Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56459.t1 | RHN62058.1 | 99.2 | 500 | 4 | 0 | 1 | 500 | 1 | 500 | 9.90E-279 | 968.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56459.t1 | Q42954 | 87.6 | 493 | 61 | 0 | 8 | 500 | 16 | 508 | 2.0e-248 | 859.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56459.t1 | A0A396IBA8 | 99.2 | 500 | 4 | 0 | 1 | 500 | 1 | 500 | 7.1e-279 | 968.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049254 | MS.gene56459 | -0.80095 | 1.13E-48 | -1.69E-46 |
| MS.gene049343 | MS.gene56459 | -0.807289 | 5.44E-50 | -1.69E-46 |
| MS.gene050799 | MS.gene56459 | -0.804545 | 2.05E-49 | -1.69E-46 |
| MS.gene051247 | MS.gene56459 | -0.81529 | 9.97E-52 | -1.69E-46 |
| MS.gene051744 | MS.gene56459 | -0.816972 | 4.20E-52 | -1.69E-46 |
| MS.gene052519 | MS.gene56459 | -0.8106 | 1.06E-50 | -1.69E-46 |
| MS.gene053145 | MS.gene56459 | -0.803352 | 3.63E-49 | -1.69E-46 |
| MS.gene053226 | MS.gene56459 | -0.818781 | 1.64E-52 | -1.69E-46 |
| MS.gene053900 | MS.gene56459 | -0.845402 | 4.15E-59 | -1.69E-46 |
| MS.gene054651 | MS.gene56459 | -0.810194 | 1.30E-50 | -1.69E-46 |
| MS.gene054775 | MS.gene56459 | -0.813689 | 2.25E-51 | -1.69E-46 |
| MS.gene054991 | MS.gene56459 | -0.809521 | 1.82E-50 | -1.69E-46 |
| MS.gene055694 | MS.gene56459 | -0.813314 | 2.72E-51 | -1.69E-46 |
| MS.gene055818 | MS.gene56459 | -0.812945 | 3.28E-51 | -1.69E-46 |
| MS.gene056050 | MS.gene56459 | -0.844846 | 5.87E-59 | -1.69E-46 |
| MS.gene056366 | MS.gene56459 | -0.805134 | 1.55E-49 | -1.69E-46 |
| MS.gene056595 | MS.gene56459 | -0.80312 | 4.06E-49 | -1.69E-46 |
| MS.gene058625 | MS.gene56459 | -0.818189 | 2.23E-52 | -1.69E-46 |
| MS.gene05894 | MS.gene56459 | -0.824566 | 7.53E-54 | -1.69E-46 |
| MS.gene060355 | MS.gene56459 | -0.808455 | 3.07E-50 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56459.t1 | MTR_7g100760 | 93.600 | 500 | 32 | 0 | 1 | 500 | 1 | 500 | 0.0 | 969 |
| MS.gene56459.t1 | MTR_4g083330 | 93.400 | 500 | 6 | 2 | 1 | 500 | 1 | 473 | 0.0 | 943 |
| MS.gene56459.t1 | MTR_4g083340 | 89.336 | 497 | 53 | 0 | 4 | 500 | 1 | 497 | 0.0 | 926 |
| MS.gene56459.t1 | MTR_6g004020 | 78.819 | 491 | 104 | 0 | 10 | 500 | 20 | 510 | 0.0 | 818 |
| MS.gene56459.t1 | MTR_7g103420 | 42.485 | 499 | 275 | 7 | 12 | 500 | 30 | 526 | 1.67e-128 | 384 |
| MS.gene56459.t1 | MTR_1g091040 | 41.748 | 515 | 282 | 9 | 1 | 500 | 14 | 525 | 3.35e-127 | 380 |
| MS.gene56459.t1 | MTR_7g103420 | 41.634 | 514 | 273 | 9 | 12 | 500 | 30 | 541 | 1.01e-125 | 377 |
| MS.gene56459.t1 | MTR_1g061630 | 42.116 | 501 | 276 | 7 | 12 | 500 | 30 | 528 | 3.88e-124 | 373 |
| MS.gene56459.t1 | MTR_1g061630 | 41.517 | 501 | 263 | 7 | 12 | 500 | 30 | 512 | 7.78e-122 | 367 |
| MS.gene56459.t1 | MTR_7g103420 | 40.091 | 439 | 251 | 7 | 72 | 500 | 1 | 437 | 7.17e-100 | 307 |
| MS.gene56459.t1 | MTR_1g091040 | 41.962 | 367 | 207 | 5 | 138 | 500 | 28 | 392 | 1.85e-91 | 284 |
| MS.gene56459.t1 | MTR_5g014140 | 38.780 | 410 | 237 | 8 | 6 | 412 | 73 | 471 | 6.95e-89 | 283 |
| MS.gene56459.t1 | MTR_6g034195 | 35.787 | 489 | 265 | 12 | 9 | 486 | 104 | 554 | 5.99e-84 | 270 |
| MS.gene56459.t1 | MTR_1g099360 | 34.969 | 489 | 269 | 12 | 9 | 486 | 102 | 552 | 9.45e-83 | 267 |
| MS.gene56459.t1 | MTR_5g014140 | 41.617 | 334 | 181 | 7 | 6 | 333 | 73 | 398 | 7.87e-79 | 253 |
| MS.gene56459.t1 | MTR_1g076540 | 31.600 | 500 | 285 | 11 | 11 | 485 | 90 | 557 | 7.38e-71 | 236 |
| MS.gene56459.t1 | MTR_1g105965 | 32.383 | 491 | 294 | 11 | 11 | 488 | 91 | 556 | 1.32e-68 | 230 |
| MS.gene56459.t1 | MTR_1g105965 | 34.615 | 312 | 190 | 7 | 11 | 313 | 91 | 397 | 6.11e-51 | 179 |
| MS.gene56459.t1 | MTR_1g105965 | 30.093 | 216 | 138 | 6 | 11 | 218 | 91 | 301 | 1.19e-21 | 95.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56459.t1 | AT5G56350 | 89.271 | 494 | 53 | 0 | 7 | 500 | 5 | 498 | 0.0 | 908 |
| MS.gene56459.t1 | AT4G26390 | 83.603 | 494 | 81 | 0 | 7 | 500 | 4 | 497 | 0.0 | 867 |
| MS.gene56459.t1 | AT5G08570 | 79.022 | 491 | 103 | 0 | 10 | 500 | 20 | 510 | 0.0 | 821 |
| MS.gene56459.t1 | AT5G08570 | 79.022 | 491 | 103 | 0 | 10 | 500 | 20 | 510 | 0.0 | 821 |
| MS.gene56459.t1 | AT5G08570 | 79.022 | 491 | 103 | 0 | 10 | 500 | 20 | 510 | 0.0 | 821 |
| MS.gene56459.t1 | AT5G63680 | 78.702 | 493 | 105 | 0 | 8 | 500 | 18 | 510 | 0.0 | 818 |
| MS.gene56459.t1 | AT5G63680 | 78.702 | 493 | 105 | 0 | 8 | 500 | 18 | 510 | 0.0 | 818 |
| MS.gene56459.t1 | AT5G63680 | 78.702 | 493 | 105 | 0 | 8 | 500 | 18 | 510 | 0.0 | 818 |
| MS.gene56459.t1 | AT3G04050 | 73.790 | 496 | 126 | 3 | 9 | 500 | 15 | 510 | 0.0 | 758 |
| MS.gene56459.t1 | AT3G25960 | 72.470 | 494 | 123 | 4 | 9 | 500 | 15 | 497 | 0.0 | 728 |
| MS.gene56459.t1 | AT3G55650 | 71.169 | 496 | 139 | 3 | 9 | 500 | 15 | 510 | 0.0 | 726 |
| MS.gene56459.t1 | AT3G55810 | 67.944 | 496 | 137 | 4 | 9 | 500 | 15 | 492 | 0.0 | 673 |
| MS.gene56459.t1 | AT2G36580 | 43.487 | 499 | 270 | 7 | 12 | 500 | 30 | 526 | 2.93e-130 | 389 |
| MS.gene56459.t1 | AT3G52990 | 43.287 | 499 | 271 | 7 | 12 | 500 | 30 | 526 | 2.72e-129 | 386 |
| MS.gene56459.t1 | AT3G52990 | 42.526 | 475 | 261 | 7 | 36 | 500 | 1 | 473 | 3.63e-120 | 361 |
| MS.gene56459.t1 | AT5G52920 | 36.179 | 492 | 272 | 13 | 11 | 495 | 111 | 567 | 1.38e-84 | 272 |
| MS.gene56459.t1 | AT1G32440 | 39.320 | 412 | 229 | 10 | 7 | 412 | 96 | 492 | 4.09e-81 | 263 |
| MS.gene56459.t1 | AT3G22960 | 31.717 | 495 | 289 | 12 | 11 | 485 | 118 | 583 | 3.16e-70 | 235 |
| MS.gene56459.t1 | AT3G49160 | 31.618 | 272 | 159 | 9 | 73 | 322 | 325 | 591 | 1.53e-21 | 98.6 |
| MS.gene56459.t1 | AT3G49160 | 31.618 | 272 | 159 | 9 | 73 | 322 | 413 | 679 | 1.73e-21 | 98.6 |
Find 123 sgRNAs with CRISPR-Local
Find 162 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCAAACTCTGATGCATTTA+TGG | 0.128456 | 4.4:+29785641 | MS.gene56459:CDS |
| CAAAGTTTGCAACCCCTTCT+TGG | 0.251729 | 4.4:-29785608 | None:intergenic |
| CGTGCAAACGATCTTAGTTT+TGG | 0.261618 | 4.4:-29783752 | None:intergenic |
| AGGAGGGACTACTGCAAAAT+TGG | 0.314986 | 4.4:+29786088 | MS.gene56459:CDS |
| GTACAAGTTCGAAAACTTCT+AGG | 0.320879 | 4.4:+29785265 | MS.gene56459:CDS |
| TGTGAGAACTCTGCTGTTCT+AGG | 0.329692 | 4.4:+29785097 | MS.gene56459:CDS |
| GCAGAAGCAGCACTTAATAT+TGG | 0.330688 | 4.4:-29786239 | None:intergenic |
| TGATGTTGCGAATGCAGTTC+TGG | 0.344149 | 4.4:+29785827 | MS.gene56459:CDS |
| GAAAGGGACTCTGCGTTAAC+GGG | 0.361244 | 4.4:+29786324 | MS.gene56459:CDS |
| CTTATCGTGTGACAAAGAAT+TGG | 0.361638 | 4.4:+29785057 | MS.gene56459:CDS |
| TTGTATTCTCATCACCCTTT+AGG | 0.370256 | 4.4:-29784949 | None:intergenic |
| CGATAAGACTGTAAATGATA+TGG | 0.371207 | 4.4:-29785041 | None:intergenic |
| AGCTTCAGCTCTGGTTGGCC+GGG | 0.390347 | 4.4:-29785802 | None:intergenic |
| TAGCTTCAGCTCTGGTTGGC+CGG | 0.391145 | 4.4:-29785803 | None:intergenic |
| CAAGGAAGATATCATGGCTT+GGG | 0.397205 | 4.4:+29785183 | MS.gene56459:CDS |
| CCTTTCCCTTGGCACATTGA+AGG | 0.403085 | 4.4:-29786307 | None:intergenic |
| GCTGAGAGCACCATTGACTA+TGG | 0.403578 | 4.4:+29785942 | MS.gene56459:CDS |
| GGAAAGGGACTCTGCGTTAA+CGG | 0.404260 | 4.4:+29786323 | MS.gene56459:CDS |
| CGCCGTCATGCTCGATACTA+AGG | 0.406356 | 4.4:+29783930 | MS.gene56459:CDS |
| TCAACTGACTATAGCCTAAA+GGG | 0.420476 | 4.4:+29784935 | MS.gene56459:CDS |
| CATGACGGCGCAGAGAATTC+CGG | 0.420747 | 4.4:-29783917 | None:intergenic |
| TTGTTTCAGTTGGATAGGTT+TGG | 0.435015 | 4.4:-29784894 | None:intergenic |
| TGCTAGAGCAGCTCTCATAT+TGG | 0.437951 | 4.4:+29786055 | MS.gene56459:CDS |
| AGATGTATTCAAAAGGATAA+TGG | 0.438677 | 4.4:+29785965 | MS.gene56459:CDS |
| GGAACGACAACAGAAAGAAT+TGG | 0.441249 | 4.4:-29786134 | None:intergenic |
| GCACGCTGGGACCCGCATCT+AGG | 0.445382 | 4.4:+29783770 | MS.gene56459:CDS |
| TTATCGTGTGACAAAGAATT+GGG | 0.446712 | 4.4:+29785058 | MS.gene56459:CDS |
| ACAGAAAGAATTGGCGTGCC+TGG | 0.449963 | 4.4:-29786125 | None:intergenic |
| GCGCTTTCATTTGTTCGAAA+AGG | 0.450686 | 4.4:+29785232 | MS.gene56459:CDS |
| CAAAATTGGTGGCTAAATAC+AGG | 0.450918 | 4.4:+29786102 | MS.gene56459:CDS |
| TTTCATTACCTTGTTTCAGT+TGG | 0.451778 | 4.4:-29784904 | None:intergenic |
| TTACCTTGTTTCAGTTGGAT+AGG | 0.452533 | 4.4:-29784899 | None:intergenic |
| TGTTCGAAAAGGTTCTGATC+TGG | 0.452582 | 4.4:+29785243 | MS.gene56459:CDS |
| TCCAATGGGCTCATGGGTAC+TGG | 0.457116 | 4.4:-29785996 | None:intergenic |
| TAACGACTGATACCTTTGAT+TGG | 0.457143 | 4.4:+29786162 | MS.gene56459:CDS |
| AGAAATCCAGTTCGAATCTC+AGG | 0.458723 | 4.4:-29784863 | None:intergenic |
| ACTAAGATCGTTTGCACGCT+GGG | 0.459837 | 4.4:+29783757 | MS.gene56459:CDS |
| GAGAGCTGCTCTAGCAGAGT+TGG | 0.462449 | 4.4:-29786048 | None:intergenic |
| CTTTCCCTTGGCACATTGAA+GGG | 0.463400 | 4.4:-29786306 | None:intergenic |
| ATTGTACGAACAGCAAGTTC+TGG | 0.463793 | 4.4:-29785900 | None:intergenic |
| GAATACATCTCCATAGTCAA+TGG | 0.466000 | 4.4:-29785952 | None:intergenic |
| AACGCAGAGTCCCTTTCCCT+TGG | 0.468309 | 4.4:-29786318 | None:intergenic |
| CGCAAAAGCTTCTCGACCAT+GGG | 0.471680 | 4.4:-29783799 | None:intergenic |
| TAGACTCTCCAATGGGCTCA+TGG | 0.478114 | 4.4:-29786003 | None:intergenic |
| TTGGCTCATGATGTGAAGCC+TGG | 0.480964 | 4.4:+29784992 | MS.gene56459:CDS |
| CAATTGGAATTTCCATTCCA+AGG | 0.480988 | 4.4:-29785677 | None:intergenic |
| GCTAGATTCAACTTCTCTCA+TGG | 0.485672 | 4.4:+29783838 | MS.gene56459:CDS |
| GTGTGACAAAGAATTGGGTT+TGG | 0.488491 | 4.4:+29785063 | MS.gene56459:CDS |
| GTGCAATATCCAAGGAAAAC+CGG | 0.489545 | 4.4:+29785737 | MS.gene56459:CDS |
| AGAAAGAATGTTAATCTGCC+TGG | 0.492316 | 4.4:+29785124 | MS.gene56459:CDS |
| AATATCAAGCTATGTCTAGC+AGG | 0.493341 | 4.4:-29786203 | None:intergenic |
| TAGGGGCCTGAGATTCGAAC+TGG | 0.499972 | 4.4:+29784857 | MS.gene56459:intron |
| CTTCAATGTGCCAAGGGAAA+GGG | 0.500302 | 4.4:+29786308 | MS.gene56459:CDS |
| TTCAACTGACTATAGCCTAA+AGG | 0.500418 | 4.4:+29784934 | MS.gene56459:CDS |
| CGTTAACGGGGATTCTGTTG+TGG | 0.503390 | 4.4:+29786337 | MS.gene56459:CDS |
| GCTTCAGCTCTGGTTGGCCG+GGG | 0.507929 | 4.4:-29785801 | None:intergenic |
| CGTTACTGCGACTCAGATGT+TGG | 0.507988 | 4.4:+29785761 | MS.gene56459:CDS |
| ATCTGAGTCGCAGTAACGAC+CGG | 0.509493 | 4.4:-29785756 | None:intergenic |
| GAAAGACAAGGAAGATATCA+TGG | 0.513280 | 4.4:+29785177 | MS.gene56459:CDS |
| TGGTTCTCATGAGTATCATC+AGG | 0.514740 | 4.4:+29783858 | MS.gene56459:CDS |
| CCTTCAATGTGCCAAGGGAA+AGG | 0.523286 | 4.4:+29786307 | MS.gene56459:CDS |
| ACAGACTGTGTCATGCTTAG+TGG | 0.525623 | 4.4:+29785855 | MS.gene56459:CDS |
| ACAAGGAAGATATCATGGCT+TGG | 0.526189 | 4.4:+29785182 | MS.gene56459:CDS |
| AAGGTATCAGTCGTTAGCTC+AGG | 0.530961 | 4.4:-29786155 | None:intergenic |
| CGCATCTAGGTCTATTCCCA+TGG | 0.531643 | 4.4:+29783783 | MS.gene56459:CDS |
| TGATAATCTTAGAGCTGCCA+TGG | 0.531806 | 4.4:+29783888 | MS.gene56459:CDS |
| AGTGTCATACTCTGCGCAGA+TGG | 0.532331 | 4.4:+29785016 | MS.gene56459:CDS |
| ACTATGGAGATGTATTCAAA+AGG | 0.538144 | 4.4:+29785958 | MS.gene56459:CDS |
| GGAAGATCCACTACGACTCC+AGG | 0.538876 | 4.4:-29785142 | None:intergenic |
| CTTGTCTTTCTCAGTCAAAG+TGG | 0.540820 | 4.4:-29785164 | None:intergenic |
| AACTAAGATCGTTTGCACGC+TGG | 0.542989 | 4.4:+29783756 | MS.gene56459:CDS |
| TCGCAAAAGCTTCTCGACCA+TGG | 0.546576 | 4.4:-29783800 | None:intergenic |
| CTTAGTGGTGAAACTGCTGC+TGG | 0.547208 | 4.4:+29785870 | MS.gene56459:CDS |
| AACATCAGTAGCTTCAGCTC+TGG | 0.547477 | 4.4:-29785811 | None:intergenic |
| GGCAGGTTGAAAACCAAGAA+GGG | 0.548016 | 4.4:+29785595 | MS.gene56459:intron |
| GAACATTCTTCTCATGTCAA+AGG | 0.556045 | 4.4:+29785300 | MS.gene56459:CDS |
| AGACTCTCCAATGGGCTCAT+GGG | 0.558290 | 4.4:-29786002 | None:intergenic |
| AGGGACTACTGCAAAATTGG+TGG | 0.560616 | 4.4:+29786091 | MS.gene56459:CDS |
| CTCATATTGGTTCTAACTAG+AGG | 0.560702 | 4.4:+29786068 | MS.gene56459:CDS |
| TTAATATTGGAATCAATCCT+CGG | 0.562918 | 4.4:-29786226 | None:intergenic |
| AGAGCTGCCATGGAGAATAC+CGG | 0.568658 | 4.4:+29783898 | MS.gene56459:CDS |
| ACCAGTACCCATGAGCCCAT+TGG | 0.569139 | 4.4:+29785995 | MS.gene56459:CDS |
| TTGTCTTTCTCAGTCAAAGT+GGG | 0.570627 | 4.4:-29785163 | None:intergenic |
| TTTAATGGGAGATCATTTCA+CGG | 0.575483 | 4.4:-29786402 | None:intergenic |
| GGCACGTGGTGACCTTGGAA+TGG | 0.579482 | 4.4:+29785665 | MS.gene56459:CDS |
| AAGAAGCTAGACTCTCCAAT+GGG | 0.579536 | 4.4:-29786010 | None:intergenic |
| TTGGTGGCTAAATACAGGCC+AGG | 0.581932 | 4.4:+29786107 | MS.gene56459:CDS |
| TGGCAGGTTGAAAACCAAGA+AGG | 0.582341 | 4.4:+29785594 | MS.gene56459:intron |
| ATATCAAGCTATGTCTAGCA+GGG | 0.582962 | 4.4:-29786202 | None:intergenic |
| TCAGTAGCTTCAGCTCTGGT+TGG | 0.584103 | 4.4:-29785807 | None:intergenic |
| TGTTGTGGTTCTGCATCGCG+TGG | 0.586595 | 4.4:+29786352 | MS.gene56459:CDS |
| GATTCGAACTGGATTTCTCA+AGG | 0.588567 | 4.4:+29784868 | MS.gene56459:CDS |
| ATTTGCCCTTCAATGTGCCA+AGG | 0.591498 | 4.4:+29786301 | MS.gene56459:CDS |
| TAAATGCATCAGAGTTTGCA+AGG | 0.592927 | 4.4:-29785638 | None:intergenic |
| ATGGTGGCACGTGGTGACCT+TGG | 0.597261 | 4.4:+29785660 | MS.gene56459:CDS |
| ATTTATAAGTGCAATATCCA+AGG | 0.598187 | 4.4:+29785729 | MS.gene56459:CDS |
| AGAACTTGCTGTTCGTACAA+TGG | 0.602563 | 4.4:+29785902 | MS.gene56459:CDS |
| AGACATAGCTTGATATTCCG+AGG | 0.602907 | 4.4:+29786209 | MS.gene56459:CDS |
| GCGCAGAGTATGACACTCCC+AGG | 0.606193 | 4.4:-29785010 | None:intergenic |
| ATATTGGTTCTAACTAGAGG+AGG | 0.607238 | 4.4:+29786071 | MS.gene56459:CDS |
| CACTTTGACTGAGAAAGACA+AGG | 0.607462 | 4.4:+29785165 | MS.gene56459:CDS |
| TGAGAAGAATGTTCTTAGCA+TGG | 0.609210 | 4.4:-29785291 | None:intergenic |
| TTTGCCCTTCAATGTGCCAA+GGG | 0.609763 | 4.4:+29786302 | MS.gene56459:CDS |
| GTTGCGAATGCAGTTCTGGA+TGG | 0.610844 | 4.4:+29785831 | MS.gene56459:CDS |
| GAGAATTCCGGTATTCTCCA+TGG | 0.611587 | 4.4:-29783905 | None:intergenic |
| ATCACTGCATGACCAATCAA+AGG | 0.619997 | 4.4:-29786174 | None:intergenic |
| GAAGAAGCTAGACTCTCCAA+TGG | 0.622268 | 4.4:-29786011 | None:intergenic |
| TGGCTCATGATGTGAAGCCT+GGG | 0.622471 | 4.4:+29784993 | MS.gene56459:CDS |
| TAATCTGCCTGGAGTCGTAG+TGG | 0.623976 | 4.4:+29785135 | MS.gene56459:CDS |
| ATGGGAATAGACCTAGATGC+GGG | 0.628393 | 4.4:-29783781 | None:intergenic |
| TATTGGTTCTAACTAGAGGA+GGG | 0.629589 | 4.4:+29786072 | MS.gene56459:CDS |
| AAACCTATCCAACTGAAACA+AGG | 0.639584 | 4.4:+29784896 | MS.gene56459:CDS |
| AAGGAAGATATCATGGCTTG+GGG | 0.639801 | 4.4:+29785184 | MS.gene56459:CDS |
| AGTCAATGATCAAATCTCCC+CGG | 0.646746 | 4.4:+29785784 | MS.gene56459:CDS |
| AAAGGGACTCTGCGTTAACG+GGG | 0.647503 | 4.4:+29786325 | MS.gene56459:CDS |
| GTTGTGGTTCTGCATCGCGT+GGG | 0.653541 | 4.4:+29786353 | MS.gene56459:CDS |
| GCAGGTTGAAAACCAAGAAG+GGG | 0.675723 | 4.4:+29785596 | MS.gene56459:intron |
| TACCTTAGTATCGAGCATGA+CGG | 0.683613 | 4.4:-29783932 | None:intergenic |
| CATGGGAATAGACCTAGATG+CGG | 0.689751 | 4.4:-29783782 | None:intergenic |
| AAACTCTGATGCATTTATGG+TGG | 0.705208 | 4.4:+29785644 | MS.gene56459:CDS |
| TATCAAGCTATGTCTAGCAG+GGG | 0.708675 | 4.4:-29786201 | None:intergenic |
| GATGCATTTATGGTGGCACG+TGG | 0.742236 | 4.4:+29785651 | MS.gene56459:CDS |
| GAACAGCAGAGTTCTCACAG+CGG | 0.862341 | 4.4:-29785093 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATAAATAAAATAAAAAA+AGG | - | chr4.4:29783963-29783982 | None:intergenic | 0.0% |
| !! | TACTTGATTCTTAATATTTA+TGG | + | chr4.4:29784683-29784702 | MS.gene56459:intron | 15.0% |
| !!! | CTGAAAATAATTTTTGTATT+TGG | + | chr4.4:29784362-29784381 | MS.gene56459:intron | 15.0% |
| !! | AATTCTTATCCATACATATA+AGG | - | chr4.4:29784125-29784144 | None:intergenic | 20.0% |
| !! | ATTAAGAATCAAGTAAAAAC+CGG | - | chr4.4:29784678-29784697 | None:intergenic | 20.0% |
| !! | TAAAAGAACTATAGTCTATT+TGG | - | chr4.4:29784615-29784634 | None:intergenic | 20.0% |
| ! | AAGAGATAGAAAAAATCAGT+AGG | - | chr4.4:29785512-29785531 | None:intergenic | 25.0% |
| ! | AGATGTATTCAAAAGGATAA+TGG | + | chr4.4:29785965-29785984 | MS.gene56459:CDS | 25.0% |
| ! | ATTTATAAGTGCAATATCCA+AGG | + | chr4.4:29785729-29785748 | MS.gene56459:CDS | 25.0% |
| ! | TGTTAGATTAGGTTATGTTT+GGG | + | chr4.4:29784199-29784218 | MS.gene56459:intron | 25.0% |
| ! | TTAATATTGGAATCAATCCT+CGG | - | chr4.4:29786229-29786248 | None:intergenic | 25.0% |
| ! | TTACAATACTCACCAAAATA+AGG | - | chr4.4:29784716-29784735 | None:intergenic | 25.0% |
| !! | GCAATCATGTCAATTTTATT+GGG | - | chr4.4:29785214-29785233 | None:intergenic | 25.0% |
| !! | TTTTATAAGATGTCTTAGAG+AGG | + | chr4.4:29784326-29784345 | MS.gene56459:intron | 25.0% |
| !!! | TATGGTTTAGAACCTTATTT+TGG | + | chr4.4:29784701-29784720 | MS.gene56459:intron | 25.0% |
| !!! | TATTAAGAGAGTTTTAGTTG+CGG | - | chr4.4:29784761-29784780 | None:intergenic | 25.0% |
| !!! | TGATTTTGACCTTATATGTA+TGG | + | chr4.4:29784113-29784132 | MS.gene56459:intron | 25.0% |
| ACAGTTCAAACATGTATTGA+CGG | - | chr4.4:29784182-29784201 | None:intergenic | 30.0% | |
| ACTATGGAGATGTATTCAAA+AGG | + | chr4.4:29785958-29785977 | MS.gene56459:CDS | 30.0% | |
| CATGTTTGAACTGTTAGATT+AGG | + | chr4.4:29784188-29784207 | MS.gene56459:intron | 30.0% | |
| CGATAAGACTGTAAATGATA+TGG | - | chr4.4:29785044-29785063 | None:intergenic | 30.0% | |
| CGGTAAAAGTCACTATTAAT+CGG | - | chr4.4:29784162-29784181 | None:intergenic | 30.0% | |
| CTGTTAGATTAGGTTATGTT+TGG | + | chr4.4:29784198-29784217 | MS.gene56459:intron | 30.0% | |
| TGTTTCATGCAAGTTATTAG+CGG | + | chr4.4:29784302-29784321 | MS.gene56459:intron | 30.0% | |
| TTATCGTGTGACAAAGAATT+GGG | + | chr4.4:29785058-29785077 | MS.gene56459:CDS | 30.0% | |
| TTCACGTTAATGTGTGTTAT+TGG | + | chr4.4:29785434-29785453 | MS.gene56459:intron | 30.0% | |
| ! | CGCAATCATGTCAATTTTAT+TGG | - | chr4.4:29785215-29785234 | None:intergenic | 30.0% |
| ! | GCGAGAAATATTTTCTCAAT+TGG | - | chr4.4:29785696-29785715 | None:intergenic | 30.0% |
| ! | TTTCATTACCTTGTTTCAGT+TGG | - | chr4.4:29784907-29784926 | None:intergenic | 30.0% |
| !! | ATAAAAGCATCTTCAATGTC+CGG | + | chr4.4:29784656-29784675 | MS.gene56459:intron | 30.0% |
| !! | CAAGATTTTGATGATTGATG+CGG | - | chr4.4:29786381-29786400 | None:intergenic | 30.0% |
| AAACCTATCCAACTGAAACA+AGG | + | chr4.4:29784896-29784915 | MS.gene56459:CDS | 35.0% | |
| AAACTCTGATGCATTTATGG+TGG | + | chr4.4:29785644-29785663 | MS.gene56459:CDS | 35.0% | |
| AAGATGTCTTAGAGAGGTTA+TGG | + | chr4.4:29784332-29784351 | MS.gene56459:intron | 35.0% | |
| AATATCAAGCTATGTCTAGC+AGG | - | chr4.4:29786206-29786225 | None:intergenic | 35.0% | |
| AGAAAGAATGTTAATCTGCC+TGG | + | chr4.4:29785124-29785143 | MS.gene56459:CDS | 35.0% | |
| ATATCAAGCTATGTCTAGCA+GGG | - | chr4.4:29786205-29786224 | None:intergenic | 35.0% | |
| ATGAAGCAACTTGAAAATGC+TGG | - | chr4.4:29784792-29784811 | None:intergenic | 35.0% | |
| CAATTGGAATTTCCATTCCA+AGG | - | chr4.4:29785680-29785699 | None:intergenic | 35.0% | |
| CTTATCGTGTGACAAAGAAT+TGG | + | chr4.4:29785057-29785076 | MS.gene56459:CDS | 35.0% | |
| GAAAGACAAGGAAGATATCA+TGG | + | chr4.4:29785177-29785196 | MS.gene56459:CDS | 35.0% | |
| GAACATTCTTCTCATGTCAA+AGG | + | chr4.4:29785300-29785319 | MS.gene56459:CDS | 35.0% | |
| GAATACATCTCCATAGTCAA+TGG | - | chr4.4:29785955-29785974 | None:intergenic | 35.0% | |
| GTACAAGTTCGAAAACTTCT+AGG | + | chr4.4:29785265-29785284 | MS.gene56459:CDS | 35.0% | |
| TAAATGCATCAGAGTTTGCA+AGG | - | chr4.4:29785641-29785660 | None:intergenic | 35.0% | |
| TAACGACTGATACCTTTGAT+TGG | + | chr4.4:29786162-29786181 | MS.gene56459:CDS | 35.0% | |
| TCAACTGACTATAGCCTAAA+GGG | + | chr4.4:29784935-29784954 | MS.gene56459:CDS | 35.0% | |
| TGAGAAGAATGTTCTTAGCA+TGG | - | chr4.4:29785294-29785313 | None:intergenic | 35.0% | |
| TGCAAACTCTGATGCATTTA+TGG | + | chr4.4:29785641-29785660 | MS.gene56459:CDS | 35.0% | |
| TTACATTGCTCATTGCTGTA+GGG | + | chr4.4:29784839-29784858 | MS.gene56459:intron | 35.0% | |
| TTCAACTGACTATAGCCTAA+AGG | + | chr4.4:29784934-29784953 | MS.gene56459:CDS | 35.0% | |
| TTGTATTCTCATCACCCTTT+AGG | - | chr4.4:29784952-29784971 | None:intergenic | 35.0% | |
| TTGTCTTTCTCAGTCAAAGT+GGG | - | chr4.4:29785166-29785185 | None:intergenic | 35.0% | |
| TTGTTTCAGTTGGATAGGTT+TGG | - | chr4.4:29784897-29784916 | None:intergenic | 35.0% | |
| ! | CAAAATTGGTGGCTAAATAC+AGG | + | chr4.4:29786102-29786121 | MS.gene56459:CDS | 35.0% |
| ! | TGGTGAGTATTGTAATTCGA+GGG | + | chr4.4:29784721-29784740 | MS.gene56459:intron | 35.0% |
| ! | TTACCTTGTTTCAGTTGGAT+AGG | - | chr4.4:29784902-29784921 | None:intergenic | 35.0% |
| ! | TTGGTGAGTATTGTAATTCG+AGG | + | chr4.4:29784720-29784739 | MS.gene56459:intron | 35.0% |
| !! | ATATTGGTTCTAACTAGAGG+AGG | + | chr4.4:29786071-29786090 | MS.gene56459:CDS | 35.0% |
| !! | CTCATATTGGTTCTAACTAG+AGG | + | chr4.4:29786068-29786087 | MS.gene56459:CDS | 35.0% |
| !! | GTGCAAACGATCTTAGTTTT+GGG | - | chr4.4:29783754-29783773 | None:intergenic | 35.0% |
| !! | TATTGGTTCTAACTAGAGGA+GGG | + | chr4.4:29786072-29786091 | MS.gene56459:CDS | 35.0% |
| AACTTGCAAATGTATGTGGC+AGG | + | chr4.4:29785578-29785597 | MS.gene56459:intron | 40.0% | |
| AAGAAGCTAGACTCTCCAAT+GGG | - | chr4.4:29786013-29786032 | None:intergenic | 40.0% | |
| AAGGAAGATATCATGGCTTG+GGG | + | chr4.4:29785184-29785203 | MS.gene56459:CDS | 40.0% | |
| ACAAGGAAGATATCATGGCT+TGG | + | chr4.4:29785182-29785201 | MS.gene56459:CDS | 40.0% | |
| AGAAATCCAGTTCGAATCTC+AGG | - | chr4.4:29784866-29784885 | None:intergenic | 40.0% | |
| AGACATAGCTTGATATTCCG+AGG | + | chr4.4:29786209-29786228 | MS.gene56459:CDS | 40.0% | |
| AGTCAATGATCAAATCTCCC+CGG | + | chr4.4:29785784-29785803 | MS.gene56459:CDS | 40.0% | |
| ATCACTGCATGACCAATCAA+AGG | - | chr4.4:29786177-29786196 | None:intergenic | 40.0% | |
| ATTGTACGAACAGCAAGTTC+TGG | - | chr4.4:29785903-29785922 | None:intergenic | 40.0% | |
| CAAGGAAGATATCATGGCTT+GGG | + | chr4.4:29785183-29785202 | MS.gene56459:CDS | 40.0% | |
| CACTTTGACTGAGAAAGACA+AGG | + | chr4.4:29785165-29785184 | MS.gene56459:CDS | 40.0% | |
| CATACATTTGCAAGTTGCAG+AGG | - | chr4.4:29785574-29785593 | None:intergenic | 40.0% | |
| CTCCATGAGCTACAAAAAGT+TGG | + | chr4.4:29784973-29784992 | MS.gene56459:CDS | 40.0% | |
| CTGCAACTTGCAAATGTATG+TGG | + | chr4.4:29785574-29785593 | MS.gene56459:intron | 40.0% | |
| CTTACATTGCTCATTGCTGT+AGG | + | chr4.4:29784838-29784857 | MS.gene56459:intron | 40.0% | |
| CTTGTCTTTCTCAGTCAAAG+TGG | - | chr4.4:29785167-29785186 | None:intergenic | 40.0% | |
| GATTCGAACTGGATTTCTCA+AGG | + | chr4.4:29784868-29784887 | MS.gene56459:CDS | 40.0% | |
| GCAGAAGCAGCACTTAATAT+TGG | - | chr4.4:29786242-29786261 | None:intergenic | 40.0% | |
| GCGCTTTCATTTGTTCGAAA+AGG | + | chr4.4:29785232-29785251 | MS.gene56459:CDS | 40.0% | |
| GCTAGATTCAACTTCTCTCA+TGG | + | chr4.4:29783838-29783857 | MS.gene56459:CDS | 40.0% | |
| GGAACGACAACAGAAAGAAT+TGG | - | chr4.4:29786137-29786156 | None:intergenic | 40.0% | |
| GTGCAATATCCAAGGAAAAC+CGG | + | chr4.4:29785737-29785756 | MS.gene56459:CDS | 40.0% | |
| GTGTGACAAAGAATTGGGTT+TGG | + | chr4.4:29785063-29785082 | MS.gene56459:CDS | 40.0% | |
| TACATTGCTCATTGCTGTAG+GGG | + | chr4.4:29784840-29784859 | MS.gene56459:intron | 40.0% | |
| TATCAAGCTATGTCTAGCAG+GGG | - | chr4.4:29786204-29786223 | None:intergenic | 40.0% | |
| TGATAATCTTAGAGCTGCCA+TGG | + | chr4.4:29783888-29783907 | MS.gene56459:CDS | 40.0% | |
| TGGTTCTCATGAGTATCATC+AGG | + | chr4.4:29783858-29783877 | MS.gene56459:CDS | 40.0% | |
| ! | AGCCAACTTTTTGTAGCTCA+TGG | - | chr4.4:29784978-29784997 | None:intergenic | 40.0% |
| ! | CGTGCAAACGATCTTAGTTT+TGG | - | chr4.4:29783755-29783774 | None:intergenic | 40.0% |
| ! | TACCTTAGTATCGAGCATGA+CGG | - | chr4.4:29783935-29783954 | None:intergenic | 40.0% |
| ! | TGTTCGAAAAGGTTCTGATC+TGG | + | chr4.4:29785243-29785262 | MS.gene56459:CDS | 40.0% |
| !! | AGAACTTGCTGTTCGTACAA+TGG | + | chr4.4:29785902-29785921 | MS.gene56459:CDS | 40.0% |
| AACATCAGTAGCTTCAGCTC+TGG | - | chr4.4:29785814-29785833 | None:intergenic | 45.0% | |
| AACTAAGATCGTTTGCACGC+TGG | + | chr4.4:29783756-29783775 | MS.gene56459:CDS | 45.0% | |
| ACAGACTGTGTCATGCTTAG+TGG | + | chr4.4:29785855-29785874 | MS.gene56459:CDS | 45.0% | |
| ACTAAGATCGTTTGCACGCT+GGG | + | chr4.4:29783757-29783776 | MS.gene56459:CDS | 45.0% | |
| AGGAGGGACTACTGCAAAAT+TGG | + | chr4.4:29786088-29786107 | MS.gene56459:CDS | 45.0% | |
| AGGGACTACTGCAAAATTGG+TGG | + | chr4.4:29786091-29786110 | MS.gene56459:CDS | 45.0% | |
| ATGGGAATAGACCTAGATGC+GGG | - | chr4.4:29783784-29783803 | None:intergenic | 45.0% | |
| ATTTGCCCTTCAATGTGCCA+AGG | + | chr4.4:29786301-29786320 | MS.gene56459:CDS | 45.0% | |
| CAAAGTTTGCAACCCCTTCT+TGG | - | chr4.4:29785611-29785630 | None:intergenic | 45.0% | |
| CATGGGAATAGACCTAGATG+CGG | - | chr4.4:29783785-29783804 | None:intergenic | 45.0% | |
| CTTCAATGTGCCAAGGGAAA+GGG | + | chr4.4:29786308-29786327 | MS.gene56459:CDS | 45.0% | |
| CTTTCCCTTGGCACATTGAA+GGG | - | chr4.4:29786309-29786328 | None:intergenic | 45.0% | |
| GAAGAAGCTAGACTCTCCAA+TGG | - | chr4.4:29786014-29786033 | None:intergenic | 45.0% | |
| GAGAATTCCGGTATTCTCCA+TGG | - | chr4.4:29783908-29783927 | None:intergenic | 45.0% | |
| TGATGTTGCGAATGCAGTTC+TGG | + | chr4.4:29785827-29785846 | MS.gene56459:CDS | 45.0% | |
| TGCTAGAGCAGCTCTCATAT+TGG | + | chr4.4:29786055-29786074 | MS.gene56459:CDS | 45.0% | |
| TGTGAGAACTCTGCTGTTCT+AGG | + | chr4.4:29785097-29785116 | MS.gene56459:CDS | 45.0% | |
| TTTGCCCTTCAATGTGCCAA+GGG | + | chr4.4:29786302-29786321 | MS.gene56459:CDS | 45.0% | |
| ! | AAGGTATCAGTCGTTAGCTC+AGG | - | chr4.4:29786158-29786177 | None:intergenic | 45.0% |
| ! | GCAGGTTGAAAACCAAGAAG+GGG | + | chr4.4:29785596-29785615 | MS.gene56459:intron | 45.0% |
| ! | GGCAGGTTGAAAACCAAGAA+GGG | + | chr4.4:29785595-29785614 | MS.gene56459:intron | 45.0% |
| ! | TGGCAGGTTGAAAACCAAGA+AGG | + | chr4.4:29785594-29785613 | MS.gene56459:intron | 45.0% |
| !!! | ATTTTTTATTATTTTTTTCA+TGG | + | chr4.4:29785338-29785357 | MS.gene56459:intron | 5.0% |
| AAAGGGACTCTGCGTTAACG+GGG | + | chr4.4:29786325-29786344 | MS.gene56459:CDS | 50.0% | |
| ACAGAAAGAATTGGCGTGCC+TGG | - | chr4.4:29786128-29786147 | None:intergenic | 50.0% | |
| AGAGCTGCCATGGAGAATAC+CGG | + | chr4.4:29783898-29783917 | MS.gene56459:CDS | 50.0% | |
| AGTGTCATACTCTGCGCAGA+TGG | + | chr4.4:29785016-29785035 | MS.gene56459:CDS | 50.0% | |
| ATCTGAGTCGCAGTAACGAC+CGG | - | chr4.4:29785759-29785778 | None:intergenic | 50.0% | |
| CCTTCAATGTGCCAAGGGAA+AGG | + | chr4.4:29786307-29786326 | MS.gene56459:CDS | 50.0% | |
| CCTTTCCCTTGGCACATTGA+AGG | - | chr4.4:29786310-29786329 | None:intergenic | 50.0% | |
| CGCAAAAGCTTCTCGACCAT+GGG | - | chr4.4:29783802-29783821 | None:intergenic | 50.0% | |
| CGCATCTAGGTCTATTCCCA+TGG | + | chr4.4:29783783-29783802 | MS.gene56459:CDS | 50.0% | |
| CGTTAACGGGGATTCTGTTG+TGG | + | chr4.4:29786337-29786356 | MS.gene56459:CDS | 50.0% | |
| CGTTACTGCGACTCAGATGT+TGG | + | chr4.4:29785761-29785780 | MS.gene56459:CDS | 50.0% | |
| CTTAGTGGTGAAACTGCTGC+TGG | + | chr4.4:29785870-29785889 | MS.gene56459:CDS | 50.0% | |
| GAAAGGGACTCTGCGTTAAC+GGG | + | chr4.4:29786324-29786343 | MS.gene56459:CDS | 50.0% | |
| GAACAGCAGAGTTCTCACAG+CGG | - | chr4.4:29785096-29785115 | None:intergenic | 50.0% | |
| GATGCATTTATGGTGGCACG+TGG | + | chr4.4:29785651-29785670 | MS.gene56459:CDS | 50.0% | |
| GGAAAGGGACTCTGCGTTAA+CGG | + | chr4.4:29786323-29786342 | MS.gene56459:CDS | 50.0% | |
| TAATCTGCCTGGAGTCGTAG+TGG | + | chr4.4:29785135-29785154 | MS.gene56459:CDS | 50.0% | |
| TCGCAAAAGCTTCTCGACCA+TGG | - | chr4.4:29783803-29783822 | None:intergenic | 50.0% | |
| TGGCTCATGATGTGAAGCCT+GGG | + | chr4.4:29784993-29785012 | MS.gene56459:CDS | 50.0% | |
| TTGGCTCATGATGTGAAGCC+TGG | + | chr4.4:29784992-29785011 | MS.gene56459:CDS | 50.0% | |
| ! | AGACTCTCCAATGGGCTCAT+GGG | - | chr4.4:29786005-29786024 | None:intergenic | 50.0% |
| ! | TAGACTCTCCAATGGGCTCA+TGG | - | chr4.4:29786006-29786025 | None:intergenic | 50.0% |
| ! | TCAGTAGCTTCAGCTCTGGT+TGG | - | chr4.4:29785810-29785829 | None:intergenic | 50.0% |
| ! | TTGGTGGCTAAATACAGGCC+AGG | + | chr4.4:29786107-29786126 | MS.gene56459:CDS | 50.0% |
| !! | CAGTAACGACCGGTTTTCCT+TGG | - | chr4.4:29785749-29785768 | None:intergenic | 50.0% |
| !! | GCTGAGAGCACCATTGACTA+TGG | + | chr4.4:29785942-29785961 | MS.gene56459:CDS | 50.0% |
| !! | GTTGCGAATGCAGTTCTGGA+TGG | + | chr4.4:29785831-29785850 | MS.gene56459:CDS | 50.0% |
| AACGCAGAGTCCCTTTCCCT+TGG | - | chr4.4:29786321-29786340 | None:intergenic | 55.0% | |
| ACCAGTACCCATGAGCCCAT+TGG | + | chr4.4:29785995-29786014 | MS.gene56459:CDS | 55.0% | |
| CATGACGGCGCAGAGAATTC+CGG | - | chr4.4:29783920-29783939 | None:intergenic | 55.0% | |
| CGCCGTCATGCTCGATACTA+AGG | + | chr4.4:29783930-29783949 | MS.gene56459:CDS | 55.0% | |
| GAGAGCTGCTCTAGCAGAGT+TGG | - | chr4.4:29786051-29786070 | None:intergenic | 55.0% | |
| GGAAGATCCACTACGACTCC+AGG | - | chr4.4:29785145-29785164 | None:intergenic | 55.0% | |
| TAGGGGCCTGAGATTCGAAC+TGG | + | chr4.4:29784857-29784876 | MS.gene56459:intron | 55.0% | |
| ! | GTCGAGAAGCTTTTGCGAGC+AGG | + | chr4.4:29783805-29783824 | MS.gene56459:CDS | 55.0% |
| ! | GTTGTGGTTCTGCATCGCGT+GGG | + | chr4.4:29786353-29786372 | MS.gene56459:CDS | 55.0% |
| ! | TAGCTTCAGCTCTGGTTGGC+CGG | - | chr4.4:29785806-29785825 | None:intergenic | 55.0% |
| ! | TCCAATGGGCTCATGGGTAC+TGG | - | chr4.4:29785999-29786018 | None:intergenic | 55.0% |
| ! | TGTTGTGGTTCTGCATCGCG+TGG | + | chr4.4:29786352-29786371 | MS.gene56459:CDS | 55.0% |
| ATGGTGGCACGTGGTGACCT+TGG | + | chr4.4:29785660-29785679 | MS.gene56459:CDS | 60.0% | |
| GCGCAGAGTATGACACTCCC+AGG | - | chr4.4:29785013-29785032 | None:intergenic | 60.0% | |
| GGCACGTGGTGACCTTGGAA+TGG | + | chr4.4:29785665-29785684 | MS.gene56459:CDS | 60.0% | |
| ! | AGCTTCAGCTCTGGTTGGCC+GGG | - | chr4.4:29785805-29785824 | None:intergenic | 60.0% |
| ! | GCTTCAGCTCTGGTTGGCCG+GGG | - | chr4.4:29785804-29785823 | None:intergenic | 65.0% |
| GCACGCTGGGACCCGCATCT+AGG | + | chr4.4:29783770-29783789 | MS.gene56459:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 29783724 | 29786412 | 29783724 | ID=MS.gene56459 |
| chr4.4 | mRNA | 29783724 | 29786412 | 29783724 | ID=MS.gene56459.t1;Parent=MS.gene56459 |
| chr4.4 | exon | 29783724 | 29783951 | 29783724 | ID=MS.gene56459.t1.exon1;Parent=MS.gene56459.t1 |
| chr4.4 | CDS | 29783724 | 29783951 | 29783724 | ID=cds.MS.gene56459.t1;Parent=MS.gene56459.t1 |
| chr4.4 | exon | 29784860 | 29785321 | 29784860 | ID=MS.gene56459.t1.exon2;Parent=MS.gene56459.t1 |
| chr4.4 | CDS | 29784860 | 29785321 | 29784860 | ID=cds.MS.gene56459.t1;Parent=MS.gene56459.t1 |
| chr4.4 | exon | 29785600 | 29786412 | 29785600 | ID=MS.gene56459.t1.exon3;Parent=MS.gene56459.t1 |
| chr4.4 | CDS | 29785600 | 29786412 | 29785600 | ID=cds.MS.gene56459.t1;Parent=MS.gene56459.t1 |
| Gene Sequence |
| Protein sequence |
