Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54884.t1 | XP_024638161.1 | 97.3 | 372 | 10 | 0 | 1 | 372 | 1 | 372 | 1.70E-206 | 728.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54884.t1 | Q9LDC0 | 68.6 | 373 | 107 | 4 | 1 | 371 | 1 | 365 | 7.2e-142 | 505.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54884.t1 | G7JTJ9 | 97.3 | 372 | 10 | 0 | 1 | 372 | 1 | 372 | 1.2e-206 | 728.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049567 | MS.gene54884 | 0.81544 | 9.23E-52 | -1.69E-46 |
| MS.gene049825 | MS.gene54884 | 0.812869 | 3.41E-51 | -1.69E-46 |
| MS.gene050201 | MS.gene54884 | 0.810293 | 1.24E-50 | -1.69E-46 |
| MS.gene050227 | MS.gene54884 | 0.809839 | 1.55E-50 | -1.69E-46 |
| MS.gene050228 | MS.gene54884 | 0.81127 | 7.61E-51 | -1.69E-46 |
| MS.gene050719 | MS.gene54884 | 0.834808 | 2.42E-56 | -1.69E-46 |
| MS.gene050721 | MS.gene54884 | 0.832448 | 9.40E-56 | -1.69E-46 |
| MS.gene050724 | MS.gene54884 | 0.800869 | 1.18E-48 | -1.69E-46 |
| MS.gene050780 | MS.gene54884 | 0.820414 | 6.94E-53 | -1.69E-46 |
| MS.gene051207 | MS.gene54884 | 0.809038 | 2.31E-50 | -1.69E-46 |
| MS.gene051744 | MS.gene54884 | 0.822189 | 2.71E-53 | -1.69E-46 |
| MS.gene052176 | MS.gene54884 | 0.834438 | 3.00E-56 | -1.69E-46 |
| MS.gene052358 | MS.gene54884 | -0.828064 | 1.11E-54 | -1.69E-46 |
| MS.gene052376 | MS.gene54884 | 0.807179 | 5.74E-50 | -1.69E-46 |
| MS.gene053294 | MS.gene54884 | 0.806269 | 8.93E-50 | -1.69E-46 |
| MS.gene054468 | MS.gene54884 | 0.814873 | 1.23E-51 | -1.69E-46 |
| MS.gene054576 | MS.gene54884 | 0.819007 | 1.46E-52 | -1.69E-46 |
| MS.gene055586 | MS.gene54884 | 0.805503 | 1.29E-49 | -1.69E-46 |
| MS.gene055808 | MS.gene54884 | 0.801409 | 9.13E-49 | -1.69E-46 |
| MS.gene056091 | MS.gene54884 | 0.826503 | 2.62E-54 | -1.69E-46 |
| MS.gene056506 | MS.gene54884 | 0.805818 | 1.11E-49 | -1.69E-46 |
| MS.gene056638 | MS.gene54884 | 0.811694 | 6.16E-51 | -1.69E-46 |
| MS.gene057026 | MS.gene54884 | 0.838531 | 2.72E-57 | -1.69E-46 |
| MS.gene05795 | MS.gene54884 | 0.803625 | 3.19E-49 | -1.69E-46 |
| MS.gene058037 | MS.gene54884 | 0.802701 | 4.95E-49 | -1.69E-46 |
| MS.gene058635 | MS.gene54884 | 0.82295 | 1.80E-53 | -1.69E-46 |
| MS.gene058911 | MS.gene54884 | 0.801652 | 8.14E-49 | -1.69E-46 |
| MS.gene05954 | MS.gene54884 | 0.83449 | 2.91E-56 | -1.69E-46 |
| MS.gene060572 | MS.gene54884 | 0.827776 | 1.30E-54 | -1.69E-46 |
| MS.gene060586 | MS.gene54884 | 0.812226 | 4.72E-51 | -1.69E-46 |
| MS.gene060879 | MS.gene54884 | 0.805007 | 1.64E-49 | -1.69E-46 |
| MS.gene061040 | MS.gene54884 | -0.823632 | 1.25E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54884.t1 | MTR_4g039430 | 97.312 | 372 | 10 | 0 | 1 | 372 | 1 | 372 | 0.0 | 758 |
| MS.gene54884.t1 | MTR_8g080980 | 33.692 | 279 | 177 | 5 | 55 | 331 | 271 | 543 | 1.33e-33 | 131 |
| MS.gene54884.t1 | MTR_7g053470 | 32.384 | 281 | 184 | 3 | 55 | 334 | 267 | 542 | 2.94e-33 | 130 |
| MS.gene54884.t1 | MTR_8g012340 | 36.726 | 226 | 137 | 4 | 107 | 331 | 327 | 547 | 3.09e-31 | 124 |
| MS.gene54884.t1 | MTR_1g017870 | 30.195 | 308 | 196 | 9 | 37 | 338 | 44 | 338 | 1.73e-28 | 114 |
| MS.gene54884.t1 | MTR_1g017870 | 31.228 | 285 | 180 | 8 | 56 | 334 | 60 | 334 | 2.66e-28 | 114 |
| MS.gene54884.t1 | MTR_1g017870 | 30.195 | 308 | 196 | 9 | 37 | 338 | 128 | 422 | 1.07e-27 | 113 |
| MS.gene54884.t1 | MTR_1g017870 | 30.592 | 304 | 192 | 9 | 37 | 334 | 128 | 418 | 1.21e-27 | 113 |
| MS.gene54884.t1 | MTR_1g017870 | 31.228 | 285 | 180 | 8 | 56 | 334 | 270 | 544 | 1.58e-27 | 114 |
| MS.gene54884.t1 | MTR_1g017870 | 31.228 | 285 | 180 | 8 | 56 | 334 | 270 | 544 | 1.76e-27 | 114 |
| MS.gene54884.t1 | MTR_1g017870 | 31.228 | 285 | 180 | 8 | 56 | 334 | 246 | 520 | 2.00e-27 | 113 |
| MS.gene54884.t1 | MTR_4g055500 | 29.118 | 340 | 198 | 14 | 22 | 335 | 230 | 552 | 8.55e-21 | 94.4 |
| MS.gene54884.t1 | MTR_8g010620 | 32.215 | 149 | 94 | 4 | 107 | 254 | 130 | 272 | 7.88e-14 | 72.0 |
| MS.gene54884.t1 | MTR_8g010620 | 28.358 | 201 | 134 | 6 | 58 | 254 | 145 | 339 | 1.26e-13 | 72.0 |
| MS.gene54884.t1 | MTR_8g010620 | 28.358 | 201 | 134 | 6 | 58 | 254 | 181 | 375 | 1.83e-13 | 71.6 |
| MS.gene54884.t1 | MTR_8g010620 | 28.358 | 201 | 134 | 6 | 58 | 254 | 206 | 400 | 2.15e-13 | 71.6 |
| MS.gene54884.t1 | MTR_8g011560 | 31.544 | 149 | 95 | 4 | 107 | 254 | 62 | 204 | 7.58e-13 | 68.2 |
| MS.gene54884.t1 | MTR_7g059150 | 30.303 | 132 | 82 | 1 | 181 | 312 | 92 | 213 | 1.61e-11 | 64.7 |
| MS.gene54884.t1 | MTR_8g011100 | 30.872 | 149 | 96 | 3 | 107 | 254 | 244 | 386 | 3.11e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54884.t1 | AT3G21640 | 68.633 | 373 | 107 | 4 | 1 | 371 | 1 | 365 | 0.0 | 527 |
| MS.gene54884.t1 | AT5G48570 | 33.446 | 296 | 182 | 8 | 49 | 337 | 274 | 561 | 1.50e-31 | 125 |
| MS.gene54884.t1 | AT3G25230 | 31.615 | 291 | 168 | 7 | 55 | 331 | 272 | 545 | 8.50e-30 | 120 |
| MS.gene54884.t1 | AT3G25230 | 31.615 | 291 | 168 | 7 | 55 | 331 | 272 | 545 | 1.08e-29 | 120 |
| MS.gene54884.t1 | AT3G54010 | 30.094 | 319 | 177 | 13 | 45 | 335 | 160 | 460 | 1.61e-21 | 96.3 |
| MS.gene54884.t1 | AT3G54010 | 30.094 | 319 | 177 | 13 | 45 | 335 | 250 | 550 | 1.66e-21 | 96.7 |
| MS.gene54884.t1 | AT1G58450 | 32.716 | 162 | 98 | 5 | 175 | 332 | 1 | 155 | 1.16e-12 | 65.9 |
Find 92 sgRNAs with CRISPR-Local
Find 260 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGATGGAAATGTTCTGTTTC+AGG | 0.222182 | 4.4:-65614650 | MS.gene54884:CDS |
| GAGATCTATAAAGGAATATT+TGG | 0.225703 | 4.4:-65612884 | MS.gene54884:CDS |
| GCAATTTGAAGGCTTTATTT+AGG | 0.233759 | 4.4:-65613057 | MS.gene54884:CDS |
| TCAACTTCAGAATCAACTTT+TGG | 0.240967 | 4.4:+65616607 | None:intergenic |
| TGTGGTACTGGTTCAGGTCT+TGG | 0.262790 | 4.4:+65612860 | None:intergenic |
| CTTGCAATTGCTTTATCTTC+AGG | 0.277406 | 4.4:+65612959 | None:intergenic |
| GACTTCATGTTCCAGTTGTT+TGG | 0.278250 | 4.4:-65614447 | MS.gene54884:CDS |
| TCTGCCATTGGTGGAACATT+TGG | 0.294220 | 4.4:+65614850 | None:intergenic |
| GGTTACAAAACAAATTATTA+AGG | 0.302747 | 4.4:-65616569 | MS.gene54884:CDS |
| TTATGGTGGTAGTCCATTAC+AGG | 0.321001 | 4.4:-65615859 | MS.gene54884:intron |
| CCAGTTGTTTGGGAAGTATA+GGG | 0.330723 | 4.4:-65614436 | MS.gene54884:CDS |
| AAATGACTGGCTTGGGCATT+GGG | 0.332295 | 4.4:-65614957 | MS.gene54884:CDS |
| CTGCGTGTGAGCTGGGAATT+AGG | 0.336747 | 4.4:-65614901 | MS.gene54884:CDS |
| CGACCAATTGAGATGGTAAT+AGG | 0.338090 | 4.4:-65615785 | MS.gene54884:CDS |
| GTTTGGGAAGTATAGGGATA+TGG | 0.339954 | 4.4:-65614430 | MS.gene54884:CDS |
| ACTTCATGTTCCAGTTGTTT+GGG | 0.360386 | 4.4:-65614446 | MS.gene54884:CDS |
| CCCTATACTTCCCAAACAAC+TGG | 0.377001 | 4.4:+65614436 | None:intergenic |
| GGAATTGGTTCATATTTGTT+TGG | 0.380589 | 4.4:-65612832 | MS.gene54884:CDS |
| GTTTATGAAGTTGAGCTCAT+TGG | 0.387560 | 4.4:-65614823 | MS.gene54884:CDS |
| GGACTACTCAATAATTCTTC+AGG | 0.387637 | 4.4:+65616631 | None:intergenic |
| AAGCAGAAGGAGATCTATAA+AGG | 0.387775 | 4.4:-65612893 | MS.gene54884:CDS |
| TCCAGTTGTTTGGGAAGTAT+AGG | 0.389067 | 4.4:-65614437 | MS.gene54884:CDS |
| GAGCGTTGCTGCGTGTGAGC+TGG | 0.407608 | 4.4:-65614909 | MS.gene54884:CDS |
| GTGAGCTGGGAATTAGGATA+TGG | 0.419661 | 4.4:-65614895 | MS.gene54884:CDS |
| TTTCCTATTACCATCTCAAT+TGG | 0.421411 | 4.4:+65615782 | None:intergenic |
| CATATTTGTTTGGCAGTGGT+TGG | 0.426113 | 4.4:-65612822 | MS.gene54884:CDS |
| GAAATGACTGGCTTGGGCAT+TGG | 0.428307 | 4.4:-65614958 | MS.gene54884:CDS |
| TGACTGTAGAGGAACGGATT+GGG | 0.429854 | 4.4:-65614693 | MS.gene54884:CDS |
| ACAAAAGCATGTTGAATACT+TGG | 0.433435 | 4.4:+65616525 | None:intergenic |
| AAGAAAGAAATGACTGGCTT+GGG | 0.441743 | 4.4:-65614964 | MS.gene54884:CDS |
| GAAAGTACTGAATATGCAAA+AGG | 0.441865 | 4.4:-65616661 | MS.gene54884:CDS |
| ATGTCAGGCCATAGCTTACA+TGG | 0.460197 | 4.4:-65614475 | MS.gene54884:intron |
| GAAGAAAGAAATGACTGGCT+TGG | 0.461382 | 4.4:-65614965 | MS.gene54884:CDS |
| TCTCAGACCACGCCCTGTAA+TGG | 0.475502 | 4.4:+65615846 | None:intergenic |
| GGCCATGCAACAGTATGAAA+TGG | 0.476558 | 4.4:-65614611 | MS.gene54884:intron |
| AAAGTACTGAATATGCAAAA+GGG | 0.478686 | 4.4:-65616660 | MS.gene54884:CDS |
| CAGTACCACAGAAAAGGAAT+TGG | 0.480228 | 4.4:-65612847 | MS.gene54884:CDS |
| TTGGGCAGACAGATGTTGCC+AGG | 0.480432 | 4.4:-65613012 | MS.gene54884:CDS |
| GGGGTGGCAAGCATGAAAGC+TGG | 0.481889 | 4.4:-65614937 | MS.gene54884:CDS |
| GAAGTATAGGGATATGGCTC+TGG | 0.484336 | 4.4:-65614424 | MS.gene54884:CDS |
| ATTGAGATGGTAATAGGAAA+AGG | 0.485564 | 4.4:-65615779 | MS.gene54884:intron |
| GGCTTTATTTAGGAGAGGTA+AGG | 0.490198 | 4.4:-65613047 | MS.gene54884:CDS |
| GACAGGCCGCCGTGTTAAGA+TGG | 0.492108 | 4.4:+65614385 | None:intergenic |
| CTGAACCAGTACCACAGAAA+AGG | 0.492954 | 4.4:-65612853 | MS.gene54884:CDS |
| GGGTGGCAAGCATGAAAGCT+GGG | 0.494339 | 4.4:-65614936 | MS.gene54884:CDS |
| GGTTCATATTTGTTTGGCAG+TGG | 0.498991 | 4.4:-65612826 | MS.gene54884:CDS |
| TCATAAACTAAATCTGCCAT+TGG | 0.508037 | 4.4:+65614838 | None:intergenic |
| TGAGGATGAGAGCAATTTGA+AGG | 0.509951 | 4.4:-65613068 | MS.gene54884:CDS |
| ATGACTGTAGAGGAACGGAT+TGG | 0.522055 | 4.4:-65614694 | MS.gene54884:CDS |
| AACGGATTGGGGCAGCAGAT+CGG | 0.529421 | 4.4:-65614681 | MS.gene54884:CDS |
| TAAACTAAATCTGCCATTGG+TGG | 0.530780 | 4.4:+65614841 | None:intergenic |
| AGCGTTGCTGCGTGTGAGCT+GGG | 0.534499 | 4.4:-65614908 | MS.gene54884:CDS |
| GGTAAGGCTAGAGCAGCACT+TGG | 0.543948 | 4.4:-65613031 | MS.gene54884:CDS |
| AAGCATGTTGAATACTTGGA+AGG | 0.544025 | 4.4:+65616529 | None:intergenic |
| GTCATCTCCCATGTAAGCTA+TGG | 0.545323 | 4.4:+65614467 | None:intergenic |
| GGCAGCAGATCGGAGAAAGA+TGG | 0.546425 | 4.4:-65614671 | MS.gene54884:CDS |
| AGTTGAAGTTCTTCATGAGA+AGG | 0.548105 | 4.4:-65616590 | MS.gene54884:CDS |
| TGGTAGTCCATTACAGGGCG+TGG | 0.549466 | 4.4:-65615853 | MS.gene54884:intron |
| ACAAAACAAATTATTAAGGA+AGG | 0.552128 | 4.4:-65616565 | MS.gene54884:CDS |
| TAAATTTGAAGATACATGGC+AGG | 0.555459 | 4.4:-65615813 | MS.gene54884:CDS |
| GCGGTTCAGCTTAATCAGAC+AGG | 0.561365 | 4.4:+65614368 | None:intergenic |
| GAATTAGGATATGGAAAGGA+AGG | 0.562161 | 4.4:-65614886 | MS.gene54884:CDS |
| CAGGGCGTGGTCTGAGAACA+CGG | 0.563793 | 4.4:-65615840 | MS.gene54884:CDS |
| AACCGCTATGAAGAAGCTAT+AGG | 0.568196 | 4.4:-65614351 | MS.gene54884:CDS |
| GACTGGCTTGGGCATTGGGG+TGG | 0.573654 | 4.4:-65614953 | MS.gene54884:CDS |
| CAAATTATTAAGGAAGGTCA+TGG | 0.574339 | 4.4:-65616559 | MS.gene54884:CDS |
| AACCATTTCATACTGTTGCA+TGG | 0.576813 | 4.4:+65614609 | None:intergenic |
| ACAGAGAAGAAAGAAATGAC+TGG | 0.578132 | 4.4:-65614970 | MS.gene54884:intron |
| GACTGTAGAGGAACGGATTG+GGG | 0.579307 | 4.4:-65614692 | MS.gene54884:CDS |
| TTGAAGGCTTTATTTAGGAG+AGG | 0.585733 | 4.4:-65613052 | MS.gene54884:CDS |
| AGCATAAATTTGAAGATACA+TGG | 0.586003 | 4.4:-65615817 | MS.gene54884:CDS |
| CTGGGAATTAGGATATGGAA+AGG | 0.597900 | 4.4:-65614890 | MS.gene54884:CDS |
| GCAGATCGGAGAAAGATGGA+TGG | 0.599142 | 4.4:-65614667 | MS.gene54884:CDS |
| GCCGCCGTGTTAAGATGGCA+TGG | 0.599939 | 4.4:+65614390 | None:intergenic |
| GTTTCAGGAAAATAAACTAG+AGG | 0.610535 | 4.4:-65614635 | MS.gene54884:CDS |
| TCAGGAAAATAAACTAGAGG+AGG | 0.614029 | 4.4:-65614632 | MS.gene54884:CDS |
| AAGTACTGAATATGCAAAAG+GGG | 0.616531 | 4.4:-65616659 | MS.gene54884:CDS |
| AGCTATTTATCAAAAGCAGA+AGG | 0.618624 | 4.4:-65612906 | MS.gene54884:CDS |
| GTCCTATAGCTTCTTCATAG+CGG | 0.623004 | 4.4:+65614349 | None:intergenic |
| GTAAGGCTAGAGCAGCACTT+GGG | 0.626696 | 4.4:-65613030 | MS.gene54884:CDS |
| AAACTTGCAGGTATTAAGTG+AGG | 0.627657 | 4.4:-65613086 | MS.gene54884:intron |
| AATGACTGGCTTGGGCATTG+GGG | 0.631535 | 4.4:-65614956 | MS.gene54884:CDS |
| GTGATATGACTGTAGAGGAA+CGG | 0.631871 | 4.4:-65614699 | MS.gene54884:CDS |
| TATGGTGGTAGTCCATTACA+GGG | 0.637407 | 4.4:-65615858 | MS.gene54884:intron |
| TCGCAGTGATATGACTGTAG+AGG | 0.641089 | 4.4:-65614704 | MS.gene54884:CDS |
| TGGGCAGACAGATGTTGCCA+GGG | 0.643676 | 4.4:-65613011 | MS.gene54884:CDS |
| GAATCCATGCCATCTTAACA+CGG | 0.645723 | 4.4:-65614394 | MS.gene54884:CDS |
| GGAGCAACGACCAATTGAGA+TGG | 0.655756 | 4.4:-65615792 | MS.gene54884:CDS |
| GGTGGCAAGCATGAAAGCTG+GGG | 0.672895 | 4.4:-65614935 | MS.gene54884:CDS |
| TGTCAGGCCATAGCTTACAT+GGG | 0.675965 | 4.4:-65614474 | MS.gene54884:intron |
| TCTCAACCACAATCAAAACC+AGG | 0.685386 | 4.4:-65616929 | MS.gene54884:intron |
| TCCATGCCATCTTAACACGG+CGG | 0.771881 | 4.4:-65614391 | MS.gene54884:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CTATAATAAAATTATAATCA+TGG | - | chr4.4:65615881-65615900 | MS.gene54884:intron | 10.0% |
| !!! | TAAATTGTTATAGTATTTTC+TGG | - | chr4.4:65616532-65616551 | MS.gene54884:CDS | 15.0% |
| !!! | TGTATATTTATTTTAGTTCA+TGG | - | chr4.4:65614171-65614190 | MS.gene54884:intron | 15.0% |
| !! | AACAGTTTCAAAAACTAAAT+TGG | + | chr4.4:65613493-65613512 | None:intergenic | 20.0% |
| !! | ACAAAACAAATTATTAAGGA+AGG | - | chr4.4:65613142-65613161 | MS.gene54884:intron | 20.0% |
| !! | ACTAAAATAAATATACACTC+AGG | + | chr4.4:65614168-65614187 | None:intergenic | 20.0% |
| !! | CTAAAATAAATATACACTCA+GGG | + | chr4.4:65614167-65614186 | None:intergenic | 20.0% |
| !! | CTTGATAAAAGTTTATAAAG+AGG | - | chr4.4:65614337-65614356 | MS.gene54884:intron | 20.0% |
| !! | GGTTACAAAACAAATTATTA+AGG | - | chr4.4:65613138-65613157 | MS.gene54884:intron | 20.0% |
| !! | TAAAATAAATATACACTCAG+GGG | + | chr4.4:65614166-65614185 | None:intergenic | 20.0% |
| !! | TAACAATTTACAAGTATGTT+TGG | + | chr4.4:65616522-65616541 | None:intergenic | 20.0% |
| !! | TACTATGTAAATAAGCATTT+CGG | - | chr4.4:65615429-65615448 | MS.gene54884:intron | 20.0% |
| !! | TTATAAACTGGTAATAGAAA+TGG | - | chr4.4:65614054-65614073 | MS.gene54884:intron | 20.0% |
| !! | TTCAACAAGAGAAAATAAAA+AGG | + | chr4.4:65613800-65613819 | None:intergenic | 20.0% |
| !!! | AAATAATTTGAACTTGTTTG+TGG | - | chr4.4:65613355-65613374 | MS.gene54884:intron | 20.0% |
| !!! | AATAATTTGAACTTGTTTGT+GGG | - | chr4.4:65613356-65613375 | MS.gene54884:intron | 20.0% |
| !!! | AATTTAGTTTTTGAAACTGT+TGG | - | chr4.4:65613492-65613511 | MS.gene54884:intron | 20.0% |
| !!! | AGAGTAAATTTTCATTTTAG+TGG | - | chr4.4:65614092-65614111 | MS.gene54884:intron | 20.0% |
| !!! | ATTCCTTTTTATCTTATTGA+AGG | - | chr4.4:65615989-65616008 | MS.gene54884:intron | 20.0% |
| !!! | ATTGGTCTTTATTAATGTAA+GGG | + | chr4.4:65615512-65615531 | None:intergenic | 20.0% |
| !!! | CAGAGATTTTTATGTAATTT+TGG | - | chr4.4:65614253-65614272 | MS.gene54884:intron | 20.0% |
| !!! | TAAAGAAATATTTTGATCGA+GGG | + | chr4.4:65615544-65615563 | None:intergenic | 20.0% |
| !!! | TTCCTTTTTATCTTATTGAA+GGG | - | chr4.4:65615990-65616009 | MS.gene54884:intron | 20.0% |
| ! | AAAGAAATCCAATTGATCAA+TGG | + | chr4.4:65613989-65614008 | None:intergenic | 25.0% |
| ! | AACAAAAGAAAATTTCCTCA+CGG | + | chr4.4:65613669-65613688 | None:intergenic | 25.0% |
| ! | ACAATTTAGAGAATAGATGT+AGG | + | chr4.4:65614022-65614041 | None:intergenic | 25.0% |
| ! | ACTAAATAAAAGTGAGAATG+AGG | + | chr4.4:65616437-65616456 | None:intergenic | 25.0% |
| ! | ACTAAATTGAAATACCAAAC+AGG | + | chr4.4:65613545-65613564 | None:intergenic | 25.0% |
| ! | ACTATCAAAAGAGATATTTG+AGG | - | chr4.4:65614203-65614222 | MS.gene54884:intron | 25.0% |
| ! | AGAAAAACTTGAATCAAACA+TGG | + | chr4.4:65616275-65616294 | None:intergenic | 25.0% |
| ! | AGATATAGAATCATGTTACA+AGG | + | chr4.4:65616567-65616586 | None:intergenic | 25.0% |
| ! | AGCATAAATTTGAAGATACA+TGG | - | chr4.4:65613890-65613909 | MS.gene54884:intron | 25.0% |
| ! | AGTATCTGATATTCTCTTAT+AGG | - | chr4.4:65613562-65613581 | MS.gene54884:intron | 25.0% |
| ! | ATAAATGGAAAGTAATTACC+TGG | + | chr4.4:65612799-65612818 | None:intergenic | 25.0% |
| ! | ATTCATAATTATGACCTGTA+TGG | - | chr4.4:65613824-65613843 | MS.gene54884:intron | 25.0% |
| ! | ATTGAACGGATATATGTTTA+AGG | - | chr4.4:65613380-65613399 | MS.gene54884:intron | 25.0% |
| ! | ATTTCCCTTGACTAAAAATA+TGG | + | chr4.4:65616118-65616137 | None:intergenic | 25.0% |
| ! | CAAATTTGATTATCTACCAT+TGG | - | chr4.4:65615646-65615665 | MS.gene54884:intron | 25.0% |
| ! | GAAAAACTTGAATCAAACAT+GGG | + | chr4.4:65616274-65616293 | None:intergenic | 25.0% |
| ! | GAGATCTATAAAGGAATATT+TGG | - | chr4.4:65616823-65616842 | MS.gene54884:intron | 25.0% |
| ! | GATAAAAGTTTATAAAGAGG+AGG | - | chr4.4:65614340-65614359 | MS.gene54884:CDS | 25.0% |
| ! | GATACAAGACTAATATTTAC+AGG | + | chr4.4:65614488-65614507 | None:intergenic | 25.0% |
| ! | TATAGTGAGTAAAATTCACA+GGG | - | chr4.4:65614974-65614993 | MS.gene54884:intron | 25.0% |
| ! | TGGTAGATAATCAAATTTGA+AGG | + | chr4.4:65615645-65615664 | None:intergenic | 25.0% |
| ! | TTATAGTGAGTAAAATTCAC+AGG | - | chr4.4:65614973-65614992 | MS.gene54884:intron | 25.0% |
| ! | TTCCCTTCAATAAGATAAAA+AGG | + | chr4.4:65615995-65616014 | None:intergenic | 25.0% |
| ! | TTGCTTATTGAAATTTGGAA+CGG | - | chr4.4:65613420-65613439 | MS.gene54884:intron | 25.0% |
| !! | AATTGCTGAAGAAAATTTTG+AGG | + | chr4.4:65615456-65615475 | None:intergenic | 25.0% |
| !! | GTTTTCATTAAATTGTTGCA+TGG | - | chr4.4:65614930-65614949 | MS.gene54884:CDS | 25.0% |
| !! | TGATTTTCGTGTTTATAAAC+TGG | - | chr4.4:65614042-65614061 | MS.gene54884:intron | 25.0% |
| !! | TGTTGTTGCTTATTGAAATT+TGG | - | chr4.4:65613415-65613434 | MS.gene54884:intron | 25.0% |
| !! | TTTTCTTGACCTACAAAATA+AGG | + | chr4.4:65613004-65613023 | None:intergenic | 25.0% |
| !!! | AAAGTACTGAATATGCAAAA+GGG | - | chr4.4:65613047-65613066 | MS.gene54884:CDS | 25.0% |
| !!! | AAATTGTTTTACCGAGTTTT+GGG | - | chr4.4:65615849-65615868 | MS.gene54884:CDS | 25.0% |
| !!! | ATGCTTGAAGTTTAAAGTTT+TGG | - | chr4.4:65613952-65613971 | MS.gene54884:intron | 25.0% |
| !!! | ATGTAATTTTGGTACATTCA+AGG | - | chr4.4:65614264-65614283 | MS.gene54884:intron | 25.0% |
| !!! | CTAAAGAAATATTTTGATCG+AGG | + | chr4.4:65615545-65615564 | None:intergenic | 25.0% |
| !!! | GATTGGTCTTTATTAATGTA+AGG | + | chr4.4:65615513-65615532 | None:intergenic | 25.0% |
| !!! | TAAATTGTTTTACCGAGTTT+TGG | - | chr4.4:65615848-65615867 | MS.gene54884:CDS | 25.0% |
| !!! | TCTTTAACAGACTTGTTATT+TGG | - | chr4.4:65614694-65614713 | MS.gene54884:CDS | 25.0% |
| !!! | TTGCTATTTCACAAATTTGA+GGG | + | chr4.4:65615483-65615502 | None:intergenic | 25.0% |
| !!! | TTTGCTATTTCACAAATTTG+AGG | + | chr4.4:65615484-65615503 | None:intergenic | 25.0% |
| AAATGAGTGAATTATATCCC+TGG | + | chr4.4:65616326-65616345 | None:intergenic | 30.0% | |
| AAATGTCTCACTCTTTATCA+TGG | + | chr4.4:65616366-65616385 | None:intergenic | 30.0% | |
| AATGAGTGAATTATATCCCT+GGG | + | chr4.4:65616325-65616344 | None:intergenic | 30.0% | |
| AATGTCTCACTCTTTATCAT+GGG | + | chr4.4:65616365-65616384 | None:intergenic | 30.0% | |
| AGCTATTTATCAAAAGCAGA+AGG | - | chr4.4:65616801-65616820 | MS.gene54884:intron | 30.0% | |
| ATTAAATTGTTGCATGGTCA+CGG | - | chr4.4:65614936-65614955 | MS.gene54884:CDS | 30.0% | |
| ATTATGACCTGTATGGTTTA+TGG | - | chr4.4:65613831-65613850 | MS.gene54884:intron | 30.0% | |
| ATTGAGATGGTAATAGGAAA+AGG | - | chr4.4:65613928-65613947 | MS.gene54884:intron | 30.0% | |
| CAAATTATTAAGGAAGGTCA+TGG | - | chr4.4:65613148-65613167 | MS.gene54884:intron | 30.0% | |
| CTGTCATTGTGTTGAAATTT+GGG | + | chr4.4:65614408-65614427 | None:intergenic | 30.0% | |
| GAGTATAGAAGTCAATATGT+AGG | + | chr4.4:65615595-65615614 | None:intergenic | 30.0% | |
| GGTAAGTGAAAAGTTATAGT+TGG | + | chr4.4:65616416-65616435 | None:intergenic | 30.0% | |
| GTATCACATGAGTGAATAAA+TGG | + | chr4.4:65612814-65612833 | None:intergenic | 30.0% | |
| GTTTCAGGAAAATAAACTAG+AGG | - | chr4.4:65615072-65615091 | MS.gene54884:intron | 30.0% | |
| GTTTCATGCTAGTAGAAAAA+AGG | - | chr4.4:65613291-65613310 | MS.gene54884:intron | 30.0% | |
| TAAAATTTCTGCGATTTCCT+GGG | - | chr4.4:65616298-65616317 | MS.gene54884:intron | 30.0% | |
| TAAATTTGAAGATACATGGC+AGG | - | chr4.4:65613894-65613913 | MS.gene54884:intron | 30.0% | |
| TATAGGAACTAATGTGTTCA+AGG | - | chr4.4:65613579-65613598 | MS.gene54884:intron | 30.0% | |
| TCAATATGTAGGTCTTTCAT+CGG | + | chr4.4:65615584-65615603 | None:intergenic | 30.0% | |
| TCATAAACTAAATCTGCCAT+TGG | + | chr4.4:65614872-65614891 | None:intergenic | 30.0% | |
| TCGAATTTCATGTATGATTG+AGG | - | chr4.4:65612975-65612994 | MS.gene54884:CDS | 30.0% | |
| TGTCATTGTGTTGAAATTTG+GGG | + | chr4.4:65614407-65614426 | None:intergenic | 30.0% | |
| TTAAAATTTCTGCGATTTCC+TGG | - | chr4.4:65616297-65616316 | MS.gene54884:intron | 30.0% | |
| TTATCATGGGAATGAAAAAG+CGG | + | chr4.4:65616352-65616371 | None:intergenic | 30.0% | |
| TTTCAACAAATGACTTCTGT+TGG | + | chr4.4:65616604-65616623 | None:intergenic | 30.0% | |
| TTTCCTATTACCATCTCAAT+TGG | + | chr4.4:65613928-65613947 | None:intergenic | 30.0% | |
| ! | ACAAAAGCATGTTGAATACT+TGG | + | chr4.4:65613185-65613204 | None:intergenic | 30.0% |
| ! | ATTCAACATGCTTTTGTAAG+TGG | - | chr4.4:65613188-65613207 | MS.gene54884:intron | 30.0% |
| ! | ATTTTTACCAAAGTGAGCTT+TGG | - | chr4.4:65616237-65616256 | MS.gene54884:intron | 30.0% |
| ! | GGAATTGGTTCATATTTGTT+TGG | - | chr4.4:65616875-65616894 | MS.gene54884:intron | 30.0% |
| ! | TCAACTTCAGAATCAACTTT+TGG | + | chr4.4:65613103-65613122 | None:intergenic | 30.0% |
| ! | TTTGAATGACCCAAATGTTT+TGG | - | chr4.4:65613639-65613658 | MS.gene54884:intron | 30.0% |
| !! | AAGTACTGAATATGCAAAAG+GGG | - | chr4.4:65613048-65613067 | MS.gene54884:CDS | 30.0% |
| !! | CTTTTGTTTAGACTGAATGT+GGG | - | chr4.4:65613681-65613700 | MS.gene54884:intron | 30.0% |
| !! | GAAAGTACTGAATATGCAAA+AGG | - | chr4.4:65613046-65613065 | MS.gene54884:CDS | 30.0% |
| !! | GCAATTTGAAGGCTTTATTT+AGG | - | chr4.4:65616650-65616669 | MS.gene54884:CDS | 30.0% |
| !! | GTTTGCTAAGTTGATTATCT+TGG | - | chr4.4:65615206-65615225 | MS.gene54884:intron | 30.0% |
| !! | TCTTTTGTTTAGACTGAATG+TGG | - | chr4.4:65613680-65613699 | MS.gene54884:intron | 30.0% |
| !!! | CATCTTTGTGCTTTTTTTCA+CGG | + | chr4.4:65616945-65616964 | None:intergenic | 30.0% |
| !!! | CTTGCCATATTTTTAGTCAA+GGG | - | chr4.4:65616111-65616130 | MS.gene54884:intron | 30.0% |
| !!! | GACTTGTTATTTGGTTTTGA+TGG | - | chr4.4:65614703-65614722 | MS.gene54884:CDS | 30.0% |
| !!! | TAATTACCTGGTTTTGATTG+TGG | + | chr4.4:65612787-65612806 | None:intergenic | 30.0% |
| !!! | TCTTGCCATATTTTTAGTCA+AGG | - | chr4.4:65616110-65616129 | MS.gene54884:intron | 30.0% |
| !!! | TTGAGGAAACCTTATTTTGT+AGG | - | chr4.4:65612992-65613011 | MS.gene54884:CDS | 30.0% |
| AAACTTGCAGGTATTAAGTG+AGG | - | chr4.4:65616621-65616640 | MS.gene54884:CDS | 35.0% | |
| AAAGAGTGAGACATTTCCAT+GGG | - | chr4.4:65616370-65616389 | MS.gene54884:intron | 35.0% | |
| AACCATTTCATACTGTTGCA+TGG | + | chr4.4:65615101-65615120 | None:intergenic | 35.0% | |
| AAGCAGAAGGAGATCTATAA+AGG | - | chr4.4:65616814-65616833 | MS.gene54884:intron | 35.0% | |
| AAGCATGTTGAATACTTGGA+AGG | + | chr4.4:65613181-65613200 | None:intergenic | 35.0% | |
| ACAGAGAAGAAAGAAATGAC+TGG | - | chr4.4:65614737-65614756 | MS.gene54884:intron | 35.0% | |
| ACGTGAAGCAAAACTGTATT+AGG | - | chr4.4:65613712-65613731 | MS.gene54884:intron | 35.0% | |
| ACTTCATGTTCCAGTTGTTT+GGG | - | chr4.4:65615261-65615280 | MS.gene54884:intron | 35.0% | |
| ACTTGTTTGTGGGAATTGAA+CGG | - | chr4.4:65613366-65613385 | MS.gene54884:intron | 35.0% | |
| AGTTGAAGTTCTTCATGAGA+AGG | - | chr4.4:65613117-65613136 | MS.gene54884:intron | 35.0% | |
| ATTCAAGGACTACAGTGTAT+TGG | - | chr4.4:65614279-65614298 | MS.gene54884:intron | 35.0% | |
| CACGGTAAACCAAAACATTT+GGG | + | chr4.4:65613651-65613670 | None:intergenic | 35.0% | |
| CTAACTCATCCTTACAAAAC+CGG | + | chr4.4:65614384-65614403 | None:intergenic | 35.0% | |
| GAATTAGGATATGGAAAGGA+AGG | - | chr4.4:65614821-65614840 | MS.gene54884:CDS | 35.0% | |
| GCTGTCATTGTGTTGAAATT+TGG | + | chr4.4:65614409-65614428 | None:intergenic | 35.0% | |
| GGACTACTCAATAATTCTTC+AGG | + | chr4.4:65613079-65613098 | None:intergenic | 35.0% | |
| GTTTATGAAGTTGAGCTCAT+TGG | - | chr4.4:65614884-65614903 | MS.gene54884:CDS | 35.0% | |
| TAAACTAAATCTGCCATTGG+TGG | + | chr4.4:65614869-65614888 | None:intergenic | 35.0% | |
| TAAAGAGTGAGACATTTCCA+TGG | - | chr4.4:65616369-65616388 | MS.gene54884:intron | 35.0% | |
| TAGTGGCTTAATGTGTAAGA+CGG | - | chr4.4:65614109-65614128 | MS.gene54884:intron | 35.0% | |
| TATCTACCATTGGAGTTCAA+TGG | - | chr4.4:65615656-65615675 | MS.gene54884:intron | 35.0% | |
| TATGGCAAGATATGCTTAGT+AGG | + | chr4.4:65616100-65616119 | None:intergenic | 35.0% | |
| TCACGGTAAACCAAAACATT+TGG | + | chr4.4:65613652-65613671 | None:intergenic | 35.0% | |
| TCAGGAAAATAAACTAGAGG+AGG | - | chr4.4:65615075-65615094 | MS.gene54884:intron | 35.0% | |
| TCTTGTGTCCATTGATCAAT+TGG | - | chr4.4:65613978-65613997 | MS.gene54884:intron | 35.0% | |
| TGAAAAGTTATAGTTGGCTG+AGG | + | chr4.4:65616410-65616429 | None:intergenic | 35.0% | |
| TGATTATCTTGGTTCATGTC+AGG | - | chr4.4:65615217-65615236 | MS.gene54884:intron | 35.0% | |
| TTACAATCCAAAGCTCACTT+TGG | + | chr4.4:65616247-65616266 | None:intergenic | 35.0% | |
| TTCAAGGACTACAGTGTATT+GGG | - | chr4.4:65614280-65614299 | MS.gene54884:intron | 35.0% | |
| TTTAGTCCATTGAACTCCAA+TGG | + | chr4.4:65615665-65615684 | None:intergenic | 35.0% | |
| TTTATGTCCTTGGAGTTCTA+AGG | + | chr4.4:65615726-65615745 | None:intergenic | 35.0% | |
| ! | ACATCTTTGATCAGAAGTGT+TGG | - | chr4.4:65612931-65612950 | MS.gene54884:CDS | 35.0% |
| ! | ACTTCAGAATCAACTTTTGG+AGG | + | chr4.4:65613100-65613119 | None:intergenic | 35.0% |
| ! | AGGTCTAGAATTGTTGAATG+TGG | - | chr4.4:65613311-65613330 | MS.gene54884:intron | 35.0% |
| ! | AGTCATTTGTTGAAACTTGC+AGG | - | chr4.4:65616609-65616628 | MS.gene54884:CDS | 35.0% |
| ! | ATGAACCAATTCCTTTTCTG+TGG | + | chr4.4:65616868-65616887 | None:intergenic | 35.0% |
| ! | TCAAAGTCATGCTGTTTGAT+TGG | - | chr4.4:65615779-65615798 | MS.gene54884:intron | 35.0% |
| ! | TTATGTCCTTGGAGTTCTAA+GGG | + | chr4.4:65615725-65615744 | None:intergenic | 35.0% |
| ! | TTTTCCAAATGTTCCACCAA+TGG | - | chr4.4:65614853-65614872 | MS.gene54884:CDS | 35.0% |
| ! | TTTTTCACGGTTGAAAAGTG+TGG | + | chr4.4:65616932-65616951 | None:intergenic | 35.0% |
| !! | AAGAAAGAAATGACTGGCTT+GGG | - | chr4.4:65614743-65614762 | MS.gene54884:intron | 35.0% |
| !! | AGCTTTTAGAAAATCTTCCC+TGG | + | chr4.4:65616716-65616735 | None:intergenic | 35.0% |
| !! | TTGAAGGCTTTATTTAGGAG+AGG | - | chr4.4:65616655-65616674 | MS.gene54884:CDS | 35.0% |
| !!! | AAATGTTTTGGTTTACCGTG+AGG | - | chr4.4:65613651-65613670 | MS.gene54884:intron | 35.0% |
| AAAGTTATAGTTGGCTGAGG+AGG | + | chr4.4:65616407-65616426 | None:intergenic | 40.0% | |
| AACCGCTATGAAGAAGCTAT+AGG | - | chr4.4:65615356-65615375 | MS.gene54884:intron | 40.0% | |
| ACTACCACCATAAACCATAC+AGG | + | chr4.4:65613841-65613860 | None:intergenic | 40.0% | |
| AGAGCTCATAAGAAGAGTAG+AGG | + | chr4.4:65613766-65613785 | None:intergenic | 40.0% | |
| AGTAGACTCAACCCAAAACT+CGG | + | chr4.4:65615863-65615882 | None:intergenic | 40.0% | |
| ATCAAAGATGTGTCTGGTGT+CGG | + | chr4.4:65612922-65612941 | None:intergenic | 40.0% | |
| ATGACCTGTATGGTTTATGG+TGG | - | chr4.4:65613834-65613853 | MS.gene54884:intron | 40.0% | |
| ATTTGAGGACCAAACTCACT+AGG | - | chr4.4:65614218-65614237 | MS.gene54884:intron | 40.0% | |
| CAGTACCACAGAAAAGGAAT+TGG | - | chr4.4:65616860-65616879 | MS.gene54884:intron | 40.0% | |
| CATATTTGTTTGGCAGTGGT+TGG | - | chr4.4:65616885-65616904 | MS.gene54884:intron | 40.0% | |
| CGACCAATTGAGATGGTAAT+AGG | - | chr4.4:65613922-65613941 | MS.gene54884:intron | 40.0% | |
| CTGGGAATTAGGATATGGAA+AGG | - | chr4.4:65614817-65614836 | MS.gene54884:CDS | 40.0% | |
| CTGTCTAAGAATGCTTTCAC+TGG | + | chr4.4:65616061-65616080 | None:intergenic | 40.0% | |
| CTTCTGATCAAAGATGTGTC+TGG | + | chr4.4:65612928-65612947 | None:intergenic | 40.0% | |
| GAATCCATGCCATCTTAACA+CGG | - | chr4.4:65615313-65615332 | MS.gene54884:intron | 40.0% | |
| GACGCATTGAAGGACAAAAA+TGG | - | chr4.4:65614433-65614452 | MS.gene54884:CDS | 40.0% | |
| GACTTCATGTTCCAGTTGTT+TGG | - | chr4.4:65615260-65615279 | MS.gene54884:intron | 40.0% | |
| GGATGGAAATGTTCTGTTTC+AGG | - | chr4.4:65615057-65615076 | MS.gene54884:intron | 40.0% | |
| GGTTCATATTTGTTTGGCAG+TGG | - | chr4.4:65616881-65616900 | MS.gene54884:intron | 40.0% | |
| GTCCTATAGCTTCTTCATAG+CGG | + | chr4.4:65615361-65615380 | None:intergenic | 40.0% | |
| GTGATATGACTGTAGAGGAA+CGG | - | chr4.4:65615008-65615027 | MS.gene54884:intron | 40.0% | |
| TATGGTGGTAGTCCATTACA+GGG | - | chr4.4:65613849-65613868 | MS.gene54884:intron | 40.0% | |
| TCACTCAGCATTTATGTCCT+TGG | + | chr4.4:65615736-65615755 | None:intergenic | 40.0% | |
| TCTCAACCACAATCAAAACC+AGG | - | chr4.4:65612778-65612797 | MS.gene54884:CDS | 40.0% | |
| TGAGGATGAGAGCAATTTGA+AGG | - | chr4.4:65616639-65616658 | MS.gene54884:CDS | 40.0% | |
| TTATGACATCTAGCGTAGTG+TGG | - | chr4.4:65614634-65614653 | MS.gene54884:CDS | 40.0% | |
| TTATGGTGGTAGTCCATTAC+AGG | - | chr4.4:65613848-65613867 | MS.gene54884:intron | 40.0% | |
| TTTGTCCTTCAATGCGTCAA+GGG | + | chr4.4:65614431-65614450 | None:intergenic | 40.0% | |
| ! | AATGAGTTCTGGCAAATGAC+AGG | - | chr4.4:65614542-65614561 | MS.gene54884:intron | 40.0% |
| ! | ATGAGTTCTGGCAAATGACA+GGG | - | chr4.4:65614543-65614562 | MS.gene54884:intron | 40.0% |
| ! | ATTGAGTTCTGGCAAATGAC+AGG | - | chr4.4:65614514-65614533 | MS.gene54884:intron | 40.0% |
| ! | CAATTCCTTTTCTGTGGTAC+TGG | + | chr4.4:65616862-65616881 | None:intergenic | 40.0% |
| ! | CCAGTTGTTTGGGAAGTATA+GGG | - | chr4.4:65615271-65615290 | MS.gene54884:intron | 40.0% |
| ! | GAAGAAAGAAATGACTGGCT+TGG | - | chr4.4:65614742-65614761 | MS.gene54884:intron | 40.0% |
| ! | GTTTGGGAAGTATAGGGATA+TGG | - | chr4.4:65615277-65615296 | MS.gene54884:intron | 40.0% |
| ! | TCCAGTTGTTTGGGAAGTAT+AGG | - | chr4.4:65615270-65615289 | MS.gene54884:intron | 40.0% |
| ! | TGTCATTTGCCAGAACTCAA+TGG | + | chr4.4:65614515-65614534 | None:intergenic | 40.0% |
| ! | TGTCATTTGCCAGAACTCAT+TGG | + | chr4.4:65614543-65614562 | None:intergenic | 40.0% |
| ! | TTGAGTTCTGGCAAATGACA+GGG | - | chr4.4:65614515-65614534 | MS.gene54884:intron | 40.0% |
| ! | TTTTGTCCTTCAATGCGTCA+AGG | + | chr4.4:65614432-65614451 | None:intergenic | 40.0% |
| !! | GGCTTTATTTAGGAGAGGTA+AGG | - | chr4.4:65616660-65616679 | MS.gene54884:CDS | 40.0% |
| !!! | AGGTCTTTCATCGGTTTTGA+TGG | + | chr4.4:65615575-65615594 | None:intergenic | 40.0% |
| AGAGTCTCATCTATCCGATG+TGG | + | chr4.4:65614319-65614338 | None:intergenic | 45.0% | |
| AGCATGAGCGCACAATATTG+AGG | - | chr4.4:65615911-65615930 | MS.gene54884:intron | 45.0% | |
| AGTCGTGTATCAGTCCTGTT+TGG | - | chr4.4:65613528-65613547 | MS.gene54884:intron | 45.0% | |
| ATCTATCCGATGTGGGACTT+GGG | + | chr4.4:65614311-65614330 | None:intergenic | 45.0% | |
| ATGACTGTAGAGGAACGGAT+TGG | - | chr4.4:65615013-65615032 | MS.gene54884:intron | 45.0% | |
| ATGTCAGGCCATAGCTTACA+TGG | - | chr4.4:65615232-65615251 | MS.gene54884:intron | 45.0% | |
| CCCTATACTTCCCAAACAAC+TGG | + | chr4.4:65615274-65615293 | None:intergenic | 45.0% | |
| CTGAACCAGTACCACAGAAA+AGG | - | chr4.4:65616854-65616873 | MS.gene54884:intron | 45.0% | |
| GAAAAACCCAAGTCCCACAT+CGG | - | chr4.4:65614302-65614321 | MS.gene54884:intron | 45.0% | |
| GAAGTATAGGGATATGGCTC+TGG | - | chr4.4:65615283-65615302 | MS.gene54884:intron | 45.0% | |
| GAGTCTCATCTATCCGATGT+GGG | + | chr4.4:65614318-65614337 | None:intergenic | 45.0% | |
| GATCGAGGGACGAAATTGAT+TGG | + | chr4.4:65615530-65615549 | None:intergenic | 45.0% | |
| GCATCTTGTCCTAGTGAGTT+TGG | + | chr4.4:65614230-65614249 | None:intergenic | 45.0% | |
| GCATTCTTAGACAGAAGCTG+TGG | - | chr4.4:65616067-65616086 | MS.gene54884:intron | 45.0% | |
| GGAGGTAATTTCTACTCCCA+TGG | + | chr4.4:65616389-65616408 | None:intergenic | 45.0% | |
| GGCCATGCAACAGTATGAAA+TGG | - | chr4.4:65615096-65615115 | MS.gene54884:intron | 45.0% | |
| GTATCCATGCCATTGAGTTC+TGG | - | chr4.4:65614503-65614522 | MS.gene54884:intron | 45.0% | |
| GTCATCTCCCATGTAAGCTA+TGG | + | chr4.4:65615243-65615262 | None:intergenic | 45.0% | |
| GTGAGCTGGGAATTAGGATA+TGG | - | chr4.4:65614812-65614831 | MS.gene54884:CDS | 45.0% | |
| TCGCAGTGATATGACTGTAG+AGG | - | chr4.4:65615003-65615022 | MS.gene54884:intron | 45.0% | |
| TCTGCCATTGGTGGAACATT+TGG | + | chr4.4:65614860-65614879 | None:intergenic | 45.0% | |
| TGTCAGGCCATAGCTTACAT+GGG | - | chr4.4:65615233-65615252 | MS.gene54884:intron | 45.0% | |
| TGTTGCGTCAGTGTTGTATC+TGG | + | chr4.4:65612842-65612861 | None:intergenic | 45.0% | |
| TTTGCCAGAACTCAATGGCA+TGG | + | chr4.4:65614510-65614529 | None:intergenic | 45.0% | |
| ! | TGACTGTAGAGGAACGGATT+GGG | - | chr4.4:65615014-65615033 | MS.gene54884:intron | 45.0% |
| ! | TGCTCACACGTTTTGTCGTA+AGG | - | chr4.4:65615966-65615985 | MS.gene54884:intron | 45.0% |
| !! | AAATGACTGGCTTGGGCATT+GGG | - | chr4.4:65614750-65614769 | MS.gene54884:intron | 45.0% |
| !! | CCTTACAAAACCGGCTTGTA+AGG | + | chr4.4:65614375-65614394 | None:intergenic | 45.0% |
| !! | CCTTACAAGCCGGTTTTGTA+AGG | - | chr4.4:65614372-65614391 | MS.gene54884:CDS | 45.0% |
| !! | GAAGTGTTGGTGTTACAGAG+AGG | - | chr4.4:65612944-65612963 | MS.gene54884:CDS | 45.0% |
| !!! | CTTTTCTGTGGTACTGGTTC+AGG | + | chr4.4:65616856-65616875 | None:intergenic | 45.0% |
| CATCTATCCGATGTGGGACT+TGG | + | chr4.4:65614312-65614331 | None:intergenic | 50.0% | |
| GAATTATATCCCTGGGACCC+AGG | + | chr4.4:65616318-65616337 | None:intergenic | 50.0% | |
| GCAGATCGGAGAAAGATGGA+TGG | - | chr4.4:65615040-65615059 | MS.gene54884:intron | 50.0% | |
| GCGGTTCAGCTTAATCAGAC+AGG | + | chr4.4:65615342-65615361 | None:intergenic | 50.0% | |
| GGAACGGCTTTCGTTGTATC+TGG | - | chr4.4:65613436-65613455 | MS.gene54884:intron | 50.0% | |
| GGAGCAACGACCAATTGAGA+TGG | - | chr4.4:65613915-65613934 | MS.gene54884:intron | 50.0% | |
| GTAAGGCTAGAGCAGCACTT+GGG | - | chr4.4:65616677-65616696 | MS.gene54884:CDS | 50.0% | |
| TACCGACCCTTAGAACTCCA+AGG | - | chr4.4:65615716-65615735 | MS.gene54884:intron | 50.0% | |
| TCCATGCCATCTTAACACGG+CGG | - | chr4.4:65615316-65615335 | MS.gene54884:intron | 50.0% | |
| !! | AATGACTGGCTTGGGCATTG+GGG | - | chr4.4:65614751-65614770 | MS.gene54884:intron | 50.0% |
| !! | CAAAACCGGCTTGTAAGGTG+AGG | + | chr4.4:65614370-65614389 | None:intergenic | 50.0% |
| !! | GAAATGACTGGCTTGGGCAT+TGG | - | chr4.4:65614749-65614768 | MS.gene54884:intron | 50.0% |
| !! | GACTGTAGAGGAACGGATTG+GGG | - | chr4.4:65615015-65615034 | MS.gene54884:intron | 50.0% |
| !! | GTCCTTGGAGTTCTAAGGGT+CGG | + | chr4.4:65615721-65615740 | None:intergenic | 50.0% |
| !! | TGTGGTACTGGTTCAGGTCT+TGG | + | chr4.4:65616850-65616869 | None:intergenic | 50.0% |
| CTGCGTGTGAGCTGGGAATT+AGG | - | chr4.4:65614806-65614825 | MS.gene54884:CDS | 55.0% | |
| GACAGCCCTTGACGCATTGA+AGG | - | chr4.4:65614423-65614442 | MS.gene54884:CDS | 55.0% | |
| GCACTCCTCACCTTACAAGC+CGG | - | chr4.4:65614362-65614381 | MS.gene54884:CDS | 55.0% | |
| GGCAGCAGATCGGAGAAAGA+TGG | - | chr4.4:65615036-65615055 | MS.gene54884:intron | 55.0% | |
| GGGTGGCAAGCATGAAAGCT+GGG | - | chr4.4:65614771-65614790 | MS.gene54884:intron | 55.0% | |
| GGTAAGGCTAGAGCAGCACT+TGG | - | chr4.4:65616676-65616695 | MS.gene54884:CDS | 55.0% | |
| GGTGGCAAGCATGAAAGCTG+GGG | - | chr4.4:65614772-65614791 | MS.gene54884:intron | 55.0% | |
| TCTCAGACCACGCCCTGTAA+TGG | + | chr4.4:65613864-65613883 | None:intergenic | 55.0% | |
| TGGGCAGACAGATGTTGCCA+GGG | - | chr4.4:65616696-65616715 | MS.gene54884:CDS | 55.0% | |
| TGGTAGTCCATTACAGGGCG+TGG | - | chr4.4:65613854-65613873 | MS.gene54884:intron | 55.0% | |
| TTGGGCAGACAGATGTTGCC+AGG | - | chr4.4:65616695-65616714 | MS.gene54884:CDS | 55.0% | |
| ! | GACAGGGTGCCAATGAGTTC+TGG | - | chr4.4:65614531-65614550 | MS.gene54884:intron | 55.0% |
| !! | AACGGATTGGGGCAGCAGAT+CGG | - | chr4.4:65615026-65615045 | MS.gene54884:intron | 55.0% |
| AGCGTTGCTGCGTGTGAGCT+GGG | - | chr4.4:65614799-65614818 | MS.gene54884:intron | 60.0% | |
| CAGGGCGTGGTCTGAGAACA+CGG | - | chr4.4:65613867-65613886 | MS.gene54884:intron | 60.0% | |
| CTGCGATTTCCTGGGTCCCA+GGG | - | chr4.4:65616306-65616325 | MS.gene54884:intron | 60.0% | |
| GACAGGCCGCCGTGTTAAGA+TGG | + | chr4.4:65615325-65615344 | None:intergenic | 60.0% | |
| GCCGCCGTGTTAAGATGGCA+TGG | + | chr4.4:65615320-65615339 | None:intergenic | 60.0% | |
| GGGGTGGCAAGCATGAAAGC+TGG | - | chr4.4:65614770-65614789 | MS.gene54884:intron | 60.0% | |
| TCTGCGATTTCCTGGGTCCC+AGG | - | chr4.4:65616305-65616324 | MS.gene54884:intron | 60.0% | |
| ! | GAGCGTTGCTGCGTGTGAGC+TGG | - | chr4.4:65614798-65614817 | MS.gene54884:intron | 65.0% |
| !! | GACTGGCTTGGGCATTGGGG+TGG | - | chr4.4:65614754-65614773 | MS.gene54884:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 65612760 | 65616969 | 65612760 | ID=MS.gene54884 |
| chr4.4 | mRNA | 65612760 | 65616969 | 65612760 | ID=MS.gene54884.t1;Parent=MS.gene54884 |
| chr4.4 | exon | 65616930 | 65616969 | 65616930 | ID=MS.gene54884.t1.exon1;Parent=MS.gene54884.t1 |
| chr4.4 | CDS | 65616930 | 65616969 | 65616930 | ID=cds.MS.gene54884.t1;Parent=MS.gene54884.t1 |
| chr4.4 | exon | 65616527 | 65616715 | 65616527 | ID=MS.gene54884.t1.exon2;Parent=MS.gene54884.t1 |
| chr4.4 | CDS | 65616527 | 65616715 | 65616527 | ID=cds.MS.gene54884.t1;Parent=MS.gene54884.t1 |
| chr4.4 | exon | 65615780 | 65615869 | 65615780 | ID=MS.gene54884.t1.exon3;Parent=MS.gene54884.t1 |
| chr4.4 | CDS | 65615780 | 65615869 | 65615780 | ID=cds.MS.gene54884.t1;Parent=MS.gene54884.t1 |
| chr4.4 | exon | 65614804 | 65614988 | 65614804 | ID=MS.gene54884.t1.exon4;Parent=MS.gene54884.t1 |
| chr4.4 | CDS | 65614804 | 65614988 | 65614804 | ID=cds.MS.gene54884.t1;Parent=MS.gene54884.t1 |
| chr4.4 | exon | 65614612 | 65614734 | 65614612 | ID=MS.gene54884.t1.exon5;Parent=MS.gene54884.t1 |
| chr4.4 | CDS | 65614612 | 65614734 | 65614612 | ID=cds.MS.gene54884.t1;Parent=MS.gene54884.t1 |
| chr4.4 | exon | 65614338 | 65614490 | 65614338 | ID=MS.gene54884.t1.exon6;Parent=MS.gene54884.t1 |
| chr4.4 | CDS | 65614338 | 65614490 | 65614338 | ID=cds.MS.gene54884.t1;Parent=MS.gene54884.t1 |
| chr4.4 | exon | 65612760 | 65613098 | 65612760 | ID=MS.gene54884.t1.exon7;Parent=MS.gene54884.t1 |
| chr4.4 | CDS | 65612760 | 65613098 | 65612760 | ID=cds.MS.gene54884.t1;Parent=MS.gene54884.t1 |
| Gene Sequence |
| Protein sequence |
