Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56851.t1 | XP_013457775.1 | 98.2 | 338 | 6 | 0 | 1 | 338 | 12 | 349 | 3.60E-179 | 637.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56851.t1 | Q6RVV4 | 43.9 | 312 | 171 | 2 | 13 | 324 | 9 | 316 | 1.2e-63 | 245.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56851.t1 | A0A072UR37 | 98.2 | 338 | 6 | 0 | 1 | 338 | 12 | 349 | 2.6e-179 | 637.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049711 | MS.gene56851 | 0.803476 | 3.42E-49 | -1.69E-46 |
| MS.gene051719 | MS.gene56851 | 0.825803 | 3.84E-54 | -1.69E-46 |
| MS.gene051720 | MS.gene56851 | 0.836013 | 1.20E-56 | -1.69E-46 |
| MS.gene053144 | MS.gene56851 | 0.824318 | 8.61E-54 | -1.69E-46 |
| MS.gene053538 | MS.gene56851 | 0.800217 | 1.60E-48 | -1.69E-46 |
| MS.gene054584 | MS.gene56851 | 0.836959 | 6.89E-57 | -1.69E-46 |
| MS.gene055465 | MS.gene56851 | 0.811858 | 5.67E-51 | -1.69E-46 |
| MS.gene055466 | MS.gene56851 | 0.815218 | 1.03E-51 | -1.69E-46 |
| MS.gene055537 | MS.gene56851 | 0.832147 | 1.12E-55 | -1.69E-46 |
| MS.gene055890 | MS.gene56851 | 0.805982 | 1.03E-49 | -1.69E-46 |
| MS.gene055891 | MS.gene56851 | 0.810262 | 1.26E-50 | -1.69E-46 |
| MS.gene057082 | MS.gene56851 | 0.804 | 2.66E-49 | -1.69E-46 |
| MS.gene05894 | MS.gene56851 | 0.804752 | 1.86E-49 | -1.69E-46 |
| MS.gene059426 | MS.gene56851 | 0.801144 | 1.03E-48 | -1.69E-46 |
| MS.gene060519 | MS.gene56851 | 0.838131 | 3.45E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene061157 | MS.gene56851 | PPI |
| MS.gene061155 | MS.gene56851 | PPI |
| MS.gene061158 | MS.gene56851 | PPI |
| MS.gene006263 | MS.gene56851 | PPI |
| MS.gene49118 | MS.gene56851 | PPI |
| MS.gene34141 | MS.gene56851 | PPI |
| MS.gene006264 | MS.gene56851 | PPI |
| MS.gene56851 | MS.gene49117 | PPI |
| MS.gene49120 | MS.gene56851 | PPI |
| MS.gene006265 | MS.gene56851 | PPI |
| MS.gene34138 | MS.gene56851 | PPI |
| MS.gene34140 | MS.gene56851 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56851.t1 | MTR_4g105310 | 98.225 | 338 | 6 | 0 | 1 | 338 | 12 | 349 | 0.0 | 683 |
| MS.gene56851.t1 | MTR_3g077410 | 83.841 | 328 | 53 | 0 | 1 | 328 | 1 | 328 | 0.0 | 577 |
| MS.gene56851.t1 | MTR_4g105310 | 98.031 | 254 | 5 | 0 | 1 | 254 | 12 | 265 | 0.0 | 514 |
| MS.gene56851.t1 | MTR_8g099995 | 53.797 | 316 | 142 | 2 | 1 | 314 | 1 | 314 | 5.84e-120 | 349 |
| MS.gene56851.t1 | MTR_7g099850 | 48.607 | 323 | 161 | 3 | 1 | 322 | 1 | 319 | 3.53e-101 | 301 |
| MS.gene56851.t1 | MTR_1g068970 | 47.826 | 322 | 164 | 2 | 1 | 322 | 1 | 318 | 1.01e-100 | 300 |
| MS.gene56851.t1 | MTR_8g098415 | 44.127 | 315 | 172 | 2 | 7 | 321 | 2 | 312 | 3.91e-89 | 270 |
| MS.gene56851.t1 | MTR_8g098415 | 44.805 | 308 | 166 | 2 | 7 | 314 | 2 | 305 | 4.54e-89 | 270 |
| MS.gene56851.t1 | MTR_6g053550 | 47.419 | 310 | 158 | 2 | 14 | 321 | 17 | 323 | 5.42e-89 | 270 |
| MS.gene56851.t1 | MTR_1g100395 | 46.474 | 312 | 163 | 2 | 13 | 324 | 8 | 315 | 7.17e-89 | 269 |
| MS.gene56851.t1 | MTR_1g100305 | 43.590 | 312 | 172 | 2 | 13 | 324 | 8 | 315 | 1.00e-83 | 256 |
| MS.gene56851.t1 | MTR_1g100335 | 43.910 | 312 | 171 | 2 | 13 | 324 | 8 | 315 | 2.04e-82 | 253 |
| MS.gene56851.t1 | MTR_1g100315 | 42.949 | 312 | 174 | 2 | 13 | 324 | 8 | 315 | 5.56e-81 | 249 |
| MS.gene56851.t1 | MTR_1g068970 | 44.444 | 252 | 139 | 1 | 71 | 322 | 1 | 251 | 3.92e-71 | 222 |
| MS.gene56851.t1 | MTR_6g053600 | 45.283 | 265 | 140 | 3 | 15 | 277 | 4 | 265 | 2.31e-68 | 216 |
| MS.gene56851.t1 | MTR_8g098415 | 42.570 | 249 | 142 | 1 | 66 | 314 | 1 | 248 | 2.78e-67 | 212 |
| MS.gene56851.t1 | MTR_1g100335 | 46.371 | 248 | 130 | 1 | 13 | 260 | 8 | 252 | 3.16e-65 | 207 |
| MS.gene56851.t1 | MTR_1g100335 | 45.565 | 248 | 131 | 2 | 13 | 260 | 8 | 251 | 6.81e-65 | 206 |
| MS.gene56851.t1 | MTR_8g098415 | 47.032 | 219 | 113 | 1 | 7 | 225 | 2 | 217 | 6.23e-61 | 194 |
| MS.gene56851.t1 | MTR_8g022500 | 51.200 | 125 | 36 | 1 | 28 | 152 | 417 | 516 | 4.05e-29 | 117 |
| MS.gene56851.t1 | MTR_3g091070 | 29.470 | 302 | 176 | 7 | 35 | 321 | 38 | 317 | 7.80e-28 | 111 |
| MS.gene56851.t1 | MTR_3g009190 | 29.180 | 305 | 193 | 8 | 34 | 321 | 59 | 357 | 2.16e-27 | 110 |
| MS.gene56851.t1 | MTR_3g009190 | 29.180 | 305 | 193 | 8 | 34 | 321 | 77 | 375 | 3.06e-27 | 110 |
| MS.gene56851.t1 | MTR_6g453040 | 28.852 | 305 | 194 | 8 | 34 | 321 | 37 | 335 | 6.18e-27 | 109 |
| MS.gene56851.t1 | MTR_6g041980 | 29.730 | 259 | 167 | 6 | 41 | 298 | 70 | 314 | 4.32e-26 | 107 |
| MS.gene56851.t1 | MTR_3g009190 | 28.912 | 294 | 186 | 8 | 45 | 321 | 69 | 356 | 4.78e-24 | 101 |
| MS.gene56851.t1 | MTR_6g081020 | 28.797 | 316 | 185 | 10 | 29 | 317 | 51 | 353 | 3.03e-23 | 99.4 |
| MS.gene56851.t1 | MTR_2g079710 | 28.391 | 317 | 185 | 12 | 39 | 321 | 88 | 396 | 8.22e-22 | 95.5 |
| MS.gene56851.t1 | MTR_6g041980 | 28.804 | 184 | 124 | 2 | 41 | 224 | 70 | 246 | 9.90e-19 | 85.1 |
| MS.gene56851.t1 | MTR_3g098470 | 28.571 | 294 | 152 | 11 | 40 | 297 | 37 | 308 | 9.63e-17 | 80.1 |
| MS.gene56851.t1 | MTR_6g453040 | 30.198 | 202 | 126 | 4 | 34 | 224 | 59 | 256 | 5.84e-16 | 77.4 |
| MS.gene56851.t1 | MTR_4g058840 | 27.969 | 261 | 158 | 8 | 41 | 292 | 17 | 256 | 7.32e-16 | 77.0 |
| MS.gene56851.t1 | MTR_4g058820 | 27.969 | 261 | 158 | 8 | 41 | 292 | 17 | 256 | 7.32e-16 | 77.0 |
| MS.gene56851.t1 | MTR_1g051165 | 29.044 | 272 | 153 | 10 | 41 | 295 | 20 | 268 | 1.04e-15 | 76.6 |
| MS.gene56851.t1 | MTR_4g087460 | 27.000 | 300 | 171 | 7 | 40 | 305 | 24 | 309 | 2.46e-14 | 73.2 |
| MS.gene56851.t1 | MTR_7g076660 | 27.907 | 301 | 138 | 12 | 40 | 292 | 10 | 279 | 2.80e-14 | 72.8 |
| MS.gene56851.t1 | MTR_7g076660 | 27.907 | 301 | 138 | 12 | 40 | 292 | 9 | 278 | 3.07e-14 | 72.4 |
| MS.gene56851.t1 | MTR_8g031610 | 26.433 | 314 | 154 | 11 | 36 | 297 | 3 | 291 | 5.02e-14 | 72.0 |
| MS.gene56851.t1 | MTR_5g062280 | 24.920 | 313 | 163 | 11 | 36 | 299 | 5 | 294 | 2.61e-13 | 69.7 |
| MS.gene56851.t1 | MTR_6g453040 | 29.255 | 188 | 118 | 4 | 34 | 210 | 59 | 242 | 1.05e-12 | 67.4 |
| MS.gene56851.t1 | MTR_8g031630 | 25.321 | 312 | 153 | 11 | 40 | 297 | 9 | 294 | 4.04e-12 | 66.2 |
| MS.gene56851.t1 | MTR_8g089575 | 34.965 | 143 | 84 | 3 | 40 | 178 | 50 | 187 | 1.18e-11 | 65.1 |
| MS.gene56851.t1 | MTR_7g076655 | 26.117 | 291 | 156 | 10 | 40 | 292 | 9 | 278 | 1.30e-11 | 64.7 |
| MS.gene56851.t1 | MTR_8g031650 | 25.163 | 306 | 149 | 11 | 41 | 292 | 104 | 383 | 1.71e-11 | 65.1 |
| MS.gene56851.t1 | MTR_8g031650 | 25.080 | 311 | 153 | 11 | 41 | 297 | 270 | 554 | 3.03e-11 | 64.7 |
| MS.gene56851.t1 | MTR_8g031650 | 25.769 | 260 | 129 | 8 | 40 | 245 | 9 | 258 | 4.76e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56851.t1 | AT5G50130 | 72.404 | 337 | 91 | 2 | 1 | 336 | 1 | 336 | 1.88e-175 | 490 |
| MS.gene56851.t1 | AT5G50130 | 71.284 | 296 | 85 | 0 | 41 | 336 | 7 | 302 | 3.77e-153 | 432 |
| MS.gene56851.t1 | AT5G50130 | 71.044 | 297 | 85 | 1 | 41 | 336 | 7 | 303 | 9.75e-152 | 429 |
| MS.gene56851.t1 | AT5G50130 | 76.259 | 278 | 64 | 2 | 1 | 277 | 1 | 277 | 9.32e-151 | 427 |
| MS.gene56851.t1 | AT5G50130 | 75.986 | 279 | 64 | 3 | 1 | 277 | 1 | 278 | 2.28e-149 | 424 |
| MS.gene56851.t1 | AT5G50130 | 75.875 | 257 | 61 | 1 | 1 | 257 | 1 | 256 | 6.49e-140 | 397 |
| MS.gene56851.t1 | AT5G50130 | 75.581 | 258 | 61 | 2 | 1 | 257 | 1 | 257 | 1.81e-138 | 393 |
| MS.gene56851.t1 | AT5G50130 | 75.210 | 238 | 58 | 1 | 41 | 277 | 7 | 244 | 2.06e-127 | 367 |
| MS.gene56851.t1 | AT5G50130 | 74.895 | 239 | 58 | 2 | 41 | 277 | 7 | 245 | 5.07e-126 | 363 |
| MS.gene56851.t1 | AT4G24050 | 55.063 | 316 | 137 | 2 | 1 | 314 | 1 | 313 | 3.69e-122 | 355 |
| MS.gene56851.t1 | AT1G64590 | 52.994 | 334 | 142 | 3 | 1 | 322 | 1 | 331 | 6.46e-105 | 311 |
| MS.gene56851.t1 | AT4G24050 | 54.122 | 279 | 121 | 3 | 1 | 277 | 1 | 274 | 3.96e-102 | 302 |
| MS.gene56851.t1 | AT5G02540 | 48.328 | 329 | 166 | 2 | 3 | 331 | 2 | 326 | 2.68e-93 | 281 |
| MS.gene56851.t1 | AT2G37540 | 47.284 | 313 | 161 | 2 | 3 | 315 | 2 | 310 | 4.21e-93 | 280 |
| MS.gene56851.t1 | AT4G23420 | 43.312 | 314 | 175 | 1 | 7 | 320 | 2 | 312 | 2.07e-86 | 263 |
| MS.gene56851.t1 | AT4G23420 | 43.312 | 314 | 175 | 1 | 7 | 320 | 2 | 312 | 2.07e-86 | 263 |
| MS.gene56851.t1 | AT4G23430 | 42.553 | 329 | 181 | 2 | 7 | 335 | 2 | 322 | 1.39e-85 | 261 |
| MS.gene56851.t1 | AT4G23420 | 43.791 | 306 | 169 | 1 | 15 | 320 | 27 | 329 | 6.25e-85 | 260 |
| MS.gene56851.t1 | AT4G11410 | 45.364 | 302 | 161 | 2 | 13 | 314 | 8 | 305 | 1.54e-84 | 258 |
| MS.gene56851.t1 | AT4G23430 | 42.857 | 329 | 178 | 4 | 7 | 335 | 2 | 320 | 1.89e-83 | 256 |
| MS.gene56851.t1 | AT4G23430 | 39.818 | 329 | 180 | 3 | 7 | 335 | 2 | 312 | 6.78e-75 | 234 |
| MS.gene56851.t1 | AT2G37540 | 48.571 | 245 | 123 | 1 | 3 | 247 | 2 | 243 | 3.53e-74 | 230 |
| MS.gene56851.t1 | AT4G23430 | 40.122 | 329 | 177 | 5 | 7 | 335 | 2 | 310 | 8.09e-73 | 228 |
| MS.gene56851.t1 | AT4G11410 | 45.935 | 246 | 130 | 1 | 13 | 258 | 8 | 250 | 1.07e-68 | 216 |
| MS.gene56851.t1 | AT4G23420 | 42.803 | 264 | 148 | 1 | 7 | 270 | 2 | 262 | 1.73e-68 | 216 |
| MS.gene56851.t1 | AT4G23420 | 46.025 | 239 | 126 | 1 | 7 | 245 | 2 | 237 | 2.81e-67 | 212 |
| MS.gene56851.t1 | AT4G09750 | 29.021 | 286 | 183 | 6 | 20 | 298 | 19 | 291 | 1.19e-28 | 113 |
| MS.gene56851.t1 | AT4G27760 | 31.847 | 314 | 180 | 10 | 31 | 321 | 49 | 351 | 2.20e-25 | 105 |
| MS.gene56851.t1 | AT1G03630 | 29.968 | 317 | 179 | 13 | 39 | 321 | 91 | 398 | 5.18e-24 | 102 |
| MS.gene56851.t1 | AT5G15940 | 30.132 | 302 | 182 | 10 | 41 | 322 | 63 | 355 | 5.47e-24 | 101 |
| MS.gene56851.t1 | AT1G03630 | 29.968 | 317 | 179 | 13 | 39 | 321 | 89 | 396 | 5.49e-24 | 102 |
| MS.gene56851.t1 | AT5G15940 | 29.801 | 302 | 183 | 10 | 41 | 322 | 64 | 356 | 5.59e-24 | 101 |
| MS.gene56851.t1 | AT5G15940 | 29.801 | 302 | 183 | 10 | 41 | 322 | 64 | 356 | 5.59e-24 | 101 |
| MS.gene56851.t1 | AT5G53090 | 30.990 | 313 | 182 | 10 | 32 | 321 | 49 | 350 | 5.95e-24 | 101 |
| MS.gene56851.t1 | AT5G04070 | 29.642 | 307 | 184 | 11 | 41 | 327 | 62 | 356 | 2.20e-23 | 99.8 |
| MS.gene56851.t1 | AT5G54190 | 26.518 | 313 | 192 | 11 | 41 | 321 | 96 | 402 | 2.93e-23 | 99.8 |
| MS.gene56851.t1 | AT4G27440 | 28.115 | 313 | 187 | 11 | 41 | 321 | 92 | 398 | 7.15e-22 | 95.9 |
| MS.gene56851.t1 | AT4G27440 | 28.115 | 313 | 187 | 11 | 41 | 321 | 92 | 398 | 7.15e-22 | 95.9 |
| MS.gene56851.t1 | AT5G53100 | 29.450 | 309 | 185 | 9 | 36 | 321 | 43 | 341 | 9.44e-22 | 95.1 |
| MS.gene56851.t1 | AT5G15940 | 30.888 | 259 | 154 | 8 | 41 | 281 | 64 | 315 | 3.13e-21 | 92.8 |
| MS.gene56851.t1 | AT5G54190 | 25.000 | 284 | 176 | 10 | 69 | 321 | 4 | 281 | 6.08e-17 | 80.5 |
| MS.gene56851.t1 | AT3G46170 | 26.829 | 287 | 173 | 10 | 17 | 292 | 11 | 271 | 1.39e-16 | 79.3 |
| MS.gene56851.t1 | AT1G63380 | 28.571 | 238 | 139 | 8 | 18 | 248 | 8 | 221 | 3.44e-15 | 75.5 |
| MS.gene56851.t1 | AT3G55290 | 28.897 | 263 | 153 | 10 | 41 | 292 | 24 | 263 | 3.45e-15 | 75.1 |
| MS.gene56851.t1 | AT3G55290 | 28.897 | 263 | 153 | 10 | 41 | 292 | 23 | 262 | 4.18e-15 | 75.1 |
| MS.gene56851.t1 | AT5G61830 | 25.256 | 293 | 166 | 8 | 40 | 297 | 39 | 313 | 4.55e-15 | 75.5 |
| MS.gene56851.t1 | AT5G61830 | 25.256 | 293 | 166 | 8 | 40 | 297 | 39 | 313 | 4.55e-15 | 75.5 |
| MS.gene56851.t1 | AT3G55310 | 28.674 | 279 | 164 | 10 | 24 | 292 | 9 | 262 | 1.22e-14 | 73.6 |
| MS.gene56851.t1 | AT1G63380 | 26.241 | 282 | 168 | 10 | 24 | 292 | 11 | 265 | 1.41e-14 | 73.6 |
| MS.gene56851.t1 | AT1G63380 | 26.241 | 282 | 168 | 10 | 24 | 292 | 9 | 263 | 1.56e-14 | 73.2 |
| MS.gene56851.t1 | AT1G63380 | 28.879 | 232 | 134 | 8 | 24 | 248 | 7 | 214 | 1.83e-14 | 73.2 |
| MS.gene56851.t1 | AT1G62610 | 26.596 | 282 | 167 | 11 | 24 | 292 | 5 | 259 | 4.92e-14 | 71.6 |
| MS.gene56851.t1 | AT1G62610 | 26.596 | 282 | 167 | 11 | 24 | 292 | 11 | 265 | 5.72e-14 | 71.6 |
| MS.gene56851.t1 | AT1G62610 | 26.596 | 282 | 167 | 11 | 24 | 292 | 7 | 261 | 5.75e-14 | 71.6 |
| MS.gene56851.t1 | AT1G62610 | 26.596 | 282 | 167 | 11 | 24 | 292 | 6 | 260 | 5.79e-14 | 71.6 |
| MS.gene56851.t1 | AT3G03980 | 28.692 | 237 | 126 | 9 | 26 | 243 | 1 | 213 | 2.81e-12 | 66.6 |
Find 52 sgRNAs with CRISPR-Local
Find 185 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGCAGAATCATGGCTAATT+TGG | 0.178610 | 8.1:-17392847 | None:intergenic |
| ATTGCAGGGCCTAGTGGTTT+TGG | 0.230469 | 8.1:+17390296 | MS.gene56851:CDS |
| ACACTTACATGAGAATATTA+AGG | 0.272671 | 8.1:-17390815 | None:intergenic |
| GAAGGGAACAATAAGGTATT+TGG | 0.288975 | 8.1:+17390268 | MS.gene56851:CDS |
| TCAATTGAAGGTGCTACTTC+TGG | 0.308401 | 8.1:+17390588 | MS.gene56851:intron |
| AGGTATTTGGCAGGCATTGC+AGG | 0.316972 | 8.1:+17390281 | MS.gene56851:CDS |
| TTATACTGAGGTTATTCTAT+TGG | 0.330866 | 8.1:+17390725 | MS.gene56851:CDS |
| AATAGAATAACCTCAGTATA+AGG | 0.345535 | 8.1:-17390723 | None:intergenic |
| ATGAGAGCTGTTAGGTTTGA+AGG | 0.360069 | 8.1:-17390368 | None:intergenic |
| GAAGGTGCTACTTCTGGTAT+TGG | 0.364873 | 8.1:+17390594 | MS.gene56851:intron |
| AGGAATTATTAGAGCACATA+AGG | 0.377554 | 8.1:+17393088 | MS.gene56851:CDS |
| TGGTGCCAGGGACATGAAAA+AGG | 0.383783 | 8.1:+17390665 | MS.gene56851:CDS |
| TTTCTTCAGTAATTCATAGC+TGG | 0.397861 | 8.1:+17392640 | MS.gene56851:CDS |
| CGACTTAGACAAGCAGCAAT+TGG | 0.406522 | 8.1:+17393523 | MS.gene56851:CDS |
| GCAAATAAAACAGGCATTCA+AGG | 0.411603 | 8.1:+17392603 | MS.gene56851:CDS |
| CAGTATAAGGACTCTCCTCT+TGG | 0.421057 | 8.1:-17390710 | None:intergenic |
| TGAGAGTTGTGGTTGGTGCC+AGG | 0.429651 | 8.1:+17390652 | MS.gene56851:CDS |
| TTCTTCAGTAATTCATAGCT+GGG | 0.432368 | 8.1:+17392641 | MS.gene56851:CDS |
| ATTCCTGTCTTCACAATGCC+TGG | 0.434455 | 8.1:-17393071 | None:intergenic |
| CATCGATGAAGGGAACAATA+AGG | 0.437595 | 8.1:+17390261 | None:intergenic |
| TTCCTTCACATGCAGAATCA+TGG | 0.450116 | 8.1:-17392856 | None:intergenic |
| AGCACATAAGGGCTTAATAA+CGG | 0.451942 | 8.1:+17393100 | MS.gene56851:CDS |
| ATAGATACTGCAAATAAAAC+AGG | 0.452810 | 8.1:+17392594 | MS.gene56851:CDS |
| ACATTTGCTACAAATTACTT+AGG | 0.455021 | 8.1:+17391192 | MS.gene56851:CDS |
| GCACATAAGGGCTTAATAAC+GGG | 0.456442 | 8.1:+17393101 | MS.gene56851:CDS |
| CACTTACATGAGAATATTAA+GGG | 0.464360 | 8.1:-17390814 | None:intergenic |
| GAATTTCCCACTCACCCCTT+CGG | 0.485875 | 8.1:-17393404 | None:intergenic |
| TACCAGTGATGAGAGCTGTT+AGG | 0.489625 | 8.1:-17390376 | None:intergenic |
| TGCTTTAAAGACATGCTCAC+TGG | 0.492898 | 8.1:+17392681 | MS.gene56851:CDS |
| GGAAATGGCTAGACAACTAA+AGG | 0.519535 | 8.1:+17392875 | MS.gene56851:CDS |
| TGAGAGCTGTTAGGTTTGAA+GGG | 0.521862 | 8.1:-17390367 | None:intergenic |
| AGATACATGGTCTAGAATAG+AGG | 0.530017 | 8.1:-17393558 | None:intergenic |
| GATTCTGCATGTGAAGGAAA+TGG | 0.534551 | 8.1:+17392860 | MS.gene56851:CDS |
| GGAATTATTAGAGCACATAA+GGG | 0.541916 | 8.1:+17393089 | MS.gene56851:CDS |
| AACCTAACAGCTCTCATCAC+TGG | 0.543509 | 8.1:+17390374 | MS.gene56851:CDS |
| ACTATCAATGCAGTGCATCC+AGG | 0.545366 | 8.1:+17393053 | MS.gene56851:CDS |
| CATCCAGGCATTGTGAAGAC+AGG | 0.549477 | 8.1:+17393068 | MS.gene56851:CDS |
| GAGAGTTGTGGTTGGTGCCA+GGG | 0.563988 | 8.1:+17390653 | MS.gene56851:CDS |
| GAATTTGAGCCAAAACCACT+AGG | 0.566141 | 8.1:-17390305 | None:intergenic |
| GCAGGCATTGCAGGGCCTAG+TGG | 0.577354 | 8.1:+17390290 | MS.gene56851:CDS |
| GATACATGGTCTAGAATAGA+GGG | 0.578220 | 8.1:-17393557 | None:intergenic |
| GGTATTTGGCAGGCATTGCA+GGG | 0.578276 | 8.1:+17390282 | MS.gene56851:CDS |
| GAGCTGTTAGGTTTGAAGGG+AGG | 0.584163 | 8.1:-17390364 | None:intergenic |
| AGCCATGATTCTGCATGTGA+AGG | 0.585391 | 8.1:+17392854 | MS.gene56851:CDS |
| AGAGGAGAGTCCTTATACTG+AGG | 0.589592 | 8.1:+17390713 | MS.gene56851:CDS |
| GGAACAATAAGGTATTTGGC+AGG | 0.598423 | 8.1:+17390272 | MS.gene56851:CDS |
| AAAAGGGAATCATCGATGAA+GGG | 0.604378 | 8.1:+17390251 | None:intergenic |
| GCTGCTCAAAACGATATCAC+AGG | 0.618153 | 8.1:+17393250 | MS.gene56851:CDS |
| AGGAGTGTACTCTCATAACC+TGG | 0.628213 | 8.1:+17391143 | MS.gene56851:CDS |
| ATGCACGGTGTCTAGATACA+TGG | 0.629660 | 8.1:-17393571 | None:intergenic |
| AGAGGAGTGAGAGTTGTGGT+TGG | 0.631623 | 8.1:+17390645 | MS.gene56851:CDS |
| ACTTACATGAGAATATTAAG+GGG | 0.701725 | 8.1:-17390813 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATAAAAAACTAAAGTAA+TGG | + | chr8.1:17391578-17391597 | MS.gene56851:intron | 10.0% |
| !! | ATTAATCATGTTAAAAAATA+TGG | + | chr8.1:17392169-17392188 | MS.gene56851:intron | 10.0% |
| !!! | ACTAATATTTTTTTGAATAT+TGG | + | chr8.1:17392999-17393018 | MS.gene56851:intron | 10.0% |
| !!! | ATGAAATTTTTGAAAATATA+TGG | - | chr8.1:17393201-17393220 | None:intergenic | 10.0% |
| !!! | CTAATATTTTTTTGAATATT+GGG | + | chr8.1:17393000-17393019 | MS.gene56851:intron | 10.0% |
| !!! | TGCATTAATTAATTAAATTT+TGG | + | chr8.1:17392762-17392781 | MS.gene56851:intron | 10.0% |
| !! | TTAATGTATTATTCATACAT+AGG | - | chr8.1:17391500-17391519 | None:intergenic | 15.0% |
| !!! | AATGAATATATGTTTTGTTT+TGG | + | chr8.1:17390560-17390579 | MS.gene56851:intron | 15.0% |
| !!! | ATTTTTTAACATGATTAATC+AGG | - | chr8.1:17392168-17392187 | None:intergenic | 15.0% |
| !!! | TTGTTTCAAACAATTTTATA+TGG | + | chr8.1:17393160-17393179 | MS.gene56851:intron | 15.0% |
| !! | AACAAAAATGTAGTTACAAT+GGG | + | chr8.1:17392805-17392824 | MS.gene56851:intron | 20.0% |
| !! | ATACAATATAATCACAATTG+AGG | - | chr8.1:17390983-17391002 | None:intergenic | 20.0% |
| !! | ATTGTGATTATATTGTATTG+TGG | + | chr8.1:17390985-17391004 | MS.gene56851:intron | 20.0% |
| !! | GAATATTGGGAAATAATTAT+AGG | + | chr8.1:17393013-17393032 | MS.gene56851:intron | 20.0% |
| !! | GATGAAGTATAGTAAAAATT+AGG | + | chr8.1:17391453-17391472 | MS.gene56851:intron | 20.0% |
| !! | GATTTAAACTCCATAATAAA+AGG | + | chr8.1:17392008-17392027 | MS.gene56851:intron | 20.0% |
| !! | GTCATATCATATATGATTAA+GGG | + | chr8.1:17392946-17392965 | MS.gene56851:intron | 20.0% |
| !! | TAACAAAAATGTAGTTACAA+TGG | + | chr8.1:17392804-17392823 | MS.gene56851:intron | 20.0% |
| !! | TGTCATATCATATATGATTA+AGG | + | chr8.1:17392945-17392964 | MS.gene56851:intron | 20.0% |
| !! | TTGAAAATATATGGCTTAAT+TGG | - | chr8.1:17393192-17393211 | None:intergenic | 20.0% |
| !! | TTTAAATGGACGAAAAAAAT+TGG | + | chr8.1:17392060-17392079 | MS.gene56851:intron | 20.0% |
| !!! | AACATTTTTGAAAGCTAATT+TGG | + | chr8.1:17392377-17392396 | MS.gene56851:intron | 20.0% |
| !!! | AATTTGTTTGAATTAGAAGA+AGG | + | chr8.1:17392439-17392458 | MS.gene56851:intron | 20.0% |
| !!! | ACACAAGTTTTTTTTTGTTA+TGG | - | chr8.1:17391789-17391808 | None:intergenic | 20.0% |
| !!! | ATTTTTACTATACTTCATCA+TGG | - | chr8.1:17391452-17391471 | None:intergenic | 20.0% |
| !!! | TTGTGACTTTTTTTTTTATG+TGG | - | chr8.1:17391918-17391937 | None:intergenic | 20.0% |
| !!! | TTTTTCGTCCATTTAAATTT+TGG | - | chr8.1:17392057-17392076 | None:intergenic | 20.0% |
| ! | AAATATTAAGGCAATTTGAG+AGG | - | chr8.1:17392918-17392937 | None:intergenic | 25.0% |
| ! | AAGCATAAGAAATGACAATA+AGG | - | chr8.1:17390860-17390879 | None:intergenic | 25.0% |
| ! | AATAGAATAACCTCAGTATA+AGG | - | chr8.1:17390726-17390745 | None:intergenic | 25.0% |
| ! | ACACTTACATGAGAATATTA+AGG | - | chr8.1:17390818-17390837 | None:intergenic | 25.0% |
| ! | ACTTACATGAGAATATTAAG+GGG | - | chr8.1:17390816-17390835 | None:intergenic | 25.0% |
| ! | ATAGATACTGCAAATAAAAC+AGG | + | chr8.1:17392594-17392613 | MS.gene56851:CDS | 25.0% |
| ! | CACTTACATGAGAATATTAA+GGG | - | chr8.1:17390817-17390836 | None:intergenic | 25.0% |
| ! | CTTATGTATATCGTACTAAA+CGG | - | chr8.1:17391654-17391673 | None:intergenic | 25.0% |
| ! | CTTGTGTAATAAGAAACTTA+AGG | + | chr8.1:17391802-17391821 | MS.gene56851:intron | 25.0% |
| ! | CTTTGATGCAATAAAAAACA+AGG | - | chr8.1:17393231-17393250 | None:intergenic | 25.0% |
| ! | GAACTTTAGTAGTCTAATTA+TGG | + | chr8.1:17391952-17391971 | MS.gene56851:intron | 25.0% |
| ! | TAGCTTTCAAAAATGTTTCA+TGG | - | chr8.1:17392374-17392393 | None:intergenic | 25.0% |
| ! | TCCATAATAAAAGGTCTAAA+CGG | + | chr8.1:17392017-17392036 | MS.gene56851:intron | 25.0% |
| ! | TGACAAGAGCAAAAATATTA+AGG | - | chr8.1:17392930-17392949 | None:intergenic | 25.0% |
| ! | TGCAAGTATATACATAATAC+TGG | - | chr8.1:17390512-17390531 | None:intergenic | 25.0% |
| ! | TTATACTGAGGTTATTCTAT+TGG | + | chr8.1:17390725-17390744 | MS.gene56851:CDS | 25.0% |
| ! | TTATGTATATCGTACTAAAC+GGG | - | chr8.1:17391653-17391672 | None:intergenic | 25.0% |
| ! | TTCGTAAAATATAACGAGTT+GGG | + | chr8.1:17391704-17391723 | MS.gene56851:intron | 25.0% |
| ! | TTTGTTAACAAAAATGCTAC+TGG | + | chr8.1:17392563-17392582 | MS.gene56851:CDS | 25.0% |
| !! | AACTCGTTATATTTTACGAA+CGG | - | chr8.1:17391704-17391723 | None:intergenic | 25.0% |
| !! | ACATTTGCTACAAATTACTT+AGG | + | chr8.1:17391192-17391211 | MS.gene56851:CDS | 25.0% |
| !! | CAAATCTAAAGCTAAAAACT+CGG | - | chr8.1:17390793-17390812 | None:intergenic | 25.0% |
| !! | GCATTTTTGTCTATTGTTAA+GGG | - | chr8.1:17391313-17391332 | None:intergenic | 25.0% |
| !! | TGCATTTTTGTCTATTGTTA+AGG | - | chr8.1:17391314-17391333 | None:intergenic | 25.0% |
| !! | TGTCAATTCAATTTTCTCTT+CGG | - | chr8.1:17391175-17391194 | None:intergenic | 25.0% |
| !! | TTCTTAATTTTGCAGAGAAA+AGG | - | chr8.1:17392732-17392751 | None:intergenic | 25.0% |
| !! | TTTTCATTCTTACATATGAG+AGG | + | chr8.1:17391220-17391239 | MS.gene56851:intron | 25.0% |
| !!! | GTTTTGGAATTTTCAATTGA+AGG | + | chr8.1:17390576-17390595 | MS.gene56851:intron | 25.0% |
| AAAACTAAAGTAATGGTGCA+TGG | + | chr8.1:17391585-17391604 | MS.gene56851:intron | 30.0% | |
| AATGTACCTACCTAATTAGA+AGG | - | chr8.1:17391551-17391570 | None:intergenic | 30.0% | |
| AGGAATTATTAGAGCACATA+AGG | + | chr8.1:17393088-17393107 | MS.gene56851:CDS | 30.0% | |
| AGTGAAAGAAAAAATCCAAG+AGG | + | chr8.1:17390695-17390714 | MS.gene56851:CDS | 30.0% | |
| ATATATGTTTGCACTTTGCA+GGG | + | chr8.1:17393343-17393362 | MS.gene56851:intron | 30.0% | |
| ATTAAAATCCCTATTCACCA+TGG | - | chr8.1:17393323-17393342 | None:intergenic | 30.0% | |
| CACATGGACCAAAATTTAAA+TGG | + | chr8.1:17392046-17392065 | MS.gene56851:intron | 30.0% | |
| CTTTAGTAGTCTAATTATGG+TGG | + | chr8.1:17391955-17391974 | MS.gene56851:intron | 30.0% | |
| GGAATTATTAGAGCACATAA+GGG | + | chr8.1:17393089-17393108 | MS.gene56851:CDS | 30.0% | |
| GTTCGTAAAATATAACGAGT+TGG | + | chr8.1:17391703-17391722 | MS.gene56851:intron | 30.0% | |
| TATATATGTTTGCACTTTGC+AGG | + | chr8.1:17393342-17393361 | MS.gene56851:intron | 30.0% | |
| TATGTATATCGTACTAAACG+GGG | - | chr8.1:17391652-17391671 | None:intergenic | 30.0% | |
| TCGTAAAATATAACGAGTTG+GGG | + | chr8.1:17391705-17391724 | MS.gene56851:intron | 30.0% | |
| TCTGACTACAATATAAAACC+CGG | - | chr8.1:17390911-17390930 | None:intergenic | 30.0% | |
| TGATTCATCAGTTGAGAAAA+GGG | + | chr8.1:17390881-17390900 | MS.gene56851:intron | 30.0% | |
| TTAGCACAACATGAATTAAC+AGG | - | chr8.1:17391081-17391100 | None:intergenic | 30.0% | |
| TTCTTCAGTAATTCATAGCT+GGG | + | chr8.1:17392641-17392660 | MS.gene56851:CDS | 30.0% | |
| TTCTTGTCTTCTTAAATTGC+AGG | + | chr8.1:17392534-17392553 | MS.gene56851:intron | 30.0% | |
| TTGATTCATCAGTTGAGAAA+AGG | + | chr8.1:17390880-17390899 | MS.gene56851:intron | 30.0% | |
| TTGGGAAATAATTATAGGCA+AGG | + | chr8.1:17393018-17393037 | MS.gene56851:intron | 30.0% | |
| TTTCTTCAGTAATTCATAGC+TGG | + | chr8.1:17392640-17392659 | MS.gene56851:CDS | 30.0% | |
| ! | ACCGTTTAGACCTTTTATTA+TGG | - | chr8.1:17392021-17392040 | None:intergenic | 30.0% |
| !! | CATTTAAATTTTGGTCCATG+TGG | - | chr8.1:17392048-17392067 | None:intergenic | 30.0% |
| !! | TATTGTTGATTCAAGTTGAG+TGG | - | chr8.1:17392301-17392320 | None:intergenic | 30.0% |
| AGAAAAGAATACCCACAGAT+AGG | + | chr8.1:17392465-17392484 | MS.gene56851:intron | 35.0% | |
| AGCACATAAGGGCTTAATAA+CGG | + | chr8.1:17393100-17393119 | MS.gene56851:CDS | 35.0% | |
| ATGCAGAATCATGGCTAATT+TGG | - | chr8.1:17392850-17392869 | None:intergenic | 35.0% | |
| GAGACAGACAAAATCATTCA+AGG | - | chr8.1:17391529-17391548 | None:intergenic | 35.0% | |
| GCAAATAAAACAGGCATTCA+AGG | + | chr8.1:17392603-17392622 | MS.gene56851:CDS | 35.0% | |
| GTGATTAATCAAGTATCCCA+GGG | + | chr8.1:17392330-17392349 | MS.gene56851:intron | 35.0% | |
| GTTAAGGGCTACAAACTAAA+GGG | - | chr8.1:17391298-17391317 | None:intergenic | 35.0% | |
| TAGAGAATCGTGATCAAATG+TGG | + | chr8.1:17390948-17390967 | MS.gene56851:intron | 35.0% | |
| TATTCATACATAGGTCACCT+AGG | - | chr8.1:17391491-17391510 | None:intergenic | 35.0% | |
| TGATTAATCAAGTATCCCAG+GGG | + | chr8.1:17392331-17392350 | MS.gene56851:intron | 35.0% | |
| TGCAGAGAAAAGGAAACAAA+TGG | - | chr8.1:17392722-17392741 | None:intergenic | 35.0% | |
| TGTTAAGGGCTACAAACTAA+AGG | - | chr8.1:17391299-17391318 | None:intergenic | 35.0% | |
| TTGTCTGTCTCCTTCTAATT+AGG | + | chr8.1:17391538-17391557 | MS.gene56851:intron | 35.0% | |
| TTTCCAAACCATGGTGAATA+GGG | + | chr8.1:17393312-17393331 | MS.gene56851:intron | 35.0% | |
| ! | AGATACATGGTCTAGAATAG+AGG | - | chr8.1:17393561-17393580 | None:intergenic | 35.0% |
| ! | GAAGGGAACAATAAGGTATT+TGG | + | chr8.1:17390268-17390287 | MS.gene56851:CDS | 35.0% |
| ! | GATACATGGTCTAGAATAGA+GGG | - | chr8.1:17393560-17393579 | None:intergenic | 35.0% |
| ! | TGTATTGTTCCACAGCTTTT+TGG | - | chr8.1:17393485-17393504 | None:intergenic | 35.0% |
| ! | TTTTCCAAACCATGGTGAAT+AGG | + | chr8.1:17393311-17393330 | MS.gene56851:intron | 35.0% |
| !! | TAAATTTTGGTCCATGTGGT+TGG | - | chr8.1:17392044-17392063 | None:intergenic | 35.0% |
| !! | TTGTTTTGCAGAAACAATGC+AGG | + | chr8.1:17391123-17391142 | MS.gene56851:intron | 35.0% |
| !!! | ATACTAGCTTGTTTTACCCA+CGG | - | chr8.1:17391761-17391780 | None:intergenic | 35.0% |
| !!! | TACCTTTGTTTTCCAAACCA+TGG | + | chr8.1:17393303-17393322 | MS.gene56851:intron | 35.0% |
| !!! | TTTCATGGACAGCCATTTTT+TGG | - | chr8.1:17392359-17392378 | None:intergenic | 35.0% |
| AAAAAGAGGAGTGAGAGTTG+TGG | + | chr8.1:17390641-17390660 | MS.gene56851:CDS | 40.0% | |
| AATCAGAAGCCAAAAAGCTG+TGG | + | chr8.1:17393473-17393492 | MS.gene56851:CDS | 40.0% | |
| AATCCCTATTCACCATGGTT+TGG | - | chr8.1:17393318-17393337 | None:intergenic | 40.0% | |
| AGATTTGCGACTGCAATCTA+GGG | - | chr8.1:17391041-17391060 | None:intergenic | 40.0% | |
| ATGAGAGCTGTTAGGTTTGA+AGG | - | chr8.1:17390371-17390390 | None:intergenic | 40.0% | |
| CGTGATTAATCAAGTATCCC+AGG | + | chr8.1:17392329-17392348 | MS.gene56851:intron | 40.0% | |
| CTCTAAGCCAAAAAACCGAA+GGG | + | chr8.1:17393389-17393408 | MS.gene56851:CDS | 40.0% | |
| CTGTCTCCTTCTAATTAGGT+AGG | + | chr8.1:17391542-17391561 | MS.gene56851:intron | 40.0% | |
| GAATTTGAGCCAAAACCACT+AGG | - | chr8.1:17390308-17390327 | None:intergenic | 40.0% | |
| GATTCTGCATGTGAAGGAAA+TGG | + | chr8.1:17392860-17392879 | MS.gene56851:CDS | 40.0% | |
| GCACATAAGGGCTTAATAAC+GGG | + | chr8.1:17393101-17393120 | MS.gene56851:CDS | 40.0% | |
| GGAAATGGCTAGACAACTAA+AGG | + | chr8.1:17392875-17392894 | MS.gene56851:CDS | 40.0% | |
| GGGTAAAACAAGCTAGTATG+AGG | + | chr8.1:17391762-17391781 | MS.gene56851:intron | 40.0% | |
| GTGTGGAATTCATATTCTGC+TGG | - | chr8.1:17391276-17391295 | None:intergenic | 40.0% | |
| TCTAAGCCAAAAAACCGAAG+GGG | + | chr8.1:17393390-17393409 | MS.gene56851:CDS | 40.0% | |
| TGAGAGCTGTTAGGTTTGAA+GGG | - | chr8.1:17390370-17390389 | None:intergenic | 40.0% | |
| TTCCTTCACATGCAGAATCA+TGG | - | chr8.1:17392859-17392878 | None:intergenic | 40.0% | |
| ! | CACCATGGTTTGGAAAACAA+AGG | - | chr8.1:17393308-17393327 | None:intergenic | 40.0% |
| ! | GCTAGAGTGTTAGCAAAAAG+AGG | + | chr8.1:17390627-17390646 | MS.gene56851:CDS | 40.0% |
| ! | GGAACAATAAGGTATTTGGC+AGG | + | chr8.1:17390272-17390291 | MS.gene56851:CDS | 40.0% |
| ! | TTTGTACTGTGTTGATCCGT+GGG | + | chr8.1:17391742-17391761 | MS.gene56851:intron | 40.0% |
| ! | TTTTCTCTTCGGAGAATTCC+AGG | - | chr8.1:17391164-17391183 | None:intergenic | 40.0% |
| !! | GTTGATTCAAGTTGAGTGGA+TGG | - | chr8.1:17392297-17392316 | None:intergenic | 40.0% |
| !! | TCAATTGAAGGTGCTACTTC+TGG | + | chr8.1:17390588-17390607 | MS.gene56851:intron | 40.0% |
| !! | TGCTTTAAAGACATGCTCAC+TGG | + | chr8.1:17392681-17392700 | MS.gene56851:CDS | 40.0% |
| AAAAAACCGAAGGGGTGAGT+GGG | + | chr8.1:17393398-17393417 | MS.gene56851:CDS | 45.0% | |
| AACCTAACAGCTCTCATCAC+TGG | + | chr8.1:17390374-17390393 | MS.gene56851:CDS | 45.0% | |
| ACTATCAATGCAGTGCATCC+AGG | + | chr8.1:17393053-17393072 | MS.gene56851:CDS | 45.0% | |
| AGAGGAGAGTCCTTATACTG+AGG | + | chr8.1:17390713-17390732 | MS.gene56851:CDS | 45.0% | |
| AGCCACTCTTTGTTAGAGGT+GGG | + | chr8.1:17391610-17391629 | MS.gene56851:intron | 45.0% | |
| AGCCATGATTCTGCATGTGA+AGG | + | chr8.1:17392854-17392873 | MS.gene56851:CDS | 45.0% | |
| AGTTGAGAAAAGGGAGATCC+GGG | + | chr8.1:17390890-17390909 | MS.gene56851:intron | 45.0% | |
| ATAGGCAACAGAGAGGGATT+TGG | + | chr8.1:17392483-17392502 | MS.gene56851:intron | 45.0% | |
| ATTCCTGTCTTCACAATGCC+TGG | - | chr8.1:17393074-17393093 | None:intergenic | 45.0% | |
| CAGTATAAGGACTCTCCTCT+TGG | - | chr8.1:17390713-17390732 | None:intergenic | 45.0% | |
| CAGTTGAGAAAAGGGAGATC+CGG | + | chr8.1:17390889-17390908 | MS.gene56851:intron | 45.0% | |
| CGACTTAGACAAGCAGCAAT+TGG | + | chr8.1:17393523-17393542 | MS.gene56851:CDS | 45.0% | |
| GAGATTTGCGACTGCAATCT+AGG | - | chr8.1:17391042-17391061 | None:intergenic | 45.0% | |
| GCTGCTCAAAACGATATCAC+AGG | + | chr8.1:17393250-17393269 | MS.gene56851:CDS | 45.0% | |
| GTATATCGTACTAAACGGGG+CGG | - | chr8.1:17391649-17391668 | None:intergenic | 45.0% | |
| TACCAGTGATGAGAGCTGTT+AGG | - | chr8.1:17390379-17390398 | None:intergenic | 45.0% | |
| TACCCACCTCTAACAAAGAG+TGG | - | chr8.1:17391615-17391634 | None:intergenic | 45.0% | |
| TATATCGTACTAAACGGGGC+GGG | - | chr8.1:17391648-17391667 | None:intergenic | 45.0% | |
| TGAACAAGTCCGTTAACACG+CGG | - | chr8.1:17392103-17392122 | None:intergenic | 45.0% | |
| TTAGGCTCAAACAGAGTCCT+AGG | + | chr8.1:17391471-17391490 | MS.gene56851:intron | 45.0% | |
| TTTGTTAGAGGTGGGTACTC+AGG | + | chr8.1:17391618-17391637 | MS.gene56851:intron | 45.0% | |
| ! | AAATTGGTTCAAAGCCCCTG+TGG | + | chr8.1:17392076-17392095 | MS.gene56851:intron | 45.0% |
| ! | AGGAGTGTACTCTCATAACC+TGG | + | chr8.1:17391143-17391162 | MS.gene56851:CDS | 45.0% |
| ! | GCTCTAAGCCAAAAAACCGA+AGG | + | chr8.1:17393388-17393407 | MS.gene56851:CDS | 45.0% |
| ! | GTTTGTACTGTGTTGATCCG+TGG | + | chr8.1:17391741-17391760 | MS.gene56851:intron | 45.0% |
| !! | ATCCCAGGGGTACCAAAAAA+TGG | + | chr8.1:17392344-17392363 | MS.gene56851:intron | 45.0% |
| !! | CATAGCCTTTTTCATGTCCC+TGG | - | chr8.1:17390673-17390692 | None:intergenic | 45.0% |
| !! | GAAGGTGCTACTTCTGGTAT+TGG | + | chr8.1:17390594-17390613 | MS.gene56851:intron | 45.0% |
| !!! | AGCCATTTTTTGGTACCCCT+GGG | - | chr8.1:17392349-17392368 | None:intergenic | 45.0% |
| AGAGGAGTGAGAGTTGTGGT+TGG | + | chr8.1:17390645-17390664 | MS.gene56851:CDS | 50.0% | |
| CAAAAAACCGAAGGGGTGAG+TGG | + | chr8.1:17393397-17393416 | MS.gene56851:CDS | 50.0% | |
| CACCTCTAACAAAGAGTGGC+TGG | - | chr8.1:17391611-17391630 | None:intergenic | 50.0% | |
| CAGCCACTCTTTGTTAGAGG+TGG | + | chr8.1:17391609-17391628 | MS.gene56851:intron | 50.0% | |
| CCACAGATAGGCAACAGAGA+GGG | + | chr8.1:17392477-17392496 | MS.gene56851:intron | 50.0% | |
| CCTCTCTGTTGCCTATCTGT+GGG | - | chr8.1:17392479-17392498 | None:intergenic | 50.0% | |
| GAATTTCCCACTCACCCCTT+CGG | - | chr8.1:17393407-17393426 | None:intergenic | 50.0% | |
| GAGCTGTTAGGTTTGAAGGG+AGG | - | chr8.1:17390367-17390386 | None:intergenic | 50.0% | |
| GGGCTACAAACTAAAGGGTG+TGG | - | chr8.1:17391293-17391312 | None:intergenic | 50.0% | |
| GTCTAAACGGTCCAACCACA+TGG | + | chr8.1:17392030-17392049 | MS.gene56851:intron | 50.0% | |
| TTAGAGGTGGGTACTCAGGT+TGG | + | chr8.1:17391622-17391641 | MS.gene56851:intron | 50.0% | |
| ! | AGGTATTTGGCAGGCATTGC+AGG | + | chr8.1:17390281-17390300 | MS.gene56851:CDS | 50.0% |
| ! | ATTGCAGGGCCTAGTGGTTT+TGG | + | chr8.1:17390296-17390315 | MS.gene56851:CDS | 50.0% |
| ! | CATCCAGGCATTGTGAAGAC+AGG | + | chr8.1:17393068-17393087 | MS.gene56851:CDS | 50.0% |
| ! | GGTATTTGGCAGGCATTGCA+GGG | + | chr8.1:17390282-17390301 | MS.gene56851:CDS | 50.0% |
| ! | TGGTGCCAGGGACATGAAAA+AGG | + | chr8.1:17390665-17390684 | MS.gene56851:CDS | 50.0% |
| !!! | CACTCACCCCTTCGGTTTTT+TGG | - | chr8.1:17393399-17393418 | None:intergenic | 50.0% |
| !!! | CAGCCATTTTTTGGTACCCC+TGG | - | chr8.1:17392350-17392369 | None:intergenic | 50.0% |
| CCCACAGATAGGCAACAGAG+AGG | + | chr8.1:17392476-17392495 | MS.gene56851:intron | 55.0% | |
| CCCTCTCTGTTGCCTATCTG+TGG | - | chr8.1:17392480-17392499 | None:intergenic | 55.0% | |
| GGCCAGCCACTCTTTGTTAG+AGG | + | chr8.1:17391606-17391625 | MS.gene56851:intron | 55.0% | |
| ! | TGAGAGTTGTGGTTGGTGCC+AGG | + | chr8.1:17390652-17390671 | MS.gene56851:CDS | 55.0% |
| !! | GAGAGTTGTGGTTGGTGCCA+GGG | + | chr8.1:17390653-17390672 | MS.gene56851:CDS | 55.0% |
| CCCTGTGGACCGCGTGTTAA+CGG | + | chr8.1:17392091-17392110 | MS.gene56851:intron | 60.0% | |
| CCGTTAACACGCGGTCCACA+GGG | - | chr8.1:17392094-17392113 | None:intergenic | 60.0% | |
| CGTTAACACGCGGTCCACAG+GGG | - | chr8.1:17392093-17392112 | None:intergenic | 60.0% | |
| TCCGTTAACACGCGGTCCAC+AGG | - | chr8.1:17392095-17392114 | None:intergenic | 60.0% | |
| ! | GCAGGCATTGCAGGGCCTAG+TGG | + | chr8.1:17390290-17390309 | MS.gene56851:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 17390266 | 17393582 | 17390266 | ID=MS.gene56851 |
| chr8.1 | mRNA | 17390266 | 17393582 | 17390266 | ID=MS.gene56851.t1;Parent=MS.gene56851 |
| chr8.1 | exon | 17390266 | 17390395 | 17390266 | ID=MS.gene56851.t1.exon1;Parent=MS.gene56851.t1 |
| chr8.1 | CDS | 17390266 | 17390395 | 17390266 | ID=cds.MS.gene56851.t1;Parent=MS.gene56851.t1 |
| chr8.1 | exon | 17390598 | 17390829 | 17390598 | ID=MS.gene56851.t1.exon2;Parent=MS.gene56851.t1 |
| chr8.1 | CDS | 17390598 | 17390829 | 17390598 | ID=cds.MS.gene56851.t1;Parent=MS.gene56851.t1 |
| chr8.1 | exon | 17391134 | 17391213 | 17391134 | ID=MS.gene56851.t1.exon3;Parent=MS.gene56851.t1 |
| chr8.1 | CDS | 17391134 | 17391213 | 17391134 | ID=cds.MS.gene56851.t1;Parent=MS.gene56851.t1 |
| chr8.1 | exon | 17392556 | 17392709 | 17392556 | ID=MS.gene56851.t1.exon4;Parent=MS.gene56851.t1 |
| chr8.1 | CDS | 17392556 | 17392709 | 17392556 | ID=cds.MS.gene56851.t1;Parent=MS.gene56851.t1 |
| chr8.1 | exon | 17392818 | 17392896 | 17392818 | ID=MS.gene56851.t1.exon5;Parent=MS.gene56851.t1 |
| chr8.1 | CDS | 17392818 | 17392896 | 17392818 | ID=cds.MS.gene56851.t1;Parent=MS.gene56851.t1 |
| chr8.1 | exon | 17393035 | 17393122 | 17393035 | ID=MS.gene56851.t1.exon6;Parent=MS.gene56851.t1 |
| chr8.1 | CDS | 17393035 | 17393122 | 17393035 | ID=cds.MS.gene56851.t1;Parent=MS.gene56851.t1 |
| chr8.1 | exon | 17393225 | 17393271 | 17393225 | ID=MS.gene56851.t1.exon7;Parent=MS.gene56851.t1 |
| chr8.1 | CDS | 17393225 | 17393271 | 17393225 | ID=cds.MS.gene56851.t1;Parent=MS.gene56851.t1 |
| chr8.1 | exon | 17393364 | 17393582 | 17393364 | ID=MS.gene56851.t1.exon8;Parent=MS.gene56851.t1 |
| chr8.1 | CDS | 17393364 | 17393582 | 17393364 | ID=cds.MS.gene56851.t1;Parent=MS.gene56851.t1 |
| Gene Sequence |
| Protein sequence |
