Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56878.t1 | XP_003608963.2 | 98.5 | 475 | 7 | 0 | 1 | 475 | 1 | 475 | 2.30E-269 | 937.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56878.t1 | Q9XFS9 | 81.6 | 477 | 85 | 2 | 1 | 475 | 2 | 477 | 2.6e-221 | 769.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56878.t1 | G7JNV7 | 98.5 | 475 | 7 | 0 | 1 | 475 | 1 | 475 | 1.7e-269 | 937.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049222 | MS.gene56878 | 0.81334 | 2.69E-51 | -1.69E-46 |
| MS.gene049232 | MS.gene56878 | 0.80105 | 1.08E-48 | -1.69E-46 |
| MS.gene049285 | MS.gene56878 | 0.804156 | 2.47E-49 | -1.69E-46 |
| MS.gene049627 | MS.gene56878 | 0.820988 | 5.13E-53 | -1.69E-46 |
| MS.gene050518 | MS.gene56878 | 0.829603 | 4.69E-55 | -1.69E-46 |
| MS.gene050577 | MS.gene56878 | 0.82091 | 5.34E-53 | -1.69E-46 |
| MS.gene050876 | MS.gene56878 | 0.838037 | 3.65E-57 | -1.69E-46 |
| MS.gene05087 | MS.gene56878 | 0.842804 | 2.07E-58 | -1.69E-46 |
| MS.gene050904 | MS.gene56878 | 0.833689 | 4.62E-56 | -1.69E-46 |
| MS.gene052482 | MS.gene56878 | 0.819557 | 1.09E-52 | -1.69E-46 |
| MS.gene052486 | MS.gene56878 | 0.825052 | 5.78E-54 | -1.69E-46 |
| MS.gene053286 | MS.gene56878 | 0.804373 | 2.23E-49 | -1.69E-46 |
| MS.gene054638 | MS.gene56878 | 0.844184 | 8.85E-59 | -1.69E-46 |
| MS.gene054954 | MS.gene56878 | 0.812702 | 3.71E-51 | -1.69E-46 |
| MS.gene055849 | MS.gene56878 | 0.827755 | 1.31E-54 | -1.69E-46 |
| MS.gene056409 | MS.gene56878 | 0.803469 | 3.43E-49 | -1.69E-46 |
| MS.gene056450 | MS.gene56878 | 0.808734 | 2.68E-50 | -1.69E-46 |
| MS.gene056504 | MS.gene56878 | 0.81231 | 4.52E-51 | -1.69E-46 |
| MS.gene056510 | MS.gene56878 | 0.81129 | 7.54E-51 | -1.69E-46 |
| MS.gene056610 | MS.gene56878 | 0.811208 | 7.85E-51 | -1.69E-46 |
| MS.gene056692 | MS.gene56878 | 0.802186 | 6.32E-49 | -1.69E-46 |
| MS.gene057684 | MS.gene56878 | 0.818221 | 2.20E-52 | -1.69E-46 |
| MS.gene057687 | MS.gene56878 | 0.808163 | 3.55E-50 | -1.69E-46 |
| MS.gene057872 | MS.gene56878 | 0.822081 | 2.87E-53 | -1.69E-46 |
| MS.gene058719 | MS.gene56878 | 0.823656 | 1.23E-53 | -1.69E-46 |
| MS.gene059837 | MS.gene56878 | 0.85041 | 1.73E-60 | -1.69E-46 |
| MS.gene060703 | MS.gene56878 | 0.821348 | 4.24E-53 | -1.69E-46 |
| MS.gene060762 | MS.gene56878 | 0.809213 | 2.11E-50 | -1.69E-46 |
| MS.gene06077 | MS.gene56878 | 0.816952 | 4.24E-52 | -1.69E-46 |
| MS.gene060982 | MS.gene56878 | 0.81376 | 2.17E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56878.t1 | MTR_4g106870 | 98.526 | 475 | 7 | 0 | 1 | 475 | 1 | 475 | 0.0 | 961 |
| MS.gene56878.t1 | MTR_8g012565 | 73.885 | 471 | 119 | 3 | 1 | 469 | 1 | 469 | 0.0 | 723 |
| MS.gene56878.t1 | MTR_8g012565 | 72.823 | 379 | 99 | 3 | 1 | 377 | 1 | 377 | 0.0 | 570 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56878.t1 | AT5G62790 | 82.180 | 477 | 82 | 2 | 1 | 475 | 2 | 477 | 0.0 | 787 |
| MS.gene56878.t1 | AT5G62790 | 78.514 | 498 | 83 | 3 | 1 | 475 | 1 | 497 | 0.0 | 776 |
Find 111 sgRNAs with CRISPR-Local
Find 289 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTGAAGCACATTACTTATT+TGG | 0.150895 | 8.1:-17648363 | MS.gene56878:CDS |
| CAAGTCTTGTTACCTAGTTC+TGG | 0.168286 | 8.1:+17650960 | None:intergenic |
| AAGAAAGAACCTGGGAATTT+AGG | 0.189751 | 8.1:+17651200 | None:intergenic |
| TGTTTCCAGGATTAGCTATT+TGG | 0.208608 | 8.1:-17647156 | MS.gene56878:intron |
| GGCAATTAGTGTCTCTTTAT+TGG | 0.216981 | 8.1:+17649210 | None:intergenic |
| CCAACAATGGAGATGGGTTT+AGG | 0.262635 | 8.1:+17650930 | None:intergenic |
| AAAACATCCCAACTGGAGTA+TGG | 0.276203 | 8.1:-17648520 | MS.gene56878:CDS |
| TTCATCTGTTCTTGCACAAT+TGG | 0.303753 | 8.1:-17648169 | MS.gene56878:CDS |
| TCATCTGTTCTTGCACAATT+GGG | 0.311960 | 8.1:-17648168 | MS.gene56878:CDS |
| GCTTTGAAAAGAAAAGAAAA+TGG | 0.329522 | 8.1:-17651062 | MS.gene56878:CDS |
| GCCTATGCTGCTGGCCGCGC+TGG | 0.330237 | 8.1:-17647856 | MS.gene56878:CDS |
| GCGACAACTCTAAACTTATC+TGG | 0.348351 | 8.1:+17650676 | None:intergenic |
| AAGTCTTGTTACCTAGTTCT+GGG | 0.362313 | 8.1:+17650961 | None:intergenic |
| CAACAATGGAGATGGGTTTA+GGG | 0.365991 | 8.1:+17650931 | None:intergenic |
| AGGATTGGCAAACGCATATC+AGG | 0.374634 | 8.1:+17648141 | None:intergenic |
| ATCTCCATTGTTGGATGCAC+TGG | 0.387654 | 8.1:-17650921 | MS.gene56878:CDS |
| GTTGGATGCACTGGTTCAAT+TGG | 0.415070 | 8.1:-17650912 | MS.gene56878:CDS |
| GCAAACTAGCAGCATATTCT+CGG | 0.421203 | 8.1:+17647036 | None:intergenic |
| ACATCTTTCAGTTTCTCAAC+AGG | 0.421238 | 8.1:+17648561 | None:intergenic |
| CAGGCCATGATAATGTATAA+AGG | 0.421244 | 8.1:+17648121 | None:intergenic |
| GATGGATACTTAATGTTGTC+AGG | 0.430692 | 8.1:+17647889 | None:intergenic |
| TCAATGACGCCTTGTTCTCC+CGG | 0.434922 | 8.1:+17650226 | None:intergenic |
| CAATCCTTTATACATTATCA+TGG | 0.441678 | 8.1:-17648125 | MS.gene56878:CDS |
| TCCAGCGCGGCCAGCAGCAT+AGG | 0.445154 | 8.1:+17647855 | None:intergenic |
| GTGACAACAGTGACTGCATC+CGG | 0.450389 | 8.1:+17650105 | None:intergenic |
| GATCAGTCTCATGCTAGAAC+AGG | 0.456977 | 8.1:+17646993 | None:intergenic |
| TGTTCTCCCGGGATGATCTC+CGG | 0.457319 | 8.1:+17650238 | None:intergenic |
| CGCGCTGGAGGAACCATGAC+AGG | 0.460029 | 8.1:-17647841 | MS.gene56878:CDS |
| CAGAACTAGGTAACAAGACT+TGG | 0.462516 | 8.1:-17650959 | MS.gene56878:CDS |
| ACAGTTGCGGCCATAGAAGC+TGG | 0.466883 | 8.1:-17649250 | MS.gene56878:CDS |
| ATTGCTCGTCCTGGCCATGC+TGG | 0.468681 | 8.1:+17650984 | None:intergenic |
| TATGCTGCTGGCCGCGCTGG+AGG | 0.470238 | 8.1:-17647853 | MS.gene56878:CDS |
| ATGCATTAAAACATCCCAAC+TGG | 0.473839 | 8.1:-17648527 | MS.gene56878:CDS |
| AGAGTTGTCGCACTTGCAGC+TGG | 0.474198 | 8.1:-17650664 | MS.gene56878:CDS |
| AAACATCCCAACTGGAGTAT+GGG | 0.476050 | 8.1:-17648519 | MS.gene56878:CDS |
| TTATTCGCTTCAGTGTATCC+AGG | 0.478906 | 8.1:-17648935 | MS.gene56878:intron |
| TCTCCTGCTGAACTTAAGTC+CGG | 0.482386 | 8.1:-17651260 | MS.gene56878:CDS |
| CCTAAACCCATCTCCATTGT+TGG | 0.482719 | 8.1:-17650930 | MS.gene56878:CDS |
| CATGATAATGTATAAAGGAT+TGG | 0.483281 | 8.1:+17648126 | None:intergenic |
| ATGAATCTTGCCTATGCTGC+TGG | 0.484349 | 8.1:-17647865 | MS.gene56878:CDS |
| GCTTCTATGGCCGCAACTGT+TGG | 0.486636 | 8.1:+17649253 | None:intergenic |
| TTCTCAGGTTGCACGTCACC+CGG | 0.488858 | 8.1:-17650124 | MS.gene56878:intron |
| CATCTGTTCTTGCACAATTG+GGG | 0.489816 | 8.1:-17648167 | MS.gene56878:CDS |
| AGCAGCATAGGCAAGATTCA+TGG | 0.491274 | 8.1:+17647867 | None:intergenic |
| AGCTGGAAAAGACATAGCTT+TGG | 0.491660 | 8.1:-17649233 | MS.gene56878:CDS |
| CGAGTCATTCTAACTGCATC+CGG | 0.492265 | 8.1:-17648889 | MS.gene56878:CDS |
| AATTATTCACTATGACTTGT+GGG | 0.496488 | 8.1:-17647060 | MS.gene56878:CDS |
| GGACCACCACCAGCATGGCC+AGG | 0.499057 | 8.1:-17650993 | MS.gene56878:CDS |
| CGGGCAAGAGGAAGGACAAA+AGG | 0.499562 | 8.1:+17649181 | None:intergenic |
| CGTCCTGGCCATGCTGGTGG+TGG | 0.499985 | 8.1:+17650990 | None:intergenic |
| TGTTCAGTGCAGTCAACATC+AGG | 0.504129 | 8.1:-17651014 | MS.gene56878:CDS |
| AGGAAGGACAAAAGGACCTC+CGG | 0.506111 | 8.1:+17649189 | None:intergenic |
| TCAGAACAATAGACTCTGTC+AGG | 0.507170 | 8.1:+17648102 | None:intergenic |
| AATAAAGAGACACTAATTGC+CGG | 0.508829 | 8.1:-17649208 | MS.gene56878:CDS |
| TATTCGCTTCAGTGTATCCA+GGG | 0.510358 | 8.1:-17648934 | MS.gene56878:intron |
| TACATACCTAAAAGCACCTC+CGG | 0.511346 | 8.1:+17648870 | None:intergenic |
| CGCTGCACTCCTAAATTCCC+AGG | 0.512687 | 8.1:-17651209 | MS.gene56878:intron |
| AGTAGGCTGTGCAGGACTAA+AGG | 0.515160 | 8.1:-17650076 | MS.gene56878:intron |
| AGTTCTGGGATTGCTCGTCC+TGG | 0.518603 | 8.1:+17650975 | None:intergenic |
| AAATTATTCACTATGACTTG+TGG | 0.522725 | 8.1:-17647061 | MS.gene56878:CDS |
| CATTACTCTTCTGATAGATC+AGG | 0.523314 | 8.1:-17650635 | MS.gene56878:intron |
| TTTCTAACAGCAACAAGTTG+TGG | 0.525340 | 8.1:+17650313 | None:intergenic |
| ATTGAATGTATGATTGATTG+TGG | 0.526824 | 8.1:+17648306 | None:intergenic |
| AGTGCAGCGGTTAGACTTGA+GGG | 0.531828 | 8.1:+17651223 | None:intergenic |
| ACGGGAATAGTAGGCTGTGC+AGG | 0.536835 | 8.1:-17650084 | MS.gene56878:CDS |
| GAGTGCAGCGGTTAGACTTG+AGG | 0.537742 | 8.1:+17651222 | None:intergenic |
| ACATTCAATGATTGAAACAC+AGG | 0.537807 | 8.1:-17648292 | MS.gene56878:intron |
| AGTGCATCCAACAATGGAGA+TGG | 0.538374 | 8.1:+17650923 | None:intergenic |
| AAACCGGACTTAAGTTCAGC+AGG | 0.538964 | 8.1:+17651257 | None:intergenic |
| ACTGTTGTCACGGGAATAGT+AGG | 0.538998 | 8.1:-17650093 | MS.gene56878:CDS |
| GAGATCATCCCGGGAGAACA+AGG | 0.540077 | 8.1:-17650235 | MS.gene56878:CDS |
| CTGTTCTTGCACAATTGGGG+TGG | 0.541920 | 8.1:-17648164 | MS.gene56878:CDS |
| GTGCACCCTCTGTTAACCCC+TGG | 0.548422 | 8.1:+17648917 | None:intergenic |
| GGACGAGCAATCCCAGAACT+AGG | 0.548767 | 8.1:-17650972 | MS.gene56878:CDS |
| CACTGGTTCAATTGGAACTC+AGG | 0.550266 | 8.1:-17650904 | MS.gene56878:intron |
| GATGCAGTCACTGTTGTCAC+GGG | 0.557100 | 8.1:-17650102 | MS.gene56878:CDS |
| GCTCGTCCTGGCCATGCTGG+TGG | 0.558823 | 8.1:+17650987 | None:intergenic |
| CAAACTAGCAGCATATTCTC+GGG | 0.558988 | 8.1:+17647037 | None:intergenic |
| CATAGTGAATAATTTCCTCA+AGG | 0.564756 | 8.1:+17647069 | None:intergenic |
| CAATGACGCCTTGTTCTCCC+GGG | 0.564820 | 8.1:+17650227 | None:intergenic |
| AACATCCCAACTGGAGTATG+GGG | 0.571896 | 8.1:-17648518 | MS.gene56878:CDS |
| GCAGAATGTTCGGAATCAGC+AGG | 0.577993 | 8.1:+17649136 | None:intergenic |
| GGATGCAGTCACTGTTGTCA+CGG | 0.582145 | 8.1:-17650103 | MS.gene56878:CDS |
| TATGCTTTCGGGCAAGAGGA+AGG | 0.582555 | 8.1:+17649173 | None:intergenic |
| TGCACTAAGAACACCTGTCA+TGG | 0.586245 | 8.1:+17647828 | None:intergenic |
| TCTATTGTTCTGAAGTCACT+TGG | 0.588552 | 8.1:-17648092 | MS.gene56878:CDS |
| ACGCTATGCTTTCGGGCAAG+AGG | 0.591332 | 8.1:+17649169 | None:intergenic |
| ATAGTGAATAATTTCCTCAA+GGG | 0.592245 | 8.1:+17647070 | None:intergenic |
| GTTGACCTCACCTTCCCTTG+AGG | 0.594034 | 8.1:-17647084 | MS.gene56878:CDS |
| GTGCATCCAACAATGGAGAT+GGG | 0.598895 | 8.1:+17650924 | None:intergenic |
| CTAGGTAACAAGACTTGGGA+AGG | 0.608965 | 8.1:-17650954 | MS.gene56878:CDS |
| TGACAACAGTGACTGCATCC+GGG | 0.616685 | 8.1:+17650106 | None:intergenic |
| TGAACCAGTGCATCCAACAA+TGG | 0.621489 | 8.1:+17650917 | None:intergenic |
| TGAATAATTTCCTCAAGGGA+AGG | 0.623968 | 8.1:+17647074 | None:intergenic |
| AATTTCCTCAAGGGAAGGTG+AGG | 0.628083 | 8.1:+17647079 | None:intergenic |
| GCATAGGCAAGATTCATGGA+TGG | 0.630920 | 8.1:+17647871 | None:intergenic |
| GGTTAACAGAGGGTGCACTT+AGG | 0.633566 | 8.1:-17648912 | MS.gene56878:CDS |
| AGAACTAGGTAACAAGACTT+GGG | 0.640590 | 8.1:-17650958 | MS.gene56878:CDS |
| TGTATCCAGGGGTTAACAGA+GGG | 0.641373 | 8.1:-17648922 | MS.gene56878:CDS |
| CTGGGAATTTAGGAGTGCAG+CGG | 0.643916 | 8.1:+17651210 | None:intergenic |
| CATCAGGACCACCACCAGCA+TGG | 0.651055 | 8.1:-17650998 | MS.gene56878:CDS |
| ATTCGCTTCAGTGTATCCAG+GGG | 0.653376 | 8.1:-17648933 | MS.gene56878:intron |
| GTGCAGCGGTTAGACTTGAG+GGG | 0.671763 | 8.1:+17651224 | None:intergenic |
| GTCATTCTAACTGCATCCGG+AGG | 0.671792 | 8.1:-17648886 | MS.gene56878:CDS |
| TGCAGCGGTTAGACTTGAGG+GGG | 0.676580 | 8.1:+17651225 | None:intergenic |
| GGGAGAACAAGGCGTCATTG+AGG | 0.682410 | 8.1:-17650224 | MS.gene56878:intron |
| GTGTATCCAGGGGTTAACAG+AGG | 0.688037 | 8.1:-17648923 | MS.gene56878:CDS |
| CTGTCATGGTTCCTCCAGCG+CGG | 0.688289 | 8.1:+17647842 | None:intergenic |
| GTAGACACTAGATATTGTCG+CGG | 0.698614 | 8.1:-17650704 | MS.gene56878:intron |
| AAAGAGACACTAATTGCCGG+AGG | 0.715097 | 8.1:-17649205 | MS.gene56878:CDS |
| TACTTGCAAAGATCAAGACG+AGG | 0.743866 | 8.1:+17648069 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGATAGTTAAAATAATAAAA+AGG | - | chr8.1:17650783-17650802 | MS.gene56878:intron | 10.0% |
| !! | TTTAATAAAAAAGATATTAG+AGG | + | chr8.1:17649276-17649295 | None:intergenic | 10.0% |
| !! | ATTTAATGATTATCAAAAGA+CGG | + | chr8.1:17650043-17650062 | None:intergenic | 15.0% |
| !! | GTTAAAATAATAAAAAGGAT+TGG | - | chr8.1:17650788-17650807 | MS.gene56878:intron | 15.0% |
| !! | TACTAATATATTGCTTATAA+TGG | - | chr8.1:17648625-17648644 | MS.gene56878:intron | 15.0% |
| !! | TTAATTAATTGTATGGTTTA+AGG | - | chr8.1:17647848-17647867 | MS.gene56878:CDS | 15.0% |
| !!! | TTAATTATTTTTTCCTTTCT+AGG | - | chr8.1:17650086-17650105 | MS.gene56878:CDS | 15.0% |
| !!! | TTCATAATCATTTGATTTTT+AGG | - | chr8.1:17647187-17647206 | MS.gene56878:intron | 15.0% |
| !!! | TTTGAAGTTAATTAATTGTA+TGG | - | chr8.1:17647841-17647860 | MS.gene56878:CDS | 15.0% |
| !! | AACAAATTTACTATATACTC+GGG | + | chr8.1:17649869-17649888 | None:intergenic | 20.0% |
| !! | ATATTTCACATATTATACTC+TGG | - | chr8.1:17649250-17649269 | MS.gene56878:CDS | 20.0% |
| !! | CAATTCAAAATTTGATTACA+TGG | + | chr8.1:17647687-17647706 | None:intergenic | 20.0% |
| !! | GAACAAATTTACTATATACT+CGG | + | chr8.1:17649870-17649889 | None:intergenic | 20.0% |
| !! | GCAAGTTATATATATATATG+AGG | + | chr8.1:17650825-17650844 | None:intergenic | 20.0% |
| !! | TCACAAAAAAAAAAACATCA+TGG | + | chr8.1:17647124-17647143 | None:intergenic | 20.0% |
| !! | TCATTAAATCCACATTTAAT+TGG | - | chr8.1:17651091-17651110 | MS.gene56878:intron | 20.0% |
| !! | TGGTAAAAATCAAAGTAATA+TGG | + | chr8.1:17650913-17650932 | None:intergenic | 20.0% |
| !! | TTAAAAACTTTGTATTTGCA+TGG | + | chr8.1:17650666-17650685 | None:intergenic | 20.0% |
| !! | TTATTACATGTAAAATTGCA+AGG | - | chr8.1:17648507-17648526 | MS.gene56878:CDS | 20.0% |
| !! | TTCTATTAATAAATGAAGCA+GGG | + | chr8.1:17649318-17649337 | None:intergenic | 20.0% |
| !! | TTTCTATTAATAAATGAAGC+AGG | + | chr8.1:17649319-17649338 | None:intergenic | 20.0% |
| !!! | ACCAGTCTTATTTTTATATT+AGG | - | chr8.1:17648537-17648556 | MS.gene56878:CDS | 20.0% |
| !!! | ATAATCATTTGATTTTTAGG+TGG | - | chr8.1:17647190-17647209 | MS.gene56878:intron | 20.0% |
| !!! | ATATTTATTAGCATTTGTTG+TGG | - | chr8.1:17650865-17650884 | MS.gene56878:intron | 20.0% |
| !!! | CCAGTCTTATTTTTATATTA+GGG | - | chr8.1:17648538-17648557 | MS.gene56878:CDS | 20.0% |
| !!! | GTTTTGTTTTTTATTTGACT+CGG | + | chr8.1:17648435-17648454 | None:intergenic | 20.0% |
| !!! | TAATAAAAAGGATTGGTTAT+TGG | - | chr8.1:17650795-17650814 | MS.gene56878:intron | 20.0% |
| !!! | TATTTTAACTATCAGTATGA+AGG | + | chr8.1:17650777-17650796 | None:intergenic | 20.0% |
| !!! | TTATCTTTTCTGAAATGAAA+AGG | - | chr8.1:17649501-17649520 | MS.gene56878:intron | 20.0% |
| ! | AAAAACATCATGGTACATAA+TGG | + | chr8.1:17647114-17647133 | None:intergenic | 25.0% |
| ! | AAATTATTCACTATGACTTG+TGG | - | chr8.1:17651218-17651237 | MS.gene56878:CDS | 25.0% |
| ! | AATATTCAGCACAATTCTTA+GGG | + | chr8.1:17650559-17650578 | None:intergenic | 25.0% |
| ! | ACATTGAAGGACTAATTTAA+CGG | - | chr8.1:17648773-17648792 | MS.gene56878:intron | 25.0% |
| ! | ATAGTGAATAATTTCCTCAA+GGG | + | chr8.1:17651212-17651231 | None:intergenic | 25.0% |
| ! | ATTCTTTACTTCACAATTTG+TGG | + | chr8.1:17648590-17648609 | None:intergenic | 25.0% |
| ! | ATTGAAGCACATTACTTATT+TGG | - | chr8.1:17649916-17649935 | MS.gene56878:intron | 25.0% |
| ! | ATTGAATGTATGATTGATTG+TGG | + | chr8.1:17649976-17649995 | None:intergenic | 25.0% |
| ! | CAATCCTTTATACATTATCA+TGG | - | chr8.1:17650154-17650173 | MS.gene56878:intron | 25.0% |
| ! | CCCTAATATAAAAATAAGAC+TGG | + | chr8.1:17648541-17648560 | None:intergenic | 25.0% |
| ! | GCAAAATAACCAATTAAATG+TGG | + | chr8.1:17651103-17651122 | None:intergenic | 25.0% |
| ! | TAGCTTATGAAAAACGATAT+TGG | + | chr8.1:17648124-17648143 | None:intergenic | 25.0% |
| ! | TCCATCATGATATGAAAAAT+TGG | + | chr8.1:17649588-17649607 | None:intergenic | 25.0% |
| ! | TCTACAACAAAACTAAGAAA+GGG | + | chr8.1:17649641-17649660 | None:intergenic | 25.0% |
| ! | TCTATTAATAAATGAAGCAG+GGG | + | chr8.1:17649317-17649336 | None:intergenic | 25.0% |
| ! | TTGGCTAATAAAAAAATGAG+AGG | + | chr8.1:17649010-17649029 | None:intergenic | 25.0% |
| !! | AATTATTCACTATGACTTGT+GGG | - | chr8.1:17651219-17651238 | MS.gene56878:CDS | 25.0% |
| !! | ATTTTCTTCAGTATGAACTA+TGG | + | chr8.1:17650262-17650281 | None:intergenic | 25.0% |
| !! | CATGATAATGTATAAAGGAT+TGG | + | chr8.1:17650156-17650175 | None:intergenic | 25.0% |
| !! | GTTTCTGTTTTCTTAAAACT+CGG | - | chr8.1:17647729-17647748 | MS.gene56878:intron | 25.0% |
| !! | TAGCTATTTGGATATTTTCA+AGG | - | chr8.1:17651135-17651154 | MS.gene56878:intron | 25.0% |
| !! | TTTCTGTTTTCTTAAAACTC+GGG | - | chr8.1:17647730-17647749 | MS.gene56878:intron | 25.0% |
| !!! | AGTTTTAAGAAAACAGAAAC+TGG | + | chr8.1:17647729-17647748 | None:intergenic | 25.0% |
| !!! | ATTTGTTCTACTTATTTTGC+AGG | - | chr8.1:17649882-17649901 | MS.gene56878:intron | 25.0% |
| !!! | GCTTTGAAAAGAAAAGAAAA+TGG | - | chr8.1:17647217-17647236 | MS.gene56878:intron | 25.0% |
| !!! | GGAAGTAAAACTTATTTTGA+AGG | + | chr8.1:17650616-17650635 | None:intergenic | 25.0% |
| !!! | TTTGTTCTACTTATTTTGCA+GGG | - | chr8.1:17649883-17649902 | MS.gene56878:intron | 25.0% |
| AAAAAGAAGCAACTGAACAT+GGG | + | chr8.1:17649468-17649487 | None:intergenic | 30.0% | |
| AAACATCAATGATAACAACC+AGG | - | chr8.1:17648477-17648496 | MS.gene56878:intron | 30.0% | |
| AACTAAGAAAGGGAAATTCA+AGG | + | chr8.1:17649631-17649650 | None:intergenic | 30.0% | |
| AACTATGGAAACGAAATTAG+GGG | + | chr8.1:17650247-17650266 | None:intergenic | 30.0% | |
| AATAAAGAGACACTAATTGC+CGG | - | chr8.1:17649071-17649090 | MS.gene56878:intron | 30.0% | |
| AATATCCAAATAGCTAATCC+TGG | + | chr8.1:17651131-17651150 | None:intergenic | 30.0% | |
| AATTGAATAGATGACAGGAA+AGG | - | chr8.1:17647471-17647490 | MS.gene56878:intron | 30.0% | |
| ACAAAAGAGAGTCGAAAAAA+GGG | + | chr8.1:17648240-17648259 | None:intergenic | 30.0% | |
| ACAGTCATGTAGATCATATA+GGG | + | chr8.1:17649664-17649683 | None:intergenic | 30.0% | |
| ACATGTAATAAGATAAGACC+TGG | + | chr8.1:17648498-17648517 | None:intergenic | 30.0% | |
| ACATTCAATGATTGAAACAC+AGG | - | chr8.1:17649987-17650006 | MS.gene56878:intron | 30.0% | |
| ATCAGCAAAATAGACATTGA+AGG | - | chr8.1:17648760-17648779 | MS.gene56878:intron | 30.0% | |
| CAATATTCAGCACAATTCTT+AGG | + | chr8.1:17650560-17650579 | None:intergenic | 30.0% | |
| CATAGTGAATAATTTCCTCA+AGG | + | chr8.1:17651213-17651232 | None:intergenic | 30.0% | |
| CTGAAAAATAGCAGAATGTT+CGG | + | chr8.1:17649156-17649175 | None:intergenic | 30.0% | |
| GAAAGATGTTGAACAAAAAC+CGG | - | chr8.1:17648022-17648041 | MS.gene56878:intron | 30.0% | |
| GAAATGAAAAGGAACCAAAA+GGG | - | chr8.1:17649512-17649531 | MS.gene56878:intron | 30.0% | |
| GAACTATGGAAACGAAATTA+GGG | + | chr8.1:17650248-17650267 | None:intergenic | 30.0% | |
| GCATATTCACATTTCAAACA+TGG | + | chr8.1:17650343-17650362 | None:intergenic | 30.0% | |
| GGGAAAAAAGATTAATCTCT+TGG | - | chr8.1:17647912-17647931 | MS.gene56878:CDS | 30.0% | |
| GTATGTAAAATAAACCTGAG+TGG | - | chr8.1:17649425-17649444 | MS.gene56878:intron | 30.0% | |
| GTCTACAACAAAACTAAGAA+AGG | + | chr8.1:17649642-17649661 | None:intergenic | 30.0% | |
| GTTTCGCTTCATGATTAATA+GGG | - | chr8.1:17649690-17649709 | MS.gene56878:intron | 30.0% | |
| TAAAAAGAAGCAACTGAACA+TGG | + | chr8.1:17649469-17649488 | None:intergenic | 30.0% | |
| TAACGGCTAAATGAATGTTT+GGG | - | chr8.1:17648790-17648809 | MS.gene56878:intron | 30.0% | |
| TACAAAAGAGAGTCGAAAAA+AGG | + | chr8.1:17648241-17648260 | None:intergenic | 30.0% | |
| TACAGTCATGTAGATCATAT+AGG | + | chr8.1:17649665-17649684 | None:intergenic | 30.0% | |
| TCTTGGTATTTATGTTACAC+AGG | - | chr8.1:17647929-17647948 | MS.gene56878:intron | 30.0% | |
| TGAAATGAAAAGGAACCAAA+AGG | - | chr8.1:17649511-17649530 | MS.gene56878:intron | 30.0% | |
| TGAACTATGGAAACGAAATT+AGG | + | chr8.1:17650249-17650268 | None:intergenic | 30.0% | |
| TGAACTTGGTCATTAAATGT+TGG | - | chr8.1:17648659-17648678 | MS.gene56878:intron | 30.0% | |
| TGTTTCGCTTCATGATTAAT+AGG | - | chr8.1:17649689-17649708 | MS.gene56878:intron | 30.0% | |
| TTAACGGCTAAATGAATGTT+TGG | - | chr8.1:17648789-17648808 | MS.gene56878:intron | 30.0% | |
| TTAAGAAAACAGAAACTGGA+AGG | + | chr8.1:17647725-17647744 | None:intergenic | 30.0% | |
| TTCACACATTACAAACCTTT+GGG | - | chr8.1:17648728-17648747 | MS.gene56878:intron | 30.0% | |
| TTGAATATACTACCAACTGT+GGG | - | chr8.1:17647892-17647911 | MS.gene56878:CDS | 30.0% | |
| TTTCTGTACAAGAAACTTCA+AGG | + | chr8.1:17647796-17647815 | None:intergenic | 30.0% | |
| TTTGAATATACTACCAACTG+TGG | - | chr8.1:17647891-17647910 | MS.gene56878:CDS | 30.0% | |
| ! | AACCTTGAATGTGTCTTTTT+CGG | - | chr8.1:17648696-17648715 | MS.gene56878:intron | 30.0% |
| ! | GCCAATTTTTCATATCATGA+TGG | - | chr8.1:17649584-17649603 | MS.gene56878:intron | 30.0% |
| ! | TCAGTTGCTTCTTTTTATGT+TGG | - | chr8.1:17649472-17649491 | MS.gene56878:intron | 30.0% |
| ! | TGAAAATGAGTCGGTATTTT+GGG | + | chr8.1:17650691-17650710 | None:intergenic | 30.0% |
| ! | TGTTTGAAATGTGAATATGC+AGG | - | chr8.1:17650343-17650362 | MS.gene56878:intron | 30.0% |
| ! | TTTTTATTAGCCAACAGTTG+CGG | - | chr8.1:17649016-17649035 | MS.gene56878:intron | 30.0% |
| !! | CACAAATCCATTTTAAAGAG+AGG | + | chr8.1:17647437-17647456 | None:intergenic | 30.0% |
| !! | CATTCTAAAGCATTTAGGAT+GGG | - | chr8.1:17647755-17647774 | MS.gene56878:intron | 30.0% |
| !! | GTATTTTTACGCTATGCTTT+CGG | + | chr8.1:17649121-17649140 | None:intergenic | 30.0% |
| !! | TATTTTTACGCTATGCTTTC+GGG | + | chr8.1:17649120-17649139 | None:intergenic | 30.0% |
| !! | TCATTCTAAAGCATTTAGGA+TGG | - | chr8.1:17647754-17647773 | MS.gene56878:intron | 30.0% |
| !! | TTTGGATATTTTCAAGGTTG+TGG | - | chr8.1:17651141-17651160 | MS.gene56878:intron | 30.0% |
| !!! | TGGATTTGTGTTGTTTTTTG+TGG | - | chr8.1:17647447-17647466 | MS.gene56878:intron | 30.0% |
| !!! | TTAATCTTTTTTCCCACAGT+TGG | + | chr8.1:17647907-17647926 | None:intergenic | 30.0% |
| AACCGAAAAAGACACATTCA+AGG | + | chr8.1:17648701-17648720 | None:intergenic | 35.0% | |
| AACGGCTAAATGAATGTTTG+GGG | - | chr8.1:17648791-17648810 | MS.gene56878:intron | 35.0% | |
| AACTTGCATCTGTATTCAGT+AGG | - | chr8.1:17650838-17650857 | MS.gene56878:intron | 35.0% | |
| AAGAAAGAACCTGGGAATTT+AGG | + | chr8.1:17647082-17647101 | None:intergenic | 35.0% | |
| AATTATCTCGAGGTTATGGT+GGG | + | chr8.1:17650641-17650660 | None:intergenic | 35.0% | |
| ACATCTTTCAGTTTCTCAAC+AGG | + | chr8.1:17649721-17649740 | None:intergenic | 35.0% | |
| ACTATGGAAACGAAATTAGG+GGG | + | chr8.1:17650246-17650265 | None:intergenic | 35.0% | |
| ACTTGCATCTGTATTCAGTA+GGG | - | chr8.1:17650839-17650858 | MS.gene56878:intron | 35.0% | |
| AGAACAGATGAATCCTAGAA+AGG | + | chr8.1:17650102-17650121 | None:intergenic | 35.0% | |
| AGAACTAGGTAACAAGACTT+GGG | - | chr8.1:17647321-17647340 | MS.gene56878:intron | 35.0% | |
| AGCCAACACAACATAGTATA+AGG | + | chr8.1:17650019-17650038 | None:intergenic | 35.0% | |
| AGTGTCTACAAAACCATACA+GGG | + | chr8.1:17647564-17647583 | None:intergenic | 35.0% | |
| ATGACCAAGTTCATGCAATA+TGG | + | chr8.1:17648652-17648671 | None:intergenic | 35.0% | |
| ATGCATTAAAACATCCCAAC+TGG | - | chr8.1:17649752-17649771 | MS.gene56878:intron | 35.0% | |
| CAGTCATAATAGTACACGAA+TGG | + | chr8.1:17648849-17648868 | None:intergenic | 35.0% | |
| CATTACTCTTCTGATAGATC+AGG | - | chr8.1:17647644-17647663 | MS.gene56878:intron | 35.0% | |
| CTTTGTGAAAGCAAGATTCT+GGG | + | chr8.1:17650744-17650763 | None:intergenic | 35.0% | |
| GAAAATAGACAGATTCACCT+AGG | - | chr8.1:17650276-17650295 | MS.gene56878:CDS | 35.0% | |
| GACCTTATACTATGTTGTGT+TGG | - | chr8.1:17650014-17650033 | MS.gene56878:intron | 35.0% | |
| GATGGATACTTAATGTTGTC+AGG | + | chr8.1:17650393-17650412 | None:intergenic | 35.0% | |
| GCTATTGTTTGTGTATTCTC+AGG | - | chr8.1:17648140-17648159 | MS.gene56878:CDS | 35.0% | |
| GCTTCATGATTAATAGGGAT+TGG | - | chr8.1:17649695-17649714 | MS.gene56878:intron | 35.0% | |
| GGATAATTATCTCGAGGTTA+TGG | + | chr8.1:17650645-17650664 | None:intergenic | 35.0% | |
| GGCAATTAGTGTCTCTTTAT+TGG | + | chr8.1:17649072-17649091 | None:intergenic | 35.0% | |
| GTAATATGGCCACACAATTA+AGG | + | chr8.1:17650899-17650918 | None:intergenic | 35.0% | |
| GTAGTGAACTATAGATACTC+TGG | - | chr8.1:17649222-17649241 | MS.gene56878:CDS | 35.0% | |
| GTCTTGAATCCTTAATTGTG+TGG | - | chr8.1:17650887-17650906 | MS.gene56878:intron | 35.0% | |
| GTGGTAATTGAATAGATGAC+AGG | - | chr8.1:17647466-17647485 | MS.gene56878:intron | 35.0% | |
| GTGTACTATTATGACTGATG+TGG | - | chr8.1:17648852-17648871 | MS.gene56878:intron | 35.0% | |
| GTTCACACATTACAAACCTT+TGG | - | chr8.1:17648727-17648746 | MS.gene56878:intron | 35.0% | |
| TAATTATCTCGAGGTTATGG+TGG | + | chr8.1:17650642-17650661 | None:intergenic | 35.0% | |
| TAGTGTCTACAAAACCATAC+AGG | + | chr8.1:17647565-17647584 | None:intergenic | 35.0% | |
| TATGGGGAAAAAGATAACTG+TGG | - | chr8.1:17649777-17649796 | MS.gene56878:intron | 35.0% | |
| TCACAAACCTGAAAATGAGT+CGG | + | chr8.1:17650700-17650719 | None:intergenic | 35.0% | |
| TCATCTGTTCTTGCACAATT+GGG | - | chr8.1:17650111-17650130 | MS.gene56878:CDS | 35.0% | |
| TGAATAATTTCCTCAAGGGA+AGG | + | chr8.1:17651208-17651227 | None:intergenic | 35.0% | |
| TGACCAAGTTCATGCAATAT+GGG | + | chr8.1:17648651-17648670 | None:intergenic | 35.0% | |
| TGTCAATTTGAAAAAGGAGC+CGG | + | chr8.1:17651036-17651055 | None:intergenic | 35.0% | |
| TTCATCTGTTCTTGCACAAT+TGG | - | chr8.1:17650110-17650129 | MS.gene56878:CDS | 35.0% | |
| TTGCATGGATAATTATCTCG+AGG | + | chr8.1:17650651-17650670 | None:intergenic | 35.0% | |
| TTTCTAACAGCAACAAGTTG+TGG | + | chr8.1:17647969-17647988 | None:intergenic | 35.0% | |
| ! | ATGTATCATTTTCCCCTGTA+TGG | - | chr8.1:17647548-17647567 | MS.gene56878:intron | 35.0% |
| ! | CAGGCCATGATAATGTATAA+AGG | + | chr8.1:17650161-17650180 | None:intergenic | 35.0% |
| ! | CTGAAAATGAGTCGGTATTT+TGG | + | chr8.1:17650692-17650711 | None:intergenic | 35.0% |
| ! | GAGCACTGTCAATTTGAAAA+AGG | + | chr8.1:17651042-17651061 | None:intergenic | 35.0% |
| ! | TATGTCTTTTCCAGCTTCTA+TGG | + | chr8.1:17649042-17649061 | None:intergenic | 35.0% |
| ! | TGTAAAGAACTGAAAAGTGC+TGG | + | chr8.1:17650933-17650952 | None:intergenic | 35.0% |
| !! | AAGTCTTGTTACCTAGTTCT+GGG | + | chr8.1:17647321-17647340 | None:intergenic | 35.0% |
| !! | CTCTGCTACACTTTTTAACA+AGG | - | chr8.1:17649801-17649820 | MS.gene56878:intron | 35.0% |
| !! | GGGTTCATTCTAAAGCATTT+AGG | - | chr8.1:17647750-17647769 | MS.gene56878:intron | 35.0% |
| !! | TAGGGCATTGATAGTTTGAA+AGG | - | chr8.1:17648556-17648575 | MS.gene56878:CDS | 35.0% |
| !! | TCTATTGTTCTGAAGTCACT+TGG | - | chr8.1:17650187-17650206 | MS.gene56878:intron | 35.0% |
| !! | TGTTTCCAGGATTAGCTATT+TGG | - | chr8.1:17651123-17651142 | MS.gene56878:intron | 35.0% |
| !!! | CAAAATACCGACTCATTTTC+AGG | - | chr8.1:17650690-17650709 | MS.gene56878:CDS | 35.0% |
| !!! | CGAACATTCTGCTATTTTTC+AGG | - | chr8.1:17649154-17649173 | MS.gene56878:CDS | 35.0% |
| !!! | GTTGGGATGTTTTAATGCAT+CGG | + | chr8.1:17649752-17649771 | None:intergenic | 35.0% |
| !!! | TTGGTTATTTTGCTGTTTCC+AGG | - | chr8.1:17651110-17651129 | MS.gene56878:intron | 35.0% |
| AAAACATCCCAACTGGAGTA+TGG | - | chr8.1:17649759-17649778 | MS.gene56878:intron | 40.0% | |
| AAACATCCCAACTGGAGTAT+GGG | - | chr8.1:17649760-17649779 | MS.gene56878:intron | 40.0% | |
| ACTGAAGAGAAGAAAGAACC+TGG | + | chr8.1:17647091-17647110 | None:intergenic | 40.0% | |
| ACTGCAAAAACTCTATGCCT+AGG | + | chr8.1:17650296-17650315 | None:intergenic | 40.0% | |
| AGCCTAAAACCTATGAAGCA+TGG | + | chr8.1:17651064-17651083 | None:intergenic | 40.0% | |
| AGCTGGAAAAGACATAGCTT+TGG | - | chr8.1:17649046-17649065 | MS.gene56878:intron | 40.0% | |
| AGGAACCAAAAGGGAATGTA+TGG | - | chr8.1:17649521-17649540 | MS.gene56878:intron | 40.0% | |
| CAAACTAGCAGCATATTCTC+GGG | + | chr8.1:17651245-17651264 | None:intergenic | 40.0% | |
| CAGAACTAGGTAACAAGACT+TGG | - | chr8.1:17647320-17647339 | MS.gene56878:intron | 40.0% | |
| CATCTGTTCTTGCACAATTG+GGG | - | chr8.1:17650112-17650131 | MS.gene56878:CDS | 40.0% | |
| CCAAGCAAAACATGACCATT+AGG | - | chr8.1:17650966-17650985 | MS.gene56878:CDS | 40.0% | |
| CGTCTTGATCTTTGCAAGTA+CGG | - | chr8.1:17650213-17650232 | MS.gene56878:intron | 40.0% | |
| CTGAAGAGAAGAAAGAACCT+GGG | + | chr8.1:17647090-17647109 | None:intergenic | 40.0% | |
| GAAATGTGAATATGCAGGCT+TGG | - | chr8.1:17650348-17650367 | MS.gene56878:intron | 40.0% | |
| GACAGAAAATCAAACATCGC+AGG | + | chr8.1:17647513-17647532 | None:intergenic | 40.0% | |
| GACTGATGTGGTATCTTTCA+AGG | - | chr8.1:17648864-17648883 | MS.gene56878:intron | 40.0% | |
| GAGTCGAAAAAAGGGAAAAG+AGG | + | chr8.1:17648232-17648251 | None:intergenic | 40.0% | |
| GCAAACTAGCAGCATATTCT+CGG | + | chr8.1:17651246-17651265 | None:intergenic | 40.0% | |
| GCGACAACTCTAAACTTATC+TGG | + | chr8.1:17647606-17647625 | None:intergenic | 40.0% | |
| GCTGATTGAATTAGTCCCAA+AGG | + | chr8.1:17648746-17648765 | None:intergenic | 40.0% | |
| GCTTTGTGAAAGCAAGATTC+TGG | + | chr8.1:17650745-17650764 | None:intergenic | 40.0% | |
| GTAGACACTAGATATTGTCG+CGG | - | chr8.1:17647575-17647594 | MS.gene56878:intron | 40.0% | |
| GTCAATTTGAAAAAGGAGCC+GGG | + | chr8.1:17651035-17651054 | None:intergenic | 40.0% | |
| GTGTCTACAAAACCATACAG+GGG | + | chr8.1:17647563-17647582 | None:intergenic | 40.0% | |
| TACTTGCAAAGATCAAGACG+AGG | + | chr8.1:17650213-17650232 | None:intergenic | 40.0% | |
| TATTCGCTTCAGTGTATCCA+GGG | - | chr8.1:17649345-17649364 | MS.gene56878:intron | 40.0% | |
| TCAGAACAATAGACTCTGTC+AGG | + | chr8.1:17650180-17650199 | None:intergenic | 40.0% | |
| TTATTCGCTTCAGTGTATCC+AGG | - | chr8.1:17649344-17649363 | MS.gene56878:intron | 40.0% | |
| ! | AAGATTCTGGGAGAGTCAAA+TGG | + | chr8.1:17650732-17650751 | None:intergenic | 40.0% |
| ! | CAACAATGGAGATGGGTTTA+GGG | + | chr8.1:17647351-17647370 | None:intergenic | 40.0% |
| ! | CAAGGTTTTCCACGATCAAT+GGG | + | chr8.1:17649613-17649632 | None:intergenic | 40.0% |
| ! | CCTAATGGTCATGTTTTGCT+TGG | + | chr8.1:17650969-17650988 | None:intergenic | 40.0% |
| ! | CTCCATGCTTCATAGGTTTT+AGG | - | chr8.1:17651059-17651078 | MS.gene56878:CDS | 40.0% |
| ! | CTGCAGTCCTCTCTTTAAAA+TGG | - | chr8.1:17647427-17647446 | MS.gene56878:intron | 40.0% |
| ! | TCAAGGTTTTCCACGATCAA+TGG | + | chr8.1:17649614-17649633 | None:intergenic | 40.0% |
| ! | TTTTTCCCCATACTCCAGTT+GGG | + | chr8.1:17649769-17649788 | None:intergenic | 40.0% |
| !! | CAAGTCTTGTTACCTAGTTC+TGG | + | chr8.1:17647322-17647341 | None:intergenic | 40.0% |
| !! | TACATACCTAAAAGCACCTC+CGG | + | chr8.1:17649412-17649431 | None:intergenic | 40.0% |
| AAACCGGACTTAAGTTCAGC+AGG | + | chr8.1:17647025-17647044 | None:intergenic | 45.0% | |
| AAAGAGACACTAATTGCCGG+AGG | - | chr8.1:17649074-17649093 | MS.gene56878:intron | 45.0% | |
| AACATCCCAACTGGAGTATG+GGG | - | chr8.1:17649761-17649780 | MS.gene56878:intron | 45.0% | |
| AATTTCCTCAAGGGAAGGTG+AGG | + | chr8.1:17651203-17651222 | None:intergenic | 45.0% | |
| ACAAAAACCGGAGATCATCC+CGG | - | chr8.1:17648034-17648053 | MS.gene56878:intron | 45.0% | |
| ACTGTTGTCACGGGAATAGT+AGG | - | chr8.1:17648186-17648205 | MS.gene56878:intron | 45.0% | |
| AGCAACTGAACATGGGAAAC+AGG | + | chr8.1:17649461-17649480 | None:intergenic | 45.0% | |
| AGCAGCATAGGCAAGATTCA+TGG | + | chr8.1:17650415-17650434 | None:intergenic | 45.0% | |
| AGTGCATCCAACAATGGAGA+TGG | + | chr8.1:17647359-17647378 | None:intergenic | 45.0% | |
| ATCTCCATTGTTGGATGCAC+TGG | - | chr8.1:17647358-17647377 | MS.gene56878:intron | 45.0% | |
| ATGAATCTTGCCTATGCTGC+TGG | - | chr8.1:17650414-17650433 | MS.gene56878:intron | 45.0% | |
| ATTCGCTTCAGTGTATCCAG+GGG | - | chr8.1:17649346-17649365 | MS.gene56878:intron | 45.0% | |
| CCTAAACCCATCTCCATTGT+TGG | - | chr8.1:17647349-17647368 | MS.gene56878:intron | 45.0% | |
| CGAGTCATTCTAACTGCATC+CGG | - | chr8.1:17649390-17649409 | MS.gene56878:intron | 45.0% | |
| CTAGGTAACAAGACTTGGGA+AGG | - | chr8.1:17647325-17647344 | MS.gene56878:intron | 45.0% | |
| GCATAGGCAAGATTCATGGA+TGG | + | chr8.1:17650411-17650430 | None:intergenic | 45.0% | |
| GTGCATCCAACAATGGAGAT+GGG | + | chr8.1:17647358-17647377 | None:intergenic | 45.0% | |
| TCTCCTGCTGAACTTAAGTC+CGG | - | chr8.1:17647019-17647038 | MS.gene56878:CDS | 45.0% | |
| TGAACCAGTGCATCCAACAA+TGG | + | chr8.1:17647365-17647384 | None:intergenic | 45.0% | |
| TGATGGAAACCCATTGATCG+TGG | - | chr8.1:17649601-17649620 | MS.gene56878:intron | 45.0% | |
| TGCACTAAGAACACCTGTCA+TGG | + | chr8.1:17650454-17650473 | None:intergenic | 45.0% | |
| TGCATCTGTATTCAGTAGGG+TGG | - | chr8.1:17650842-17650861 | MS.gene56878:intron | 45.0% | |
| TGGCCCATATTGCATGAACT+TGG | - | chr8.1:17648645-17648664 | MS.gene56878:intron | 45.0% | |
| TGTATCCAGGGGTTAACAGA+GGG | - | chr8.1:17649357-17649376 | MS.gene56878:intron | 45.0% | |
| TGTTCAGTGCAGTCAACATC+AGG | - | chr8.1:17647265-17647284 | MS.gene56878:intron | 45.0% | |
| ! | AGGATTGGCAAACGCATATC+AGG | + | chr8.1:17650141-17650160 | None:intergenic | 45.0% |
| ! | CCAACAATGGAGATGGGTTT+AGG | + | chr8.1:17647352-17647371 | None:intergenic | 45.0% |
| ! | CTTTTTCCCCATACTCCAGT+TGG | + | chr8.1:17649770-17649789 | None:intergenic | 45.0% |
| ! | GTGTGCCATACATTCCCTTT+TGG | + | chr8.1:17649529-17649548 | None:intergenic | 45.0% |
| !! | CACTGGTTCAATTGGAACTC+AGG | - | chr8.1:17647375-17647394 | MS.gene56878:intron | 45.0% |
| !! | GTTGGATGCACTGGTTCAAT+TGG | - | chr8.1:17647367-17647386 | MS.gene56878:intron | 45.0% |
| AGGAAGGACAAAAGGACCTC+CGG | + | chr8.1:17649093-17649112 | None:intergenic | 50.0% | |
| AGTAGGCTGTGCAGGACTAA+AGG | - | chr8.1:17648203-17648222 | MS.gene56878:intron | 50.0% | |
| AGTGCAGCGGTTAGACTTGA+GGG | + | chr8.1:17647059-17647078 | None:intergenic | 50.0% | |
| CAAAAACCGGAGATCATCCC+GGG | - | chr8.1:17648035-17648054 | MS.gene56878:intron | 50.0% | |
| CTGTTCTTGCACAATTGGGG+TGG | - | chr8.1:17650115-17650134 | MS.gene56878:CDS | 50.0% | |
| GACAGTGCTCCATGCTTCAT+AGG | - | chr8.1:17651052-17651071 | MS.gene56878:CDS | 50.0% | |
| GAGGGGGTCAGTGAAAAAAC+CGG | + | chr8.1:17647041-17647060 | None:intergenic | 50.0% | |
| GATGCAGTCACTGTTGTCAC+GGG | - | chr8.1:17648177-17648196 | MS.gene56878:intron | 50.0% | |
| GCAGAATGTTCGGAATCAGC+AGG | + | chr8.1:17649146-17649165 | None:intergenic | 50.0% | |
| GCGTCATTGAGGTGGACATT+TGG | - | chr8.1:17648066-17648085 | MS.gene56878:intron | 50.0% | |
| GGATGCAGTCACTGTTGTCA+CGG | - | chr8.1:17648176-17648195 | MS.gene56878:intron | 50.0% | |
| GTCATTCTAACTGCATCCGG+AGG | - | chr8.1:17649393-17649412 | MS.gene56878:intron | 50.0% | |
| GTGACAACAGTGACTGCATC+CGG | + | chr8.1:17648177-17648196 | None:intergenic | 50.0% | |
| GTGTATCCAGGGGTTAACAG+AGG | - | chr8.1:17649356-17649375 | MS.gene56878:intron | 50.0% | |
| TATGCTTTCGGGCAAGAGGA+AGG | + | chr8.1:17649109-17649128 | None:intergenic | 50.0% | |
| TGACAACAGTGACTGCATCC+GGG | + | chr8.1:17648176-17648195 | None:intergenic | 50.0% | |
| TGCGTGTAGATGCATGCACA+CGG | + | chr8.1:17648298-17648317 | None:intergenic | 50.0% | |
| ! | AGAACAAGGCGTCATTGAGG+TGG | - | chr8.1:17648058-17648077 | MS.gene56878:intron | 50.0% |
| ! | ATCTCGAGGTTATGGTGGGA+TGG | + | chr8.1:17650637-17650656 | None:intergenic | 50.0% |
| ! | CTGGGAATTTAGGAGTGCAG+CGG | + | chr8.1:17647072-17647091 | None:intergenic | 50.0% |
| ! | GGTTAACAGAGGGTGCACTT+AGG | - | chr8.1:17649367-17649386 | MS.gene56878:intron | 50.0% |
| ! | TCAATGACGCCTTGTTCTCC+CGG | + | chr8.1:17648056-17648075 | None:intergenic | 50.0% |
| !! | CAGGAAAAGTGCTACCACTC+AGG | + | chr8.1:17649442-17649461 | None:intergenic | 50.0% |
| ACAGTTGCGGCCATAGAAGC+TGG | - | chr8.1:17649029-17649048 | MS.gene56878:intron | 55.0% | |
| ACGCTATGCTTTCGGGCAAG+AGG | + | chr8.1:17649113-17649132 | None:intergenic | 55.0% | |
| ACGGGAATAGTAGGCTGTGC+AGG | - | chr8.1:17648195-17648214 | MS.gene56878:intron | 55.0% | |
| AGAGTTGTCGCACTTGCAGC+TGG | - | chr8.1:17647615-17647634 | MS.gene56878:intron | 55.0% | |
| CGCTGCACTCCTAAATTCCC+AGG | - | chr8.1:17647070-17647089 | MS.gene56878:CDS | 55.0% | |
| CGGGCAAGAGGAAGGACAAA+AGG | + | chr8.1:17649101-17649120 | None:intergenic | 55.0% | |
| GAGATCATCCCGGGAGAACA+AGG | - | chr8.1:17648044-17648063 | MS.gene56878:intron | 55.0% | |
| GAGTGCAGCGGTTAGACTTG+AGG | + | chr8.1:17647060-17647079 | None:intergenic | 55.0% | |
| GCTTCTATGGCCGCAACTGT+TGG | + | chr8.1:17649029-17649048 | None:intergenic | 55.0% | |
| GGACGAGCAATCCCAGAACT+AGG | - | chr8.1:17647307-17647326 | MS.gene56878:intron | 55.0% | |
| GTGCAGCGGTTAGACTTGAG+GGG | + | chr8.1:17647058-17647077 | None:intergenic | 55.0% | |
| GTTGACCTCACCTTCCCTTG+AGG | - | chr8.1:17651195-17651214 | MS.gene56878:intron | 55.0% | |
| TGAAAAAGGAGCCGGGCACA+CGG | + | chr8.1:17651028-17651047 | None:intergenic | 55.0% | |
| TGCAGCGGTTAGACTTGAGG+GGG | + | chr8.1:17647057-17647076 | None:intergenic | 55.0% | |
| TGTTCTCCCGGGATGATCTC+CGG | + | chr8.1:17648044-17648063 | None:intergenic | 55.0% | |
| ! | CAATGACGCCTTGTTCTCCC+GGG | + | chr8.1:17648055-17648074 | None:intergenic | 55.0% |
| ! | GGGAGAACAAGGCGTCATTG+AGG | - | chr8.1:17648055-17648074 | MS.gene56878:intron | 55.0% |
| ! | TTCTCAGGTTGCACGTCACC+CGG | - | chr8.1:17648155-17648174 | MS.gene56878:CDS | 55.0% |
| !! | AGTTCTGGGATTGCTCGTCC+TGG | + | chr8.1:17647307-17647326 | None:intergenic | 55.0% |
| !!! | CTGCATCCGGAGGTGCTTTT+AGG | - | chr8.1:17649403-17649422 | MS.gene56878:intron | 55.0% |
| ATTGCTCGTCCTGGCCATGC+TGG | + | chr8.1:17647298-17647317 | None:intergenic | 60.0% | |
| CATCAGGACCACCACCAGCA+TGG | - | chr8.1:17647281-17647300 | MS.gene56878:intron | 60.0% | |
| CTGTCATGGTTCCTCCAGCG+CGG | + | chr8.1:17650440-17650459 | None:intergenic | 60.0% | |
| GTGCACCCTCTGTTAACCCC+TGG | + | chr8.1:17649365-17649384 | None:intergenic | 60.0% | |
| TGACACATGTGCCGTGTGCC+CGG | - | chr8.1:17651014-17651033 | MS.gene56878:CDS | 60.0% | |
| CGCGCTGGAGGAACCATGAC+AGG | - | chr8.1:17650438-17650457 | MS.gene56878:intron | 65.0% | |
| CGTCCTGGCCATGCTGGTGG+TGG | + | chr8.1:17647292-17647311 | None:intergenic | 70.0% | |
| GCTCGTCCTGGCCATGCTGG+TGG | + | chr8.1:17647295-17647314 | None:intergenic | 70.0% | |
| GGACCACCACCAGCATGGCC+AGG | - | chr8.1:17647286-17647305 | MS.gene56878:intron | 70.0% | |
| TATGCTGCTGGCCGCGCTGG+AGG | - | chr8.1:17650426-17650445 | MS.gene56878:intron | 70.0% | |
| TCCAGCGCGGCCAGCAGCAT+AGG | + | chr8.1:17650427-17650446 | None:intergenic | 70.0% | |
| GCCTATGCTGCTGGCCGCGC+TGG | - | chr8.1:17650423-17650442 | MS.gene56878:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 17647001 | 17651300 | 17647001 | ID=MS.gene56878 |
| chr8.1 | mRNA | 17647001 | 17651300 | 17647001 | ID=MS.gene56878.t1;Parent=MS.gene56878 |
| chr8.1 | exon | 17651210 | 17651300 | 17651210 | ID=MS.gene56878.t1.exon1;Parent=MS.gene56878.t1 |
| chr8.1 | CDS | 17651210 | 17651300 | 17651210 | ID=cds.MS.gene56878.t1;Parent=MS.gene56878.t1 |
| chr8.1 | exon | 17650905 | 17651092 | 17650905 | ID=MS.gene56878.t1.exon2;Parent=MS.gene56878.t1 |
| chr8.1 | CDS | 17650905 | 17651092 | 17650905 | ID=cds.MS.gene56878.t1;Parent=MS.gene56878.t1 |
| chr8.1 | exon | 17650636 | 17650722 | 17650636 | ID=MS.gene56878.t1.exon3;Parent=MS.gene56878.t1 |
| chr8.1 | CDS | 17650636 | 17650722 | 17650636 | ID=cds.MS.gene56878.t1;Parent=MS.gene56878.t1 |
| chr8.1 | exon | 17650225 | 17650350 | 17650225 | ID=MS.gene56878.t1.exon4;Parent=MS.gene56878.t1 |
| chr8.1 | CDS | 17650225 | 17650350 | 17650225 | ID=cds.MS.gene56878.t1;Parent=MS.gene56878.t1 |
| chr8.1 | exon | 17650077 | 17650139 | 17650077 | ID=MS.gene56878.t1.exon5;Parent=MS.gene56878.t1 |
| chr8.1 | CDS | 17650077 | 17650139 | 17650077 | ID=cds.MS.gene56878.t1;Parent=MS.gene56878.t1 |
| chr8.1 | exon | 17649126 | 17649275 | 17649126 | ID=MS.gene56878.t1.exon6;Parent=MS.gene56878.t1 |
| chr8.1 | CDS | 17649126 | 17649275 | 17649126 | ID=cds.MS.gene56878.t1;Parent=MS.gene56878.t1 |
| chr8.1 | exon | 17648877 | 17648944 | 17648877 | ID=MS.gene56878.t1.exon7;Parent=MS.gene56878.t1 |
| chr8.1 | CDS | 17648877 | 17648944 | 17648877 | ID=cds.MS.gene56878.t1;Parent=MS.gene56878.t1 |
| chr8.1 | exon | 17648479 | 17648590 | 17648479 | ID=MS.gene56878.t1.exon8;Parent=MS.gene56878.t1 |
| chr8.1 | CDS | 17648479 | 17648590 | 17648479 | ID=cds.MS.gene56878.t1;Parent=MS.gene56878.t1 |
| chr8.1 | exon | 17648293 | 17648397 | 17648293 | ID=MS.gene56878.t1.exon9;Parent=MS.gene56878.t1 |
| chr8.1 | CDS | 17648293 | 17648397 | 17648293 | ID=cds.MS.gene56878.t1;Parent=MS.gene56878.t1 |
| chr8.1 | exon | 17648072 | 17648193 | 17648072 | ID=MS.gene56878.t1.exon10;Parent=MS.gene56878.t1 |
| chr8.1 | CDS | 17648072 | 17648193 | 17648072 | ID=cds.MS.gene56878.t1;Parent=MS.gene56878.t1 |
| chr8.1 | exon | 17647790 | 17647936 | 17647790 | ID=MS.gene56878.t1.exon11;Parent=MS.gene56878.t1 |
| chr8.1 | CDS | 17647790 | 17647936 | 17647790 | ID=cds.MS.gene56878.t1;Parent=MS.gene56878.t1 |
| chr8.1 | exon | 17647001 | 17647169 | 17647001 | ID=MS.gene56878.t1.exon12;Parent=MS.gene56878.t1 |
| chr8.1 | CDS | 17647001 | 17647169 | 17647001 | ID=cds.MS.gene56878.t1;Parent=MS.gene56878.t1 |
| Gene Sequence |
| Protein sequence |
