AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene51552


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene51552.t1 MTR_1g012370 95.575 565 22 1 1 565 16 577 0.0 1130
MS.gene51552.t1 MTR_1g012370 97.269 476 13 0 90 565 1 476 0.0 972
MS.gene51552.t1 MTR_1g012370 97.351 453 12 0 113 565 1 453 0.0 927
MS.gene51552.t1 MTR_4g129950 32.239 335 171 9 172 506 150 428 2.25e-45 167
MS.gene51552.t1 MTR_4g129950 31.802 283 137 9 171 453 149 375 3.29e-33 131
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene51552.t1 AT2G25530 64.925 536 180 4 33 565 98 628 0.0 732
MS.gene51552.t1 AT2G25530 63.758 447 154 4 33 476 98 539 0.0 595
MS.gene51552.t1 AT4G28070 31.402 328 170 9 179 506 134 406 3.68e-42 158
MS.gene51552.t1 AT4G30490 30.473 338 176 10 172 506 154 435 4.04e-42 159
MS.gene51552.t1 AT4G28070 30.793 328 163 10 179 506 134 397 2.70e-37 144

Find 126 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAAAACCTTCTTTCTAATT+TGG 0.118749 1.4:+8646732 MS.gene51552:CDS
GCAACTCCCTCGCAGCTTTC+AGG 0.157546 1.4:-8648264 None:intergenic
GTTAGGTTAATCTATCTAAT+TGG 0.161961 1.4:+8644083 MS.gene51552:intron
TGGATCCAGGGGTAGGAAAA+TGG 0.233069 1.4:+8644495 MS.gene51552:CDS
TTTGCTATTGTGGCTTTATC+TGG 0.250196 1.4:+8646404 MS.gene51552:CDS
CCCAAAGGACTTTACATATA+TGG 0.303298 1.4:+8644587 MS.gene51552:CDS
GCCATATATGTAAAGTCCTT+TGG 0.312948 1.4:-8644588 None:intergenic
CCAAATTAGAAAGAAGGTTT+TGG 0.313607 1.4:-8646732 None:intergenic
CAGGATGCAACAGGCAGATT+TGG 0.318576 1.4:+8648105 MS.gene51552:CDS
GCTCTGTAGCAACAGTTTCT+TGG 0.326843 1.4:-8643912 None:intergenic
CTCTTCCTGACCAGATAGTA+TGG 0.342314 1.4:-8651807 None:intergenic
TTGATGGTTTCCCTTTCAAT+AGG 0.346062 1.4:-8648063 None:intergenic
TTGAGATTGGAAATGTGAAT+TGG 0.363751 1.4:-8643033 None:intergenic
TTAGGTTAATCTATCTAATT+GGG 0.371026 1.4:+8644084 MS.gene51552:intron
CGGGAGTTGGAGGTTGAGAT+TGG 0.374547 1.4:-8643046 None:intergenic
AGCTTCAGAATTTGTTATCA+AGG 0.390844 1.4:+8643932 MS.gene51552:CDS
TCAGAATTTGTTATCAAGGT+TGG 0.392889 1.4:+8643936 MS.gene51552:CDS
GGATCAAGAAGGAGAAGAAA+AGG 0.396933 1.4:+8645833 MS.gene51552:CDS
TCCTTAGCTTTAGTGTCAAA+TGG 0.397452 1.4:-8645729 None:intergenic
TCAATTGATGAATTATTTCA+AGG 0.400199 1.4:+8649388 MS.gene51552:CDS
AGTATGGATGTGATGCCAAC+AGG 0.401938 1.4:-8651791 None:intergenic
CGGAATTACGCGGGAGTTGG+AGG 0.404984 1.4:-8643056 None:intergenic
AAACAATGAGAAGAAGAATC+TGG 0.405934 1.4:+8642981 None:intergenic
CCATATATGTAAAGTCCTTT+GGG 0.406905 1.4:-8644587 None:intergenic
GGCATCACATCCATACTATC+TGG 0.409263 1.4:+8651797 MS.gene51552:CDS
TGAGCGGCGAAGGATTCTTA+TGG 0.409862 1.4:+8644123 MS.gene51552:CDS
TTTGTGCTTTGATGAGATAC+AGG 0.410864 1.4:+8645866 MS.gene51552:CDS
GATCTTCCAAATTAGAAAGA+AGG 0.414619 1.4:-8646738 None:intergenic
TCATTCTTGTCTATGTTGCT+TGG 0.415282 1.4:+8649357 MS.gene51552:CDS
TGATGGTTTCCCTTTCAATA+GGG 0.415283 1.4:-8648062 None:intergenic
CACACCTCATTCAAGTCCTT+TGG 0.415615 1.4:-8646485 None:intergenic
TCTTAAACGTGAGAAGAAGT+TGG 0.425289 1.4:+8644526 MS.gene51552:CDS
TAGCACAAAGATCAGAAAAC+CGG 0.431848 1.4:+8646809 MS.gene51552:CDS
CTTCAGCCTCTGTTTCAAAC+TGG 0.432094 1.4:-8651712 None:intergenic
AAGAAGTTGGATTCAGTAGT+TGG 0.438282 1.4:+8644539 MS.gene51552:CDS
ACTATTTATGCCCTATTGAA+AGG 0.454914 1.4:+8648052 MS.gene51552:CDS
GGAGAATTATGAGAGAGAAA+TGG 0.457162 1.4:+8643957 MS.gene51552:CDS
CTATTTATGCCCTATTGAAA+GGG 0.458438 1.4:+8648053 MS.gene51552:CDS
CACATCCATACTATCTGGTC+AGG 0.459198 1.4:+8651802 MS.gene51552:CDS
AACACCATTTCAGTGATGTT+CGG 0.464460 1.4:+8648144 MS.gene51552:CDS
TGTTGATGTATTTGCTATTG+TGG 0.467315 1.4:+8646394 MS.gene51552:CDS
GAAGAGAAGCCTTTGCAGTC+AGG 0.468263 1.4:+8645681 MS.gene51552:CDS
AGACCGGAGAATGTGGATCC+AGG 0.470251 1.4:+8644482 MS.gene51552:CDS
CCTTCCGAACATCACTGAAA+TGG 0.470791 1.4:-8648148 None:intergenic
GGGATGAACCTGGACGGTTA+TGG 0.470890 1.4:-8643117 None:intergenic
GGATCCAGGGGTAGGAAAAT+GGG 0.471492 1.4:+8644496 MS.gene51552:CDS
ACCCCTGGATCCACATTCTC+CGG 0.477592 1.4:-8644485 None:intergenic
CGAATGCGCATGCTCATCAC+TGG 0.477595 1.4:-8649048 None:intergenic
ATGTAAAGTCCTTTGGGAGC+TGG 0.488973 1.4:-8644581 None:intergenic
GTAGCAACAGTTTCTTGGTA+AGG 0.490928 1.4:-8643907 None:intergenic
GCAGAAGGCAACGTGGGCTC+AGG 0.491325 1.4:+8651761 MS.gene51552:CDS
TGACTATCTATGTGGTCGTC+CGG 0.499564 1.4:+8648299 MS.gene51552:CDS
AAACGGAATTACGCGGGAGT+TGG 0.500568 1.4:-8643059 None:intergenic
CAAGACATGGAAGAAACAAA+TGG 0.504054 1.4:+8645659 MS.gene51552:CDS
TTGGGAGCTGGAGGAGCAGT+TGG 0.506316 1.4:-8644569 None:intergenic
AGCAGCAGAATGACAAGGAT+TGG 0.507679 1.4:+8644158 MS.gene51552:CDS
GATGCAACAGGCAGATTTGG+AGG 0.510110 1.4:+8648108 MS.gene51552:CDS
TCCATTTGACACTAAAGCTA+AGG 0.519936 1.4:+8645728 MS.gene51552:CDS
ATAATAAAATCACTGAAAGA+TGG 0.521637 1.4:+8644194 MS.gene51552:CDS
GGCTCAGGAGGTACCCCTGT+TGG 0.522358 1.4:+8651776 MS.gene51552:CDS
TAGATAGTCAAATGTAAAGC+GGG 0.527142 1.4:-8648286 None:intergenic
TGGAATATCAGATATGAAAA+CGG 0.530816 1.4:-8649028 None:intergenic
TTTACATTTGACTATCTATG+TGG 0.531968 1.4:+8648291 MS.gene51552:CDS
CAGTTTGAAACAGAGGCTGA+AGG 0.533189 1.4:+8651713 MS.gene51552:CDS
GACCGGAGAATGTGGATCCA+GGG 0.536182 1.4:+8644483 MS.gene51552:CDS
CAGTTTCCAGTTTGAAACAG+AGG 0.543306 1.4:+8651706 MS.gene51552:intron
ATGTTCATTTATTCTCAGCA+TGG 0.544311 1.4:-8645631 None:intergenic
CAGGAAAAGACCGGAGAATG+TGG 0.546258 1.4:+8644475 MS.gene51552:intron
CTGAAAGATGGACAAACTCT+AGG 0.548929 1.4:+8644206 MS.gene51552:CDS
CTAAGCAGATTGCTGAGTAG+TGG 0.551063 1.4:+8646431 MS.gene51552:CDS
AGAAGAAAGATACAAGAAAG+AGG 0.556135 1.4:+8645764 MS.gene51552:CDS
GTCTTAGCAGAAGGCAACGT+GGG 0.556790 1.4:+8651755 MS.gene51552:CDS
CGCCGCGATGTCTTAGCAGA+AGG 0.558774 1.4:+8651746 MS.gene51552:CDS
GAACATCACTGAAATGGTGT+TGG 0.561502 1.4:-8648142 None:intergenic
CATTGTGAGAAGGTGTTGGT+AGG 0.563706 1.4:+8646760 MS.gene51552:CDS
ATGAACATATGCACAAGACA+TGG 0.570304 1.4:+8645646 MS.gene51552:CDS
ATAGGGAGAATGAGCGGCGA+AGG 0.570990 1.4:+8644113 MS.gene51552:CDS
TGCAGTCAGGCATTGCAAGT+TGG 0.571546 1.4:+8645694 MS.gene51552:CDS
CTTGCAATGCCTGACTGCAA+AGG 0.573619 1.4:-8645690 None:intergenic
ATATATGGCAATGTGGGCAG+TGG 0.574246 1.4:+8644602 MS.gene51552:CDS
GAGGTTCCTGAAAGCTGCGA+GGG 0.575011 1.4:+8648258 MS.gene51552:CDS
GAATAGTTAAACATCGAAGA+AGG 0.576214 1.4:+8645410 MS.gene51552:CDS
CTTTACATATATGGCAATGT+GGG 0.576308 1.4:+8644596 MS.gene51552:CDS
GATCAAGAAGGAGAAGAAAA+GGG 0.580502 1.4:+8645834 MS.gene51552:CDS
TTGAAACAGAGGCTGAAGGC+GGG 0.583908 1.4:+8651717 MS.gene51552:CDS
AGCAGAATGACAAGGATTGG+TGG 0.584067 1.4:+8644161 MS.gene51552:CDS
GAAGGCAACGTGGGCTCAGG+AGG 0.585167 1.4:+8651764 MS.gene51552:CDS
TACAAGTAATCGAGCACCAA+AGG 0.585685 1.4:+8646469 MS.gene51552:CDS
GAGCATGCGCATTCGTGACA+AGG 0.591327 1.4:+8649056 MS.gene51552:CDS
CCATTTCAGTGATGTTCGGA+AGG 0.596470 1.4:+8648148 MS.gene51552:CDS
ATTCTCAACCATAACCGTCC+AGG 0.597324 1.4:+8643109 MS.gene51552:CDS
TTTGGAAGATCATTGTGAGA+AGG 0.598544 1.4:+8646750 MS.gene51552:CDS
TTATTTCAAGGAACTGAGGA+GGG 0.603288 1.4:+8649400 MS.gene51552:CDS
AGATCATTGTGAGAAGGTGT+TGG 0.604039 1.4:+8646756 MS.gene51552:CDS
GAGCTGGAGGAGCAGTTGGA+CGG 0.604604 1.4:-8644565 None:intergenic
TGAATTATTTCAAGGAACTG+AGG 0.605246 1.4:+8649396 MS.gene51552:CDS
GAGAATGTGGATCCAGGGGT+AGG 0.610398 1.4:+8644488 MS.gene51552:CDS
AGCACAAAGATCAGAAAACC+GGG 0.611413 1.4:+8646810 MS.gene51552:CDS
GTATGGATGTGATGCCAACA+GGG 0.612420 1.4:-8651790 None:intergenic
ACTTTACATATATGGCAATG+TGG 0.612571 1.4:+8644595 MS.gene51552:CDS
TTAATGACTCAGGAAAAGAC+CGG 0.613019 1.4:+8644466 MS.gene51552:intron
GTTGAGAATGCGTGATGGAT+CGG 0.613329 1.4:-8643095 None:intergenic
TAAAGTCCTTTGGGAGCTGG+AGG 0.619516 1.4:-8644578 None:intergenic
AGCACCAAAGGACTTGAATG+AGG 0.623626 1.4:+8646481 MS.gene51552:CDS
ATTATTTCAAGGAACTGAGG+AGG 0.624203 1.4:+8649399 MS.gene51552:CDS
ACTGCTCCTCCAGCTCCCAA+AGG 0.628639 1.4:+8644572 MS.gene51552:CDS
TGAAGGGAAAACAATGCTGA+TGG 0.640075 1.4:+8645363 MS.gene51552:intron
TTTGAAACAGAGGCTGAAGG+CGG 0.640142 1.4:+8651716 MS.gene51552:CDS
ACCGGAGAATGTGGATCCAG+GGG 0.642420 1.4:+8644484 MS.gene51552:CDS
ATCTTTGTGCTATAAAACGA+CGG 0.647255 1.4:-8646798 None:intergenic
ATAGATAGTCAAATGTAAAG+CGG 0.650519 1.4:-8648287 None:intergenic
TGAGGTTCCTGAAAGCTGCG+AGG 0.652315 1.4:+8648257 MS.gene51552:CDS
TTGACACTAAAGCTAAGGAG+TGG 0.655831 1.4:+8645733 MS.gene51552:CDS
GCGGCGAAGGATTCTTATGG+AGG 0.663064 1.4:+8644126 MS.gene51552:CDS
TCGGTGCAGTAAGAACGAAA+CGG 0.666018 1.4:-8643076 None:intergenic
GAGTAGTGGAACTATTATTG+TGG 0.667886 1.4:+8646445 MS.gene51552:CDS
AAGAACGAAACGGAATTACG+CGG 0.672121 1.4:-8643066 None:intergenic
AGAACGAAACGGAATTACGC+GGG 0.675655 1.4:-8643065 None:intergenic
TTATGGTTGAGAATGCGTGA+TGG 0.680934 1.4:-8643100 None:intergenic
AGAAGAGGGATGAACCTGGA+CGG 0.682270 1.4:-8643123 None:intergenic
AAGAAGGTATCACTTTCATG+AGG 0.691776 1.4:+8645426 MS.gene51552:CDS
TGAGAAGCAGCAGAATGACA+AGG 0.697083 1.4:+8644153 MS.gene51552:CDS
TGTCTTAGCAGAAGGCAACG+TGG 0.706451 1.4:+8651754 MS.gene51552:CDS
TACAGACAGTACTTGCAGTG+AGG 0.707515 1.4:-8651948 None:intergenic
TATGGATGTGATGCCAACAG+GGG 0.737847 1.4:-8651789 None:intergenic
TGCCTTCTGCTAAGACATCG+CGG 0.763605 1.4:-8651748 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr1.4 gene 8642986 8651984 8642986 ID=MS.gene51552
chr1.4 mRNA 8642986 8651984 8642986 ID=MS.gene51552.t1;Parent=MS.gene51552
chr1.4 exon 8642986 8643130 8642986 ID=MS.gene51552.t1.exon1;Parent=MS.gene51552.t1
chr1.4 CDS 8642986 8643130 8642986 ID=cds.MS.gene51552.t1;Parent=MS.gene51552.t1
chr1.4 exon 8643854 8643990 8643854 ID=MS.gene51552.t1.exon2;Parent=MS.gene51552.t1
chr1.4 CDS 8643854 8643990 8643854 ID=cds.MS.gene51552.t1;Parent=MS.gene51552.t1
chr1.4 exon 8644088 8644227 8644088 ID=MS.gene51552.t1.exon3;Parent=MS.gene51552.t1
chr1.4 CDS 8644088 8644227 8644088 ID=cds.MS.gene51552.t1;Parent=MS.gene51552.t1
chr1.4 exon 8644478 8644623 8644478 ID=MS.gene51552.t1.exon4;Parent=MS.gene51552.t1
chr1.4 CDS 8644478 8644623 8644478 ID=cds.MS.gene51552.t1;Parent=MS.gene51552.t1
chr1.4 exon 8645368 8645447 8645368 ID=MS.gene51552.t1.exon5;Parent=MS.gene51552.t1
chr1.4 CDS 8645368 8645447 8645368 ID=cds.MS.gene51552.t1;Parent=MS.gene51552.t1
chr1.4 exon 8645630 8645887 8645630 ID=MS.gene51552.t1.exon6;Parent=MS.gene51552.t1
chr1.4 CDS 8645630 8645887 8645630 ID=cds.MS.gene51552.t1;Parent=MS.gene51552.t1
chr1.4 exon 8646392 8646502 8646392 ID=MS.gene51552.t1.exon7;Parent=MS.gene51552.t1
chr1.4 CDS 8646392 8646502 8646392 ID=cds.MS.gene51552.t1;Parent=MS.gene51552.t1
chr1.4 exon 8646709 8646831 8646709 ID=MS.gene51552.t1.exon8;Parent=MS.gene51552.t1
chr1.4 CDS 8646709 8646831 8646709 ID=cds.MS.gene51552.t1;Parent=MS.gene51552.t1
chr1.4 exon 8648048 8648169 8648048 ID=MS.gene51552.t1.exon9;Parent=MS.gene51552.t1
chr1.4 CDS 8648048 8648169 8648048 ID=cds.MS.gene51552.t1;Parent=MS.gene51552.t1
chr1.4 exon 8648251 8648320 8648251 ID=MS.gene51552.t1.exon10;Parent=MS.gene51552.t1
chr1.4 CDS 8648251 8648320 8648251 ID=cds.MS.gene51552.t1;Parent=MS.gene51552.t1
chr1.4 exon 8648985 8649077 8648985 ID=MS.gene51552.t1.exon11;Parent=MS.gene51552.t1
chr1.4 CDS 8648985 8649077 8648985 ID=cds.MS.gene51552.t1;Parent=MS.gene51552.t1
chr1.4 exon 8649316 8649443 8649316 ID=MS.gene51552.t1.exon12;Parent=MS.gene51552.t1
chr1.4 CDS 8649316 8649443 8649316 ID=cds.MS.gene51552.t1;Parent=MS.gene51552.t1
chr1.4 exon 8651709 8651850 8651709 ID=MS.gene51552.t1.exon13;Parent=MS.gene51552.t1
chr1.4 CDS 8651709 8651850 8651709 ID=cds.MS.gene51552.t1;Parent=MS.gene51552.t1
chr1.4 exon 8651937 8651984 8651937 ID=MS.gene51552.t1.exon14;Parent=MS.gene51552.t1
chr1.4 CDS 8651937 8651984 8651937 ID=cds.MS.gene51552.t1;Parent=MS.gene51552.t1
Gene Sequence

>MS.gene51552

ATGAGAAGAAGAATCTGGAATCTTCTCTGCAACAAAAACAAACTCATCCAATTCACATTTCCAATCTCAACCTCCAACTCCCGCGTAATTCCGTTTCGTTCTTACTGCACCGATCCATCACGCATTCTCAACCATAACCGTCCAGGTTCATCCCTCTTCTCTTTCTCCTTCAATTCAACATTAAAAATTTCTCCAAATTGAATTTTACTCTATTCAATCACCTCTCAAAATCATATTTACTGTGAAATCATATTTTGATAACACAGTAAATTAGATTGTTAACGCAATATGTAGCTAATACAATTCAGTTGATGGTTAATGAATATAATCTGCAACACCGACACTTCTGATGATCGAATACATGTCTGGTGTCCAACTCTGCACAGACACATGTGATTACGTTCAATTAAGTCATTTTCTTAAATTATTACTGGAGCTGACGTGTCAGTGCCGTGTTGGTGTCCGCCAATGTGTCAGCTCTTCATAGTGAAGATATAACTATGTGTCCTGGTTCATAAATCATCCACTAAACACAATTAACAATGATTTTGAATTGAACGTCATTTGTGGTTAATGAATATTGTGTAGATTTGAGCACTTGGGAATCATGTTTATTTAAACATTATTCGGATGATTGATAGATATATGTGTATATTTGAACACTTGAAAATCGTGGTTAATCACATTCAAAATCGTGGTTAGTAGTGTTTTGAGTTAATGATTAATGAGTTGCAACACCTTTTTATATTCATTCACTATCTACTGAACGTAATAATTAAACATATATTTGAATTGAGTTACCTATCTAATTTGGTGTCGAAATTTGATGTCTGATTTTTGTGTCAAAATAACACCACTTGATTTTCAGGACCGCTTGTGCAGTACAAAAATCTTGTTGAACAAGGGAAGTTTCAACACGATCCTTACCAAGAAACTGTTGCTACAGAGCTTCAGAATTTGTTATCAAGGTTGGAGAATTATGAGAGAGAAATGGAAGAGTATCATGTAAAAATTTAATCAGAGATGTTTAAATAATGAATATGATTTCTTCATTGTTTAAGGCATTTTCGATTGTGTTTGAATTTTTTCTTGTACTTGTTAGGTTAATCTATCTAATTGGGAGAAAAATAGGGAGAATGAGCGGCGAAGGATTCTTATGGAGGAAGTTGAGAAGCAGCAGAATGACAAGGATTGGTGGAAGCGCTTGAATAATAAAATCACTGAAAGATGGACAAACTCTAGGTAAATTTTGACTCAATTTTAAGTGATTTTGATTCAATTAGATGCTTCAACTTGTATATTTTGAATCAATTTTAGGTGATTTTGATTCAAATAGATGCGTAAACTTGTATGTTTTTGCGAGATTTTTTTTTAGTAAAAATAGTGTTTTTGGAATTCAGCTTGTGTTTCGTTGTTGCGAATTTTGTTTTATTTAGGTACATTGTATAAAAGCTACATGTGCTGTGTATTTATTTGTTTGTTAATGACTCAGGAAAAGACCGGAGAATGTGGATCCAGGGGTAGGAAAATGGGTCTCTTATCTTAAACGTGAGAAGAAGTTGGATTCAGTAGTTGGTCGCCGTCCAACTGCTCCTCCAGCTCCCAAAGGACTTTACATATATGGCAATGTGGGCAGTGGTATTTACCTTCTTATATTTGTCTTTTGGGTAAATTATCTTTTCCATTCCATCCTCAAGATGGTTAAATTTACATTGTGCTTTCCTCTGATTTTAAAAATCACAATCCCCTCCCTTAGAAGATGAATGAGTTACTCTTCAATCCATTATGTAAACATGTTTTTTAGGGATTTTTTTACGTATGCTAGTCTCAACGTTATTGACTTCTTATTTTGAACCTCTATTATCAACTGAGACTAAAGAAAATGGAATGAAATGAATGCTTCGGATGAAGTCGCAAAGCTAATAGTAGGAGTCTTTAAAACTTCATTTCACCTCGTTAAGTTATAAAATCAATAAGACATTCAATGTAATTGTTAATGAAAATTGTAAACAAGGAAAAAATTCAGCGGGAGTTTATTTATATGCTCATCGGTTACAACAACTAAATATGATACATTTTATCTCTTGGGGAAGAGAAGTGTAATTTTTATAATCAGAGGGGAGACATAATGTAGTTAAAGCAGCTTTCAAGGTAGAGGAGTGTAATTTACTTTTTTTTAATTTGGCTGATTTTTGTGGTTAGCAGTAATGCTAACTTACAATGGCCCGATTCAATTTCTAATTATGGTATTGCTTAAAGTTTCTGGTTACTTCATTTATGTCACTTGTCAAAGTCGATGTTATGTATTACCCCGATTCTCTTTTTAGCCTTATTTTTCCAGTTTCTTTTCTAATTATTTTGCTCGCGTTTTGAATGCTGAAGGGAAAACAATGCTGATGGACATGTTTTATAGTGCTACTGAAGGAATAGTTAAACATCGAAGAAGGTATCACTTTCATGAGGTGAGTGTTTTAATGTGTTTGTGGGCTTAACCTGAATATTTATTTATGGTCTTAATGACATAGATGTCATCAATATTATTTTCTGGAATAAATGTAACATCTTCCTATAGCAAGACCATTAATCATTGTTGTGAACATATTACTGAAAGCGATAGACTTATACCTTTTCCTTTCTTGTGCAGGCCATGCTGAGAATAAATGAACATATGCACAAGACATGGAAGAAACAAATGGAAGAGAAGCCTTTGCAGTCAGGCATTGCAAGTTGGATTATGAATCTTCCATTTGACACTAAAGCTAAGGAGTGGTTAGCTGCAGAAGAAAGATACAAGAAAGAGGTGCAGATGAAACACATTCTTCCAGATGTAGCAGATAAGTTTTTTCTGGATCAAGAAGGAGAAGAAAAGGGAGCTAGCATTTTGTGCTTTGATGAGATACAGGTAAAGGAAAATTATTACGCTGTGTTATAATGTGTTCCTCATATTTGTATCCTAAAGTAAAAGTATAGATTTCCATATCCATATCCGTCAATTCTGATTTAACACTTGAGGAATATTTTCTTATTGAGTTTTTTGTTTTCGGTGACTAATGGGCACATCCATCCCTCTTGGAGCAGTTTTTCATGATTCATTTGAAAGGATTTTAGGGAAGTGTGCATTTTGAGTCACTTCCCTTGTCTACTTTAGTATGTGTTATTTTGTCAAGATTTTCGTTACAAATATTTTCCCCACCCATATCTTCTGTTCCAGATCATACTATCTGGTGGAAACTCAATGTTAGGCTTTGAACACTTCTGTTGTAAGTTTGAGTTGCTTTGGTTTTTTTCCCCTCCTTGGCTTATTCTTAACATGATTGCTGAGCTCTCTCTGTATCATATCATTTTTTCTTTCATACTTTGGCTTGTAAGGAAGATAATGACTTAATTTTTATGCTCTTTATTTCAGACTGTTGATGTATTTGCTATTGTGGCTTTATCTGGAATTCTAAGCAGATTGCTGAGTAGTGGAACTATTATTGTGGCTACAAGTAATCGAGCACCAAAGGACTTGAATGAGGTGTGTTCTTTATTATTCAATCTTTTCACTTGATGTGTTGTCTTTTTCCTTTGTTACTCAATTATGTTGCAGGGGGCTTATAAACACACCGAAGACATCCCTGAAGATTTTTTTTTTTTTTTTGGAAGATCTTGATTGTAGACCAATTGGAAAAGGGCCTCATATTTGTTTATTGATATTTTCTTCAAAAATGTTTTTTTGTGCAGGCTGGTATGGTACCAGAATTCTTCCAAAACCTTCTTTCTAATTTGGAAGATCATTGTGAGAAGGTGTTGGTAGGCAGTGAAATTGACTACCGTCGTTTTATAGCACAAAGATCAGAAAACCGGGTGAGAATTAATCTGTCACTTTCATCACCTTTATGTAAACATGTGATGTCAGTATACTTCTCAGTGGTAGAATTTTATTATCAGCCATAGTAGCAGTGGAATTATATCCACCAATTATTTGATCTATTTTTCCTCAAATAGCTGTTTAAGATATGCATCTCTAGCAACTGCATTTGCAGTTTTGCTTGGTCATTGATTTCTTACACACGCAAATGTGATGTCAGTATATTTCATAGCAGTAGAGTAATTTTTTAGTTTGATCAGCCATATTAATAGATAAATACCCAATAATAATTTGAATATATTTTCCTAACCCAATTTTTTTTATTATATGCATCTCTAGGAATTGTATTTGCACTATATTGTGGCCATTGATTTCTTATATACATCATTTACCATACACAGTTACTGAAGTTATTAAAATAAAATGTAAAAGTTGATAGTTTGGTTTTGAATACAATAGAGGGAATAATCAATAGCTTAGGTTGTTTGCTCTCGGCTTTGTATTACCTACAAAGGGAAAAGCGAAATCTTCATTTCTGATGGTGAAAATGTGTGCATTGGCAACTTCGGGACACGTGGAATGATCTAATATTGTTAATGGTCCATCAATGAATGTCATTGTGTATATACCCTAATTGATGTAGCCCATTCCATATTGACTTTGATATTGGTTGTGTTTGGTTTTCTTAAGGTGTGTAAACGTTGGCATGATAGTTGATTAACCATAAATAAACAGTTGTGGCTCTTTAGTTAGGTACTTGTACATCAATACAAAAAAAAAGTATCTTAGTAGTTACTTTGCATCATCGGTTCAGTAAAACAAAACATTGCATATAACTTTATCCAAATTATGAAATGCCAATTCAATGTAAATGTGGCTTCTTTGTCAATTACAAAGTATTATGATGCCAACCTTACAAATATTGTACAGCCAAAATCCTTCTACTCAACAATATAATCATAGGATGGAAACTGGAAAGTCCCCAAATGAGGACACTTCCATGTTTGACATCATTGAAAGAAACTTTTTTCTATTATACACTACTTTGGTTTTGAACAGTATTTAGTCATGATACTTGTGCGAAAAGTCAACTGCACTTTTCTATCCATGCACAGCGTATTCTGATAGTTGCATGTCAACAACACATCCTATTATGCCTACTAGAACTCAAGTCTCAAACGTATGGGAATTTAAGTTGATATAGATATGCAGGTAAACTATTTATGCCCTATTGAAAGGGAAACCATCAATGAATTTGAGAAAAAATGGCAGGATGCAACAGGCAGATTTGGAGGAAAAATAATCTCCAACACCATTTCAGTGATGTTCGGAAGGTATTAGGTTTCCTATTTATATTTAATGCTGTCAAACAAGGATGCATAATATAAATGAATCATATAAGTTTTTTGTGACAGGACTCTTGAGGTTCCTGAAAGCTGCGAGGGAGTTGCCCGCTTTACATTTGACTATCTATGTGGTCGTCCGGTATGTTCTTTCTCTTTGTTTGGTTTCTGTATAAATTATTGTTTCCTAGCAAATATAGTTACCAGCATATTGTTTGGCCACGAGGAAATGGAAGGGAGGGAATTAAAAGAGGCAAAATTCCTCCTCAGTCCATTTTTATTCCCCCCTGTCATTGGGCGATTTGGAGGGGACAGAAGATGGGTTTAAGATATTTGTAATATGTTGACTAAAATATCCTTATATAAACTTTGTTCTTCTCATCAACCATACACAGACATGCTATCCATTCTTTCTAGTCACTGCCGCCACTGTCCGACGAAGGATCTGTCTCCACTTTCTCTTCTCCTTCTTTTGTATAAACCCCATAACTTAGTTGGAAACAAATTGAGTTCTAAGTTTGAATTTGATAATTTTTTGCCAGTGGTACTAAACTAGGACTGGTACTCGAGTCGGTCAGGGTACTGGATTAATGGGTCACTAGTCAAACCAATGGGTTACTCGTTGAGCCACAAAAGTATATGTATTTTATTTGCAAATATTATATTAAAAATATCCTATACATAACTTATTTATCATGACAACAATAGACTCATGCCTTAGTGTGGTGGTAAAAATAGCTAAAGCTAATATTTTGGGATACCTGGAAGTAAGATCTCTCCCTCGCTCTAACTGTTTCGATTTTCAGTTGGGTGCAGCAGATTATATTGCAGTAGCTGAAAACTATCACACCGTTTTCATATCTGATATTCCAGTGATGAGCATGCGCATTCGTGACAAGGTATTAATTAAAACGGGTTGAGTTGGCCTCATGTGTTTATAATTGACTAATGTATTTTAAGAAGACATATTGTTGGTTAAAAGCTTGCTTTCTTGCTGTGTCTACATTTTCTAAGTTATTCTTCAAATGCAATGCTTGAAATTTTTATTCATCAGTTGTGACATTACAATTTGATACACTTCTCTTTCAAGACTTCCCTATCTTATTTTGAGCAAAAAAAACATTCTCTACTTTTCAGGCACGGAGATTTATCACTCTTATTGACGAATTATACAATCATCATTCTTGTCTATGTTGCTTGGCATCTTCTTCAATTGATGAATTATTTCAAGGAACTGAGGAGGGCACACTTTTTGACTTGGAGAGGTAATTTTGTCTGTTTGTATGTGATTTATGATGCATGGAAAGCTTTTGGATTTCAAAGTATAAATGCTTTGGATCTGCTGTAGTGGTGTGATAATTCTGTTTGCCTTTTTTATCACTTCACTGTCAATATATTATCCAGTGGTTGATTCTGATGCTTGTTATGCCTTGTAGCTGGGAATAGGTAGTTTCAAATTGGAAACATTTATATTAAATTCCTAATTCTAGATTGTTTGTTGATGTTGTTGCTTGGCTAACTCATTTTCAAAGTAATTATTGTAAAAACTTACCATGGATATTTATTTCCTCAACCAACCATGTTAGGCCTAGATAGACAAAGATAGGACTTGGAAGGTGAGTTACAAGAATATTTAGCAGTTAGAGATGTTTAGTTAGGGGACGATGTATAAAGAGATGATTCAGAAACATTGTTAGGAGAATGAGTCTTTGATAAGTTTAAAACAGAAACTTCATTAAACTTCACACAATGAGCACACAAACTCACAAATCTGGTAGGTGAACTTTCATTAAACTGCGCTCTATTTTGAGGCTGTAGAGTGTAGAATGAAGATTTTCCCTTTTATAGATGCTAAAAGTCCACTCGTGAAGATTTTCTCTTTTATAGATGCTATAAGTCCACTCATGAAATTCCCAAGACTTGTTGTTCAGGTAGTTTTAGTACTTGGAAGGAAATCAACTCAAAAAGCCTCTCTATATTCTTCTACTTTACCAATCTATCTTACACTGCTAATTATTCAAAGGGGTTTTCTTTTACTTGTCCCCCGTATCGATCTATTAGAGCCTTCGTCAACTTATCCCCAGTCAAGATCTCATTGACCTCTCAGAGAAGAATAAACTAGACAATTGTTCCTCCCTGCGTGCATAGAGACCGGGTCAAGTCTCACCTTGACTTTTTCAAATGTATTTGAACTTCAAAATAAATATCAGCCTTGGTGATCCATGCTGCAAGGTCTATTTTATCAAACATCGGTAACTCCACCTTTTCAATTGACATTTTCTACTCGTCCCAAGATTTACCTTGTGGTTTTGTTGACCCTGGTTGATAAAACCTATCAGCTAAAGATGAATCTCCAACTGAAGAGGTTTCAACTTTCAACCCTTTTTTGCTATCAGTTGTTGATCTCTGTCAAAACAGATCAATGGTGCTGCAATTCAGCCTTCATCCTCTGATTGTCCTTCATATAACCACACTGCATGCAAATATGCAATTAAATGATTGCTAAAGTTGTCCATATAACTACAGTATTATACAATTAAATAACTACTACAAAATCGTCCTACCATATAACCGCCATATTATTATTACTAAATACAGACCTGTTATTGTCTTATTTCTCACAGTGTATCTGAGCCATAGTTTAGGCTTTGTTAATAGCATGATCCACAAGCTGGCTCGTATTCTTCAGTTCTCAATTCCTGTCTCTCTTCTACATTATATTTCTATTGCATTTTTGCTTCCTCCAGGGATTCTCTAAACTCTAGATCCCTTACAGACCATGACAGTTATTTATTAGAGTCACTGTAATCCTGCAACAAATTTATATCTGATCAAAGTACCAAACAAGAAACCAAACATTACTTTTCCCATTATATAGCATAAAATATAAGGGGGAGCCTTGGCGCAACGGTAAAGTTGTTGTCACATAACTGAAAGGTCACGGGTTCAAGTCCTGGAAATAGCCTCTTGTGTAAAAAACAGGTTAAGGCTGCGTACAATACACCAAAATGGTGGGACCCCTTTCTGTACCCTGCGTATGCGGGAGCTTTAGTGCACCGGGCTCCCCTTTTTTTTATAGCATAAAAAAATTTACTTGGCAAGAAGGGAGGGTTTTTGCTCAAAATGCACCATAGATCTATGTTAAGTTACTTCCTTTTTTTGGTGAAGTTAGGTTGCGTAGAGCCCAAGATGATTGTAAAAGTGGTTTTACTGATTGAGTTGAGAAGTTGGAGACCATATCCTTGATTTAAAAGGTAAACTTCCAATGTGTTTCCAAACATGGCATAGAATGTAAGCAGACTTAAAAATAAGGAAATAGTTATAAACTAGATTTTTCTTGATAATATGTGGTTATAATTAGTAGTTTTCATAGGTTCTGTTCTTTGGGCCAACATTCTTTTTATCGTAAGTTTCTCTTAATGATGTATTAACAGCCACTGACTGACAGATTTGCTTTTGATTGAAATTTAGCGCTCTTAATTATATGATGCATTGGTAACTGAGCCTCCTCACTCTTGTTTCGGTTCCAGTTTCCAGTTTGAAACAGAGGCTGAAGGCGGGAAACTTCGCCGCGATGTCTTAGCAGAAGGCAACGTGGGCTCAGGAGGTACCCCTGTTGGCATCACATCCATACTATCTGGTCAGGAAGAGCTGTTTACTTTTCAGAGAGCTGTAAGTAGTTACCATTCCTGAATTTTAGTCGTGCAACAATAGTTACAAAACCATTTATAACATTATGCTGAAATGGATCCCTGTAGTATCTCTTTTTCCTCACTGCAAGTACTGTCTGTAGTTGCATTTCATAA

Protein sequence

>MS.gene51552.t1

MRRRIWNLLCNKNKLIQFTFPISTSNSRVIPFRSYCTDPSRILNHNRPGPLVQYKNLVEQGKFQHDPYQETVATELQNLLSRLENYEREMEEYHVNLSNWEKNRENERRRILMEEVEKQQNDKDWWKRLNNKITERWTNSRKRPENVDPGVGKWVSYLKREKKLDSVVGRRPTAPPAPKGLYIYGNVGSGKTMLMDMFYSATEGIVKHRRRYHFHEAMLRINEHMHKTWKKQMEEKPLQSGIASWIMNLPFDTKAKEWLAAEERYKKEVQMKHILPDVADKFFLDQEGEEKGASILCFDEIQTVDVFAIVALSGILSRLLSSGTIIVATSNRAPKDLNEAGMVPEFFQNLLSNLEDHCEKVLVGSEIDYRRFIAQRSENRVNYLCPIERETINEFEKKWQDATGRFGGKIISNTISVMFGRTLEVPESCEGVARFTFDYLCGRPLGAADYIAVAENYHTVFISDIPVMSMRIRDKARRFITLIDELYNHHSCLCCLASSSIDELFQGTEEGTLFDLESFQFETEAEGGKLRRDVLAEGNVGSGGTPVGITSILSGQEELFTFQRAYLFFLTASTVCSCIS