AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene56006

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene56006.t1 MTR_2g034440 96.094 128 5 0 9 136 1 128 1.24e-85 253
MS.gene56006.t1 MTR_2g034470 91.912 136 11 0 1 136 1 136 1.46e-76 231
MS.gene56006.t1 MTR_2g034470 92.079 101 8 0 36 136 1 101 2.95e-61 191
MS.gene56006.t1 MTR_2g034480 69.767 129 38 1 9 136 5 133 2.57e-57 182
MS.gene56006.t1 MTR_4g076570 53.153 111 50 1 26 136 18 126 4.48e-33 119
MS.gene56006.t1 MTR_1g052430 55.000 100 45 0 27 126 29 128 7.49e-33 119
MS.gene56006.t1 MTR_4g076470 45.238 126 67 2 9 133 1 125 1.99e-30 111
MS.gene56006.t1 MTR_4g076490 48.649 111 56 1 23 133 90 199 2.24e-28 107
MS.gene56006.t1 MTR_4g076255 51.402 107 49 3 21 126 15 119 5.95e-28 105
MS.gene56006.t1 MTR_4g076440 44.000 125 68 2 9 132 1 124 8.23e-28 104
MS.gene56006.t1 MTR_4g076430 42.857 126 70 2 9 133 1 125 6.08e-27 102
MS.gene56006.t1 MTR_4g076500 48.454 97 50 0 30 126 78 174 9.96e-27 102
MS.gene56006.t1 MTR_8g012400 39.316 117 71 0 8 124 7 123 1.03e-23 95.1
MS.gene56006.t1 MTR_4g036775 50.000 84 39 1 12 92 1 84 1.97e-23 91.3
MS.gene56006.t1 MTR_7g081370 40.476 126 73 2 9 133 6 130 3.37e-23 92.4
MS.gene56006.t1 MTR_4g069940 40.625 128 74 1 6 131 3 130 7.50e-23 92.8
MS.gene56006.t1 MTR_7g081350 38.760 129 78 1 5 133 2 129 2.49e-22 90.5
MS.gene56006.t1 MTR_7g053500 39.583 96 58 0 29 124 25 120 2.60e-22 91.3
MS.gene56006.t1 MTR_3g116510 37.190 121 74 1 6 124 2 122 6.08e-22 90.5
MS.gene56006.t1 MTR_1g031900 41.739 115 66 1 11 124 4 118 1.03e-21 89.7
MS.gene56006.t1 MTR_1g031900 41.739 115 66 1 11 124 4 118 1.35e-21 89.4
MS.gene56006.t1 MTR_4g036680 61.905 63 24 0 30 92 22 84 1.79e-21 85.9
MS.gene56006.t1 MTR_4g088155 36.607 112 71 0 13 124 6 117 1.19e-20 86.7
MS.gene56006.t1 MTR_1g056640 39.796 98 59 0 27 124 35 132 1.60e-20 86.3
MS.gene56006.t1 MTR_6g088885 37.895 95 59 0 30 124 27 121 7.41e-20 84.7
MS.gene56006.t1 MTR_3g080410 40.566 106 63 0 19 124 15 120 1.15e-19 83.6
MS.gene56006.t1 MTR_3g083580 39.474 114 65 1 15 124 7 120 2.98e-19 82.8
MS.gene56006.t1 MTR_4g114850 35.455 110 69 1 21 130 17 124 3.40e-19 82.0
MS.gene56006.t1 MTR_4g114850 35.455 110 69 1 21 130 17 124 3.51e-19 82.4
MS.gene56006.t1 MTR_4g114850 35.455 110 69 1 21 130 17 124 5.17e-19 81.6
MS.gene56006.t1 MTR_3g065460 38.938 113 68 1 12 124 7 118 5.57e-19 82.0
MS.gene56006.t1 MTR_8g085720 38.938 113 66 1 12 124 11 120 1.81e-18 80.5
MS.gene56006.t1 MTR_1g010120 39.474 114 63 2 12 123 12 121 6.08e-18 79.0
MS.gene56006.t1 MTR_4g010200 34.127 126 81 1 1 124 2 127 1.15e-17 78.2
MS.gene56006.t1 MTR_3g108600 35.000 120 76 1 6 123 7 126 1.92e-17 77.8
MS.gene56006.t1 MTR_1g007810 44.792 96 51 2 30 124 16 110 8.09e-17 75.5
MS.gene56006.t1 MTR_5g078200 37.168 113 70 1 12 124 6 117 5.20e-16 73.6
MS.gene56006.t1 MTR_4g052970 37.255 102 63 1 23 124 22 122 7.71e-16 72.8
MS.gene56006.t1 MTR_5g085580 37.755 98 61 0 27 124 22 119 1.20e-15 72.4
MS.gene56006.t1 MTR_6g032820 34.483 116 72 2 11 123 7 121 2.60e-15 71.6
MS.gene56006.t1 MTR_1g022160 34.737 95 62 0 30 124 24 118 2.71e-15 71.6
MS.gene56006.t1 MTR_1g022160 34.737 95 62 0 30 124 24 118 4.95e-15 70.9
MS.gene56006.t1 MTR_2g086530 35.246 122 71 3 6 124 4 120 5.06e-15 70.5
MS.gene56006.t1 MTR_1g022160 34.737 95 62 0 30 124 24 118 6.11e-15 70.5
MS.gene56006.t1 MTR_1g022160 34.737 95 62 0 30 124 24 118 6.35e-15 70.5
MS.gene56006.t1 MTR_7g026340 39.583 96 56 2 30 124 23 117 6.38e-15 70.5
MS.gene56006.t1 MTR_4g112025 31.858 113 75 2 13 123 14 126 7.41e-15 70.5
MS.gene56006.t1 MTR_3g031770 34.234 111 72 1 27 136 24 134 7.46e-15 70.1
MS.gene56006.t1 MTR_7g085390 40.625 96 54 2 30 123 26 120 8.41e-15 70.1
MS.gene56006.t1 MTR_4g132280 35.789 95 61 0 30 124 45 139 1.05e-14 69.7
MS.gene56006.t1 MTR_1g077990 37.255 102 63 1 23 124 24 124 1.06e-14 69.7
MS.gene56006.t1 MTR_2g086530 40.206 97 51 2 30 124 8 99 2.32e-14 68.6
MS.gene56006.t1 MTR_4g124440 36.975 119 69 4 11 124 7 124 3.35e-14 68.6
MS.gene56006.t1 MTR_1g053320 32.231 121 77 2 5 123 8 125 5.37e-14 67.8
MS.gene56006.t1 MTR_4g084480 35.088 114 72 2 12 124 6 118 2.41e-13 65.9
MS.gene56006.t1 MTR_4g084480 35.088 114 72 2 12 124 13 125 2.45e-13 65.9
MS.gene56006.t1 MTR_4g084480 35.088 114 72 2 12 124 13 125 2.60e-13 65.9
MS.gene56006.t1 MTR_5g078200 38.095 84 52 0 41 124 1 84 5.17e-13 65.1
MS.gene56006.t1 MTR_2g027560 32.727 110 72 1 26 133 24 133 2.71e-12 62.8
MS.gene56006.t1 MTR_8g092070 32.000 100 66 1 26 123 30 129 1.32e-11 60.8
MS.gene56006.t1 MTR_2g019345 31.148 122 74 3 7 124 2 117 1.61e-11 60.8
MS.gene56006.t1 MTR_5g081720 38.889 72 44 0 56 127 63 134 7.15e-11 58.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene56006.t1 AT4G16260 60.163 123 46 3 9 129 1 122 3.58e-43 145
MS.gene56006.t1 AT4G16260 61.702 94 35 1 36 129 1 93 5.93e-34 120
MS.gene56006.t1 AT3G57260 50.000 120 58 2 12 129 13 132 1.16e-32 117
MS.gene56006.t1 AT3G57260 50.000 120 58 2 12 129 29 148 1.34e-32 117
MS.gene56006.t1 AT3G57270 50.435 115 57 0 19 133 16 130 1.72e-32 117
MS.gene56006.t1 AT3G57240 53.774 106 48 1 28 133 33 137 2.02e-31 114
MS.gene56006.t1 AT5G42720 40.650 123 69 2 11 131 7 127 1.50e-24 97.4
MS.gene56006.t1 AT4G29360 40.984 122 68 1 14 131 7 128 7.71e-24 95.9
MS.gene56006.t1 AT4G29360 43.810 105 59 0 27 131 34 138 1.89e-23 94.7
MS.gene56006.t1 AT5G56590 40.625 96 57 0 28 123 24 119 2.46e-22 91.7
MS.gene56006.t1 AT3G07320 41.837 98 57 0 27 124 22 119 4.02e-21 88.2
MS.gene56006.t1 AT4G34480 41.053 95 56 0 30 124 26 120 1.05e-20 86.3
MS.gene56006.t1 AT1G77790 39.683 126 64 2 19 133 8 132 2.24e-20 85.1
MS.gene56006.t1 AT5G20560 36.842 114 71 1 14 126 18 131 3.50e-20 84.7
MS.gene56006.t1 AT4G34480 41.053 95 56 0 30 124 26 120 5.08e-20 85.1
MS.gene56006.t1 AT2G01630 43.158 95 54 0 30 124 23 117 5.31e-20 84.7
MS.gene56006.t1 AT2G01630 43.158 95 54 0 30 124 23 117 7.05e-20 84.3
MS.gene56006.t1 AT2G16230 44.211 95 53 0 30 124 25 119 8.51e-20 84.3
MS.gene56006.t1 AT2G01630 43.158 95 54 0 30 124 23 117 9.09e-20 84.3
MS.gene56006.t1 AT4G26830 34.234 111 73 0 14 124 9 119 9.18e-20 84.3
MS.gene56006.t1 AT5G55180 40.816 98 58 0 27 124 24 121 1.07e-19 84.0
MS.gene56006.t1 AT4G26830 36.735 98 62 0 27 124 26 123 1.11e-19 84.0
MS.gene56006.t1 AT5G55180 40.816 98 58 0 27 124 24 121 1.18e-19 84.0
MS.gene56006.t1 AT2G26600 38.462 104 63 1 31 134 35 137 1.29e-19 83.6
MS.gene56006.t1 AT4G14080 34.694 98 64 0 27 124 39 136 2.81e-19 82.8
MS.gene56006.t1 AT3G13560 42.857 98 56 0 27 124 23 120 1.54e-17 78.2
MS.gene56006.t1 AT3G13560 42.857 98 56 0 27 124 23 120 1.54e-17 78.2
MS.gene56006.t1 AT3G13560 42.857 98 56 0 27 124 23 120 1.54e-17 78.2
MS.gene56006.t1 AT3G13560 42.857 98 56 0 27 124 23 120 1.54e-17 78.2
MS.gene56006.t1 AT3G13560 42.857 98 56 0 27 124 23 120 1.54e-17 78.2
MS.gene56006.t1 AT2G05790 39.796 98 59 0 27 124 22 119 2.48e-17 77.4
MS.gene56006.t1 AT1G32860 39.130 115 69 1 10 124 9 122 1.20e-16 75.5
MS.gene56006.t1 AT5G20390 38.614 101 61 1 27 126 30 130 2.10e-16 74.3
MS.gene56006.t1 AT1G33220 32.773 119 79 1 9 126 13 131 5.47e-16 73.2
MS.gene56006.t1 AT4G18340 34.921 126 75 2 2 124 6 127 5.50e-16 73.6
MS.gene56006.t1 AT3G04010 40.625 96 54 2 30 123 33 127 5.76e-16 73.6
MS.gene56006.t1 AT4G18340 34.921 126 75 2 2 124 6 127 5.99e-16 73.2
MS.gene56006.t1 AT5G20340 37.374 99 61 1 29 126 42 140 6.90e-16 72.8
MS.gene56006.t1 AT5G18220 35.417 96 61 1 28 123 28 122 6.91e-16 73.2
MS.gene56006.t1 AT3G55430 38.095 105 62 3 21 124 20 122 7.73e-16 73.2
MS.gene56006.t1 AT5G20330 37.903 124 67 2 13 126 8 131 8.81e-16 72.4
MS.gene56006.t1 AT3G23770 33.981 103 68 0 22 124 29 131 9.17e-16 72.8
MS.gene56006.t1 AT3G46570 35.965 114 69 4 14 124 10 122 1.13e-15 72.4
MS.gene56006.t1 AT3G15800 41.053 95 55 1 31 124 44 138 2.96e-15 71.2
MS.gene56006.t1 AT1G64760 35.000 120 72 3 9 123 1 119 3.98e-15 71.2
MS.gene56006.t1 AT1G64760 35.000 120 72 3 9 123 1 119 3.98e-15 71.2
MS.gene56006.t1 AT5G58090 36.364 99 61 1 27 123 19 117 6.14e-15 70.5
MS.gene56006.t1 AT1G66250 34.021 97 64 0 28 124 30 126 6.74e-15 70.5
MS.gene56006.t1 AT4G17180 36.508 126 69 4 17 136 8 128 1.13e-14 69.7
MS.gene56006.t1 AT5G24318 37.069 116 68 3 13 124 10 124 1.26e-14 69.3
MS.gene56006.t1 AT1G77780 33.898 118 72 2 12 124 1 117 1.79e-14 68.9
MS.gene56006.t1 AT2G27500 34.653 101 66 0 24 124 23 123 2.29e-14 68.9
MS.gene56006.t1 AT2G19440 36.458 96 58 2 30 123 21 115 2.32e-14 68.9
MS.gene56006.t1 AT2G19440 36.458 96 58 2 30 123 21 115 2.32e-14 68.9
MS.gene56006.t1 AT2G27500 34.653 101 66 0 24 124 23 123 2.56e-14 68.6
MS.gene56006.t1 AT3G24330 29.921 127 84 2 2 123 8 134 2.76e-14 68.6
MS.gene56006.t1 AT5G24318 37.069 116 68 3 13 124 10 124 3.14e-14 68.6
MS.gene56006.t1 AT5G42100 38.889 108 63 2 17 124 16 120 3.14e-14 68.6
MS.gene56006.t1 AT5G24318 37.069 116 68 3 13 124 10 124 3.18e-14 68.6
MS.gene56006.t1 AT5G42100 38.889 108 63 2 17 124 16 120 3.31e-14 68.6
MS.gene56006.t1 AT3G55780 38.384 99 57 1 30 124 31 129 5.36e-14 67.8
MS.gene56006.t1 AT2G39640 35.897 117 66 4 12 124 12 123 1.93e-13 66.2
MS.gene56006.t1 AT1G30080 36.207 116 70 2 12 124 15 129 2.11e-13 66.2
MS.gene56006.t1 AT1G30080 36.207 116 70 2 12 124 15 129 2.38e-13 65.9
MS.gene56006.t1 AT4G31140 31.304 115 77 1 11 123 8 122 3.50e-13 65.5
MS.gene56006.t1 AT1G11820 31.579 95 65 0 30 124 44 138 6.98e-13 64.7
MS.gene56006.t1 AT1G11820 31.579 95 65 0 30 124 44 138 7.17e-13 64.7
MS.gene56006.t1 AT1G11820 31.579 95 65 0 30 124 44 138 9.00e-13 64.3
MS.gene56006.t1 AT5G64790 32.479 117 77 1 21 135 19 135 9.39e-13 64.3
MS.gene56006.t1 AT5G58480 30.693 101 67 1 26 123 22 122 1.84e-11 60.5
MS.gene56006.t1 AT3G61810 30.000 110 77 0 16 125 41 150 4.22e-11 59.3
MS.gene56006.t1 AT5G20870 28.000 125 87 2 2 123 1 125 7.76e-11 58.9

Find 25 sgRNAs with CRISPR-Local

Find 329 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATCATATAGCCTCATTCTT+TGG 0.245537 2.3:-56371436 None:intergenic
GCTACTATTTGCACTGTTTA+CGG 0.255788 2.3:+56366329 MS.gene56006:CDS
TCACAAGCAGGTGCTCAAAT+AGG 0.357040 2.3:+56371338 MS.gene56006:intron
AATTGAGAATTGCCACCAAC+TGG 0.394770 2.3:-56371644 None:intergenic
ACAAAGACATTGCAAATCAA+TGG 0.408391 2.3:+56371549 MS.gene56006:CDS
TTGATTTGCAATGTCTTTGT+TGG 0.409434 2.3:-56371546 None:intergenic
GCTTCAAGAGCATCTTGGTT+TGG 0.411205 2.3:-56371458 None:intergenic
GCTCAAATAGGTGTTTGTTA+TGG 0.437286 2.3:+56371350 MS.gene56006:CDS
TTCACGTTGTGATGGTAGAT+TGG 0.447086 2.3:-56371384 None:intergenic
TAGCAGGAGAGAAGCCATTA+CGG 0.465394 2.3:-56366310 None:intergenic
CAAAGACATTGCAAATCAAT+GGG 0.489896 2.3:+56371550 MS.gene56006:CDS
TCTGGCATAGAGCTTATGTT+AGG 0.490580 2.3:+56371491 MS.gene56006:CDS
CTTGAAGCACTTAGAAACTC+TGG 0.524132 2.3:+56371473 MS.gene56006:CDS
AATAGGTGTTTGTTATGGCA+TGG 0.529222 2.3:+56371355 MS.gene56006:CDS
TTCTTTCCTAGCATGATCAC+AGG 0.533324 2.3:+56366279 None:intergenic
TAAGTGCTTCAAGAGCATCT+TGG 0.536197 2.3:-56371463 None:intergenic
GGTGTTTGTTATGGCATGGA+AGG 0.540427 2.3:+56371359 MS.gene56006:CDS
CACAGGCAACAGTACCGTAA+TGG 0.550356 2.3:+56366296 MS.gene56006:CDS
AACGAAGTTAATCCAGTTGG+TGG 0.557119 2.3:+56371632 MS.gene56006:CDS
CAAACAACATCCAAAGAATG+AGG 0.557727 2.3:+56371426 MS.gene56006:CDS
TAAACAGTGCAAATAGTAGC+AGG 0.561781 2.3:-56366326 None:intergenic
TCTATTGCTTCACGTTGTGA+TGG 0.567520 2.3:-56371392 None:intergenic
AAAATCAAATACATCGCGGT+CGG 0.638139 2.3:+56371608 MS.gene56006:CDS
GGTAACGAAGTTAATCCAGT+TGG 0.642015 2.3:+56371629 MS.gene56006:CDS
TGTCAAAATCAAATACATCG+CGG 0.787139 2.3:+56371604 MS.gene56006:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATTAAAATGAAATACT+TGG + chr2.3:56369780-56369799 MS.gene56006:intron 10.0%
!! AACTTATTAGAAATTAATTT+AGG - chr2.3:56370628-56370647 None:intergenic 10.0%
!! ACTTATTAGAAATTAATTTA+GGG - chr2.3:56370627-56370646 None:intergenic 10.0%
!! TTAATATAATTAGATTTGAA+GGG + chr2.3:56370439-56370458 MS.gene56006:intron 10.0%
!! TTTAATATAATTAGATTTGA+AGG + chr2.3:56370438-56370457 MS.gene56006:intron 10.0%
!!! ATTTAATACTATTCATTTTA+AGG - chr2.3:56367391-56367410 None:intergenic 10.0%
!!! TTTATTTTATATCTTATCAT+TGG + chr2.3:56368866-56368885 MS.gene56006:intron 10.0%
!!! TTTCATTTTAATTTTTATGA+AGG - chr2.3:56369776-56369795 None:intergenic 10.0%
!! AAATTCTTCATTAAATTTGT+CGG - chr2.3:56367832-56367851 None:intergenic 15.0%
!! GCTTATTAGAAATTAATTTA+GGG - chr2.3:56370675-56370694 None:intergenic 15.0%
!! TATTAGAAAATATTGAGTAA+AGG - chr2.3:56368412-56368431 None:intergenic 15.0%
!! TGCTTATTAGAAATTAATTT+AGG - chr2.3:56370676-56370695 None:intergenic 15.0%
!!! AATTTTAGTCTCTAATATTT+TGG - chr2.3:56368942-56368961 None:intergenic 15.0%
!!! CATATACAATCTTTTAATAA+AGG + chr2.3:56368807-56368826 MS.gene56006:intron 15.0%
!!! TATATTATATATAGGCTTTT+TGG - chr2.3:56369621-56369640 None:intergenic 15.0%
!!! TTTTCATAATTAAGTGATAT+CGG + chr2.3:56369118-56369137 MS.gene56006:intron 15.0%
!!! TTTTTTTGATTTTTACAGTT+TGG - chr2.3:56368750-56368769 None:intergenic 15.0%
!! AAAATAAATAGACAATGTTG+CGG - chr2.3:56368385-56368404 None:intergenic 20.0%
!! ACATAATTGAGTGTAATTAT+AGG - chr2.3:56370139-56370158 None:intergenic 20.0%
!! AGTAAATAAGAAAATTAGCT+AGG - chr2.3:56366394-56366413 None:intergenic 20.0%
!! ATCAAATATAGATAGAACAA+AGG + chr2.3:56370006-56370025 MS.gene56006:intron 20.0%
!! ATGAACTAATGTCTTTATTA+TGG - chr2.3:56369000-56369019 None:intergenic 20.0%
!! CAACAATGAAAACAAAAAAA+AGG - chr2.3:56367503-56367522 None:intergenic 20.0%
!! TATACTTCTATGAGAATAAT+TGG - chr2.3:56369872-56369891 None:intergenic 20.0%
!! TGAAAACAAAAAAAAGGAAA+CGG - chr2.3:56367497-56367516 None:intergenic 20.0%
!! TGGCATAAAAATTACATATT+TGG - chr2.3:56371210-56371229 None:intergenic 20.0%
!! TTGAAACAACATTGTATATA+TGG + chr2.3:56369216-56369235 MS.gene56006:intron 20.0%
!!! AACTTAGTTGTTTTTTCTTT+TGG - chr2.3:56368620-56368639 None:intergenic 20.0%
!!! AATGTTGTTTCAAAAAAACT+AGG - chr2.3:56369209-56369228 None:intergenic 20.0%
!!! ACATTAGTTCATTTTAATGT+CGG + chr2.3:56369008-56369027 MS.gene56006:intron 20.0%
!!! ATATATATAAAAAGAGTGTG+TGG - chr2.3:56366885-56366904 None:intergenic 20.0%
!!! ATATGTGATTTAAGATATGA+AGG - chr2.3:56369811-56369830 None:intergenic 20.0%
!!! ATCTATACCTTTTTTTTTGT+AGG + chr2.3:56367461-56367480 MS.gene56006:intron 20.0%
!!! TAACTATCCAAATATTTCTA+TGG + chr2.3:56367712-56367731 MS.gene56006:intron 20.0%
!!! TCTATACCTTTTTTTTTGTA+GGG + chr2.3:56367462-56367481 MS.gene56006:intron 20.0%
!!! TTATTTGGTGTAATTTGTAT+AGG - chr2.3:56369383-56369402 None:intergenic 20.0%
!!! TTCTCATAGAAGTATAAATA+TGG + chr2.3:56369876-56369895 MS.gene56006:intron 20.0%
!!! TTTTTAGATTGTAATTGTCA+CGG - chr2.3:56370052-56370071 None:intergenic 20.0%
! AAATCACATATTTAGTACAC+TGG + chr2.3:56369820-56369839 MS.gene56006:intron 25.0%
! AATGAGTAGTGTAACTAAAA+GGG - chr2.3:56368318-56368337 None:intergenic 25.0%
! AATTTCCAACATAAATCTAG+TGG + chr2.3:56367798-56367817 MS.gene56006:intron 25.0%
! AGAAATAGATGATGTTGAAT+TGG + chr2.3:56366571-56366590 MS.gene56006:intron 25.0%
! AGAATAATTGGACAAATATG+GGG - chr2.3:56369860-56369879 None:intergenic 25.0%
! AGATTTCCCTACAAAAAAAA+AGG - chr2.3:56367471-56367490 None:intergenic 25.0%
! AGTTTATAGAATCAACGAAA+GGG + chr2.3:56370695-56370714 MS.gene56006:intron 25.0%
! ATGTTGGAAAGAAAGAAAAA+AGG + chr2.3:56370355-56370374 MS.gene56006:intron 25.0%
! ATTTACAGGATACATTAGTT+TGG + chr2.3:56367541-56367560 MS.gene56006:intron 25.0%
! CCAAACTTTCTCTTATAAAT+AGG + chr2.3:56366508-56366527 MS.gene56006:intron 25.0%
! CCTATTTATAAGAGAAAGTT+TGG - chr2.3:56366445-56366426 None:intergenic 25.0%
! CTATCTATATTTGATTCTCT+TGG - chr2.3:56370001-56370020 None:intergenic 25.0%
! CTCAACTTTCTCTTATAAAT+AGG - chr2.3:56366429-56366448 None:intergenic 25.0%
! GAATACAATACAACAAATCA+TGG + chr2.3:56369474-56369493 MS.gene56006:intron 25.0%
! GAGAATAATTGGACAAATAT+GGG - chr2.3:56369861-56369880 None:intergenic 25.0%
! GATACAATTGAAGTATAAAG+TGG + chr2.3:56369912-56369931 MS.gene56006:intron 25.0%
! GTTTGAAAGTTATATGTACT+AGG - chr2.3:56369413-56369432 None:intergenic 25.0%
! TAAATAGAAGATCGACAATT+AGG - chr2.3:56367261-56367280 None:intergenic 25.0%
! TAAGTTCAAAAATGTTGTAG+TGG - chr2.3:56367953-56367972 None:intergenic 25.0%
! TAGAAACCAACATATGTATA+AGG - chr2.3:56369676-56369695 None:intergenic 25.0%
! TATGCTTCATAGATTACTAA+GGG - chr2.3:56370302-56370321 None:intergenic 25.0%
! TGAGAATAATTGGACAAATA+TGG - chr2.3:56369862-56369881 None:intergenic 25.0%
! TGTCCTGTTTAAAGAAAAAA+AGG - chr2.3:56371113-56371132 None:intergenic 25.0%
! TTATGTTGGAAATTAAGAAG+TGG - chr2.3:56367792-56367811 None:intergenic 25.0%
! TTGTTGTAATCTATGAAACA+CGG - chr2.3:56370217-56370236 None:intergenic 25.0%
!! ACTACAACATTTTTGAACTT+AGG + chr2.3:56367952-56367971 MS.gene56006:intron 25.0%
!! AGAAGTATATGGCTAAAATT+TGG + chr2.3:56369966-56369985 MS.gene56006:intron 25.0%
!! GATTCATAGTTTCAAACTTT+TGG - chr2.3:56366735-56366754 None:intergenic 25.0%
!! GTAATACTTGTTTCATGTTT+TGG - chr2.3:56368683-56368702 None:intergenic 25.0%
!!! ACACCTTTTTTTCTTTAAAC+AGG + chr2.3:56371107-56371126 MS.gene56006:intron 25.0%
!!! ATATATAGGCTTTTTGGTAA+TGG - chr2.3:56369615-56369634 None:intergenic 25.0%
!!! ATGTATTTGATTTTGACACT+AGG - chr2.3:56371602-56371621 None:intergenic 25.0%
!!! TCAAGGCTTTAAAAATTTAC+AGG + chr2.3:56367527-56367546 MS.gene56006:intron 25.0%
!!! TGTATTTGATTTTGACACTA+GGG - chr2.3:56371601-56371620 None:intergenic 25.0%
AAGGTATAGATATAGTCACA+CGG - chr2.3:56367452-56367471 None:intergenic 30.0%
AATGAAGTTTAGCAACATTG+TGG + chr2.3:56366673-56366692 MS.gene56006:intron 30.0%
AATGTGCCTTATACATATGT+TGG + chr2.3:56369667-56369686 MS.gene56006:intron 30.0%
AATTAGGCATGTAGATGTTA+TGG - chr2.3:56367245-56367264 None:intergenic 30.0%
ACAAAGACATTGCAAATCAA+TGG + chr2.3:56371549-56371568 MS.gene56006:CDS 30.0%
ACAAATCCTAAAACAAGTAG+CGG - chr2.3:56371070-56371089 None:intergenic 30.0%
ACAATGTTGCTAAACTTCAT+TGG - chr2.3:56366674-56366693 None:intergenic 30.0%
ACACATGAATAAAAGACAAG+CGG + chr2.3:56366915-56366934 MS.gene56006:intron 30.0%
ACTATCCACTAGATTTATGT+TGG - chr2.3:56367806-56367825 None:intergenic 30.0%
ATACCACACTTGAAAAATAG+TGG - chr2.3:56368043-56368062 None:intergenic 30.0%
ATATGTATAAGGCACATTGT+GGG - chr2.3:56369665-56369684 None:intergenic 30.0%
ATGAAGTTTAGCAACATTGT+GGG + chr2.3:56366674-56366693 MS.gene56006:intron 30.0%
ATTGTCGATCTTCTATTTAG+TGG + chr2.3:56367262-56367281 MS.gene56006:intron 30.0%
ATTTAAGAAAGCCAGTTTCA+TGG + chr2.3:56370472-56370491 MS.gene56006:intron 30.0%
CAAAGACATTGCAAATCAAT+GGG + chr2.3:56371550-56371569 MS.gene56006:CDS 30.0%
CAGTTTATAGAATCAACGAA+AGG + chr2.3:56370694-56370713 MS.gene56006:intron 30.0%
CTATGCTTCATAGATTACTA+AGG - chr2.3:56370303-56370322 None:intergenic 30.0%
CTTTCTCTTATAAATAGGAC+CGG + chr2.3:56366513-56366532 MS.gene56006:intron 30.0%
CTTTCTCTTATAAATAGGAC+CGG - chr2.3:56366532-56366513 None:intergenic 30.0%
GAATGAGTAGTGTAACTAAA+AGG - chr2.3:56368319-56368338 None:intergenic 30.0%
TAATCTATGAAACACGGATA+CGG - chr2.3:56370211-56370230 None:intergenic 30.0%
TAATCTATGAAGCATAGACA+CGG + chr2.3:56370306-56370325 MS.gene56006:intron 30.0%
TATTATTCATGGCTAATGTG+TGG + chr2.3:56371137-56371156 MS.gene56006:intron 30.0%
TCTTTGTAGTAGCCTTTATT+TGG - chr2.3:56369159-56369178 None:intergenic 30.0%
TGGTTTCACAATAAACATAG+TGG + chr2.3:56368578-56368597 MS.gene56006:intron 30.0%
TGTCAAAATCAAATACATCG+CGG + chr2.3:56371604-56371623 MS.gene56006:CDS 30.0%
TTAAGGATGTCCTTATCAAA+CGG - chr2.3:56367336-56367355 None:intergenic 30.0%
TTATGGCTTAGTTTAAACCA+CGG + chr2.3:56368159-56368178 MS.gene56006:intron 30.0%
TTATTGTTTAATACTCCCTC+CGG - chr2.3:56366535-56366554 None:intergenic 30.0%
TTGTCGATCTTCTATTTAGT+GGG + chr2.3:56367263-56367282 MS.gene56006:intron 30.0%
TTTATTGTGAAACCATGAAC+TGG - chr2.3:56368573-56368592 None:intergenic 30.0%
! AGATAGAACAAAGGAGTATA+CGG + chr2.3:56370015-56370034 MS.gene56006:intron 30.0%
! CATATAATGTTTTCACAAGC+AGG + chr2.3:56371326-56371345 MS.gene56006:intron 30.0%
! GATTTGTGGGAAAGATTTTA+GGG + chr2.3:56371083-56371102 MS.gene56006:intron 30.0%
! GGTTTCTAAAAAAATCACGT+TGG + chr2.3:56369688-56369707 MS.gene56006:intron 30.0%
! TATTGAAGTACTTTAAGCCA+CGG - chr2.3:56368129-56368148 None:intergenic 30.0%
! TCCAAATATTTCTATGGCAT+AGG + chr2.3:56367718-56367737 MS.gene56006:intron 30.0%
! TCTTTTTGACATGTTCTCAA+TGG + chr2.3:56367419-56367438 MS.gene56006:intron 30.0%
! TGGCTTAAAGTACTTCAATA+GGG + chr2.3:56368129-56368148 MS.gene56006:intron 30.0%
! TTAGTTTAAACCACGGATTT+TGG + chr2.3:56368166-56368185 MS.gene56006:intron 30.0%
! TTTGATGTACTAGTTTGTAC+TGG - chr2.3:56369938-56369957 None:intergenic 30.0%
! TTTTTCTCATTCCATGAAAC+TGG - chr2.3:56370486-56370505 None:intergenic 30.0%
!! AAAAGCACTCAAGAAGTATA+TGG + chr2.3:56369955-56369974 MS.gene56006:intron 30.0%
!! AAACTGGCTTTCTTAAATTG+AGG - chr2.3:56370470-56370489 None:intergenic 30.0%
!! CTAGGTCGTATTTTACTTTT+TGG - chr2.3:56368650-56368669 None:intergenic 30.0%
!! GATTTAATGGCTTTAGTTCT+AGG + chr2.3:56368287-56368306 MS.gene56006:intron 30.0%
!! TCATTTGCTTTTGACACTTT+TGG - chr2.3:56367085-56367104 None:intergenic 30.0%
!! TTGATTTGCAATGTCTTTGT+TGG - chr2.3:56371549-56371568 None:intergenic 30.0%
!!! CTACTTGTTTTAGGATTTGT+GGG + chr2.3:56371070-56371089 MS.gene56006:intron 30.0%
!!! TAGCAATGTTTTGAAGATCT+GGG - chr2.3:56371526-56371545 None:intergenic 30.0%
AAAAAAGGGTGGCTTATAAC+AGG - chr2.3:56371257-56371276 None:intergenic 35.0%
AAAAATGTGGCCTAATGTTC+AGG - chr2.3:56368215-56368234 None:intergenic 35.0%
AAAATCAAATACATCGCGGT+CGG + chr2.3:56371608-56371627 MS.gene56006:CDS 35.0%
AAAGCAACATTCATGAACCT+AGG + chr2.3:56366989-56367008 MS.gene56006:intron 35.0%
AAATCAAATGCCAAAATCCG+TGG - chr2.3:56368179-56368198 None:intergenic 35.0%
ACAACAATGTTATCTCTCCT+AGG - chr2.3:56367009-56367028 None:intergenic 35.0%
ACCTTCTACATAGAGTACAA+AGG - chr2.3:56367039-56367058 None:intergenic 35.0%
ACTCACATAGTAGATACACA+GGG + chr2.3:56369271-56369290 MS.gene56006:intron 35.0%
ATCCACAAAAAACCAGTTCA+TGG + chr2.3:56368558-56368577 MS.gene56006:intron 35.0%
CAAACAACATCCAAAGAATG+AGG + chr2.3:56371426-56371445 MS.gene56006:CDS 35.0%
CAAATCCTAAAACAAGTAGC+GGG - chr2.3:56371069-56371088 None:intergenic 35.0%
CACGGATACTAAAATTTCGT+GGG - chr2.3:56368111-56368130 None:intergenic 35.0%
CAGATAAAAAACAGTAGCCA+CGG - chr2.3:56368242-56368261 None:intergenic 35.0%
CAGGACACAGTTATTATTCA+TGG + chr2.3:56371126-56371145 MS.gene56006:intron 35.0%
CATATGTATAAGGCACATTG+TGG - chr2.3:56369666-56369685 None:intergenic 35.0%
CCAATGATCCTTCCAAATAA+AGG + chr2.3:56369144-56369163 MS.gene56006:intron 35.0%
CCTTCTACATAGAGTACAAA+GGG - chr2.3:56367038-56367057 None:intergenic 35.0%
CGATTCTAATATGGACATGT+TGG + chr2.3:56370339-56370358 MS.gene56006:intron 35.0%
CTTAAGTAGACATATTGCAC+AGG + chr2.3:56366647-56366666 MS.gene56006:intron 35.0%
CTTATAACAGGAATAAGCCA+TGG - chr2.3:56371245-56371264 None:intergenic 35.0%
CTTTATTATGGTCTTTGACG+CGG - chr2.3:56368988-56369007 None:intergenic 35.0%
GACATTAACATGTTGAGACT+AGG + chr2.3:56369443-56369462 MS.gene56006:intron 35.0%
GATCATATAGCCTCATTCTT+TGG - chr2.3:56371439-56371458 None:intergenic 35.0%
GCCTATGCCATAGAAATATT+TGG - chr2.3:56367722-56367741 None:intergenic 35.0%
GCTACTATTTGCACTGTTTA+CGG + chr2.3:56366329-56366348 MS.gene56006:CDS 35.0%
GTACTAGGTGTTCGTTTATT+TGG - chr2.3:56369398-56369417 None:intergenic 35.0%
GTATAGCATGCACTTTGTTA+AGG - chr2.3:56367353-56367372 None:intergenic 35.0%
GTGCATGCTATACTTTAATC+AGG + chr2.3:56367360-56367379 MS.gene56006:intron 35.0%
TAAACAGTGCAAATAGTAGC+AGG - chr2.3:56366329-56366348 None:intergenic 35.0%
TAAGGATGTCCTTATCAAAC+GGG - chr2.3:56367335-56367354 None:intergenic 35.0%
TACTCACATAGTAGATACAC+AGG + chr2.3:56369270-56369289 MS.gene56006:intron 35.0%
TCACATATTTAGTACACTGG+TGG + chr2.3:56369823-56369842 MS.gene56006:intron 35.0%
TGGTATCTAAGAGATAGTTG+AGG + chr2.3:56369494-56369513 MS.gene56006:intron 35.0%
TGTCATCTAAAAAAGTCTCG+TGG - chr2.3:56366954-56366973 None:intergenic 35.0%
TTGTTTCAGTTGTGTTCTTG+TGG - chr2.3:56369056-56369075 None:intergenic 35.0%
TTTATTATGGTCTTTGACGC+GGG - chr2.3:56368987-56369006 None:intergenic 35.0%
TTTCACCACTTATGGGATTA+GGG - chr2.3:56367207-56367226 None:intergenic 35.0%
! CCTTTATTTGGAAGGATCAT+TGG - chr2.3:56369147-56369166 None:intergenic 35.0%
! GAGAGTCAGAATGGATTTAA+TGG + chr2.3:56368274-56368293 MS.gene56006:intron 35.0%
! GCTCAAATAGGTGTTTGTTA+TGG + chr2.3:56371350-56371369 MS.gene56006:CDS 35.0%
! GGATTTGTGGGAAAGATTTT+AGG + chr2.3:56371082-56371101 MS.gene56006:intron 35.0%
! GTGGCTTAAAGTACTTCAAT+AGG + chr2.3:56368128-56368147 MS.gene56006:intron 35.0%
! GTTTTCATTGTTGAGTCTCA+AGG + chr2.3:56367510-56367529 MS.gene56006:intron 35.0%
! TAAAGTACTTCAATAGGGCA+CGG + chr2.3:56368134-56368153 MS.gene56006:intron 35.0%
! TAATAGAGCACGGTTTTTGT+TGG + chr2.3:56371169-56371188 MS.gene56006:intron 35.0%
! TGTAGTAGCCTTTATTTGGA+AGG - chr2.3:56369155-56369174 None:intergenic 35.0%
! TTCTTATTTACTACTCCCTC+CGG + chr2.3:56366402-56366421 MS.gene56006:intron 35.0%
! TTTGGCATTTGATTTAGGCT+AGG + chr2.3:56368184-56368203 MS.gene56006:intron 35.0%
!! AATAGGTGTTTGTTATGGCA+TGG + chr2.3:56371355-56371374 MS.gene56006:CDS 35.0%
!! CGGATTTTGGCATTTGATTT+AGG + chr2.3:56368179-56368198 MS.gene56006:intron 35.0%
!! GGGATTTTGATAGAAACACT+AGG - chr2.3:56370607-56370626 None:intergenic 35.0%
!! GTAATTATAGGTGTCGATGT+CGG - chr2.3:56370127-56370146 None:intergenic 35.0%
!! TATTTAGTGGGTTAGTCAGA+AGG + chr2.3:56367275-56367294 MS.gene56006:intron 35.0%
!!! AACCATGAACTGGTTTTTTG+TGG - chr2.3:56368563-56368582 None:intergenic 35.0%
!!! ACTTTTGGCTTTCTAACACT+TGG - chr2.3:56367070-56367089 None:intergenic 35.0%
!!! ATGTTTTGAAGATCTGGGTT+AGG - chr2.3:56371521-56371540 None:intergenic 35.0%
!!! CTTTTGGCTTTCTAACACTT+GGG - chr2.3:56367069-56367088 None:intergenic 35.0%
!!! GCTACTTGTTTTAGGATTTG+TGG + chr2.3:56371069-56371088 MS.gene56006:intron 35.0%
!!! GTAGCAATGTTTTGAAGATC+TGG - chr2.3:56371527-56371546 None:intergenic 35.0%
!!! TGTTTTGGAAATGCAAGACT+AGG - chr2.3:56368668-56368687 None:intergenic 35.0%
!!! TTTTGGCTTTCTAACACTTG+GGG - chr2.3:56367068-56367087 None:intergenic 35.0%
AAAGGGTTTGAGGGAAAGAA+AGG + chr2.3:56370867-56370886 MS.gene56006:intron 40.0%
AACGAAGTTAATCCAGTTGG+TGG + chr2.3:56371632-56371651 MS.gene56006:CDS 40.0%
AAGGGTTATAGGAGAGAGAA+AGG + chr2.3:56370924-56370943 MS.gene56006:intron 40.0%
AAGGGTTTGAGGGAAAGAAA+GGG + chr2.3:56370868-56370887 MS.gene56006:intron 40.0%
AATTGAGAATTGCCACCAAC+TGG - chr2.3:56371647-56371666 None:intergenic 40.0%
ACACATAAAAACACTCCGGT+GGG - chr2.3:56367744-56367763 None:intergenic 40.0%
ACACATCGTAGCAACAACTT+AGG - chr2.3:56369567-56369586 None:intergenic 40.0%
ACATCGTAGCAACAACTTAG+GGG - chr2.3:56369565-56369584 None:intergenic 40.0%
ACTTGCCCACAGCAAAAAAA+GGG - chr2.3:56371271-56371290 None:intergenic 40.0%
AGGGTTATAGGAGAGAGAAA+GGG + chr2.3:56370925-56370944 MS.gene56006:intron 40.0%
AGTAAAAAATCCGTGGCCAT+AGG - chr2.3:56368085-56368104 None:intergenic 40.0%
AGTAACTCCCACTTTCTTTG+TGG - chr2.3:56369254-56369273 None:intergenic 40.0%
ATACTCATGCCCGTTTGATA+AGG + chr2.3:56367323-56367342 MS.gene56006:intron 40.0%
ATGTTATGGTGTACCTGATC+GGG - chr2.3:56367231-56367250 None:intergenic 40.0%
CACATCGTAGCAACAACTTA+GGG - chr2.3:56369566-56369585 None:intergenic 40.0%
CCAAATCTTGAGAGTCAGAA+TGG + chr2.3:56368265-56368284 MS.gene56006:intron 40.0%
CCACGGATACTAAAATTTCG+TGG - chr2.3:56368112-56368131 None:intergenic 40.0%
CCATTCTGACTCTCAAGATT+TGG - chr2.3:56368268-56368287 None:intergenic 40.0%
CCCTTTGTACTCTATGTAGA+AGG + chr2.3:56367035-56367054 MS.gene56006:intron 40.0%
CTCTTATAAATAGGACCGGA+GGG + chr2.3:56366517-56366536 MS.gene56006:intron 40.0%
CTCTTATAAATAGGACCGGA+GGG - chr2.3:56366536-56366517 None:intergenic 40.0%
GAAGAACAGAGAGAAGCTTA+CGG + chr2.3:56370721-56370740 MS.gene56006:intron 40.0%
GATGTTATGGTGTACCTGAT+CGG - chr2.3:56367232-56367251 None:intergenic 40.0%
GGTAACGAAGTTAATCCAGT+TGG + chr2.3:56371629-56371648 MS.gene56006:CDS 40.0%
GTAAAAAATCCGTGGCCATA+GGG - chr2.3:56368084-56368103 None:intergenic 40.0%
GTAACTCCCACTTTCTTTGT+GGG - chr2.3:56369253-56369272 None:intergenic 40.0%
GTCCATATTAGAATCGTGTC+CGG - chr2.3:56370335-56370354 None:intergenic 40.0%
GTTTCACCACTTATGGGATT+AGG - chr2.3:56367208-56367227 None:intergenic 40.0%
TAGCCACGGTCATAAAAATG+TGG - chr2.3:56368228-56368247 None:intergenic 40.0%
TCTATTGCTTCACGTTGTGA+TGG - chr2.3:56371395-56371414 None:intergenic 40.0%
TCTCTTATAAATAGGACCGG+AGG + chr2.3:56366516-56366535 MS.gene56006:intron 40.0%
TCTCTTATAAATAGGACCGG+AGG - chr2.3:56366535-56366516 None:intergenic 40.0%
TCTGGCATAGAGCTTATGTT+AGG + chr2.3:56371491-56371510 MS.gene56006:CDS 40.0%
TGCCACACATAAAAACACTC+CGG - chr2.3:56367748-56367767 None:intergenic 40.0%
TGCCACACTACAAAAATCCA+TGG + chr2.3:56371225-56371244 MS.gene56006:intron 40.0%
TGGGCATAGTAAAAAATCCG+TGG - chr2.3:56368092-56368111 None:intergenic 40.0%
TTCACCACTTATGGGATTAG+GGG - chr2.3:56367206-56367225 None:intergenic 40.0%
TTCACGTTGTGATGGTAGAT+TGG - chr2.3:56371387-56371406 None:intergenic 40.0%
! AGAGTTGTGATGGAGAGAAA+GGG + chr2.3:56370850-56370869 MS.gene56006:intron 40.0%
! AGCCATGGATTTTTGTAGTG+TGG - chr2.3:56371230-56371249 None:intergenic 40.0%
! ATTAGGGGTCAGAGCTTTTA+CGG - chr2.3:56367191-56367210 None:intergenic 40.0%
! CTTGAAGCACTTAGAAACTC+TGG + chr2.3:56371473-56371492 MS.gene56006:CDS 40.0%
! TAAAAAGCACGAACACTCCT+CGG + chr2.3:56370066-56370085 MS.gene56006:intron 40.0%
! TGAGCGATGCTCTTTCTTTT+AGG + chr2.3:56368359-56368378 MS.gene56006:intron 40.0%
! TGAGCGGGTCTTTCAATTTT+GGG - chr2.3:56371035-56371054 None:intergenic 40.0%
! TGTTGCTGTGTTGTTAGGTT+AGG - chr2.3:56369338-56369357 None:intergenic 40.0%
! TTCAATAGGGCACGGTTTTA+TGG + chr2.3:56368142-56368161 MS.gene56006:intron 40.0%
! TTTGCGTGACACGTCTTTTA+AGG + chr2.3:56367153-56367172 MS.gene56006:intron 40.0%
!! CCACGAAATTTTAGTATCCG+TGG + chr2.3:56368109-56368128 MS.gene56006:intron 40.0%
!! GTGTTTTTATGTGTGGCAAC+TGG + chr2.3:56367750-56367769 MS.gene56006:intron 40.0%
!! TAAGTGCTTCAAGAGCATCT+TGG - chr2.3:56371466-56371485 None:intergenic 40.0%
!! TCATTCCCGCTACTTGTTTT+AGG + chr2.3:56371061-56371080 MS.gene56006:intron 40.0%
!! TTAGGTTGGCAGGTTATTTC+TGG - chr2.3:56369320-56369339 None:intergenic 40.0%
!!! TGGCCACTATTTTTCAAGTG+TGG + chr2.3:56368037-56368056 MS.gene56006:intron 40.0%
!!! TGGCTACGATTTTTGAAGTC+TGG - chr2.3:56367978-56367997 None:intergenic 40.0%
AAAAGACGTGTCACGCAAAG+TGG - chr2.3:56367152-56367171 None:intergenic 45.0%
ACCGTGCTCTATTACATCAC+TGG - chr2.3:56371163-56371182 None:intergenic 45.0%
ACTCGAAGATGATCTTCGAG+AGG - chr2.3:56368727-56368746 None:intergenic 45.0%
AGCCAAAGCCATAAAATCCG+TGG + chr2.3:56367993-56368012 MS.gene56006:intron 45.0%
ATCACAACTCTCTCTGTAGC+CGG - chr2.3:56370841-56370860 None:intergenic 45.0%
ATCGGGGTTTCACCACTTAT+GGG - chr2.3:56367214-56367233 None:intergenic 45.0%
CACACATAAAAACACTCCGG+TGG - chr2.3:56367745-56367764 None:intergenic 45.0%
CACCGGACACGATTCTAATA+TGG + chr2.3:56370330-56370349 MS.gene56006:intron 45.0%
CAGTTGTGTTCTTGTGGCTT+TGG - chr2.3:56369050-56369069 None:intergenic 45.0%
CATCGTAGCAACAACTTAGG+GGG - chr2.3:56369564-56369583 None:intergenic 45.0%
CCTAACAACACAGCAACAAC+AGG + chr2.3:56369340-56369359 MS.gene56006:intron 45.0%
CGATGGAGAGAAAGGGTTAT+AGG + chr2.3:56370913-56370932 MS.gene56006:intron 45.0%
CGGGAATGAAAAAACTGAGC+GGG - chr2.3:56371050-56371069 None:intergenic 45.0%
GACTTGCCCACAGCAAAAAA+AGG - chr2.3:56371272-56371291 None:intergenic 45.0%
GATGGAGAGAAAGGGTTTGA+GGG + chr2.3:56370858-56370877 MS.gene56006:intron 45.0%
GCCAGTGATGTAATAGAGCA+CGG + chr2.3:56371159-56371178 MS.gene56006:intron 45.0%
GCGGGAATGAAAAAACTGAG+CGG - chr2.3:56371051-56371070 None:intergenic 45.0%
GGACAAATATGGGGACTGTT+TGG - chr2.3:56369851-56369870 None:intergenic 45.0%
GGCATGAGTATCAGTGAAGA+AGG - chr2.3:56367314-56367333 None:intergenic 45.0%
GGGTTATAGGAGAGAGAAAG+GGG + chr2.3:56370926-56370945 MS.gene56006:intron 45.0%
TAGCAGGAGAGAAGCCATTA+CGG - chr2.3:56366313-56366332 None:intergenic 45.0%
TCACAAGCAGGTGCTCAAAT+AGG + chr2.3:56371338-56371357 MS.gene56006:intron 45.0%
TGAGGGAAAGAAAGGGTTGT+CGG + chr2.3:56370875-56370894 MS.gene56006:intron 45.0%
TGATGGAGAGAAAGGGTTTG+AGG + chr2.3:56370857-56370876 MS.gene56006:intron 45.0%
TGTTATGGTGTACCTGATCG+GGG - chr2.3:56367230-56367249 None:intergenic 45.0%
TTCGAGAGGAATGAAGCTAG+TGG - chr2.3:56368713-56368732 None:intergenic 45.0%
TTTATGTGTGGCAACTGGCA+TGG + chr2.3:56367755-56367774 MS.gene56006:intron 45.0%
TTTGGCAAAGAACTGCAGGT+TGG + chr2.3:56370797-56370816 MS.gene56006:intron 45.0%
! AGGCCACATTTTTATGACCG+TGG + chr2.3:56368222-56368241 MS.gene56006:intron 45.0%
! CCTGTTGTTGCTGTGTTGTT+AGG - chr2.3:56369343-56369362 None:intergenic 45.0%
! CTAGGTGTCACCTGAACATT+AGG + chr2.3:56368202-56368221 MS.gene56006:intron 45.0%
! CTGAGCGGGTCTTTCAATTT+TGG - chr2.3:56371036-56371055 None:intergenic 45.0%
! GAGAGTTGTGATGGAGAGAA+AGG + chr2.3:56370849-56370868 MS.gene56006:intron 45.0%
! GCTGTGTTGTTAGGTTAGGT+TGG - chr2.3:56369334-56369353 None:intergenic 45.0%
! TACAGAGAGAGCTGCGATTT+TGG + chr2.3:56370772-56370791 MS.gene56006:intron 45.0%
!! AGGTTATTTCTGGTGGGTTG+GGG - chr2.3:56369310-56369329 None:intergenic 45.0%
!! CACCGGAGTGTTTTTATGTG+TGG + chr2.3:56367743-56367762 MS.gene56006:intron 45.0%
!! CAGGTTATTTCTGGTGGGTT+GGG - chr2.3:56369311-56369330 None:intergenic 45.0%
!! GCTTCAAGAGCATCTTGGTT+TGG - chr2.3:56371461-56371480 None:intergenic 45.0%
!! GGTGTTTGTTATGGCATGGA+AGG + chr2.3:56371359-56371378 MS.gene56006:CDS 45.0%
!! GTTGGCAGGTTATTTCTGGT+GGG - chr2.3:56369316-56369335 None:intergenic 45.0%
!! TAGCAACATTGTGGGCTAGT+TGG + chr2.3:56366682-56366701 MS.gene56006:intron 45.0%
!! TGTTGTTAGGTTAGGTTGGC+AGG - chr2.3:56369330-56369349 None:intergenic 45.0%
!!! AAGCCACCCTTTTTTTGCTG+TGG + chr2.3:56371262-56371281 MS.gene56006:intron 45.0%
!!! AGAGCTGCGATTTTGGAGTT+TGG + chr2.3:56370779-56370798 MS.gene56006:intron 45.0%
!!! AGCCACCCTTTTTTTGCTGT+GGG + chr2.3:56371263-56371282 MS.gene56006:intron 45.0%
!! ACATTTATTATATTATATAT+AGG - chr2.3:56369629-56369648 None:intergenic 5.0%
!! ATTAAAAAATCATTAAAAAA+AGG + chr2.3:56368454-56368473 MS.gene56006:intron 5.0%
!! TTAAAATATATATTTAACTA+CGG + chr2.3:56368501-56368520 MS.gene56006:intron 5.0%
AAGTGTGGTATATGCGTCCG+TGG + chr2.3:56368052-56368071 MS.gene56006:intron 50.0%
AATCCGTGGCCATAGGGAAT+AGG - chr2.3:56368078-56368097 None:intergenic 50.0%
AGACCAGCCCACAAAGAAAG+TGG + chr2.3:56369243-56369262 MS.gene56006:intron 50.0%
AGAGCTGCGATGGAGAGAAA+GGG + chr2.3:56370906-56370925 MS.gene56006:intron 50.0%
CAAACCGTGCTGTAAGGCTT+TGG - chr2.3:56368019-56368038 None:intergenic 50.0%
CAAAGCCTTACAGCACGGTT+TGG + chr2.3:56368017-56368036 MS.gene56006:intron 50.0%
CACAGGCAACAGTACCGTAA+TGG + chr2.3:56366296-56366315 MS.gene56006:CDS 50.0%
CTGACCCCTAATCCCATAAG+TGG + chr2.3:56367199-56367218 MS.gene56006:intron 50.0%
GACCAGCCCACAAAGAAAGT+GGG + chr2.3:56369244-56369263 MS.gene56006:intron 50.0%
GAGAGAAGCTTACGGAGAAG+CGG + chr2.3:56370729-56370748 MS.gene56006:intron 50.0%
GATCGGGGTTTCACCACTTA+TGG - chr2.3:56367215-56367234 None:intergenic 50.0%
GGAGTTTGGCAAAGAACTGC+AGG + chr2.3:56370793-56370812 MS.gene56006:intron 50.0%
GGCTACAGAGAGAGTTGTGA+TGG + chr2.3:56370840-56370859 MS.gene56006:intron 50.0%
GTCGATGTTCGTGTTGTGTC+CGG + chr2.3:56370182-56370201 MS.gene56006:intron 50.0%
TAAGTGGTGAAACCCCGATC+AGG + chr2.3:56367215-56367234 MS.gene56006:intron 50.0%
TGAAACACGGATACGGACAC+CGG - chr2.3:56370204-56370223 None:intergenic 50.0%
TGAAGCATAGACACGGACAC+CGG + chr2.3:56370313-56370332 MS.gene56006:intron 50.0%
TGCCCACAGCAAAAAAAGGG+TGG - chr2.3:56371268-56371287 None:intergenic 50.0%
TTTCTATGGCATAGGCCCAC+CGG + chr2.3:56367726-56367745 MS.gene56006:intron 50.0%
! GGCCACGGATTTTATGGCTT+TGG - chr2.3:56367998-56368017 None:intergenic 50.0%
! TCCTCGGATTAGGTGTGTCT+CGG + chr2.3:56370082-56370101 MS.gene56006:intron 50.0%
!! GCAGGTTATTTCTGGTGGGT+TGG - chr2.3:56369312-56369331 None:intergenic 50.0%
!! GGCTTTGGCCACGGATTTTA+TGG - chr2.3:56368004-56368023 None:intergenic 50.0%
!! GGTTGGCAGGTTATTTCTGG+TGG - chr2.3:56369317-56369336 None:intergenic 50.0%
ACCGAGACACACCTAATCCG+AGG - chr2.3:56370086-56370105 None:intergenic 55.0%
AGTGGCCAAACCGTGCTGTA+AGG - chr2.3:56368025-56368044 None:intergenic 55.0%
CTCCCACTTTCTTTGTGGGC+TGG - chr2.3:56369249-56369268 None:intergenic 55.0%
GAGAGCTGCGATGGAGAGAA+AGG + chr2.3:56370905-56370924 MS.gene56006:intron 55.0%
GCACGAACACTCCTCGGATT+AGG + chr2.3:56370072-56370091 MS.gene56006:intron 55.0%
GTGGCCAAAGCCTTACAGCA+CGG + chr2.3:56368012-56368031 MS.gene56006:intron 55.0%
TGCTGTGGGCAAGTCAAGTG+TGG + chr2.3:56371277-56371296 MS.gene56006:intron 55.0%
TGGCCATAGGGAATAGGCCA+CGG - chr2.3:56368072-56368091 None:intergenic 55.0%
TGGCCTATTCCCTATGGCCA+CGG + chr2.3:56368072-56368091 MS.gene56006:intron 55.0%
! GGGGTCAGAGCTTTTACGGT+AGG - chr2.3:56367187-56367206 None:intergenic 55.0%
! GTGCTGTAAGGCTTTGGCCA+CGG - chr2.3:56368013-56368032 None:intergenic 55.0%
CGTCCGTGGCCTATTCCCTA+TGG + chr2.3:56368066-56368085 MS.gene56006:intron 60.0%
GGAGAGAGAGAGAGCTGCGA+TGG + chr2.3:56370896-56370915 MS.gene56006:intron 60.0%
! TGCAGGTTGGCCGTCGTCAA+GGG + chr2.3:56370810-56370829 MS.gene56006:intron 60.0%
GCCGGCAGTTCCCTTGACGA+CGG - chr2.3:56370823-56370842 None:intergenic 65.0%
GCCGTCGTCAAGGGAACTGC+CGG + chr2.3:56370819-56370838 MS.gene56006:intron 65.0%
GCGGCGACGTGCTACAGTGT+TGG + chr2.3:56370748-56370767 MS.gene56006:intron 65.0%
! CTGCAGGTTGGCCGTCGTCA+AGG + chr2.3:56370809-56370828 MS.gene56006:intron 65.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 56366291 56371676 56366291 ID=MS.gene56006
chr2.3 mRNA 56366291 56371676 56366291 ID=MS.gene56006.t1;Parent=MS.gene56006
chr2.3 exon 56366291 56366369 56366291 ID=MS.gene56006.t1.exon1;Parent=MS.gene56006.t1
chr2.3 CDS 56366291 56366369 56366291 ID=cds.MS.gene56006.t1;Parent=MS.gene56006.t1
chr2.3 exon 56371348 56371676 56371348 ID=MS.gene56006.t1.exon2;Parent=MS.gene56006.t1
chr2.3 CDS 56371348 56371676 56371348 ID=cds.MS.gene56006.t1;Parent=MS.gene56006.t1
Gene Sequence

>MS.gene56006

ATGATCACAGGCAACAGTACCGTAATGGCTTCTCTCCTGCTACTATTTGCACTGTTTACGGTAACTCTTCGCTTGACAAGTAAGTAAAAAAGTAGAAGTTCCTAGCTAATTTTCTTATTTACTACTCCCTCCGGTCCTATTTATAAGAGAAAGTTGAGTCAATAAAAGTTAATGTATCTAGTTAAAAAGTCAGTCTAGATACATCAACTTTTATTGACCAAACTTTCTCTTATAAATAGGACCGGAGGGAGTATTAAACAATAAAGTTGATTTTTTTGACAGAAATAGATGATGTTGAATTGGTGACTTAATTTTTAGATAAAAAAAATGAAATTCATGTATTTAATTTTTTGTCTCTTAAGTAGACATATTGCACAGGTCCAATGAAGTTTAGCAACATTGTGGGCTAGTTGGTGTTCTTAATTGTGAGATGTTTATCGTCCAAAAGTTTGAAACTATGAATCAAACTCTATCATTTATAAATACATTTAGTTTCATTGTTTCAATAAATGTGAGACTTCTTAATTTTCTAGACTCTATCTTAAGTCAAAATGAGACTCTTATTTTTTTTACTTTTTTTAATGCTCTCAGCCACACACTCTTTTTATATATATCAAAGTAATTACACATGAATAAAAGACAAGCGGAAAACAAGCTGCGCCACGAGACTTTTTTAGATGACAAAATCAATCATTGTAAAAGCAACATTCATGAACCTAGGAGAGATAACATTGTTGTGCATGTCCCTTTGTACTCTATGTAGAAGGTCAACAACCCCAAGTGTTAGAAAGCCAAAAGTGTCAAAAGCAAATGATATAAAAACATGTTGATTGTCAGTACTCGCTTTCTCATGTTTGACCACTTTGCGTGACACGTCTTTTAAGGATGCATGTCCTACCGTAAAAGCTCTGACCCCTAATCCCATAAGTGGTGAAACCCCGATCAGGTACACCATAACATCTACATGCCTAATTGTCGATCTTCTATTTAGTGGGTTAGTCAGAAGGTTCACAGACGTCTCCTTCTTCACTGATACTCATGCCCGTTTGATAAGGACATCCTTAACAAAGTGCATGCTATACTTTAATCAGGAAGCTCCTTAAAATGAATAGTATTAAATTTTTCTTTTCTTTTTGACATGTTCTCAATGGAAACAAACCGTGTGACTATATCTATACCTTTTTTTTTGTAGGGAAATCTATACCGTTTCCTTTTTTTTGTTTTCATTGTTGAGTCTCAAGGCTTTAAAAATTTACAGGATACATTAGTTTGGTCACAAACATATATAAAATATTTTAAACACACTCACATGAATGTAAAAAGTATGAAAGAAAAAATAATTCAATAATATATACTATAAAAAATAGTTAAATTATGTATATTATATAAGTGTCAATTTAAATGATTTTGATGTGAGTTTGTAACTATCCAAATATTTCTATGGCATAGGCCCACCGGAGTGTTTTTATGTGTGGCAACTGGCATGGACAACTCTCAGCCACTTCTTAATTTCCAACATAAATCTAGTGGATAGTTTGCCGACAAATTTAATGAAGAATTTCATTTTTTAAACTCTAATTTTGCTAATGTAATTTTTTTAATAGTGTATATATGTTAAGACTAATTACAATGTTACAGTTTGAGTTGATTAAAGAGATGCCACTACAACATTTTTGAACTTAGGCCAGACTTCAAAAATCGTAGCCAAAGCCATAAAATCCGTGGCCAAAGCCTTACAGCACGGTTTGGCCACTATTTTTCAAGTGTGGTATATGCGTCCGTGGCCTATTCCCTATGGCCACGGATTTTTTACTATGCCCACGAAATTTTAGTATCCGTGGCTTAAAGTACTTCAATAGGGCACGGTTTTATGGCTTAGTTTAAACCACGGATTTTGGCATTTGATTTAGGCTAGGTGTCACCTGAACATTAGGCCACATTTTTATGACCGTGGCTACTGTTTTTTATCTGTAGCCAAATCTTGAGAGTCAGAATGGATTTAATGGCTTTAGTTCTAGGTATTGCCCTTTTAGTTACACTACTCATTCGTTGACTAAATTTTTGATATTGAGCGATGCTCTTTCTTTTAGGCCGCAACATTGTCTATTTATTTTTGCGCCTTTACTCAATATTTTCTAATATTTTTAAAAATAAATAAACGTAATTAAAAAATCATTAAAAAAAGGAACATAAATTAACATAATAGTGTCTTAAAATATATATTTAACTACGGAAAGACAAAGTCGTCTTTAACAAAATACTATAACATCCACAAAAAACCAGTTCATGGTTTCACAATAAACATAGTGGTCAAGTGTCTTGTCTTCCAAAAGAAAAAACAACTAAGTTTTTGATTCCAAAAAGTAAAATACGACCTAGTCTTGCATTTCCAAAACATGAAACAAGTATTACTTGCAATCCACTAGCTTCATTCCTCTCGAAGATCATCTTCGAGTCCAAACTGTAAAAATCAAAAAAATTACGTTAATAAAAATAATACAAAAAGTATTAGATCACATATACAATCTTTTAATAAAGGCACAAATGTTTTTAAATCTTTTAATTTTTTTACTAATTTATTTTATATCTTATCATTGGTATTTTATTTGCATTTTAGATCACATATACAATCTGATATAGAATATAGTCCAAAATATTAGAGACTAAAATTGTGTGTGAGCATTATAGATATACCCGCGTCAAAGACCATAATAAAGACATTAGTTCATTTTAATGTCGGAACAACATAAAGTGCACCAAAGCCACAAGAACACAACTGAAACAAACAAACTAATGTAATTGTTTTTTTGTCTAGTTTAAATTGAGATTTTCATAATTAAGTGATATCGGTTTCCAATGATCCTTCCAAATAAAGGCTACTACAAAGAACAAAACAATGCAACAAATTGTGAACACCTAGTTTTTTTGAAACAACATTGTATATATGGAAAGAGACCAGCCCACAAAGAAAGTGGGAGTTACTCACATAGTAGATACACAGGGAGCGCTACAGCTGCCCCAACCCACCAGAAATAACCTGCCAACCTAACCTAACAACACAGCAACAACAGGACATAAAATGTAGCACACCTATACAAATTACACCAAATAAACGAACACCTAGTACATATAACTTTCAAACAAAAGCATTTGACATTAACATGTTGAGACTAGGAATATTAAGAATACAATACAACAAATCATGGTATCTAAGAGATAGTTGAGGCAACTTGAGAGCATTGAAGTTAACAACTAATGTATGACATAATACCCCCTAAGTTGTTGCTACGATGTGTTGCAAACTAAGACTGACTTTTGATACCATTACCAAAAAGCCTATATATAATATAATAAATGTCACAAGATACATACCCACAATGTGCCTTATACATATGTTGGTTTCTAAAAAAATCACGTTGGCATGAAAATGCAGAATTTTGTAAAACTTTGTATAGTATTTTCAAAAAATGATGATAAAACAGCCTTCATAAAAATTAAAATGAAATACTTGGCTCAACCTTCATATCTTAAATCACATATTTAGTACACTGGTGGTACCAAACAGTCCCCATATTTGTCCAATTATTCTCATAGAAGTATAAATATGGTAAAATGAATTAAGATACAATTGAAGTATAAAGTGGCCAGTACAAACTAGTACATCAAAAGCACTCAAGAAGTATATGGCTAAAATTTGGTACAGTCGACCAAGAGAATCAAATATAGATAGAACAAAGGAGTATACGGCTAAAAGTAAGCCGTGACAATTACAATCTAAAAAGCACGAACACTCCTCGGATTAGGTGTGTCTCGGTGTCGAACATGTGTCGTGTCCGACATCGACACCTATAATTACACTCAATTATGTGATTTTCTTAAATTATTAACATTGTCGATGTTCGTGTTGTGTCCGGTGTCCGTATCCGTGTTTCATAGATTACAACAAAGTAACACATAAAAAACAGATTATTTTGTTGACAAACATAACAAATTAAACAAAGTTGATCACCCTTAGTAATCTATGAAGCATAGACACGGACACCGGACACGATTCTAATATGGACATGTTGGAAAGAAAGAAAAAAGGAGTTAATTGAAACTAATCATAATATTATTCAAAGTTTTAATAAAATTTTCAATCAATCAATTTAATATAATTAGATTTGAAGGGAAAAACCTCAATTTAAGAAAGCCAGTTTCATGGAATGAGAAAAATGAATCAACGCTTCAAATGTACAAAACTAGCATACAAAAGCAAAGAAAACACAGTTCTAAGAGTTTTTCCATAACTATAATAACGTGAATCGTGTTATCCTAGTGTTTCTATCAAAATCCCTAAATTAATTTCTAATAAGTTAATTTACAAGTTTCTAGTTAAAATCCCTAAATTAATTTCTAATAAGCAGTTTATAGAATCAACGAAAGGGTTTGAAGAACAGAGAGAAGCTTACGGAGAAGCGGCGACGTGCTACAGTGTTGGCTACAGAGAGAGCTGCGATTTTGGAGTTTGGCAAAGAACTGCAGGTTGGCCGTCGTCAAGGGAACTGCCGGCTACAGAGAGAGTTGTGATGGAGAGAAAGGGTTTGAGGGAAAGAAAGGGTTGTCGGAGAGAGAGAGAGCTGCGATGGAGAGAAAGGGTTATAGGAGAGAGAAAGGGGTTTGAGATATCTTATGTTAGATATGTTTTATCTTTGTTAAAGAATAATATTTTATTATTCTTTAATTATTTAATTACTAAGAGCCCAAAATTGAAAGACCCGCTCAGTTTTTTCATTCCCGCTACTTGTTTTAGGATTTGTGGGAAAGATTTTAGGGCACACCTTTTTTTCTTTAAACAGGACACAGTTATTATTCATGGCTAATGTGTGGCCAGTGATGTAATAGAGCACGGTTTTTGTTGGAAAACAAAAAGTGAGCCAAATATGTAATTTTTATGCCACACTACAAAAATCCATGGCTTATTCCTGTTATAAGCCACCCTTTTTTTGCTGTGGGCAAGTCAAGTGTGGTCTAAACTCAAAAATGTTGTAGTGTGCATATAATGTTTTCACAAGCAGGTGCTCAAATAGGTGTTTGTTATGGCATGGAAGGAACCAATCTACCATCACAACGTGAAGCAATAGATCTTTGCAAATCAAACAACATCCAAAGAATGAGGCTATATGATCCAAACCAAGATGCTCTTGAAGCACTTAGAAACTCTGGCATAGAGCTTATGTTAGGTGTGCCTAACCCAGATCTTCAAAACATTGCTACCAACAAAGACATTGCAAATCAATGGGTACAAAAAAATGTACTAAACTTCTACCCTAGTGTCAAAATCAAATACATCGCGGTCGGTAACGAAGTTAATCCAGTTGGTGGCAATTCTCAATTCGCAAAATTT
Protein sequence

>MS.gene56006.t1

MITGNSTVMASLLLLFALFTVTLRLTSAQIGVCYGMEGTNLPSQREAIDLCKSNNIQRMRLYDPNQDALEALRNSGIELMLGVPNPDLQNIATNKDIANQWVQKNVLNFYPSVKIKYIAVGNEVNPVGGNSQFAKF