-8045024 | MS.gene015322:intron | 35.0% |
| ! | CATTTTTGACAGAGCCATAT+GGG | + | chr5.4:8046157-8046176 | MS.gene015322:intron | 35.0% |
| ! | GCAATTTTCAAATGATGCTG+AGG | + | chr5.4:8046619-8046638 | MS.gene015322:CDS | 35.0% |
| ! | GCTATGGCTGATTTAACATT+TGG | + | chr5.4:8044021-8044040 | MS.gene015322:intron | 35.0% |
| ! | GTTGAATAATGGAAGATGGT+GGG | + | chr5.4:8043684-8043703 | MS.gene015322:intron | 35.0% |
| ! | TACCCTCAGAGTCTATATTT+TGG | + | chr5.4:8044085-8044104 | MS.gene015322:intron | 35.0% |
| ! | TATTAGATTTTCCCAGTGAC+TGG | - | chr5.4:8044398-8044417 | None:intergenic | 35.0% |
| ! | TCAGCTGACGTATATTTTTC+TGG | - | chr5.4:8046392-8046411 | None:intergenic | 35.0% |
| ! | TGATTTTGTCAATGATGTCG+AGG | + | chr5.4:8042407-8042426 | MS.gene015322:CDS | 35.0% |
| ! | TGCGTGTTTCTTATTTCTTG+GGG | + | chr5.4:8043066-8043085 | MS.gene015322:intron | 35.0% |
| ! | TTCACTGATATTTAGGACGT+AGG | + | chr5.4:8045097-8045116 | MS.gene015322:intron | 35.0% |
| !! | AGTTCTACTTTTGTAGGCAA+TGG | + | chr5.4:8044180-8044199 | MS.gene015322:intron | 35.0% |
| !! | CCCGTTTTTAATAAAACAGG+AGG | + | chr5.4:8045154-8045173 | MS.gene015322:intron | 35.0% |
| !! | GAGTTTGATGTAAGTTGATC+TGG | + | chr5.4:8043386-8043405 | MS.gene015322:intron | 35.0% |
| !! | TTTTGGAGAACAATGCTTTC+AGG | + | chr5.4:8045709-8045728 | MS.gene015322:intron | 35.0% |
| !!! | AGTTATTTTTCGTCCTGCTA+TGG | + | chr5.4:8045759-8045778 | MS.gene015322:intron | 35.0% |
| !!! | TCTCTCCCCATTGTTATTTT+AGG | + | chr5.4:8042599-8042618 | MS.gene015322:intron | 35.0% |
| AGAGGTCTTACCTTTCATAG+AGG | + | chr5.4:8044824-8044843 | MS.gene015322:intron | 40.0% | |
| AGCAAGTCTCAGATTCTTAC+GGG | + | chr5.4:8043435-8043454 | MS.gene015322:intron | 40.0% | |
| ATATGTTCTGCTTCACAGCA+TGG | + | chr5.4:8043541-8043560 | MS.gene015322:intron | 40.0% | |
| ATCGATTGCAGATAGGCAAT+AGG | + | chr5.4:8042782-8042801 | MS.gene015322:intron | 40.0% | |
| ATGCACAACACTAAGACAAG+GGG | - | chr5.4:8043516-8043535 | None:intergenic | 40.0% | |
| ATGGCTCAAAAGAATAGCCA+TGG | - | chr5.4:8046260-8046279 | None:intergenic | 40.0% | |
| ATTTCTCTGCATGTCCGAAA+CGG | + | chr5.4:8045593-8045612 | MS.gene015322:intron | 40.0% | |
| ATTTGTCAAGGATGCTAGAG+TGG | + | chr5.4:8042951-8042970 | MS.gene015322:CDS | 40.0% | |
| CATACTTTCAGCTTCAGATG+GGG | + | chr5.4:8043197-8043216 | MS.gene015322:CDS | 40.0% | |
| CCACACTTATAATGAGATGG+AGG | - | chr5.4:8044466-8044485 | None:intergenic | 40.0% | |
| CCATACTTTCAGCTTCAGAT+GGG | + | chr5.4:8043196-8043215 | MS.gene015322:CDS | 40.0% | |
| CCTCCATCTCATTATAAGTG+TGG | + | chr5.4:8044463-8044482 | MS.gene015322:intron | 40.0% | |
| CTGCAGACGTTATTAAGGTT+TGG | + | chr5.4:8043795-8043814 | MS.gene015322:intron | 40.0% | |
| CTTCTTATGCTGCAGAGTAA+AGG | + | chr5.4:8046747-8046766 | MS.gene015322:intron | 40.0% | |
| GAAAGCAGTGAACTAAACGA+CGG | + | chr5.4:8044788-8044807 | MS.gene015322:intron | 40.0% | |
| GAATGCACAACACTAAGACA+AGG | - | chr5.4:8043518-8043537 | None:intergenic | 40.0% | |
| GACACTCATAATGAGACTGA+TGG | + | chr5.4:8044671-8044690 | MS.gene015322:intron | 40.0% | |
| GAGATTCGGATAATCGAGTT+AGG | - | chr5.4:8042574-8042593 | None:intergenic | 40.0% | |
| GAGCAAGTCTCAGATTCTTA+CGG | + | chr5.4:8043434-8043453 | MS.gene015322:intron | 40.0% | |
| GAGGTCTTACCTTTCATAGA+GGG | + | chr5.4:8044825-8044844 | MS.gene015322:intron | 40.0% | |
| GAGTAAAGGTCATTTAGACG+AGG | + | chr5.4:8046761-8046780 | MS.gene015322:intron | 40.0% | |
| GATGCACACTGATGTATAGA+AGG | - | chr5.4:8043272-8043291 | None:intergenic | 40.0% | |
| GCTCGTTTGAATATGTCACA+TGG | + | chr5.4:8042081-8042100 | MS.gene015322:CDS | 40.0% | |
| GGATTGAGCTACATAGAACA+TGG | - | chr5.4:8045136-8045155 | None:intergenic | 40.0% | |
| GGCAGGTTCAAACTAATTCA+GGG | - | chr5.4:8044051-8044070 | None:intergenic | 40.0% | |
| GTAAAGGTCATTTAGACGAG+GGG | + | chr5.4:8046763-8046782 | MS.gene015322:CDS | 40.0% | |
| GTTGCACTAAACGTTAACGA+TGG | + | chr5.4:8044761-8044780 | MS.gene015322:intron | 40.0% | |
| TAAACAACGGTGAGGACAAA+AGG | - | chr5.4:8046434-8046453 | None:intergenic | 40.0% | |
| TAAGACCTCTCAGTTGAGAA+AGG | - | chr5.4:8044814-8044833 | None:intergenic | 40.0% | |
| TAGAGCTCTCAAACTACTGT+TGG | + | chr5.4:8046652-8046671 | MS.gene015322:CDS | 40.0% | |
| TATTCATCCCACACCAACTA+GGG | + | chr5.4:8045247-8045266 | MS.gene015322:CDS | 40.0% | |
| TCACAGCATGGTGCATTATA+TGG | + | chr5.4:8043553-8043572 | MS.gene015322:intron | 40.0% | |
| TCCATACTTTCAGCTTCAGA+TGG | + | chr5.4:8043195-8043214 | MS.gene015322:CDS | 40.0% | |
| TCTATTACGCCCTCTATGAA+AGG | - | chr5.4:8044837-8044856 | None:intergenic | 40.0% | |
| TGTTAAAGTTATGCATGCGG+TGG | + | chr5.4:8045926-8045945 | MS.gene015322:CDS | 40.0% | |
| TTATTCATCCCACACCAACT+AGG | + | chr5.4:8045246-8045265 | MS.gene015322:CDS | 40.0% | |
| TTGTTGAGTAGGGCCTATAA+TGG | - | chr5.4:8046279-8046298 | None:intergenic | 40.0% | |
| TTTAGGAGGAATGATGTCTC+TGG | + | chr5.4:8042616-8042635 | MS.gene015322:intron | 40.0% | |
| TTTATCCCGTTGTGTGAATC+TGG | + | chr5.4:8043041-8043060 | MS.gene015322:intron | 40.0% | |
| TTTGGGTATCTGTATGAGGA+AGG | - | chr5.4:8043863-8043882 | None:intergenic | 40.0% | |
| TTTGTCAATGATGTCGAGGT+TGG | + | chr5.4:8042411-8042430 | MS.gene015322:CDS | 40.0% | |
| ! | ATGGCGGAGAATTGAAATCT+AGG | + | chr5.4:8042684-8042703 | MS.gene015322:CDS | 40.0% |
| ! | ATTAGTTTGAACCTGCCGAT+AGG | + | chr5.4:8044054-8044073 | MS.gene015322:intron | 40.0% |
| ! | GATAACCACATTTTCTGTGC+AGG | + | chr5.4:8043883-8043902 | MS.gene015322:intron | 40.0% |
| ! | GTTTTACACGAACTAGATGG+TGG | + | chr5.4:8044989-8045008 | MS.gene015322:intron | 40.0% |
| ! | TAGTTTGAGAGCTCTAGCAA+AGG | - | chr5.4:8046648-8046667 | None:intergenic | 40.0% |
| ! | TAGTTTTCTGATGGGAAGTG+TGG | - | chr5.4:8042110-8042129 | None:intergenic | 40.0% |
| ! | TTTTGTCCTCACCGTTGTTT+AGG | + | chr5.4:8046433-8046452 | MS.gene015322:intron | 40.0% |
| !! | CTGCAGACTTAACCTTGTTT+TGG | + | chr5.4:8045692-8045711 | MS.gene015322:intron | 40.0% |
| !! | GAAAGTGTGTTTGCTATCCT+CGG | + | chr5.4:8045345-8045364 | MS.gene015322:intron | 40.0% |
| !! | GAGGGTATTGGAAAACCTAT+CGG | - | chr5.4:8044072-8044091 | None:intergenic | 40.0% |
| !! | GTTTGTTTCTGCACTATTGC+TGG | + | chr5.4:8043719-8043738 | MS.gene015322:intron | 40.0% |
| !! | TTAGGTTTTGTAGCCATAGC+AGG | - | chr5.4:8045775-8045794 | None:intergenic | 40.0% |
| !!! | AATGGAAGATGGTGGGTTTT+TGG | + | chr5.4:8043691-8043710 | MS.gene015322:intron | 40.0% |
| !!! | CTCCCCATTGTTATTTTAGG+AGG | + | chr5.4:8042602-8042621 | MS.gene015322:intron | 40.0% |
| !!! | TAACTGGCTTTTGCATTCTG+TGG | - | chr5.4:8045196-8045215 | None:intergenic | 40.0% |
| AATAGCCATGGATCCAGTTC+TGG | - | chr5.4:8046248-8046267 | None:intergenic | 45.0% | |
| ACAGAGGAAGGATTAAGCAG+AGG | + | chr5.4:8046561-8046580 | MS.gene015322:intron | 45.0% | |
| ACATCCCCACTTCTAACTTC+AGG | - | chr5.4:8042294-8042313 | None:intergenic | 45.0% | |
| AGGAAGGATTAAGCAGAGGT+TGG | + | chr5.4:8046565-8046584 | MS.gene015322:CDS | 45.0% | |
| AGGCAAACATTGCTCCCATA+TGG | - | chr5.4:8046174-8046193 | None:intergenic | 45.0% | |
| AGGCGTCATTTGAATGTTCG+TGG | + | chr5.4:8042704-8042723 | MS.gene015322:CDS | 45.0% | |
| AGGGTCCTGAAGTTAGAAGT+GGG | + | chr5.4:8042286-8042305 | MS.gene015322:intron | 45.0% | |
| ATTTGGAAGCTCGCTCAAAC+TGG | + | chr5.4:8042048-8042067 | MS.gene015322:CDS | 45.0% | |
| CAAAGCCTGCACAGAAAATG+TGG | - | chr5.4:8043891-8043910 | None:intergenic | 45.0% | |
| CGCATACCAGATTCACACAA+CGG | - | chr5.4:8043050-8043069 | None:intergenic | 45.0% | |
| CGCTCAAACTGGAATGAATG+TGG | + | chr5.4:8042059-8042078 | MS.gene015322:CDS | 45.0% | |
| CGGCAGGTTCAAACTAATTC+AGG | - | chr5.4:8044052-8044071 | None:intergenic | 45.0% | |
| CTGCAGTATACCTAGTAAGC+TGG | - | chr5.4:8043781-8043800 | None:intergenic | 45.0% | |
| GCAAACACACTTTCCATGTG+CGG | - | chr5.4:8045339-8045358 | None:intergenic | 45.0% | |
| GCAAGTCTCAGATTCTTACG+GGG | + | chr5.4:8043436-8043455 | MS.gene015322:intron | 45.0% | |
| GCATACCAGATTCACACAAC+GGG | - | chr5.4:8043049-8043068 | None:intergenic | 45.0% | |
| GCGAACTTGAATGTGGTGAA+TGG | - | chr5.4:8046841-8046860 | None:intergenic | 45.0% | |
| GGAAGGATTAAGCAGAGGTT+GGG | + | chr5.4:8046566-8046585 | MS.gene015322:CDS | 45.0% | |
| GGGGAGAGAATCAAGAGATT+CGG | - | chr5.4:8042588-8042607 | None:intergenic | 45.0% | |
| GTATTGGAAAACCTATCGGC+AGG | - | chr5.4:8044068-8044087 | None:intergenic | 45.0% | |
| GTCCTTGATCGATTGCAGAT+AGG | + | chr5.4:8042775-8042794 | MS.gene015322:intron | 45.0% | |
| GTTTAGTGCAACAGCTATGC+AGG | - | chr5.4:8044753-8044772 | None:intergenic | 45.0% | |
| GTTTCTCCTAAACAACGGTG+AGG | - | chr5.4:8046442-8046461 | None:intergenic | 45.0% | |
| TGCCTATCTGCAATCGATCA+AGG | - | chr5.4:8042780-8042799 | None:intergenic | 45.0% | |
| TTCCATCATGCTTGACACCA+AGG | + | chr5.4:8042176-8042195 | MS.gene015322:CDS | 45.0% | |
| TTTCTCTGCATGTCCGAAAC+GGG | + | chr5.4:8045594-8045613 | MS.gene015322:intron | 45.0% | |
| ! | ATTCAAGTTCGCGAGGTTCA+TGG | + | chr5.4:8046849-8046868 | MS.gene015322:CDS | 45.0% |
| ! | CCCATCTGAAGCTGAAAGTA+TGG | - | chr5.4:8043199-8043218 | None:intergenic | 45.0% |
| !! | AACCTTGGTGTCAAGCATGA+TGG | - | chr5.4:8042181-8042200 | None:intergenic | 45.0% |
| AAAGCGGAGCACAACCAATC+TGG | + | chr5.4:8046805-8046824 | MS.gene015322:CDS | 50.0% | |
| ACCAAACACGACACTGACAC+CGG | + | chr5.4:8042241-8042260 | MS.gene015322:intron | 50.0% | |
| ATGCAGTAGCTCCAGTCACT+GGG | + | chr5.4:8044384-8044403 | MS.gene015322:intron | 50.0% | |
| CAGGGTCCTGAAGTTAGAAG+TGG | + | chr5.4:8042285-8042304 | MS.gene015322:intron | 50.0% | |
| CTTTCAGGAGAAACCGCACA+TGG | + | chr5.4:8045323-8045342 | MS.gene015322:CDS | 50.0% | |
| GAACCTCGCGAACTTGAATG+TGG | - | chr5.4:8046848-8046867 | None:intergenic | 50.0% | |
| GCAACGCTTCCTTCCATAAC+TGG | + | chr5.4:8042734-8042753 | MS.gene015322:CDS | 50.0% | |
| GCTGATGCTGTCATGCTTTC+AGG | + | chr5.4:8045308-8045327 | MS.gene015322:CDS | 50.0% | |
| GGGTCCTGAAGTTAGAAGTG+GGG | + | chr5.4:8042287-8042306 | MS.gene015322:intron | 50.0% | |
| GTTCACCAGAACTGGATCCA+TGG | + | chr5.4:8046240-8046259 | MS.gene015322:CDS | 50.0% | |
| TCGCTGAAAACTTCCCGCTA+TGG | + | chr5.4:8044005-8044024 | MS.gene015322:intron | 50.0% | |
| TGTAGGCAATGGTTGCTCGT+GGG | + | chr5.4:8044191-8044210 | MS.gene015322:intron | 50.0% | |
| TTGTAGGCAATGGTTGCTCG+TGG | + | chr5.4:8044190-8044209 | MS.gene015322:intron | 50.0% | |
| ! | TCACCACATTCAAGTTCGCG+AGG | + | chr5.4:8046842-8046861 | MS.gene015322:CDS | 50.0% |
| ! | TTATGCATGCGGTGGCTCTA+AGG | + | chr5.4:8045934-8045953 | MS.gene015322:CDS | 50.0% |
| !! | AGTGTGTTTGCTATCCTCGG+TGG | + | chr5.4:8045348-8045367 | MS.gene015322:intron | 50.0% |
| AAAAGGAACCATGGCCACCG+AGG | - | chr5.4:8045365-8045384 | None:intergenic | 55.0% | |
| AGCACAACCAATCTGGCGTG+CGG | + | chr5.4:8046812-8046831 | MS.gene015322:CDS | 55.0% | |
| AGCTATGCAGGCAGCAGAGA+AGG | - | chr5.4:8044741-8044760 | None:intergenic | 55.0% | |
| ATGGATTCCGCACGCCAGAT+TGG | - | chr5.4:8046822-8046841 | None:intergenic | 55.0% | |
| CAACCGGAAGTTCAGCTCCA+AGG | - | chr5.4:8044219-8044238 | None:intergenic | 55.0% | |
| CTATGCAGGCAGCAGAGAAG+GGG | - | chr5.4:8044739-8044758 | None:intergenic | 55.0% | |
| GACGGCCTTTCTCAACTGAG+AGG | + | chr5.4:8044806-8044825 | MS.gene015322:intron | 55.0% | |
| GATGCAGTAGCTCCAGTCAC+TGG | + | chr5.4:8044383-8044402 | MS.gene015322:intron | 55.0% | |
| GCTATGCAGGCAGCAGAGAA+GGG | - | chr5.4:8044740-8044759 | None:intergenic | 55.0% | |
| GGACCTTGGAGCTGAACTTC+CGG | + | chr5.4:8044213-8044232 | MS.gene015322:CDS | 55.0% | |
| GGAGACGTTCTTCTCGTCGA+TGG | + | chr5.4:8042432-8042451 | MS.gene015322:CDS | 55.0% | |
| GTAGGCAATGGTTGCTCGTG+GGG | + | chr5.4:8044192-8044211 | MS.gene015322:intron | 55.0% | |
| TCATCCCACACCAACTAGGG+CGG | + | chr5.4:8045250-8045269 | MS.gene015322:CDS | 55.0% | |
| TGCTGCAGACTAGAGCGTAG+AGG | + | chr5.4:8046078-8046097 | MS.gene015322:intron | 55.0% | |
| ! | ACTTCCGCCCTAGTTGGTGT+GGG | - | chr5.4:8045257-8045276 | None:intergenic | 55.0% |
| ! | TCCGGTGTCAGTGTCGTGTT+TGG | - | chr5.4:8042245-8042264 | None:intergenic | 55.0% |
| ! | TCTGAGACTTCCGCCCTAGT+TGG | - | chr5.4:8045263-8045282 | None:intergenic | 55.0% |
| ! | TTTGCTATCCTCGGTGGCCA+TGG | + | chr5.4:8045354-8045373 | MS.gene015322:intron | 55.0% |
| ATGGTTGCTCGTGGGGACCT+TGG | + | chr5.4:8044199-8044218 | MS.gene015322:CDS | 60.0% | |
| ! | GACTTCCGCCCTAGTTGGTG+TGG | - | chr5.4:8045258-8045277 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 8042045 | 8046875 | 8042045 | ID=MS.gene015322 |
| chr5.4 | mRNA | 8042045 | 8046875 | 8042045 | ID=MS.gene015322.t1;Parent=MS.gene015322 |
| chr5.4 | exon | 8042045 | 8042197 | 8042045 | ID=MS.gene015322.t1.exon1;Parent=MS.gene015322.t1 |
| chr5.4 | CDS | 8042045 | 8042197 | 8042045 | ID=cds.MS.gene015322.t1;Parent=MS.gene015322.t1 |
| chr5.4 | exon | 8042288 | 8042453 | 8042288 | ID=MS.gene015322.t1.exon2;Parent=MS.gene015322.t1 |
| chr5.4 | CDS | 8042288 | 8042453 | 8042288 | ID=cds.MS.gene015322.t1;Parent=MS.gene015322.t1 |
| chr5.4 | exon | 8042621 | 8042755 | 8042621 | ID=MS.gene015322.t1.exon3;Parent=MS.gene015322.t1 |
| chr5.4 | CDS | 8042621 | 8042755 | 8042621 | ID=cds.MS.gene015322.t1;Parent=MS.gene015322.t1 |
| chr5.4 | exon | 8042890 | 8043000 | 8042890 | ID=MS.gene015322.t1.exon4;Parent=MS.gene015322.t1 |
| chr5.4 | CDS | 8042890 | 8043000 | 8042890 | ID=cds.MS.gene015322.t1;Parent=MS.gene015322.t1 |
| chr5.4 | exon | 8043130 | 8043218 | 8043130 | ID=MS.gene015322.t1.exon5;Parent=MS.gene015322.t1 |
| chr5.4 | CDS | 8043130 | 8043218 | 8043130 | ID=cds.MS.gene015322.t1;Parent=MS.gene015322.t1 |
| chr5.4 | exon | 8044196 | 8044258 | 8044196 | ID=MS.gene015322.t1.exon6;Parent=MS.gene015322.t1 |
| chr5.4 | CDS | 8044196 | 8044258 | 8044196 | ID=cds.MS.gene015322.t1;Parent=MS.gene015322.t1 |
| chr5.4 | exon | 8045173 | 8045348 | 8045173 | ID=MS.gene015322.t1.exon7;Parent=MS.gene015322.t1 |
| chr5.4 | CDS | 8045173 | 8045348 | 8045173 | ID=cds.MS.gene015322.t1;Parent=MS.gene015322.t1 |
| chr5.4 | exon | 8045911 | 8046013 | 8045911 | ID=MS.gene015322.t1.exon8;Parent=MS.gene015322.t1 |
| chr5.4 | CDS | 8045911 | 8046013 | 8045911 | ID=cds.MS.gene015322.t1;Parent=MS.gene015322.t1 |
| chr5.4 | exon | 8046169 | 8046317 | 8046169 | ID=MS.gene015322.t1.exon9;Parent=MS.gene015322.t1 |
| chr5.4 | CDS | 8046169 | 8046317 | 8046169 | ID=cds.MS.gene015322.t1;Parent=MS.gene015322.t1 |
| chr5.4 | exon | 8046565 | 8046673 | 8046565 | ID=MS.gene015322.t1.exon10;Parent=MS.gene015322.t1 |
| chr5.4 | CDS | 8046565 | 8046673 | 8046565 | ID=cds.MS.gene015322.t1;Parent=MS.gene015322.t1 |
| chr5.4 | exon | 8046762 | 8046875 | 8046762 | ID=MS.gene015322.t1.exon11;Parent=MS.gene015322.t1 |
| chr5.4 | CDS | 8046762 | 8046875 | 8046762 | ID=cds.MS.gene015322.t1;Parent=MS.gene015322.t1 |
| Gene Sequence |
| Protein sequence |
