Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07416.t1 | XP_013468767.1 | 97 | 570 | 14 | 1 | 1 | 567 | 1 | 570 | 0.00E+00 | 1080.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07416.t1 | Q43117 | 89.7 | 515 | 51 | 1 | 53 | 567 | 71 | 583 | 1.0e-264 | 913.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07416.t1 | A0A072VLB0 | 97.0 | 570 | 14 | 1 | 1 | 567 | 1 | 570 | 0.0e+00 | 1080.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07416.t1 | MTR_1g076540 | 98.772 | 570 | 4 | 1 | 1 | 567 | 1 | 570 | 0.0 | 1160 |
MS.gene07416.t1 | MTR_1g105965 | 57.988 | 507 | 199 | 4 | 69 | 566 | 73 | 574 | 0.0 | 607 |
MS.gene07416.t1 | MTR_1g105965 | 59.077 | 325 | 128 | 3 | 69 | 393 | 73 | 392 | 1.96e-140 | 413 |
MS.gene07416.t1 | MTR_1g099360 | 41.379 | 580 | 299 | 11 | 1 | 561 | 1 | 558 | 2.80e-128 | 387 |
MS.gene07416.t1 | MTR_6g034195 | 45.397 | 478 | 237 | 8 | 86 | 561 | 105 | 560 | 1.50e-125 | 380 |
MS.gene07416.t1 | MTR_5g014140 | 43.277 | 476 | 248 | 7 | 87 | 561 | 78 | 532 | 5.86e-121 | 368 |
MS.gene07416.t1 | MTR_5g014140 | 48.936 | 329 | 152 | 5 | 87 | 414 | 78 | 391 | 1.10e-95 | 298 |
MS.gene07416.t1 | MTR_1g105965 | 53.750 | 240 | 107 | 2 | 66 | 305 | 70 | 305 | 2.09e-91 | 283 |
MS.gene07416.t1 | MTR_4g083340 | 32.860 | 493 | 288 | 11 | 87 | 554 | 8 | 482 | 6.16e-75 | 247 |
MS.gene07416.t1 | MTR_6g004020 | 30.661 | 499 | 291 | 11 | 87 | 554 | 21 | 495 | 2.02e-73 | 243 |
MS.gene07416.t1 | MTR_7g100760 | 31.936 | 501 | 282 | 12 | 87 | 554 | 11 | 485 | 3.40e-72 | 239 |
MS.gene07416.t1 | MTR_4g083330 | 31.616 | 427 | 227 | 10 | 87 | 500 | 11 | 385 | 3.79e-60 | 207 |
MS.gene07416.t1 | MTR_7g103420 | 25.806 | 465 | 317 | 11 | 88 | 543 | 30 | 475 | 2.31e-47 | 174 |
MS.gene07416.t1 | MTR_7g103420 | 25.968 | 439 | 300 | 10 | 88 | 517 | 30 | 452 | 5.65e-46 | 169 |
MS.gene07416.t1 | MTR_1g091040 | 27.054 | 499 | 310 | 12 | 88 | 552 | 30 | 508 | 1.65e-44 | 166 |
MS.gene07416.t1 | MTR_1g061630 | 24.494 | 445 | 299 | 10 | 88 | 517 | 30 | 452 | 4.94e-42 | 159 |
MS.gene07416.t1 | MTR_1g061630 | 25.056 | 443 | 279 | 12 | 88 | 515 | 30 | 434 | 5.37e-41 | 155 |
MS.gene07416.t1 | MTR_7g103420 | 25.858 | 379 | 256 | 10 | 148 | 517 | 1 | 363 | 1.88e-35 | 138 |
MS.gene07416.t1 | MTR_1g091040 | 28.338 | 367 | 221 | 10 | 212 | 552 | 25 | 375 | 2.17e-32 | 129 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07416.t1 | AT3G22960 | 77.273 | 594 | 98 | 4 | 9 | 567 | 5 | 596 | 0.0 | 929 |
MS.gene07416.t1 | AT5G52920 | 45.073 | 477 | 240 | 8 | 86 | 561 | 110 | 565 | 1.17e-126 | 384 |
MS.gene07416.t1 | AT1G32440 | 44.835 | 484 | 234 | 8 | 84 | 561 | 97 | 553 | 1.07e-124 | 378 |
MS.gene07416.t1 | AT5G63680 | 31.141 | 517 | 302 | 14 | 67 | 554 | 4 | 495 | 2.16e-73 | 243 |
MS.gene07416.t1 | AT5G63680 | 31.141 | 517 | 302 | 14 | 67 | 554 | 4 | 495 | 2.16e-73 | 243 |
MS.gene07416.t1 | AT5G63680 | 31.141 | 517 | 302 | 14 | 67 | 554 | 4 | 495 | 2.16e-73 | 243 |
MS.gene07416.t1 | AT5G08570 | 31.590 | 497 | 289 | 12 | 87 | 554 | 21 | 495 | 3.06e-73 | 243 |
MS.gene07416.t1 | AT5G08570 | 31.590 | 497 | 289 | 12 | 87 | 554 | 21 | 495 | 3.06e-73 | 243 |
MS.gene07416.t1 | AT5G08570 | 31.590 | 497 | 289 | 12 | 87 | 554 | 21 | 495 | 3.06e-73 | 243 |
MS.gene07416.t1 | AT4G26390 | 31.633 | 490 | 298 | 10 | 87 | 554 | 8 | 482 | 1.19e-72 | 241 |
MS.gene07416.t1 | AT3G04050 | 30.528 | 511 | 306 | 12 | 87 | 566 | 17 | 509 | 2.55e-72 | 240 |
MS.gene07416.t1 | AT3G25960 | 32.091 | 483 | 296 | 11 | 87 | 554 | 17 | 482 | 5.35e-72 | 239 |
MS.gene07416.t1 | AT3G55650 | 31.388 | 497 | 294 | 12 | 87 | 554 | 17 | 495 | 8.71e-72 | 239 |
MS.gene07416.t1 | AT5G56350 | 31.579 | 494 | 293 | 12 | 87 | 554 | 9 | 483 | 9.04e-71 | 236 |
MS.gene07416.t1 | AT3G55810 | 29.839 | 496 | 285 | 12 | 87 | 554 | 17 | 477 | 7.35e-60 | 206 |
MS.gene07416.t1 | AT3G52990 | 26.304 | 441 | 296 | 10 | 88 | 517 | 30 | 452 | 4.89e-44 | 164 |
MS.gene07416.t1 | AT3G52990 | 26.429 | 420 | 274 | 11 | 112 | 517 | 1 | 399 | 2.70e-39 | 150 |
MS.gene07416.t1 | AT2G36580 | 24.766 | 428 | 287 | 8 | 88 | 500 | 30 | 437 | 5.75e-39 | 150 |
MS.gene07416.t1 | AT3G49160 | 36.000 | 150 | 86 | 5 | 264 | 407 | 534 | 679 | 1.50e-20 | 96.3 |
MS.gene07416.t1 | AT3G49160 | 36.000 | 150 | 86 | 5 | 264 | 407 | 446 | 591 | 1.62e-20 | 95.9 |
Find 152 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCCGATGCTTTGATGCTTTC+TGG | 0.070125 | 1.2:+63937068 | MS.gene07416:CDS |
TGCATCCACTTCTAAATTAT+TGG | 0.144185 | 1.2:-63937754 | None:intergenic |
AATACAGTTAAGGCTTTATC+AGG | 0.177661 | 1.2:-63937113 | None:intergenic |
CAAGAGCAAATCTCACTTTC+TGG | 0.232110 | 1.2:+63932144 | MS.gene07416:CDS |
ACCTTCATAATTGACATTAA+TGG | 0.233399 | 1.2:-63931172 | None:intergenic |
ACCAGATTTGATCAGATTTC+TGG | 0.237090 | 1.2:-63937973 | None:intergenic |
GATTGGTTAGACATTGATTT+TGG | 0.245083 | 1.2:+63934028 | MS.gene07416:CDS |
CGTAGACTTAACCATCAAAA+AGG | 0.295700 | 1.2:+63930900 | MS.gene07416:CDS |
ATAAAGCCTTAACTGTATTA+AGG | 0.307867 | 1.2:+63937117 | MS.gene07416:CDS |
AACGGATTGTTCAAGTTTGC+AGG | 0.310130 | 1.2:+63936934 | MS.gene07416:CDS |
ACCAAACTTGTCTGCACTAT+TGG | 0.311543 | 1.2:+63930759 | MS.gene07416:CDS |
GGAAGGAGAGGGTGGGAGAT+GGG | 0.324461 | 1.2:-63930575 | None:intergenic |
AGAGGGTGGGAGATGGGAAG+TGG | 0.329576 | 1.2:-63930569 | None:intergenic |
TTTGGATCTGAGGTTGGTGG+TGG | 0.340648 | 1.2:-63930669 | None:intergenic |
TGGGGTGGCGCCGTTGTTGT+CGG | 0.344160 | 1.2:-63930649 | None:intergenic |
AGGGTGGGAGATGGGAAGTG+GGG | 0.344221 | 1.2:-63930567 | None:intergenic |
GGAGTGGAAGTTTGAGGTTG+GGG | 0.350462 | 1.2:-63930538 | None:intergenic |
AAAGGTTGGGGATGATCTTT+TGG | 0.358310 | 1.2:+63932034 | MS.gene07416:CDS |
TAAAACCTTCGCATTGCTTA+AGG | 0.358541 | 1.2:+63937950 | MS.gene07416:CDS |
TCTGAGCTTCTCTGATGATA+TGG | 0.366260 | 1.2:+63937914 | MS.gene07416:CDS |
GGGAGTGGAAGTTTGAGGTT+GGG | 0.369435 | 1.2:-63930539 | None:intergenic |
GGAGTGTGGGAAAGCGGCGG+AGG | 0.371592 | 1.2:-63930599 | None:intergenic |
GGGGTGGCGCCGTTGTTGTC+GGG | 0.374689 | 1.2:-63930648 | None:intergenic |
GCGTCGACTTCGATTGTGTT+TGG | 0.375166 | 1.2:-63930687 | None:intergenic |
TGGAGGAATGGTTAGGTTTG+AGG | 0.375371 | 1.2:+63932061 | MS.gene07416:CDS |
GGGTGGGAGATGGGAAGTGG+GGG | 0.380072 | 1.2:-63930566 | None:intergenic |
TTGGATCTGAGGTTGGTGGT+GGG | 0.390256 | 1.2:-63930668 | None:intergenic |
TGGGAGTGGAAGTTTGAGGT+TGG | 0.390508 | 1.2:-63930540 | None:intergenic |
GATTGTTAAGTGGGAGGTTG+AGG | 0.391226 | 1.2:-63930625 | None:intergenic |
TTGCTAATAGATGTAAAGGT+TGG | 0.393660 | 1.2:+63932020 | MS.gene07416:intron |
TGCTCTTGGTAGCAACAATC+CGG | 0.394268 | 1.2:-63932129 | None:intergenic |
TCTGCTACTTCAGCTCTTGT+AGG | 0.395173 | 1.2:-63937020 | None:intergenic |
GGGAAGGAGAGGGTGGGAGA+TGG | 0.397055 | 1.2:-63930576 | None:intergenic |
GGTGTGGGAGTGGAAGTTTG+AGG | 0.397278 | 1.2:-63930544 | None:intergenic |
GAGGGTGGGAGATGGGAAGT+GGG | 0.397541 | 1.2:-63930568 | None:intergenic |
TTTGAGGTCATTGAAAAGAT+TGG | 0.398320 | 1.2:+63932077 | MS.gene07416:CDS |
CTTGAAGCTCTTGCTGTTGG+TGG | 0.400650 | 1.2:+63930807 | MS.gene07416:CDS |
TGCTAATAGATGTAAAGGTT+GGG | 0.402068 | 1.2:+63932021 | MS.gene07416:intron |
GAGTGGAAGTTTGAGGTTGG+GGG | 0.403213 | 1.2:-63930537 | None:intergenic |
GTGTGGGAAAGCGGCGGAGG+GGG | 0.403996 | 1.2:-63930596 | None:intergenic |
ACCAATAGTGCAGACAAGTT+TGG | 0.405218 | 1.2:-63930760 | None:intergenic |
GCCAGAAATCTGATCAAATC+TGG | 0.405901 | 1.2:+63937972 | MS.gene07416:CDS |
ATTCATATGGGTGATCTTGC+TGG | 0.407295 | 1.2:+63930963 | MS.gene07416:CDS |
AGCTGAGAGGCCACAATGAC+AGG | 0.408415 | 1.2:-63936969 | None:intergenic |
TGGTTGATGGAGGAATGGTT+AGG | 0.413565 | 1.2:+63932054 | MS.gene07416:CDS |
GACACTCCTTAATACAGTTA+AGG | 0.421147 | 1.2:-63937123 | None:intergenic |
ACCATTAATGTCAATTATGA+AGG | 0.423340 | 1.2:+63931171 | MS.gene07416:CDS |
ATGCAATTCAGCTGCAAAGA+TGG | 0.426671 | 1.2:+63937247 | MS.gene07416:CDS |
TTGCTGCACGATCTCGTGAT+AGG | 0.441018 | 1.2:+63934128 | MS.gene07416:CDS |
GTGCAAAGACACTTCACATC+TGG | 0.442846 | 1.2:-63932101 | None:intergenic |
GTGGTAGTAAAAGCAAATAT+TGG | 0.444965 | 1.2:-63937840 | None:intergenic |
GAAACCTTTGAGGAGATTGT+AGG | 0.447663 | 1.2:-63932206 | None:intergenic |
AGCTCAGATACCCTTGGAAC+AGG | 0.447772 | 1.2:+63936896 | MS.gene07416:CDS |
TTAAGGCTTTATCAGGGAAC+TGG | 0.447886 | 1.2:-63937106 | None:intergenic |
GGGTAAAGAGTTGGAAATGG+AGG | 0.449184 | 1.2:-63930515 | None:intergenic |
TTGTTTAGGATGGTGAGATC+TGG | 0.451944 | 1.2:+63931100 | MS.gene07416:intron |
AGTGGAAGTTTGAGGTTGGG+GGG | 0.452083 | 1.2:-63930536 | None:intergenic |
TTTGAGCTCTGTTTCGGTAA+CGG | 0.452765 | 1.2:-63930709 | None:intergenic |
TATTGATTCGCTGAAGAACT+TGG | 0.454753 | 1.2:+63936821 | MS.gene07416:CDS |
TATGGTAGCACGTGGAGACT+TGG | 0.455967 | 1.2:+63936872 | MS.gene07416:CDS |
TGAAGGAAGTGAGATTCATA+TGG | 0.456659 | 1.2:+63930950 | MS.gene07416:CDS |
TGGATCTGAGGTTGGTGGTG+GGG | 0.461077 | 1.2:-63930667 | None:intergenic |
TGTTGTCGGGGATTGTTAAG+TGG | 0.467619 | 1.2:-63930635 | None:intergenic |
CAGATGTTTCTGAAGCAGTC+AGG | 0.474154 | 1.2:+63937039 | MS.gene07416:CDS |
GGTGGGAGATGGGAAGTGGG+GGG | 0.476401 | 1.2:-63930565 | None:intergenic |
AAAGGAGTTGGAAACCTTTG+AGG | 0.479069 | 1.2:-63932216 | None:intergenic |
TGGTCGAAGCCGCATGTGGC+GGG | 0.482332 | 1.2:-63930783 | None:intergenic |
AGTGTGGGAAAGCGGCGGAG+GGG | 0.485294 | 1.2:-63930597 | None:intergenic |
AAAGCAAATATTGGACAGTC+AGG | 0.489365 | 1.2:-63937831 | None:intergenic |
GAAGCATCGCATTCCTCTCT+CGG | 0.490824 | 1.2:-63932184 | None:intergenic |
ACAATCCGTTGTTGAGCAGC+TGG | 0.495284 | 1.2:-63936921 | None:intergenic |
TTCGATTGTGTTTGGATCTG+AGG | 0.497017 | 1.2:-63930679 | None:intergenic |
GGAGGTTGAGGCGCGGAGTG+TGG | 0.500274 | 1.2:-63930613 | None:intergenic |
TTAATGGTACGTTCCGGAGT+TGG | 0.504252 | 1.2:-63931156 | None:intergenic |
GTTGTCGGGGATTGTTAAGT+GGG | 0.504588 | 1.2:-63930634 | None:intergenic |
CTATGCAACTCCCATCCGTT+GGG | 0.504939 | 1.2:+63937192 | MS.gene07416:CDS |
TGAGAATCGAAAGGTGGTGG+AGG | 0.509923 | 1.2:+63937150 | MS.gene07416:CDS |
GGGTGGCGCCGTTGTTGTCG+GGG | 0.509976 | 1.2:-63930647 | None:intergenic |
GAGGTTGAGGCGCGGAGTGT+GGG | 0.511194 | 1.2:-63930612 | None:intergenic |
GTGGAAGTTTGAGGTTGGGG+GGG | 0.513969 | 1.2:-63930535 | None:intergenic |
ATTTGCGGTTGCGATTATGA+TGG | 0.518614 | 1.2:+63930923 | MS.gene07416:CDS |
TGCAATTCAGCTGCAAAGAT+GGG | 0.522176 | 1.2:+63937248 | MS.gene07416:CDS |
CTTTCTGGTGAGTCAGCAAT+GGG | 0.522401 | 1.2:+63937083 | MS.gene07416:CDS |
GAGTGTGGGAAAGCGGCGGA+GGG | 0.524962 | 1.2:-63930598 | None:intergenic |
GTGTTTGGATCTGAGGTTGG+TGG | 0.525993 | 1.2:-63930672 | None:intergenic |
TTGACATTAATGGTACGTTC+CGG | 0.528790 | 1.2:-63931162 | None:intergenic |
ATTGTGTTTGGATCTGAGGT+TGG | 0.531515 | 1.2:-63930675 | None:intergenic |
GTCGGGGATTGTTAAGTGGG+AGG | 0.533397 | 1.2:-63930631 | None:intergenic |
CAGCTTGAAGCTCTTGCTGT+TGG | 0.534592 | 1.2:+63930804 | MS.gene07416:CDS |
GCTTTCTGGTGAGTCAGCAA+TGG | 0.535517 | 1.2:+63937082 | MS.gene07416:CDS |
AAGTGTCTTTGCACTGATCC+CGG | 0.535675 | 1.2:+63932110 | MS.gene07416:CDS |
CTGGTCGAAGCCGCATGTGG+CGG | 0.537233 | 1.2:-63930784 | None:intergenic |
GCTATGCAACTCCCATCCGT+TGG | 0.537887 | 1.2:+63937191 | MS.gene07416:CDS |
TGATTCGACTCTTCCAACTC+CGG | 0.540249 | 1.2:+63931143 | MS.gene07416:CDS |
ATCTGAGGTTGGTGGTGGGG+TGG | 0.540960 | 1.2:-63930664 | None:intergenic |
GAAACAGAGCTCAAAGAAAA+CGG | 0.541134 | 1.2:+63930717 | MS.gene07416:CDS |
CAGAAAGTGAGATTTGCTCT+TGG | 0.544355 | 1.2:-63932143 | None:intergenic |
TGTGTCATGGTACACGAGAA+TGG | 0.544648 | 1.2:+63930853 | MS.gene07416:CDS |
AATCTCACTTTCTGGAGGAA+TGG | 0.549968 | 1.2:+63932152 | MS.gene07416:CDS |
CAATAGAGATGCCATGTGCC+CGG | 0.551351 | 1.2:-63937796 | None:intergenic |
TGCAGCCAATAATTTAGAAG+TGG | 0.551934 | 1.2:+63937749 | MS.gene07416:intron |
CTTGGGAGCTCAGATACCCT+TGG | 0.552377 | 1.2:+63936890 | MS.gene07416:CDS |
ACTTCAGCTCTTGTAGGTGT+AGG | 0.555362 | 1.2:-63937014 | None:intergenic |
GTTTGAGAATCGAAAGGTGG+TGG | 0.555404 | 1.2:+63937147 | MS.gene07416:CDS |
TGATTCGCTGAAGAACTTGG+AGG | 0.556449 | 1.2:+63936824 | MS.gene07416:CDS |
ATGGTAGCACGTGGAGACTT+GGG | 0.556840 | 1.2:+63936873 | MS.gene07416:CDS |
AGCAGCTGGAACCTGTTCCA+AGG | 0.556999 | 1.2:-63936907 | None:intergenic |
TCAAGCATCAGACGGAGCTA+TGG | 0.562002 | 1.2:+63936854 | MS.gene07416:CDS |
GTTTGGTTCTTCTTGTACTG+CGG | 0.569336 | 1.2:-63930743 | None:intergenic |
TAGACGTCTGAACCTCCAGT+GGG | 0.569689 | 1.2:+63937875 | MS.gene07416:CDS |
TATCTGAGACAGCAATTACA+AGG | 0.572139 | 1.2:-63937998 | None:intergenic |
GTTGTTGCTAATAGATGTAA+AGG | 0.572197 | 1.2:+63932016 | MS.gene07416:intron |
GCTCTTGGTAGCAACAATCC+GGG | 0.573314 | 1.2:-63932128 | None:intergenic |
GGAAAGGTATCAAGCCCCAC+TGG | 0.573982 | 1.2:-63937890 | None:intergenic |
GGTAAAGAGTTGGAAATGGA+GGG | 0.575421 | 1.2:-63930514 | None:intergenic |
GAGAATCGAAAGGTGGTGGA+GGG | 0.578837 | 1.2:+63937151 | MS.gene07416:CDS |
GCTTCCTACAATCTCCTCAA+AGG | 0.583056 | 1.2:+63932202 | MS.gene07416:CDS |
ACCAGAAAGCATCAAAGCAT+CGG | 0.586668 | 1.2:-63937069 | None:intergenic |
AGGCGCGGAGTGTGGGAAAG+CGG | 0.587311 | 1.2:-63930605 | None:intergenic |
CAACAGCAAGAGCTTCAAGC+TGG | 0.587335 | 1.2:-63930803 | None:intergenic |
GAAGGAAGTGAGATTCATAT+GGG | 0.590954 | 1.2:+63930951 | MS.gene07416:CDS |
TCAGAGAAGCTCAGACGGAA+AGG | 0.593484 | 1.2:-63937906 | None:intergenic |
AGGTGTAGGATATTCAATCA+TGG | 0.594256 | 1.2:-63937000 | None:intergenic |
CGCGGAGTGTGGGAAAGCGG+CGG | 0.599918 | 1.2:-63930602 | None:intergenic |
AAGCTGGTCGAAGCCGCATG+TGG | 0.600202 | 1.2:-63930787 | None:intergenic |
ATACAGTTAAGGCTTTATCA+GGG | 0.602619 | 1.2:-63937112 | None:intergenic |
GCTAATAGATGTAAAGGTTG+GGG | 0.603304 | 1.2:+63932022 | MS.gene07416:intron |
CAAATATTGGACAGTCAGGA+CGG | 0.604120 | 1.2:-63937827 | None:intergenic |
TATCATCAGAGAAGCTCAGA+CGG | 0.606933 | 1.2:-63937911 | None:intergenic |
AATGAATAAACCTGTCATTG+TGG | 0.607534 | 1.2:+63936959 | MS.gene07416:CDS |
GCTAGAATCAACATGTGTCA+TGG | 0.612928 | 1.2:+63930840 | MS.gene07416:CDS |
TCTGGCCTTAAGCAATGCGA+AGG | 0.616732 | 1.2:-63937955 | None:intergenic |
ATGGTAGTTTAGTCCGAGAG+AGG | 0.622882 | 1.2:+63932171 | MS.gene07416:CDS |
TTACACAAAGACCGGGCACA+TGG | 0.623603 | 1.2:+63937785 | MS.gene07416:CDS |
GCAGCTGGAACCTGTTCCAA+GGG | 0.625477 | 1.2:-63936906 | None:intergenic |
TTCAGACGTCTACGCACAGA+CGG | 0.634872 | 1.2:-63937864 | None:intergenic |
GAGATCATTCAAGCATCAGA+CGG | 0.637912 | 1.2:+63936846 | MS.gene07416:CDS |
ACGTCTACGCACAGACGGAG+TGG | 0.639521 | 1.2:-63937859 | None:intergenic |
TTAACAATCCCCGACAACAA+CGG | 0.639831 | 1.2:+63930639 | MS.gene07416:CDS |
GAGCAAATCTCACTTTCTGG+AGG | 0.645342 | 1.2:+63932147 | MS.gene07416:CDS |
GCGATTATGATGGATACTGA+AGG | 0.647102 | 1.2:+63930933 | MS.gene07416:CDS |
AGGTTCCAGCTGCTCAACAA+CGG | 0.648388 | 1.2:+63936916 | MS.gene07416:CDS |
ACTATTGGTCCCGCCACATG+CGG | 0.652389 | 1.2:+63930774 | MS.gene07416:CDS |
GTGTCAGTTTGAGAATCGAA+AGG | 0.659935 | 1.2:+63937141 | MS.gene07416:CDS |
GACGGAGCTATGGTAGCACG+TGG | 0.676133 | 1.2:+63936864 | MS.gene07416:CDS |
AAGGTATCAAGCCCCACTGG+AGG | 0.679367 | 1.2:-63937887 | None:intergenic |
GTAGACGTCTGAACCTCCAG+TGG | 0.689473 | 1.2:+63937874 | MS.gene07416:CDS |
TCAGTTTGAGAATCGAAAGG+TGG | 0.691228 | 1.2:+63937144 | MS.gene07416:CDS |
CATGGACTCAAGTAGCTGAG+AGG | 0.701367 | 1.2:-63936982 | None:intergenic |
GAGGGTGCGAATAGCTGACA+TGG | 0.708183 | 1.2:-63930496 | None:intergenic |
TTAAGTGGGAGGTTGAGGCG+CGG | 0.712305 | 1.2:-63930620 | None:intergenic |
AGACGTCTGAACCTCCAGTG+GGG | 0.736828 | 1.2:+63937876 | MS.gene07416:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.2 | gene | 63930498 | 63938055 | 63930498 | ID=MS.gene07416 |
chr1.2 | mRNA | 63930498 | 63938055 | 63930498 | ID=MS.gene07416.t1;Parent=MS.gene07416 |
chr1.2 | exon | 63930498 | 63931007 | 63930498 | ID=MS.gene07416.t1.exon1;Parent=MS.gene07416.t1 |
chr1.2 | CDS | 63930498 | 63931007 | 63930498 | ID=cds.MS.gene07416.t1;Parent=MS.gene07416.t1 |
chr1.2 | exon | 63931108 | 63931204 | 63931108 | ID=MS.gene07416.t1.exon2;Parent=MS.gene07416.t1 |
chr1.2 | CDS | 63931108 | 63931204 | 63931108 | ID=cds.MS.gene07416.t1;Parent=MS.gene07416.t1 |
chr1.2 | exon | 63932030 | 63932223 | 63932030 | ID=MS.gene07416.t1.exon3;Parent=MS.gene07416.t1 |
chr1.2 | CDS | 63932030 | 63932223 | 63932030 | ID=cds.MS.gene07416.t1;Parent=MS.gene07416.t1 |
chr1.2 | exon | 63934028 | 63934149 | 63934028 | ID=MS.gene07416.t1.exon4;Parent=MS.gene07416.t1 |
chr1.2 | CDS | 63934028 | 63934149 | 63934028 | ID=cds.MS.gene07416.t1;Parent=MS.gene07416.t1 |
chr1.2 | exon | 63936791 | 63937269 | 63936791 | ID=MS.gene07416.t1.exon5;Parent=MS.gene07416.t1 |
chr1.2 | CDS | 63936791 | 63937269 | 63936791 | ID=cds.MS.gene07416.t1;Parent=MS.gene07416.t1 |
chr1.2 | exon | 63937754 | 63938055 | 63937754 | ID=MS.gene07416.t1.exon6;Parent=MS.gene07416.t1 |
chr1.2 | CDS | 63937754 | 63938055 | 63937754 | ID=cds.MS.gene07416.t1;Parent=MS.gene07416.t1 |
Gene Sequence |
Protein sequence |