Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene21480.t1 | RHN53851.1 | 93.7 | 557 | 21 | 4 | 1 | 552 | 1 | 548 | 1.70E-287 | 998 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene21480.t1 | Q40546 | 73.3 | 543 | 134 | 2 | 19 | 550 | 18 | 560 | 7.5e-220 | 764.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene21480.t1 | A0A396HMX9 | 93.7 | 557 | 21 | 4 | 1 | 552 | 1 | 548 | 1.2e-287 | 998.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049257 | MS.gene21480 | 0.802573 | 5.26E-49 | -1.69E-46 |
MS.gene049318 | MS.gene21480 | 0.805478 | 1.31E-49 | -1.69E-46 |
MS.gene050315 | MS.gene21480 | 0.847542 | 1.08E-59 | -1.69E-46 |
MS.gene050811 | MS.gene21480 | -0.815804 | 7.66E-52 | -1.69E-46 |
MS.gene051208 | MS.gene21480 | 0.832169 | 1.10E-55 | -1.69E-46 |
MS.gene051525 | MS.gene21480 | 0.845707 | 3.43E-59 | -1.69E-46 |
MS.gene051552 | MS.gene21480 | -0.803625 | 3.19E-49 | -1.69E-46 |
MS.gene051838 | MS.gene21480 | 0.801579 | 8.42E-49 | -1.69E-46 |
MS.gene052011 | MS.gene21480 | -0.810794 | 9.65E-51 | -1.69E-46 |
MS.gene052134 | MS.gene21480 | 0.8072 | 5.68E-50 | -1.69E-46 |
MS.gene052501 | MS.gene21480 | 0.806711 | 7.20E-50 | -1.69E-46 |
MS.gene052505 | MS.gene21480 | 0.80916 | 2.17E-50 | -1.69E-46 |
MS.gene052589 | MS.gene21480 | 0.818136 | 2.29E-52 | -1.69E-46 |
MS.gene052982 | MS.gene21480 | 0.823394 | 1.42E-53 | -1.69E-46 |
MS.gene053330 | MS.gene21480 | 0.853951 | 1.70E-61 | -1.69E-46 |
MS.gene054102 | MS.gene21480 | 0.809479 | 1.85E-50 | -1.69E-46 |
MS.gene054107 | MS.gene21480 | 0.805368 | 1.38E-49 | -1.69E-46 |
MS.gene054110 | MS.gene21480 | 0.801435 | 9.01E-49 | -1.69E-46 |
MS.gene054344 | MS.gene21480 | 0.802784 | 4.76E-49 | -1.69E-46 |
MS.gene054719 | MS.gene21480 | 0.806549 | 7.80E-50 | -1.69E-46 |
MS.gene054927 | MS.gene21480 | 0.804664 | 1.94E-49 | -1.69E-46 |
MS.gene055370 | MS.gene21480 | 0.845566 | 3.75E-59 | -1.69E-46 |
MS.gene055488 | MS.gene21480 | -0.803165 | 3.97E-49 | -1.69E-46 |
MS.gene055539 | MS.gene21480 | 0.806851 | 6.73E-50 | -1.69E-46 |
MS.gene056351 | MS.gene21480 | 0.853491 | 2.31E-61 | -1.69E-46 |
MS.gene056442 | MS.gene21480 | 0.809526 | 1.81E-50 | -1.69E-46 |
MS.gene056633 | MS.gene21480 | 0.837582 | 4.78E-57 | -1.69E-46 |
MS.gene056877 | MS.gene21480 | 0.843434 | 1.40E-58 | -1.69E-46 |
MS.gene057048 | MS.gene21480 | 0.803317 | 3.69E-49 | -1.69E-46 |
MS.gene057196 | MS.gene21480 | 0.839817 | 1.26E-57 | -1.69E-46 |
MS.gene057332 | MS.gene21480 | 0.811675 | 6.22E-51 | -1.69E-46 |
MS.gene057658 | MS.gene21480 | 0.806204 | 9.22E-50 | -1.69E-46 |
MS.gene058444 | MS.gene21480 | 0.824482 | 7.88E-54 | -1.69E-46 |
MS.gene058746 | MS.gene21480 | 0.825304 | 5.04E-54 | -1.69E-46 |
MS.gene058752 | MS.gene21480 | 0.80936 | 1.97E-50 | -1.69E-46 |
MS.gene059303 | MS.gene21480 | 0.852554 | 4.28E-61 | -1.69E-46 |
MS.gene059512 | MS.gene21480 | 0.853424 | 2.41E-61 | -1.69E-46 |
MS.gene059683 | MS.gene21480 | 0.879023 | 1.75E-69 | -1.69E-46 |
MS.gene060485 | MS.gene21480 | 0.811093 | 8.32E-51 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene21480 | MS.gene062243 | PPI |
MS.gene21480 | MS.gene56458 | PPI |
MS.gene21480 | MS.gene82397 | PPI |
MS.gene21480 | MS.gene065294 | PPI |
MS.gene21480 | MS.gene006867 | PPI |
MS.gene21480 | MS.gene020572 | PPI |
MS.gene21480 | MS.gene004893 | PPI |
MS.gene21480 | MS.gene22462 | PPI |
MS.gene21480 | MS.gene007459 | PPI |
MS.gene21480 | MS.gene47368 | PPI |
MS.gene21480 | MS.gene053108 | PPI |
MS.gene21480 | MS.gene019892 | PPI |
MS.gene21480 | MS.gene82768 | PPI |
MS.gene67287 | MS.gene21480 | PPI |
MS.gene21480 | MS.gene07416 | PPI |
MS.gene21480 | MS.gene032695 | PPI |
MS.gene21480 | MS.gene006203 | PPI |
MS.gene21480 | MS.gene20039 | PPI |
MS.gene21480 | MS.gene065645 | PPI |
MS.gene21480 | MS.gene034948 | PPI |
MS.gene21480 | MS.gene60646 | PPI |
MS.gene49179 | MS.gene21480 | PPI |
MS.gene21480 | MS.gene007327 | PPI |
MS.gene21480 | MS.gene56459 | PPI |
MS.gene21480 | MS.gene82398 | PPI |
MS.gene21480 | MS.gene74717 | PPI |
MS.gene21480 | MS.gene09810 | PPI |
MS.gene21480 | MS.gene85589 | PPI |
MS.gene21480 | MS.gene066245 | PPI |
MS.gene21480 | MS.gene007617 | PPI |
MS.gene21480 | MS.gene006868 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene21480.t1 | MTR_5g014140 | 92.460 | 557 | 28 | 3 | 1 | 552 | 1 | 548 | 0.0 | 1036 |
MS.gene21480.t1 | MTR_6g034195 | 70.876 | 491 | 135 | 2 | 66 | 551 | 88 | 575 | 0.0 | 722 |
MS.gene21480.t1 | MTR_1g099360 | 73.248 | 471 | 121 | 1 | 85 | 550 | 102 | 572 | 0.0 | 721 |
MS.gene21480.t1 | MTR_5g014140 | 90.370 | 405 | 22 | 4 | 1 | 397 | 1 | 396 | 0.0 | 719 |
MS.gene21480.t1 | MTR_1g076540 | 43.277 | 476 | 243 | 8 | 87 | 536 | 90 | 564 | 3.13e-117 | 358 |
MS.gene21480.t1 | MTR_1g105965 | 40.779 | 488 | 261 | 10 | 87 | 550 | 91 | 574 | 5.08e-106 | 330 |
MS.gene21480.t1 | MTR_4g083340 | 37.905 | 401 | 234 | 7 | 82 | 468 | 3 | 402 | 5.00e-83 | 267 |
MS.gene21480.t1 | MTR_6g004020 | 36.000 | 475 | 266 | 11 | 87 | 526 | 21 | 492 | 4.31e-81 | 263 |
MS.gene21480.t1 | MTR_7g100760 | 37.811 | 402 | 231 | 8 | 83 | 468 | 7 | 405 | 1.05e-80 | 261 |
MS.gene21480.t1 | MTR_4g083330 | 36.765 | 408 | 216 | 9 | 82 | 475 | 6 | 385 | 8.36e-75 | 245 |
MS.gene21480.t1 | MTR_1g105965 | 44.224 | 303 | 153 | 6 | 87 | 374 | 91 | 392 | 6.23e-74 | 241 |
MS.gene21480.t1 | MTR_1g091040 | 28.713 | 404 | 263 | 10 | 88 | 469 | 30 | 430 | 8.22e-43 | 160 |
MS.gene21480.t1 | MTR_7g103420 | 26.980 | 404 | 271 | 9 | 88 | 469 | 30 | 431 | 8.02e-40 | 152 |
MS.gene21480.t1 | MTR_7g103420 | 26.980 | 404 | 271 | 9 | 88 | 469 | 30 | 431 | 9.83e-40 | 152 |
MS.gene21480.t1 | MTR_1g061630 | 28.398 | 412 | 239 | 13 | 88 | 469 | 30 | 415 | 1.21e-39 | 151 |
MS.gene21480.t1 | MTR_1g061630 | 28.266 | 421 | 244 | 13 | 88 | 469 | 30 | 431 | 1.70e-39 | 151 |
MS.gene21480.t1 | MTR_1g105965 | 38.679 | 212 | 115 | 5 | 87 | 284 | 91 | 301 | 4.47e-37 | 139 |
MS.gene21480.t1 | MTR_1g091040 | 30.249 | 281 | 170 | 7 | 207 | 469 | 25 | 297 | 1.62e-28 | 117 |
MS.gene21480.t1 | MTR_7g103420 | 25.656 | 343 | 232 | 8 | 149 | 469 | 1 | 342 | 1.51e-27 | 115 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene21480.t1 | AT1G32440 | 77.426 | 474 | 101 | 2 | 82 | 550 | 95 | 567 | 0.0 | 760 |
MS.gene21480.t1 | AT5G52920 | 73.036 | 471 | 122 | 1 | 85 | 550 | 109 | 579 | 0.0 | 729 |
MS.gene21480.t1 | AT3G22960 | 43.038 | 474 | 245 | 9 | 87 | 536 | 118 | 590 | 4.18e-112 | 346 |
MS.gene21480.t1 | AT5G56350 | 37.653 | 409 | 236 | 7 | 83 | 475 | 5 | 410 | 4.63e-84 | 270 |
MS.gene21480.t1 | AT4G26390 | 36.117 | 443 | 249 | 9 | 83 | 495 | 4 | 442 | 1.70e-83 | 269 |
MS.gene21480.t1 | AT5G63680 | 36.383 | 481 | 267 | 11 | 82 | 526 | 15 | 492 | 2.18e-83 | 269 |
MS.gene21480.t1 | AT5G63680 | 36.383 | 481 | 267 | 11 | 82 | 526 | 15 | 492 | 2.18e-83 | 269 |
MS.gene21480.t1 | AT5G63680 | 36.383 | 481 | 267 | 11 | 82 | 526 | 15 | 492 | 2.18e-83 | 269 |
MS.gene21480.t1 | AT3G55650 | 37.438 | 406 | 237 | 7 | 85 | 475 | 15 | 418 | 3.89e-81 | 263 |
MS.gene21480.t1 | AT5G08570 | 35.430 | 477 | 266 | 11 | 87 | 526 | 21 | 492 | 4.47e-81 | 263 |
MS.gene21480.t1 | AT5G08570 | 35.430 | 477 | 266 | 11 | 87 | 526 | 21 | 492 | 4.47e-81 | 263 |
MS.gene21480.t1 | AT5G08570 | 35.430 | 477 | 266 | 11 | 87 | 526 | 21 | 492 | 4.47e-81 | 263 |
MS.gene21480.t1 | AT3G25960 | 34.335 | 466 | 281 | 8 | 85 | 526 | 15 | 479 | 1.56e-80 | 261 |
MS.gene21480.t1 | AT3G04050 | 31.809 | 481 | 286 | 9 | 85 | 526 | 15 | 492 | 1.59e-74 | 246 |
MS.gene21480.t1 | AT3G55810 | 33.898 | 413 | 226 | 9 | 85 | 476 | 15 | 401 | 3.43e-65 | 220 |
MS.gene21480.t1 | AT3G52990 | 26.844 | 488 | 300 | 16 | 88 | 531 | 30 | 504 | 3.90e-41 | 156 |
MS.gene21480.t1 | AT2G36580 | 26.585 | 489 | 300 | 15 | 88 | 531 | 30 | 504 | 2.54e-39 | 150 |
MS.gene21480.t1 | AT3G52990 | 26.293 | 464 | 285 | 16 | 112 | 531 | 1 | 451 | 7.16e-36 | 140 |
MS.gene21480.t1 | AT3G49160 | 30.568 | 229 | 136 | 7 | 195 | 407 | 473 | 694 | 7.22e-18 | 87.8 |
MS.gene21480.t1 | AT3G49160 | 30.568 | 229 | 136 | 7 | 195 | 407 | 385 | 606 | 1.03e-17 | 87.0 |
Find 119 sgRNAs with CRISPR-Local
Find 326 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACAAACTCTTCTTCGCTTTA+TGG | 0.078528 | 5.3:+7339479 | MS.gene21480:CDS |
GCTGATGCTGTCATGCTTTC+AGG | 0.174287 | 5.3:+7342865 | MS.gene21480:CDS |
ACTGGTTGGAGGAGGTTATT+TGG | 0.214557 | 5.3:-7339328 | None:intergenic |
TCCCCTTCTTTGAGTAAAAT+TGG | 0.214804 | 5.3:-7339863 | None:intergenic |
CTGGTTGGAGGAGGTTATTT+GGG | 0.225464 | 5.3:-7339327 | None:intergenic |
TAGAGTGGTTTATGAGTTAA+AGG | 0.244503 | 5.3:+7340505 | MS.gene21480:CDS |
ATATTTGTTGCCACAATAAC+TGG | 0.253207 | 5.3:-7342766 | None:intergenic |
TTATGGAAGCTCAAATGATT+TGG | 0.306013 | 5.3:-7343547 | None:intergenic |
CATCAGATTACCTGCAATAA+AGG | 0.308265 | 5.3:-7341800 | None:intergenic |
CCCATCTGAAGCTGAAAGTA+TGG | 0.322009 | 5.3:-7340735 | None:intergenic |
TTTGAAAATTGCATGTATAT+AGG | 0.322417 | 5.3:-7344165 | None:intergenic |
CTAGCTCACGTGACATGATT+TGG | 0.326959 | 5.3:+7339573 | MS.gene21480:CDS |
AGACATAATTGTTGCATGTA+AGG | 0.339282 | 5.3:-7343748 | None:intergenic |
GAAAGTATGGAATGAAGATT+TGG | 0.359728 | 5.3:-7340722 | None:intergenic |
ATTATTGTGTTCACCAGAAC+TGG | 0.366269 | 5.3:+7343789 | MS.gene21480:CDS |
GTTCTGGTGAACACAATAAT+AGG | 0.368132 | 5.3:-7343786 | None:intergenic |
TTATGCATGCGGTGGCTCTA+AGG | 0.369389 | 5.3:+7343491 | MS.gene21480:CDS |
CTTTATGGTACGTGGCGAAC+AGG | 0.375273 | 5.3:+7339494 | MS.gene21480:CDS |
CAACAGAATTATACCAGTTA+TGG | 0.376774 | 5.3:-7340286 | None:intergenic |
GTTAAATGTCAAGTTATTGA+TGG | 0.386049 | 5.3:+7340204 | MS.gene21480:CDS |
ATTCAAGTTCGCGAGGTTCA+TGG | 0.386523 | 5.3:+7344406 | MS.gene21480:CDS |
GCAACGCTTCCTTCCATAAC+TGG | 0.387501 | 5.3:+7340273 | MS.gene21480:CDS |
ATTTGGAAGCTCGCTCAAAC+TGG | 0.405107 | 5.3:+7339590 | MS.gene21480:CDS |
AATAGCCATGGATCCAGTTC+TGG | 0.406106 | 5.3:-7343802 | None:intergenic |
TAGAATGAAATGGAAATTGT+TGG | 0.410456 | 5.3:-7339268 | None:intergenic |
GGACCTTGGAGCTGAACTTC+CGG | 0.432212 | 5.3:+7341766 | MS.gene21480:CDS |
GACTGGGAAGATATCAAATT+CGG | 0.436482 | 5.3:+7340434 | MS.gene21480:intron |
ACGAAGATCGTGTGCACGAT+TGG | 0.440932 | 5.3:+7339542 | MS.gene21480:CDS |
AAATTGTTGGGAGATGGAAT+TGG | 0.447437 | 5.3:-7339255 | None:intergenic |
TGAAGAAGTTCCTTTATTGC+AGG | 0.447794 | 5.3:+7341790 | MS.gene21480:CDS |
ATGGTTGCTCGTGGGGACCT+TGG | 0.459485 | 5.3:+7341752 | MS.gene21480:CDS |
AAAGCGGAGCACAACCAATC+TGG | 0.463651 | 5.3:+7344362 | MS.gene21480:CDS |
AGGCAAACATTGCTCCCATA+TGG | 0.466388 | 5.3:-7343728 | None:intergenic |
TTGTTGAGTAGGGCCTATAA+TGG | 0.470791 | 5.3:-7343833 | None:intergenic |
AATAAAGGAACTTCTTCAAC+CGG | 0.474687 | 5.3:-7341785 | None:intergenic |
AGAATGAAATGGAAATTGTT+GGG | 0.475446 | 5.3:-7339267 | None:intergenic |
AACCTTGGTGTCAAGCATGA+TGG | 0.477591 | 5.3:-7339720 | None:intergenic |
TTTAGGAGGAATGATGTCTC+TGG | 0.478177 | 5.3:+7340155 | MS.gene21480:intron |
AAATCATTTGAGCTTCCATA+AGG | 0.479866 | 5.3:+7343549 | MS.gene21480:CDS |
GTTAATAATACTTACGAGAG+TGG | 0.482443 | 5.3:-7339354 | None:intergenic |
ATGGCGGAGAATTGAAATCT+AGG | 0.484689 | 5.3:+7340223 | MS.gene21480:CDS |
GAAAGCAAATATTGTTGAGT+AGG | 0.489292 | 5.3:-7343844 | None:intergenic |
TCCATACTTTCAGCTTCAGA+TGG | 0.490595 | 5.3:+7340734 | MS.gene21480:CDS |
AGGAAGGATTAAGCAGAGGT+TGG | 0.491594 | 5.3:+7344122 | MS.gene21480:CDS |
TACTTACGAGAGTGGGAGAC+TGG | 0.497804 | 5.3:-7339346 | None:intergenic |
AGGCGTCATTTGAATGTTCG+TGG | 0.498628 | 5.3:+7340243 | MS.gene21480:CDS |
ATGGATTCCGCACGCCAGAT+TGG | 0.500210 | 5.3:-7344376 | None:intergenic |
TTGTAGGCAATGGTTGCTCG+TGG | 0.504158 | 5.3:+7341743 | MS.gene21480:intron |
TATGGAATGAAGATTTGGTA+TGG | 0.504548 | 5.3:-7340717 | None:intergenic |
TCTTTGAGTAAAATTGGTTG+TGG | 0.506244 | 5.3:-7339857 | None:intergenic |
GGAAGGATTAAGCAGAGGTT+GGG | 0.506385 | 5.3:+7344123 | MS.gene21480:CDS |
TTATGCTTAGTAGAATGAAA+TGG | 0.506549 | 5.3:-7339278 | None:intergenic |
TGTAGGCAATGGTTGCTCGT+GGG | 0.507482 | 5.3:+7341744 | MS.gene21480:intron |
CTTCTTATGCTGCAGAGTAA+AGG | 0.507893 | 5.3:+7344304 | MS.gene21480:intron |
TTGTTGGGAGATGGAATTGG+AGG | 0.511001 | 5.3:-7339252 | None:intergenic |
CCATACTTTCAGCTTCAGAT+GGG | 0.512422 | 5.3:+7340735 | MS.gene21480:CDS |
ATAACTTTAACAGATTTCAA+TGG | 0.520035 | 5.3:-7343472 | None:intergenic |
AAATGGAAATTGTTGGGAGA+TGG | 0.523424 | 5.3:-7339261 | None:intergenic |
GACTTCCGCCCTAGTTGGTG+TGG | 0.524986 | 5.3:-7342812 | None:intergenic |
AGAATCACTTCTTAAAACAC+TGG | 0.527093 | 5.3:-7343521 | None:intergenic |
TACGAGAGTGGGAGACTGGT+TGG | 0.531081 | 5.3:-7339342 | None:intergenic |
TTTGTCAATGATGTCGAGGT+TGG | 0.531439 | 5.3:+7339953 | MS.gene21480:CDS |
GTAGGCAATGGTTGCTCGTG+GGG | 0.538287 | 5.3:+7341745 | MS.gene21480:intron |
GGAGACGTTCTTCTCGTCGA+TGG | 0.538636 | 5.3:+7339974 | MS.gene21480:CDS |
TTTATGGTACGTGGCGAACA+GGG | 0.539109 | 5.3:+7339495 | MS.gene21480:CDS |
AAAGCAAATATTGTTGAGTA+GGG | 0.543382 | 5.3:-7343843 | None:intergenic |
GGTACGTGGCGAACAGGGGA+AGG | 0.543690 | 5.3:+7339500 | MS.gene21480:CDS |
TTAATAATACTTACGAGAGT+GGG | 0.544034 | 5.3:-7339353 | None:intergenic |
TAGAGCTCTCAAACTACTGT+TGG | 0.548085 | 5.3:+7344209 | MS.gene21480:CDS |
AGATTTGAAGAGAGAAGACG+TGG | 0.548216 | 5.3:-7339204 | None:intergenic |
TTATTCATCCCACACCAACT+AGG | 0.548728 | 5.3:+7342803 | MS.gene21480:CDS |
CTTCTTCGCTTTATGGTACG+TGG | 0.549723 | 5.3:+7339486 | MS.gene21480:CDS |
TATTCATCCCACACCAACTA+GGG | 0.551145 | 5.3:+7342804 | MS.gene21480:CDS |
TCTGAGACTTCCGCCCTAGT+TGG | 0.552113 | 5.3:-7342817 | None:intergenic |
AATGCAAAAGCCAGTTATTG+TGG | 0.555416 | 5.3:+7342756 | MS.gene21480:CDS |
ACATCCCCACTTCTAACTTC+AGG | 0.560293 | 5.3:-7339833 | None:intergenic |
AATCATGTCACGTGAGCTAG+TGG | 0.560480 | 5.3:-7339570 | None:intergenic |
GCGAACTTGAATGTGGTGAA+TGG | 0.564425 | 5.3:-7344395 | None:intergenic |
AGTGGGAGACTGGTTGGAGG+AGG | 0.565230 | 5.3:-7339336 | None:intergenic |
CGCTCAAACTGGAATGAATG+TGG | 0.566062 | 5.3:+7339601 | MS.gene21480:CDS |
ATTTGTCAAGGATGCTAGAG+TGG | 0.569048 | 5.3:+7340490 | MS.gene21480:CDS |
TTCCATCATGCTTGACACCA+AGG | 0.575678 | 5.3:+7339718 | MS.gene21480:CDS |
TAAGTCAAAGACAAAAGACT+TGG | 0.575703 | 5.3:+7340182 | MS.gene21480:CDS |
ATGGCTCAAAAGAATAGCCA+TGG | 0.577093 | 5.3:-7343814 | None:intergenic |
TGGTTGGAGGAGGTTATTTG+GGG | 0.581391 | 5.3:-7339326 | None:intergenic |
CTATGCTGTATCATTTGTCA+AGG | 0.582412 | 5.3:+7340478 | MS.gene21480:CDS |
GAGAGTGGGAGACTGGTTGG+AGG | 0.588953 | 5.3:-7339339 | None:intergenic |
CAACCGGAAGTTCAGCTCCA+AGG | 0.592964 | 5.3:-7341769 | None:intergenic |
CAGGGTCCTGAAGTTAGAAG+TGG | 0.601265 | 5.3:+7339827 | MS.gene21480:intron |
GTTCACCAGAACTGGATCCA+TGG | 0.601626 | 5.3:+7343797 | MS.gene21480:CDS |
CTCGTTTGAATATGTCACAT+GGG | 0.602332 | 5.3:+7339624 | MS.gene21480:CDS |
AGGGTCCTGAAGTTAGAAGT+GGG | 0.603493 | 5.3:+7339828 | MS.gene21480:intron |
ATTCTACTAAGCATAAGCGT+AGG | 0.604114 | 5.3:+7339285 | MS.gene21480:CDS |
CTTTCAGGAGAAACCGCACA+TGG | 0.609257 | 5.3:+7342880 | MS.gene21480:CDS |
ATGTCACGTGAGCTAGTGGA+TGG | 0.616833 | 5.3:-7339566 | None:intergenic |
AGAATTATACCAGTTATGGA+AGG | 0.618973 | 5.3:-7340282 | None:intergenic |
ACAGAGGAAGGATTAAGCAG+AGG | 0.619421 | 5.3:+7344118 | MS.gene21480:intron |
GCAAACACACTTTCCATGTG+CGG | 0.620007 | 5.3:-7342893 | None:intergenic |
TAGTTTGAGAGCTCTAGCAA+AGG | 0.632195 | 5.3:-7344202 | None:intergenic |
AAATGTCAAGTTATTGATGG+CGG | 0.632838 | 5.3:+7340207 | MS.gene21480:CDS |
ACTTCCGCCCTAGTTGGTGT+GGG | 0.639256 | 5.3:-7342811 | None:intergenic |
CATACTTTCAGCTTCAGATG+GGG | 0.642578 | 5.3:+7340736 | MS.gene21480:CDS |
AGTAAAGGTCATTTAGACGA+GGG | 0.650023 | 5.3:+7344319 | MS.gene21480:CDS |
TTATGGTACGTGGCGAACAG+GGG | 0.652515 | 5.3:+7339496 | MS.gene21480:CDS |
TCACCACATTCAAGTTCGCG+AGG | 0.654208 | 5.3:+7344399 | MS.gene21480:CDS |
TGTTAAAGTTATGCATGCGG+TGG | 0.657671 | 5.3:+7343483 | MS.gene21480:CDS |
TATGTTACTCTTGTTCAAAG+CGG | 0.659469 | 5.3:+7344346 | MS.gene21480:CDS |
AGCACAACCAATCTGGCGTG+CGG | 0.662564 | 5.3:+7344369 | MS.gene21480:CDS |
GATTTGAAGAGAGAAGACGT+GGG | 0.664172 | 5.3:-7339203 | None:intergenic |
GTAAAGGTCATTTAGACGAG+GGG | 0.667617 | 5.3:+7344320 | MS.gene21480:CDS |
GCTCGTTTGAATATGTCACA+TGG | 0.667972 | 5.3:+7339623 | MS.gene21480:CDS |
GAGTAAAGGTCATTTAGACG+AGG | 0.670895 | 5.3:+7344318 | MS.gene21480:intron |
TCATCCCACACCAACTAGGG+CGG | 0.676041 | 5.3:+7342807 | MS.gene21480:CDS |
GGGTCCTGAAGTTAGAAGTG+GGG | 0.678048 | 5.3:+7339829 | MS.gene21480:intron |
ATTGCAATTGCAGTAAGACA+AGG | 0.681715 | 5.3:+7342841 | MS.gene21480:CDS |
TCGTTTGAATATGTCACATG+GGG | 0.683251 | 5.3:+7339625 | MS.gene21480:CDS |
GAACCTCGCGAACTTGAATG+TGG | 0.702421 | 5.3:-7344402 | None:intergenic |
ATCTGTTAAAGTTATGCATG+CGG | 0.709524 | 5.3:+7343480 | MS.gene21480:CDS |
GGTTGGAGGAGGTTATTTGG+GGG | 0.775151 | 5.3:-7339325 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATTTCTATAGTAAAATATAT+AGG | + | chr5.3:7342083-7342102 | MS.gene21480:intron | 10.0% |
!!! | TGTAAGAAATTTATTTTAAA+AGG | + | chr5.3:7343429-7343448 | MS.gene21480:intron | 10.0% |
!! | AAATATAAGGATAAATAGAA+TGG | + | chr5.3:7343102-7343121 | MS.gene21480:intron | 15.0% |
!! | AATGTAAACACAAATTAATT+AGG | - | chr5.3:7343698-7343717 | None:intergenic | 15.0% |
!! | CACAAATAAATATAATACTT+TGG | - | chr5.3:7341689-7341708 | None:intergenic | 15.0% |
!! | GATTATTATAAACACAAAAT+TGG | - | chr5.3:7340050-7340069 | None:intergenic | 15.0% |
!! | TTAAAAAAAGATGACAAATT+AGG | - | chr5.3:7343350-7343369 | None:intergenic | 15.0% |
!! | TTGAACTGATAAAATAAAAA+AGG | - | chr5.3:7342939-7342958 | None:intergenic | 15.0% |
!!! | ACATTTCAAGTTAAAAATAT+CGG | + | chr5.3:7340869-7340888 | MS.gene21480:intron | 15.0% |
!!! | ATGTTTGATAATCATTATTT+TGG | + | chr5.3:7341899-7341918 | MS.gene21480:intron | 15.0% |
!!! | ATTTACTTTTTAAAATGTCT+AGG | - | chr5.3:7343193-7343212 | None:intergenic | 15.0% |
!!! | ATTTGAATCTTTTGTTTTAT+AGG | - | chr5.3:7342418-7342437 | None:intergenic | 15.0% |
!!! | TCAATTTTACTATTAAAAGA+GGG | + | chr5.3:7339891-7339910 | MS.gene21480:CDS | 15.0% |
!!! | TTCAATTTTACTATTAAAAG+AGG | + | chr5.3:7339890-7339909 | MS.gene21480:CDS | 15.0% |
!! | AATACATAATTTGAACAATG+AGG | - | chr5.3:7340768-7340787 | None:intergenic | 20.0% |
!! | ACAGACTATTTATATAAATG+AGG | + | chr5.3:7342118-7342137 | MS.gene21480:intron | 20.0% |
!! | ACCATAAAAAATGTTTATGA+AGG | + | chr5.3:7342463-7342482 | MS.gene21480:intron | 20.0% |
!! | ATAAAATAAAAAAGGAACCA+TGG | - | chr5.3:7342931-7342950 | None:intergenic | 20.0% |
!! | CAGACTATTTATATAAATGA+GGG | + | chr5.3:7342119-7342138 | MS.gene21480:intron | 20.0% |
!! | GATATTATCAATCAAATCTA+CGG | - | chr5.3:7343669-7343688 | None:intergenic | 20.0% |
!! | GATCATATTATATTATCTTG+AGG | + | chr5.3:7344040-7344059 | MS.gene21480:intron | 20.0% |
!! | TACAATTAGATGATTACTAA+TGG | - | chr5.3:7341662-7341681 | None:intergenic | 20.0% |
!! | TATTATAAACACAAAATTGG+AGG | - | chr5.3:7340047-7340066 | None:intergenic | 20.0% |
!! | TCGCAAAATTATTAAAAGAA+CGG | - | chr5.3:7342613-7342632 | None:intergenic | 20.0% |
!! | TTATATTATCTTGAGGTAAT+AGG | + | chr5.3:7344047-7344066 | MS.gene21480:intron | 20.0% |
!! | TTTGAAAATTGCATGTATAT+AGG | - | chr5.3:7344168-7344187 | None:intergenic | 20.0% |
!!! | AAAATCAATAGTTTTCTGAT+GGG | - | chr5.3:7339660-7339679 | None:intergenic | 20.0% |
!!! | ACACAAATTAATTAGGTTTT+AGG | - | chr5.3:7343691-7343710 | None:intergenic | 20.0% |
!!! | ATATCTTTTCACTGATATTT+AGG | + | chr5.3:7342647-7342666 | MS.gene21480:intron | 20.0% |
!!! | CAAAAACATAATTACTTTTG+AGG | - | chr5.3:7340535-7340554 | None:intergenic | 20.0% |
!!! | CAATTTTACTATTAAAAGAG+GGG | + | chr5.3:7339892-7339911 | MS.gene21480:CDS | 20.0% |
!!! | TAATTTTATATCTTTTCCGT+AGG | + | chr5.3:7340647-7340666 | MS.gene21480:intron | 20.0% |
!!! | TCCTTCATAAACATTTTTTA+TGG | - | chr5.3:7342467-7342486 | None:intergenic | 20.0% |
! | AAAGCAAATATTGTTGAGTA+GGG | - | chr5.3:7343846-7343865 | None:intergenic | 25.0% |
! | AAATATATAGGAGTAGATGA+CGG | + | chr5.3:7342095-7342114 | MS.gene21480:intron | 25.0% |
! | AAGAAGAATAGTTGTTAATC+CGG | - | chr5.3:7339805-7339824 | None:intergenic | 25.0% |
! | AAGGGAAACAAACAAATATA+AGG | + | chr5.3:7343089-7343108 | MS.gene21480:intron | 25.0% |
! | AAGTGACTAAAAATTTGAGA+CGG | + | chr5.3:7342184-7342203 | MS.gene21480:intron | 25.0% |
! | AGAATGAAATGGAAATTGTT+GGG | - | chr5.3:7339270-7339289 | None:intergenic | 25.0% |
! | AGAGAATATCCATCAAAAAA+AGG | - | chr5.3:7344267-7344286 | None:intergenic | 25.0% |
! | ATGTTTATGAAGGAATTCAT+TGG | + | chr5.3:7342473-7342492 | MS.gene21480:intron | 25.0% |
! | ATTCCTCCTAAAATAACAAT+GGG | - | chr5.3:7340147-7340166 | None:intergenic | 25.0% |
! | GTGAAATAAGAAGTTATAGA+TGG | - | chr5.3:7344094-7344113 | None:intergenic | 25.0% |
! | GTTAAATGTCAAGTTATTGA+TGG | + | chr5.3:7340204-7340223 | MS.gene21480:CDS | 25.0% |
! | TAGAATGAAATGGAAATTGT+TGG | - | chr5.3:7339271-7339290 | None:intergenic | 25.0% |
! | TATGTGTGTTTCTCTAATAT+TGG | + | chr5.3:7342439-7342458 | MS.gene21480:intron | 25.0% |
! | TGATATAAAATATCCTCCAA+GGG | + | chr5.3:7343071-7343090 | MS.gene21480:intron | 25.0% |
! | TGCAATGAATAATTTAACCT+TGG | - | chr5.3:7339738-7339757 | None:intergenic | 25.0% |
! | TGTGTTTATCTTCACATAAA+AGG | + | chr5.3:7340412-7340431 | MS.gene21480:intron | 25.0% |
! | TTAATAATACTTACGAGAGT+GGG | - | chr5.3:7339356-7339375 | None:intergenic | 25.0% |
! | TTATATTTGTTTGTTTCCCT+TGG | - | chr5.3:7343090-7343109 | None:intergenic | 25.0% |
! | TTATGCTTAGTAGAATGAAA+TGG | - | chr5.3:7339281-7339300 | None:intergenic | 25.0% |
! | TTCTATTTGTGTGTTATACA+AGG | - | chr5.3:7340898-7340917 | None:intergenic | 25.0% |
!! | AACCAATTTTACTCAAAGAA+GGG | + | chr5.3:7339861-7339880 | MS.gene21480:CDS | 25.0% |
!! | AATTGTGTACATCAATTTTC+CGG | + | chr5.3:7342267-7342286 | MS.gene21480:intron | 25.0% |
!! | CAAAATCAATAGTTTTCTGA+TGG | - | chr5.3:7339661-7339680 | None:intergenic | 25.0% |
!! | TTCTTATTTCACTATTACAG+AGG | + | chr5.3:7344102-7344121 | MS.gene21480:intron | 25.0% |
!!! | AATCCCGTTTTTAATAAAAC+AGG | + | chr5.3:7342708-7342727 | MS.gene21480:intron | 25.0% |
!!! | TATTTTGGCACATTTGATTA+GGG | + | chr5.3:7341914-7341933 | MS.gene21480:intron | 25.0% |
!!! | TCCTCCTGTTTTATTAAAAA+CGG | - | chr5.3:7342715-7342734 | None:intergenic | 25.0% |
!!! | TTAACTCATTATTTCTGAGT+CGG | + | chr5.3:7339372-7339391 | MS.gene21480:intron | 25.0% |
!!! | TTATTTTGGCACATTTGATT+AGG | + | chr5.3:7341913-7341932 | MS.gene21480:intron | 25.0% |
AAACCACACTTATAATGAGA+TGG | - | chr5.3:7342022-7342041 | None:intergenic | 30.0% | |
AAATCATTTGAGCTTCCATA+AGG | + | chr5.3:7343549-7343568 | MS.gene21480:CDS | 30.0% | |
AAATGTCAAGTTATTGATGG+CGG | + | chr5.3:7340207-7340226 | MS.gene21480:CDS | 30.0% | |
AAATGTTAAATCAGCCATAG+CGG | - | chr5.3:7341560-7341579 | None:intergenic | 30.0% | |
AACTACATATGTATGTCACA+AGG | - | chr5.3:7343597-7343616 | None:intergenic | 30.0% | |
AACTTCAACTAAGCAAAGTT+TGG | + | chr5.3:7343125-7343144 | MS.gene21480:intron | 30.0% | |
AATAAAGGAACTTCTTCAAC+CGG | - | chr5.3:7341788-7341807 | None:intergenic | 30.0% | |
ACTTCAACTAAGCAAAGTTT+GGG | + | chr5.3:7343126-7343145 | MS.gene21480:intron | 30.0% | |
AGAATCACTTCTTAAAACAC+TGG | - | chr5.3:7343524-7343543 | None:intergenic | 30.0% | |
AGAATTATACCAGTTATGGA+AGG | - | chr5.3:7340285-7340304 | None:intergenic | 30.0% | |
AGACATAATTGTTGCATGTA+AGG | - | chr5.3:7343751-7343770 | None:intergenic | 30.0% | |
AGTAGCATAAAATTGTCAAC+TGG | - | chr5.3:7340386-7340405 | None:intergenic | 30.0% | |
AGTTCGTGTAAAACTTTACA+TGG | - | chr5.3:7342540-7342559 | None:intergenic | 30.0% | |
ATCTGTTAAAGTTATGCATG+CGG | + | chr5.3:7343480-7343499 | MS.gene21480:CDS | 30.0% | |
ATTATCAATCAAATCTACGG+TGG | - | chr5.3:7343666-7343685 | None:intergenic | 30.0% | |
CAACAGAATTATACCAGTTA+TGG | - | chr5.3:7340289-7340308 | None:intergenic | 30.0% | |
CATTCCTCCTAAAATAACAA+TGG | - | chr5.3:7340148-7340167 | None:intergenic | 30.0% | |
CTATATACATGTCACCAAAA+TGG | - | chr5.3:7341852-7341871 | None:intergenic | 30.0% | |
CTCATTATAAGTGTGGTTTA+AGG | + | chr5.3:7342023-7342042 | MS.gene21480:intron | 30.0% | |
CTCGATAAAGAAACTAAAAG+TGG | + | chr5.3:7340845-7340864 | MS.gene21480:intron | 30.0% | |
GAAAGCAAATATTGTTGAGT+AGG | - | chr5.3:7343847-7343866 | None:intergenic | 30.0% | |
GGATTAACAACTATTCTTCT+TGG | + | chr5.3:7339804-7339823 | MS.gene21480:intron | 30.0% | |
GTGATATAAAATATCCTCCA+AGG | + | chr5.3:7343070-7343089 | MS.gene21480:intron | 30.0% | |
GTTAATAATACTTACGAGAG+TGG | - | chr5.3:7339357-7339376 | None:intergenic | 30.0% | |
TAAGTCAAAGACAAAAGACT+TGG | + | chr5.3:7340182-7340201 | MS.gene21480:CDS | 30.0% | |
TAGAACTCAAAAGATGAAAC+TGG | - | chr5.3:7341720-7341739 | None:intergenic | 30.0% | |
TAGAGTGGTTTATGAGTTAA+AGG | + | chr5.3:7340505-7340524 | MS.gene21480:CDS | 30.0% | |
TAGAGTTTCAATGTGATATG+TGG | + | chr5.3:7342511-7342530 | MS.gene21480:intron | 30.0% | |
TATCAAAATGCCAGATTACT+AGG | + | chr5.3:7341306-7341325 | MS.gene21480:intron | 30.0% | |
TATCTTCACATAAAAGGACT+GGG | + | chr5.3:7340418-7340437 | MS.gene21480:intron | 30.0% | |
TATGTTACTCTTGTTCAAAG+CGG | + | chr5.3:7344346-7344365 | MS.gene21480:CDS | 30.0% | |
TATTTCACTATTACAGAGGA+AGG | + | chr5.3:7344106-7344125 | MS.gene21480:intron | 30.0% | |
TCTCCTCTACTATTTGTTTA+GGG | + | chr5.3:7339443-7339462 | MS.gene21480:intron | 30.0% | |
TCTTCCATTATTCAACTTGA+TGG | - | chr5.3:7341219-7341238 | None:intergenic | 30.0% | |
TCTTTGAGTAAAATTGGTTG+TGG | - | chr5.3:7339860-7339879 | None:intergenic | 30.0% | |
TTATCTTCACATAAAAGGAC+TGG | + | chr5.3:7340417-7340436 | MS.gene21480:intron | 30.0% | |
TTATGGAAGCTCAAATGATT+TGG | - | chr5.3:7343550-7343569 | None:intergenic | 30.0% | |
TTCCTCCTAAAATAACAATG+GGG | - | chr5.3:7340146-7340165 | None:intergenic | 30.0% | |
TTCTCCTCTACTATTTGTTT+AGG | + | chr5.3:7339442-7339461 | MS.gene21480:intron | 30.0% | |
TTTCCCTAAACAAATAGTAG+AGG | - | chr5.3:7339449-7339468 | None:intergenic | 30.0% | |
TTTCTGAACTAAGTACCTTA+TGG | - | chr5.3:7343567-7343586 | None:intergenic | 30.0% | |
! | AAAGTTTTACACGAACTAGA+TGG | + | chr5.3:7342543-7342562 | MS.gene21480:intron | 30.0% |
! | ACCAATTTTACTCAAAGAAG+GGG | + | chr5.3:7339862-7339881 | MS.gene21480:CDS | 30.0% |
! | ATATTTGTTGCCACAATAAC+TGG | - | chr5.3:7342769-7342788 | None:intergenic | 30.0% |
! | ATGCGTGTTTCTTATTTCTT+GGG | + | chr5.3:7340604-7340623 | MS.gene21480:intron | 30.0% |
! | CAACCAATTTTACTCAAAGA+AGG | + | chr5.3:7339860-7339879 | MS.gene21480:CDS | 30.0% |
! | CTATTCTTTTGAGCCATTAT+AGG | + | chr5.3:7343820-7343839 | MS.gene21480:CDS | 30.0% |
! | GAAACAAACAGTACTTGTTA+TGG | + | chr5.3:7344014-7344033 | MS.gene21480:intron | 30.0% |
! | GAAAGTATGGAATGAAGATT+TGG | - | chr5.3:7340725-7340744 | None:intergenic | 30.0% |
! | TATGCGTGTTTCTTATTTCT+TGG | + | chr5.3:7340603-7340622 | MS.gene21480:intron | 30.0% |
! | TATGGAATGAAGATTTGGTA+TGG | - | chr5.3:7340720-7340739 | None:intergenic | 30.0% |
! | TGTTTGTTTCTCCTAAACAA+TGG | - | chr5.3:7344004-7344023 | None:intergenic | 30.0% |
!! | ACATGATATGTATGCCATTT+TGG | + | chr5.3:7341835-7341854 | MS.gene21480:intron | 30.0% |
!! | CATTTTGGTGACATGTATAT+AGG | + | chr5.3:7341850-7341869 | MS.gene21480:intron | 30.0% |
!! | CCTCCTGTTTTATTAAAAAC+GGG | - | chr5.3:7342714-7342733 | None:intergenic | 30.0% |
!! | GGCATTTTGATATTGTAAGA+AGG | - | chr5.3:7341298-7341317 | None:intergenic | 30.0% |
!! | TCAAGTTGAATAATGGAAGA+TGG | + | chr5.3:7341219-7341238 | MS.gene21480:intron | 30.0% |
!! | TCATCCATCAAGTTGAATAA+TGG | + | chr5.3:7341212-7341231 | MS.gene21480:intron | 30.0% |
!!! | ATGCATCTTCCTTTTTTTGA+TGG | + | chr5.3:7344255-7344274 | MS.gene21480:intron | 30.0% |
!!! | CACTTTTAGTTTCTTTATCG+AGG | - | chr5.3:7340847-7340866 | None:intergenic | 30.0% |
!!! | CTTTTGAGTTCTACTTTTGT+AGG | + | chr5.3:7341727-7341746 | MS.gene21480:intron | 30.0% |
AAAAGGAAGATGCATGCAAT+TGG | - | chr5.3:7344250-7344269 | None:intergenic | 35.0% | |
AAATGGAAATTGTTGGGAGA+TGG | - | chr5.3:7339264-7339283 | None:intergenic | 35.0% | |
AAATTGTTGGGAGATGGAAT+TGG | - | chr5.3:7339258-7339277 | None:intergenic | 35.0% | |
AACAACTATTCTTCTTGGCA+GGG | + | chr5.3:7339809-7339828 | MS.gene21480:intron | 35.0% | |
AATGCAAAAGCCAGTTATTG+TGG | + | chr5.3:7342756-7342775 | MS.gene21480:CDS | 35.0% | |
AATGCACAACACTAAGACAA+GGG | - | chr5.3:7341056-7341075 | None:intergenic | 35.0% | |
AATGTTAAATCAGCCATAGC+GGG | - | chr5.3:7341559-7341578 | None:intergenic | 35.0% | |
ACAAACTCTTCTTCGCTTTA+TGG | + | chr5.3:7339479-7339498 | MS.gene21480:CDS | 35.0% | |
ACAGAGAATGTGGTTATCTT+TGG | - | chr5.3:7341419-7341438 | None:intergenic | 35.0% | |
AGTAAAGGTCATTTAGACGA+GGG | + | chr5.3:7344319-7344338 | MS.gene21480:CDS | 35.0% | |
ATTATTGTGTTCACCAGAAC+TGG | + | chr5.3:7343789-7343808 | MS.gene21480:CDS | 35.0% | |
ATTCAGACAAATTCCCGTTT+CGG | - | chr5.3:7343167-7343186 | None:intergenic | 35.0% | |
ATTCTACTAAGCATAAGCGT+AGG | + | chr5.3:7339285-7339304 | MS.gene21480:CDS | 35.0% | |
ATTGCAATTGCAGTAAGACA+AGG | + | chr5.3:7342841-7342860 | MS.gene21480:CDS | 35.0% | |
CAGAGAATGTGGTTATCTTT+GGG | - | chr5.3:7341418-7341437 | None:intergenic | 35.0% | |
CATAACTCGATTGCATGAAA+TGG | - | chr5.3:7341150-7341169 | None:intergenic | 35.0% | |
CATCAGATTACCTGCAATAA+AGG | - | chr5.3:7341803-7341822 | None:intergenic | 35.0% | |
CATTTCATGCAATCGAGTTA+TGG | + | chr5.3:7341148-7341167 | MS.gene21480:intron | 35.0% | |
CGAGTTATGGTGAAAATTGT+CGG | + | chr5.3:7341161-7341180 | MS.gene21480:intron | 35.0% | |
CGGGATAAACAAGCATAAAA+AGG | - | chr5.3:7340569-7340588 | None:intergenic | 35.0% | |
CTATGCTGTATCATTTGTCA+AGG | + | chr5.3:7340478-7340497 | MS.gene21480:CDS | 35.0% | |
CTCGTTTGAATATGTCACAT+GGG | + | chr5.3:7339624-7339643 | MS.gene21480:CDS | 35.0% | |
GACTGGGAAGATATCAAATT+CGG | + | chr5.3:7340434-7340453 | MS.gene21480:intron | 35.0% | |
GTATACTGCAGACGTTATTA+AGG | + | chr5.3:7341328-7341347 | MS.gene21480:intron | 35.0% | |
GTTCTGGTGAACACAATAAT+AGG | - | chr5.3:7343789-7343808 | None:intergenic | 35.0% | |
TAAACAATGGTGAGGACAAA+AGG | - | chr5.3:7343991-7344010 | None:intergenic | 35.0% | |
TAACAACTATTCTTCTTGGC+AGG | + | chr5.3:7339808-7339827 | MS.gene21480:intron | 35.0% | |
TACATATGTATGTCACAAGG+AGG | - | chr5.3:7343594-7343613 | None:intergenic | 35.0% | |
TATATCAGCATTGTGTCCTA+CGG | - | chr5.3:7340666-7340685 | None:intergenic | 35.0% | |
TATCATACACACTACTTGCA+TGG | + | chr5.3:7341188-7341207 | MS.gene21480:intron | 35.0% | |
TATTTGTTTGTTTCCCTTGG+AGG | - | chr5.3:7343087-7343106 | None:intergenic | 35.0% | |
TCCCCTTCTTTGAGTAAAAT+TGG | - | chr5.3:7339866-7339885 | None:intergenic | 35.0% | |
TCGTTTGAATATGTCACATG+GGG | + | chr5.3:7339625-7339644 | MS.gene21480:CDS | 35.0% | |
TCTCCAAAATATAGACTCTG+AGG | - | chr5.3:7341636-7341655 | None:intergenic | 35.0% | |
TGAAGAAGTTCCTTTATTGC+AGG | + | chr5.3:7341790-7341809 | MS.gene21480:CDS | 35.0% | |
TTATCGAGGACTATGTTCAT+AGG | - | chr5.3:7340833-7340852 | None:intergenic | 35.0% | |
TTTGGGTATCTGTATGAGTA+AGG | - | chr5.3:7341401-7341420 | None:intergenic | 35.0% | |
! | AAGCATTGTTCTCCAAAACA+AGG | - | chr5.3:7343264-7343283 | None:intergenic | 35.0% |
! | ACATTTTTGACAGAGCCATA+TGG | + | chr5.3:7343713-7343732 | MS.gene21480:intron | 35.0% |
! | AGTTGAATAATGGAAGATGG+TGG | + | chr5.3:7341222-7341241 | MS.gene21480:intron | 35.0% |
! | ATGGTGGAACTCTTACATAT+AGG | + | chr5.3:7342562-7342581 | MS.gene21480:intron | 35.0% |
! | CATTTTTGACAGAGCCATAT+GGG | + | chr5.3:7343714-7343733 | MS.gene21480:intron | 35.0% |
! | GCAATTTTCAAATGATGCTG+AGG | + | chr5.3:7344176-7344195 | MS.gene21480:CDS | 35.0% |
! | GCTATGGCTGATTTAACATT+TGG | + | chr5.3:7341559-7341578 | MS.gene21480:intron | 35.0% |
! | GTTGAATAATGGAAGATGGT+GGG | + | chr5.3:7341223-7341242 | MS.gene21480:intron | 35.0% |
! | TATTAGATTTTCCCAGTGAC+TGG | - | chr5.3:7341951-7341970 | None:intergenic | 35.0% |
! | TCAGCTGACGTATATTTTTC+TGG | - | chr5.3:7343949-7343968 | None:intergenic | 35.0% |
! | TGATTTTGTCAATGATGTCG+AGG | + | chr5.3:7339949-7339968 | MS.gene21480:CDS | 35.0% |
! | TGCGTGTTTCTTATTTCTTG+GGG | + | chr5.3:7340605-7340624 | MS.gene21480:intron | 35.0% |
! | TTCACTGATATTTAGGACGT+AGG | + | chr5.3:7342654-7342673 | MS.gene21480:intron | 35.0% |
! | TTTTGTCCTCACCATTGTTT+AGG | + | chr5.3:7343990-7344009 | MS.gene21480:intron | 35.0% |
!! | AGTTCTACTTTTGTAGGCAA+TGG | + | chr5.3:7341733-7341752 | MS.gene21480:intron | 35.0% |
!! | CCCGTTTTTAATAAAACAGG+AGG | + | chr5.3:7342711-7342730 | MS.gene21480:intron | 35.0% |
!! | GAGTTTGATGTAAGTTGATC+TGG | + | chr5.3:7340925-7340944 | MS.gene21480:intron | 35.0% |
!! | TTTTGGAGAACAATGCTTTC+AGG | + | chr5.3:7343266-7343285 | MS.gene21480:intron | 35.0% |
!!! | AGTTATTTTTCGTCCTGCTA+TGG | + | chr5.3:7343316-7343335 | MS.gene21480:intron | 35.0% |
!!! | TCTCTCCCCATTGTTATTTT+AGG | + | chr5.3:7340138-7340157 | MS.gene21480:intron | 35.0% |
AGAGGTCTTACCTTTCATAG+AGG | + | chr5.3:7342381-7342400 | MS.gene21480:intron | 40.0% | |
AGATTTGAAGAGAGAAGACG+TGG | - | chr5.3:7339207-7339226 | None:intergenic | 40.0% | |
AGCAAGTCTCAGATTCTTAC+GGG | + | chr5.3:7340974-7340993 | MS.gene21480:intron | 40.0% | |
ATATGTTCTGCTTCACAGCA+TGG | + | chr5.3:7341080-7341099 | MS.gene21480:intron | 40.0% | |
ATCGATTGCAGATAGGCAAT+AGG | + | chr5.3:7340321-7340340 | MS.gene21480:intron | 40.0% | |
ATGCACAACACTAAGACAAG+GGG | - | chr5.3:7341055-7341074 | None:intergenic | 40.0% | |
ATGGCTCAAAAGAATAGCCA+TGG | - | chr5.3:7343817-7343836 | None:intergenic | 40.0% | |
ATTTCTCTGCATGTCCGAAA+CGG | + | chr5.3:7343150-7343169 | MS.gene21480:intron | 40.0% | |
ATTTGTCAAGGATGCTAGAG+TGG | + | chr5.3:7340490-7340509 | MS.gene21480:CDS | 40.0% | |
CATACTTTCAGCTTCAGATG+GGG | + | chr5.3:7340736-7340755 | MS.gene21480:CDS | 40.0% | |
CCACACTTATAATGAGATGG+AGG | - | chr5.3:7342019-7342038 | None:intergenic | 40.0% | |
CCATACTTTCAGCTTCAGAT+GGG | + | chr5.3:7340735-7340754 | MS.gene21480:CDS | 40.0% | |
CCTCCATCTCATTATAAGTG+TGG | + | chr5.3:7342016-7342035 | MS.gene21480:intron | 40.0% | |
CTGCAGACGTTATTAAGGTT+TGG | + | chr5.3:7341333-7341352 | MS.gene21480:intron | 40.0% | |
CTGCAGTATACCTAGTAATC+TGG | - | chr5.3:7341319-7341338 | None:intergenic | 40.0% | |
CTTCTTATGCTGCAGAGTAA+AGG | + | chr5.3:7344304-7344323 | MS.gene21480:intron | 40.0% | |
GAAAGCAGTGAACTAAACGA+CGG | + | chr5.3:7342345-7342364 | MS.gene21480:intron | 40.0% | |
GAATGCACAACACTAAGACA+AGG | - | chr5.3:7341057-7341076 | None:intergenic | 40.0% | |
GACACTCATAATGAGACTGA+TGG | + | chr5.3:7342224-7342243 | MS.gene21480:intron | 40.0% | |
GAGATTCGGATAATCGAGTT+AGG | - | chr5.3:7340113-7340132 | None:intergenic | 40.0% | |
GAGCAAGTCTCAGATTCTTA+CGG | + | chr5.3:7340973-7340992 | MS.gene21480:intron | 40.0% | |
GAGGTCTTACCTTTCATAGA+GGG | + | chr5.3:7342382-7342401 | MS.gene21480:intron | 40.0% | |
GAGTAAAGGTCATTTAGACG+AGG | + | chr5.3:7344318-7344337 | MS.gene21480:intron | 40.0% | |
GATGCACACTGATGTATAGA+AGG | - | chr5.3:7340811-7340830 | None:intergenic | 40.0% | |
GATTTGAAGAGAGAAGACGT+GGG | - | chr5.3:7339206-7339225 | None:intergenic | 40.0% | |
GCTCGTTTGAATATGTCACA+TGG | + | chr5.3:7339623-7339642 | MS.gene21480:CDS | 40.0% | |
GGATTGAGCTACATAGAACA+TGG | - | chr5.3:7342693-7342712 | None:intergenic | 40.0% | |
GGCAGGTTCAAACTAATTCA+GGG | - | chr5.3:7341589-7341608 | None:intergenic | 40.0% | |
GTAAAGGTCATTTAGACGAG+GGG | + | chr5.3:7344320-7344339 | MS.gene21480:CDS | 40.0% | |
GTTGCACTAAACGTTAACGA+TGG | + | chr5.3:7342318-7342337 | MS.gene21480:intron | 40.0% | |
GTTTCTCCTAAACAATGGTG+AGG | - | chr5.3:7343999-7344018 | None:intergenic | 40.0% | |
TAAGACCTCTCAGTTGAGAA+AGG | - | chr5.3:7342371-7342390 | None:intergenic | 40.0% | |
TAGAGCTCTCAAACTACTGT+TGG | + | chr5.3:7344209-7344228 | MS.gene21480:CDS | 40.0% | |
TATTCATCCCACACCAACTA+GGG | + | chr5.3:7342804-7342823 | MS.gene21480:CDS | 40.0% | |
TCACAGCATGGTGCATTATA+TGG | + | chr5.3:7341092-7341111 | MS.gene21480:intron | 40.0% | |
TCCATACTTTCAGCTTCAGA+TGG | + | chr5.3:7340734-7340753 | MS.gene21480:CDS | 40.0% | |
TCTATTACGCCCTCTATGAA+AGG | - | chr5.3:7342394-7342413 | None:intergenic | 40.0% | |
TGTTAAAGTTATGCATGCGG+TGG | + | chr5.3:7343483-7343502 | MS.gene21480:CDS | 40.0% | |
TTATTCATCCCACACCAACT+AGG | + | chr5.3:7342803-7342822 | MS.gene21480:CDS | 40.0% | |
TTGTTGAGTAGGGCCTATAA+TGG | - | chr5.3:7343836-7343855 | None:intergenic | 40.0% | |
TTTAGGAGGAATGATGTCTC+TGG | + | chr5.3:7340155-7340174 | MS.gene21480:intron | 40.0% | |
TTTATCCCGTTGTGTGAATC+TGG | + | chr5.3:7340580-7340599 | MS.gene21480:intron | 40.0% | |
TTTGTCAATGATGTCGAGGT+TGG | + | chr5.3:7339953-7339972 | MS.gene21480:CDS | 40.0% | |
! | AGGCCTCAGAGTCTATATTT+TGG | + | chr5.3:7341630-7341649 | MS.gene21480:intron | 40.0% |
! | ATAGGTTTTCCAATACCCTC+AGG | + | chr5.3:7341610-7341629 | MS.gene21480:intron | 40.0% |
! | ATGGCGGAGAATTGAAATCT+AGG | + | chr5.3:7340223-7340242 | MS.gene21480:CDS | 40.0% |
! | ATTAGTTTGAACCTGCCGAT+AGG | + | chr5.3:7341592-7341611 | MS.gene21480:intron | 40.0% |
! | GTTTTACACGAACTAGATGG+TGG | + | chr5.3:7342546-7342565 | MS.gene21480:intron | 40.0% |
! | TAGTTTGAGAGCTCTAGCAA+AGG | - | chr5.3:7344205-7344224 | None:intergenic | 40.0% |
! | TAGTTTTCTGATGGGAAGTG+TGG | - | chr5.3:7339652-7339671 | None:intergenic | 40.0% |
!! | CTGCAGACTTAACCTTGTTT+TGG | + | chr5.3:7343249-7343268 | MS.gene21480:intron | 40.0% |
!! | GAAAGTGTGTTTGCTATCCT+CGG | + | chr5.3:7342902-7342921 | MS.gene21480:intron | 40.0% |
!! | GAGGGTATTGGAAAACCTAT+CGG | - | chr5.3:7341610-7341629 | None:intergenic | 40.0% |
!! | GTTTGTTTCTGCACTATTGC+TGG | + | chr5.3:7341258-7341277 | MS.gene21480:intron | 40.0% |
!! | TTAGGTTTTGTAGCCATAGC+AGG | - | chr5.3:7343332-7343351 | None:intergenic | 40.0% |
!!! | AATGGAAGATGGTGGGTTTT+TGG | + | chr5.3:7341230-7341249 | MS.gene21480:intron | 40.0% |
!!! | CTCCCCATTGTTATTTTAGG+AGG | + | chr5.3:7340141-7340160 | MS.gene21480:intron | 40.0% |
!!! | TAACTGGCTTTTGCATTCTG+AGG | - | chr5.3:7342753-7342772 | None:intergenic | 40.0% |
AATAGCCATGGATCCAGTTC+TGG | - | chr5.3:7343805-7343824 | None:intergenic | 45.0% | |
AATCATGTCACGTGAGCTAG+TGG | - | chr5.3:7339573-7339592 | None:intergenic | 45.0% | |
ACAGAGGAAGGATTAAGCAG+AGG | + | chr5.3:7344118-7344137 | MS.gene21480:intron | 45.0% | |
ACATCCCCACTTCTAACTTC+AGG | - | chr5.3:7339836-7339855 | None:intergenic | 45.0% | |
ACTGGTTGGAGGAGGTTATT+TGG | - | chr5.3:7339331-7339350 | None:intergenic | 45.0% | |
AGGAAGGATTAAGCAGAGGT+TGG | + | chr5.3:7344122-7344141 | MS.gene21480:CDS | 45.0% | |
AGGCAAACATTGCTCCCATA+TGG | - | chr5.3:7343731-7343750 | None:intergenic | 45.0% | |
AGGCGTCATTTGAATGTTCG+TGG | + | chr5.3:7340243-7340262 | MS.gene21480:CDS | 45.0% | |
AGGGTCCTGAAGTTAGAAGT+GGG | + | chr5.3:7339828-7339847 | MS.gene21480:intron | 45.0% | |
ATTTGGAAGCTCGCTCAAAC+TGG | + | chr5.3:7339590-7339609 | MS.gene21480:CDS | 45.0% | |
CGCATACCAGATTCACACAA+CGG | - | chr5.3:7340589-7340608 | None:intergenic | 45.0% | |
CGCTCAAACTGGAATGAATG+TGG | + | chr5.3:7339601-7339620 | MS.gene21480:CDS | 45.0% | |
CGGCAGGTTCAAACTAATTC+AGG | - | chr5.3:7341590-7341609 | None:intergenic | 45.0% | |
CTAGCTCACGTGACATGATT+TGG | + | chr5.3:7339573-7339592 | MS.gene21480:CDS | 45.0% | |
CTGGTTGGAGGAGGTTATTT+GGG | - | chr5.3:7339330-7339349 | None:intergenic | 45.0% | |
CTTCTTCGCTTTATGGTACG+TGG | + | chr5.3:7339486-7339505 | MS.gene21480:CDS | 45.0% | |
GATAACCACATTCTCTGTGC+AGG | + | chr5.3:7341421-7341440 | MS.gene21480:intron | 45.0% | |
GCAAACACACTTTCCATGTG+CGG | - | chr5.3:7342896-7342915 | None:intergenic | 45.0% | |
GCAAGTCTCAGATTCTTACG+GGG | + | chr5.3:7340975-7340994 | MS.gene21480:intron | 45.0% | |
GCATACCAGATTCACACAAC+GGG | - | chr5.3:7340588-7340607 | None:intergenic | 45.0% | |
GCGAACTTGAATGTGGTGAA+TGG | - | chr5.3:7344398-7344417 | None:intergenic | 45.0% | |
GGAAGGATTAAGCAGAGGTT+GGG | + | chr5.3:7344123-7344142 | MS.gene21480:CDS | 45.0% | |
GGGGAGAGAATCAAGAGATT+CGG | - | chr5.3:7340127-7340146 | None:intergenic | 45.0% | |
GTATTGGAAAACCTATCGGC+AGG | - | chr5.3:7341606-7341625 | None:intergenic | 45.0% | |
GTCCTTGATCGATTGCAGAT+AGG | + | chr5.3:7340314-7340333 | MS.gene21480:intron | 45.0% | |
GTTTAGTGCAACAGCTATGC+AGG | - | chr5.3:7342310-7342329 | None:intergenic | 45.0% | |
TGCCTATCTGCAATCGATCA+AGG | - | chr5.3:7340319-7340338 | None:intergenic | 45.0% | |
TGGTTGGAGGAGGTTATTTG+GGG | - | chr5.3:7339329-7339348 | None:intergenic | 45.0% | |
TTCCATCATGCTTGACACCA+AGG | + | chr5.3:7339718-7339737 | MS.gene21480:CDS | 45.0% | |
TTGTTGGGAGATGGAATTGG+AGG | - | chr5.3:7339255-7339274 | None:intergenic | 45.0% | |
TTTATGGTACGTGGCGAACA+GGG | + | chr5.3:7339495-7339514 | MS.gene21480:CDS | 45.0% | |
TTTCTCTGCATGTCCGAAAC+GGG | + | chr5.3:7343151-7343170 | MS.gene21480:intron | 45.0% | |
! | ATTCAAGTTCGCGAGGTTCA+TGG | + | chr5.3:7344406-7344425 | MS.gene21480:CDS | 45.0% |
! | CCCATCTGAAGCTGAAAGTA+TGG | - | chr5.3:7340738-7340757 | None:intergenic | 45.0% |
!! | AACCTTGGTGTCAAGCATGA+TGG | - | chr5.3:7339723-7339742 | None:intergenic | 45.0% |
!! | AATATAGACTCTGAGGCCTG+AGG | - | chr5.3:7341629-7341648 | None:intergenic | 45.0% |
!! | ATATAGACTCTGAGGCCTGA+GGG | - | chr5.3:7341628-7341647 | None:intergenic | 45.0% |
AAAGCGGAGCACAACCAATC+TGG | + | chr5.3:7344362-7344381 | MS.gene21480:CDS | 50.0% | |
ACCAAACACGACACTGACAC+CGG | + | chr5.3:7339783-7339802 | MS.gene21480:intron | 50.0% | |
ACGAAGATCGTGTGCACGAT+TGG | + | chr5.3:7339542-7339561 | MS.gene21480:CDS | 50.0% | |
ATGCAGTAGCTCCAGTCACT+GGG | + | chr5.3:7341937-7341956 | MS.gene21480:intron | 50.0% | |
ATGTCACGTGAGCTAGTGGA+TGG | - | chr5.3:7339569-7339588 | None:intergenic | 50.0% | |
CAAAGCCTGCACAGAGAATG+TGG | - | chr5.3:7341429-7341448 | None:intergenic | 50.0% | |
CAGGGTCCTGAAGTTAGAAG+TGG | + | chr5.3:7339827-7339846 | MS.gene21480:intron | 50.0% | |
CTTTATGGTACGTGGCGAAC+AGG | + | chr5.3:7339494-7339513 | MS.gene21480:CDS | 50.0% | |
CTTTCAGGAGAAACCGCACA+TGG | + | chr5.3:7342880-7342899 | MS.gene21480:CDS | 50.0% | |
GAACCTCGCGAACTTGAATG+TGG | - | chr5.3:7344405-7344424 | None:intergenic | 50.0% | |
GCAACGCTTCCTTCCATAAC+TGG | + | chr5.3:7340273-7340292 | MS.gene21480:CDS | 50.0% | |
GCTGATGCTGTCATGCTTTC+AGG | + | chr5.3:7342865-7342884 | MS.gene21480:CDS | 50.0% | |
GGGTCCTGAAGTTAGAAGTG+GGG | + | chr5.3:7339829-7339848 | MS.gene21480:intron | 50.0% | |
GGTTGGAGGAGGTTATTTGG+GGG | - | chr5.3:7339328-7339347 | None:intergenic | 50.0% | |
GTTCACCAGAACTGGATCCA+TGG | + | chr5.3:7343797-7343816 | MS.gene21480:CDS | 50.0% | |
TACTTACGAGAGTGGGAGAC+TGG | - | chr5.3:7339349-7339368 | None:intergenic | 50.0% | |
TCGCTGAAAACTTCCCGCTA+TGG | + | chr5.3:7341543-7341562 | MS.gene21480:intron | 50.0% | |
TGTAGGCAATGGTTGCTCGT+GGG | + | chr5.3:7341744-7341763 | MS.gene21480:intron | 50.0% | |
TTATGGTACGTGGCGAACAG+GGG | + | chr5.3:7339496-7339515 | MS.gene21480:CDS | 50.0% | |
TTGTAGGCAATGGTTGCTCG+TGG | + | chr5.3:7341743-7341762 | MS.gene21480:intron | 50.0% | |
! | TCACCACATTCAAGTTCGCG+AGG | + | chr5.3:7344399-7344418 | MS.gene21480:CDS | 50.0% |
! | TTATGCATGCGGTGGCTCTA+AGG | + | chr5.3:7343491-7343510 | MS.gene21480:CDS | 50.0% |
!! | AGTGTGTTTGCTATCCTCGG+TGG | + | chr5.3:7342905-7342924 | MS.gene21480:intron | 50.0% |
AAAAGGAACCATGGCCACCG+AGG | - | chr5.3:7342922-7342941 | None:intergenic | 55.0% | |
AGCACAACCAATCTGGCGTG+CGG | + | chr5.3:7344369-7344388 | MS.gene21480:CDS | 55.0% | |
AGCTATGCAGGCAGCAGAGA+AGG | - | chr5.3:7342298-7342317 | None:intergenic | 55.0% | |
ATGGATTCCGCACGCCAGAT+TGG | - | chr5.3:7344379-7344398 | None:intergenic | 55.0% | |
ATTTGGGGGACGCGTTTGGA+TGG | - | chr5.3:7339314-7339333 | None:intergenic | 55.0% | |
CAACCGGAAGTTCAGCTCCA+AGG | - | chr5.3:7341772-7341791 | None:intergenic | 55.0% | |
CTATGCAGGCAGCAGAGAAG+GGG | - | chr5.3:7342296-7342315 | None:intergenic | 55.0% | |
GACGGCCTTTCTCAACTGAG+AGG | + | chr5.3:7342363-7342382 | MS.gene21480:intron | 55.0% | |
GATGCAGTAGCTCCAGTCAC+TGG | + | chr5.3:7341936-7341955 | MS.gene21480:intron | 55.0% | |
GCTATGCAGGCAGCAGAGAA+GGG | - | chr5.3:7342297-7342316 | None:intergenic | 55.0% | |
GGACCTTGGAGCTGAACTTC+CGG | + | chr5.3:7341766-7341785 | MS.gene21480:CDS | 55.0% | |
GGAGACGTTCTTCTCGTCGA+TGG | + | chr5.3:7339974-7339993 | MS.gene21480:CDS | 55.0% | |
GGTTATTTGGGGGACGCGTT+TGG | - | chr5.3:7339318-7339337 | None:intergenic | 55.0% | |
GTAGGCAATGGTTGCTCGTG+GGG | + | chr5.3:7341745-7341764 | MS.gene21480:intron | 55.0% | |
TACGAGAGTGGGAGACTGGT+TGG | - | chr5.3:7339345-7339364 | None:intergenic | 55.0% | |
TCATCCCACACCAACTAGGG+CGG | + | chr5.3:7342807-7342826 | MS.gene21480:CDS | 55.0% | |
TGCTGCAGACTAGAGCGTAG+AGG | + | chr5.3:7343635-7343654 | MS.gene21480:intron | 55.0% | |
! | ACTTCCGCCCTAGTTGGTGT+GGG | - | chr5.3:7342814-7342833 | None:intergenic | 55.0% |
! | TCCGGTGTCAGTGTCGTGTT+TGG | - | chr5.3:7339787-7339806 | None:intergenic | 55.0% |
! | TCTGAGACTTCCGCCCTAGT+TGG | - | chr5.3:7342820-7342839 | None:intergenic | 55.0% |
! | TTTGCTATCCTCGGTGGCCA+TGG | + | chr5.3:7342911-7342930 | MS.gene21480:intron | 55.0% |
!! | ACTCTGAGGCCTGAGGGTAT+TGG | - | chr5.3:7341622-7341641 | None:intergenic | 55.0% |
ATGGTTGCTCGTGGGGACCT+TGG | + | chr5.3:7341752-7341771 | MS.gene21480:CDS | 60.0% | |
GGCAGCAGAGAAGGGGATTC+CGG | - | chr5.3:7342289-7342308 | None:intergenic | 60.0% | |
! | AGTGGGAGACTGGTTGGAGG+AGG | - | chr5.3:7339339-7339358 | None:intergenic | 60.0% |
! | GACTTCCGCCCTAGTTGGTG+TGG | - | chr5.3:7342815-7342834 | None:intergenic | 60.0% |
! | GAGAGTGGGAGACTGGTTGG+AGG | - | chr5.3:7339342-7339361 | None:intergenic | 60.0% |
GGTACGTGGCGAACAGGGGA+AGG | + | chr5.3:7339500-7339519 | MS.gene21480:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.3 | gene | 7339179 | 7344432 | 7339179 | ID=MS.gene21480 |
chr5.3 | mRNA | 7339179 | 7344432 | 7339179 | ID=MS.gene21480.t1;Parent=MS.gene21480 |
chr5.3 | exon | 7339179 | 7339361 | 7339179 | ID=MS.gene21480.t1.exon1;Parent=MS.gene21480.t1 |
chr5.3 | CDS | 7339179 | 7339361 | 7339179 | ID=cds.MS.gene21480.t1;Parent=MS.gene21480.t1 |
chr5.3 | exon | 7339464 | 7339739 | 7339464 | ID=MS.gene21480.t1.exon2;Parent=MS.gene21480.t1 |
chr5.3 | CDS | 7339464 | 7339739 | 7339464 | ID=cds.MS.gene21480.t1;Parent=MS.gene21480.t1 |
chr5.3 | exon | 7339830 | 7339995 | 7339830 | ID=MS.gene21480.t1.exon3;Parent=MS.gene21480.t1 |
chr5.3 | CDS | 7339830 | 7339995 | 7339830 | ID=cds.MS.gene21480.t1;Parent=MS.gene21480.t1 |
chr5.3 | exon | 7340160 | 7340294 | 7340160 | ID=MS.gene21480.t1.exon4;Parent=MS.gene21480.t1 |
chr5.3 | CDS | 7340160 | 7340294 | 7340160 | ID=cds.MS.gene21480.t1;Parent=MS.gene21480.t1 |
chr5.3 | exon | 7340444 | 7340539 | 7340444 | ID=MS.gene21480.t1.exon5;Parent=MS.gene21480.t1 |
chr5.3 | CDS | 7340444 | 7340539 | 7340444 | ID=cds.MS.gene21480.t1;Parent=MS.gene21480.t1 |
chr5.3 | exon | 7340669 | 7340757 | 7340669 | ID=MS.gene21480.t1.exon6;Parent=MS.gene21480.t1 |
chr5.3 | CDS | 7340669 | 7340757 | 7340669 | ID=cds.MS.gene21480.t1;Parent=MS.gene21480.t1 |
chr5.3 | exon | 7341749 | 7341811 | 7341749 | ID=MS.gene21480.t1.exon7;Parent=MS.gene21480.t1 |
chr5.3 | CDS | 7341749 | 7341811 | 7341749 | ID=cds.MS.gene21480.t1;Parent=MS.gene21480.t1 |
chr5.3 | exon | 7342730 | 7342905 | 7342730 | ID=MS.gene21480.t1.exon8;Parent=MS.gene21480.t1 |
chr5.3 | CDS | 7342730 | 7342905 | 7342730 | ID=cds.MS.gene21480.t1;Parent=MS.gene21480.t1 |
chr5.3 | exon | 7343468 | 7343570 | 7343468 | ID=MS.gene21480.t1.exon9;Parent=MS.gene21480.t1 |
chr5.3 | CDS | 7343468 | 7343570 | 7343468 | ID=cds.MS.gene21480.t1;Parent=MS.gene21480.t1 |
chr5.3 | exon | 7343726 | 7343874 | 7343726 | ID=MS.gene21480.t1.exon10;Parent=MS.gene21480.t1 |
chr5.3 | CDS | 7343726 | 7343874 | 7343726 | ID=cds.MS.gene21480.t1;Parent=MS.gene21480.t1 |
chr5.3 | exon | 7344122 | 7344230 | 7344122 | ID=MS.gene21480.t1.exon11;Parent=MS.gene21480.t1 |
chr5.3 | CDS | 7344122 | 7344230 | 7344122 | ID=cds.MS.gene21480.t1;Parent=MS.gene21480.t1 |
chr5.3 | exon | 7344319 | 7344432 | 7344319 | ID=MS.gene21480.t1.exon12;Parent=MS.gene21480.t1 |
chr5.3 | CDS | 7344319 | 7344432 | 7344319 | ID=cds.MS.gene21480.t1;Parent=MS.gene21480.t1 |
Gene Sequence |
Protein sequence |