AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene056610


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene056610.t1 MTR_4g068230 94.523 566 26 1 18 583 17 577 0.0 1090
MS.gene056610.t1 MTR_4g068240 81.109 577 81 3 1 576 44 593 0.0 926
MS.gene056610.t1 MTR_4g068270 85.714 525 75 0 52 576 3 527 0.0 922
MS.gene056610.t1 MTR_5g096240 71.622 74 21 0 327 400 1 74 1.13e-28 109
MS.gene056610.t1 MTR_4g117010 70.270 74 22 0 327 400 1 74 4.01e-26 102
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 143 sgRNAs with CRISPR-Local

Find 281 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTGTTTGTGCTTCTAATA+TGG 0.174686 4.3:+36731754 None:intergenic
GAGAGCATTGGTAAGGTTTC+GGG 0.190923 4.3:-36730414 MS.gene056610:CDS
GTCCTTACAAATTGAATTTC+AGG 0.203917 4.3:-36733357 MS.gene056610:CDS
CTTTGATGATCCAAACAATT+TGG 0.249297 4.3:+36731727 None:intergenic
CTCTCGTATTTCCCATATTC+TGG 0.251716 4.3:+36732040 None:intergenic
TCCTCGAAATTGTCATTTAT+CGG 0.257328 4.3:-36731621 MS.gene056610:CDS
AGCATTGCACTGCCAGAATA+TGG 0.262779 4.3:-36732052 MS.gene056610:CDS
TGCTTCTAATATGGGTCCTT+GGG 0.268218 4.3:+36731763 None:intergenic
GCTTGGTTGAATACAGTATC+AGG 0.268880 4.3:+36730849 None:intergenic
GACTTGTGGTTTGGAGAGTT+TGG 0.285707 4.3:+36730928 None:intergenic
TTCCTTCCAATTCGAGTTCC+TGG 0.285931 4.3:+36731234 None:intergenic
TGGGAAGGTGAAAACCGTTT+TGG 0.293842 4.3:+36733469 None:intergenic
CTGTTAGATCAGCCCCTTGC+TGG 0.315011 4.3:+36731048 None:intergenic
TTGTCATTTATCGGCTATAT+CGG 0.328484 4.3:-36731612 MS.gene056610:CDS
AAGTCCTAGTTACCTGCTTT+TGG 0.329378 4.3:-36730910 MS.gene056610:CDS
TGGTGAACTGCTGCATTCAT+TGG 0.330055 4.3:+36731979 None:intergenic
ATCACTTATGCACTTAATCT+TGG 0.331813 4.3:-36730618 MS.gene056610:CDS
TCTGTTTGTGCTTCTAATAT+GGG 0.332552 4.3:+36731755 None:intergenic
GAAATCTTATATCGGGATTT+CGG 0.334553 4.3:-36730672 MS.gene056610:CDS
GTGCTTCTAATATGGGTCCT+TGG 0.338955 4.3:+36731762 None:intergenic
GGAGAGCATTGGTAAGGTTT+CGG 0.339213 4.3:-36730415 MS.gene056610:CDS
TGGTGGTGTCACTCCATTAC+AGG 0.339936 4.3:-36731522 MS.gene056610:intron
GGTGAACTGCTGCATTCATT+GGG 0.340579 4.3:+36731980 None:intergenic
CAGAAGAGGTTGTCAAGTTC+AGG 0.367195 4.3:+36731788 None:intergenic
ACAGGTATACCTGGAGGATA+TGG 0.369128 4.3:+36730378 None:intergenic
TGGGATCCAGGCAGCAATAA+TGG 0.370354 4.3:-36731675 MS.gene056610:CDS
ACAGAAGCAGCCAAATTGTT+TGG 0.373346 4.3:-36731737 MS.gene056610:CDS
GTCCTGAAATTCAATTTGTA+AGG 0.380572 4.3:+36733355 None:intergenic
AAGAAATTCTCCTGGTGAAC+AGG 0.381246 4.3:+36731649 None:intergenic
TCAGTAAGTACTCCGTCTTT+AGG 0.381290 4.3:+36730519 None:intergenic
TGCTATCCAGGAACTCGAAT+TGG 0.387817 4.3:-36731240 MS.gene056610:CDS
CACTTAATCTTGGAACTTGT+AGG 0.388613 4.3:-36730608 MS.gene056610:CDS
GCAGGTATTGAGTGCTATCC+AGG 0.393137 4.3:-36731252 MS.gene056610:intron
TAAAAGAAAAGTAACGATAA+AGG 0.393781 4.3:-36730436 MS.gene056610:CDS
GGTAACTAGGACTTGTGGTT+TGG 0.402917 4.3:+36730919 None:intergenic
CTAGCTCAGCCCTCCAGCAA+GGG 0.409492 4.3:-36731061 MS.gene056610:CDS
CCTTGCTGGAGGGCTGAGCT+AGG 0.410613 4.3:+36731062 None:intergenic
TTATTCCCGATAAAAGCCTT+TGG 0.411005 4.3:+36730577 None:intergenic
TTGTCGGAGGTACTACTTGT+GGG 0.411563 4.3:-36731694 MS.gene056610:CDS
GCCTCGATGACTCGACTCAT+TGG 0.419230 4.3:-36731845 MS.gene056610:CDS
GACAACTATAGAAGAAAGTA+AGG 0.423013 4.3:+36730263 None:intergenic
CAGCACCTTCACTTCTTACA+TGG 0.424209 4.3:+36730307 None:intergenic
AAGCGGATGAAATCTTATAT+CGG 0.425695 4.3:-36730680 MS.gene056610:CDS
AGCCGCAATGGATCAATTGC+AGG 0.428507 4.3:+36730741 None:intergenic
AATAACTGAATCACCTGTAA+TGG 0.429007 4.3:+36731509 None:intergenic
ATCACTTCACCTACTTATCA+TGG 0.430365 4.3:-36731191 MS.gene056610:CDS
CTCTCAGTAATAACCTCACC+GGG 0.446512 4.3:+36730348 None:intergenic
CATTTGCTAATTTAATCGCT+TGG 0.448024 4.3:+36730832 None:intergenic
AGGCCACTCTGCTGAAGCTC+TGG 0.449434 4.3:+36731959 None:intergenic
GAATTGTTTGTGAACTCGTT+GGG 0.450040 4.3:-36730650 MS.gene056610:CDS
AGGTACTACTTGTGGGATCC+AGG 0.450761 4.3:-36731687 MS.gene056610:CDS
TTTATCAATTATTATGAGAC+CGG 0.454597 4.3:+36730219 None:intergenic
TCATCTATGCTGCACATGTC+AGG 0.461997 4.3:-36730987 MS.gene056610:CDS
TTCTCAAGCACTGAGATGCC+AGG 0.468757 4.3:+36730783 None:intergenic
GTTGAGATCTAGCAGCATCT+AGG 0.468914 4.3:+36730883 None:intergenic
ACCTCACCGGGGATCAATAC+AGG 0.471875 4.3:+36730360 None:intergenic
ATGGGAAATACGAGAGCGTT+GGG 0.472269 4.3:-36732033 MS.gene056610:CDS
GAAGCTCACGGTGCACATCT+AGG 0.481340 4.3:-36731101 MS.gene056610:CDS
AGCGGATGAAATCTTATATC+GGG 0.486805 4.3:-36730679 MS.gene056610:CDS
AGTGAAGGTGCTGATATTAG+TGG 0.488793 4.3:-36730297 MS.gene056610:CDS
CAATGGATCAATTGCAGGAA+TGG 0.490219 4.3:+36730746 None:intergenic
GCCGATAAATGACAATTTCG+AGG 0.493005 4.3:+36731620 None:intergenic
TTGAGATCTAGCAGCATCTA+GGG 0.495500 4.3:+36730884 None:intergenic
TTAGATCAGCCCCTTGCTGG+AGG 0.497118 4.3:+36731051 None:intergenic
CCGATAAAAGCCTTTGGACA+TGG 0.500427 4.3:+36730583 None:intergenic
CCTAGCTCAGCCCTCCAGCA+AGG 0.500862 4.3:-36731062 MS.gene056610:CDS
GCATTGCACTGCCAGAATAT+GGG 0.501046 4.3:-36732051 MS.gene056610:CDS
TACATGGAGTAGATAATTGA+CGG 0.501521 4.3:+36730323 None:intergenic
TCAAAGACATGGTTTCTTGT+CGG 0.502260 4.3:-36731710 MS.gene056610:CDS
GCTCGTGATTATATCATCAA+AGG 0.513244 4.3:+36730488 None:intergenic
TCGGGTAAATCATGAGCATA+TGG 0.513396 4.3:+36731815 None:intergenic
ATGAGTCGAGTCATCGAGGC+AGG 0.515945 4.3:+36731848 None:intergenic
GTTGTCAAGTTCAGGAAGCT+CGG 0.516331 4.3:+36731796 None:intergenic
TCCGTCTTTAGGTTGCTGAA+TGG 0.517648 4.3:+36730530 None:intergenic
CTTATTTGTCCATATCCTCC+AGG 0.518004 4.3:-36730387 MS.gene056610:CDS
GATGCCAAAAGCAGGTAACT+AGG 0.520797 4.3:+36730906 None:intergenic
TAGTCAGGAACAATGTACTT+AGG 0.526216 4.3:+36731566 None:intergenic
CTCGTGATTATATCATCAAA+GGG 0.527399 4.3:+36730489 None:intergenic
TGCTCTCTTAAACAATTCCC+TGG 0.527535 4.3:-36730801 MS.gene056610:CDS
GATTCCGTCTTATTCCTCTC+AGG 0.528052 4.3:-36733323 MS.gene056610:intron
AGGTTGCCATTATTGCTGCC+TGG 0.528356 4.3:+36731669 None:intergenic
CTGCAAATACCATGATAAGT+AGG 0.530759 4.3:+36731182 None:intergenic
GATCCATTGCGGCTTACTGT+TGG 0.532942 4.3:-36730732 MS.gene056610:CDS
CTTGTCGGAGGTACTACTTG+TGG 0.534948 4.3:-36731695 MS.gene056610:CDS
GGAATTGTTTGTGAACTCGT+TGG 0.535480 4.3:-36730651 MS.gene056610:CDS
TAGCTCAGCCCTCCAGCAAG+GGG 0.536029 4.3:-36731060 MS.gene056610:CDS
TTGTCAAGTTCAGGAAGCTC+GGG 0.537006 4.3:+36731797 None:intergenic
ATATCGGCCATGGTATTATC+CGG 0.538000 4.3:-36731596 MS.gene056610:CDS
GCATGGCCTCTGTTATGTCC+AGG 0.538975 4.3:+36731875 None:intergenic
TAGATCAGCCCCTTGCTGGA+GGG 0.546263 4.3:+36731052 None:intergenic
CTACTCCATGTAAGAAGTGA+AGG 0.546727 4.3:-36730312 MS.gene056610:CDS
GCTTTCAATGCACTAACTAA+AGG 0.546743 4.3:+36731932 None:intergenic
GGATCAATTGCAGGAATGGT+CGG 0.547650 4.3:+36730750 None:intergenic
ACTTAATCTTGGAACTTGTA+GGG 0.553282 4.3:-36730607 MS.gene056610:CDS
GATAAAGGAGAGCATTGGTA+AGG 0.554559 4.3:-36730421 MS.gene056610:CDS
CATCTAGGGATGCCAAAAGC+AGG 0.554864 4.3:+36730898 None:intergenic
TATGGGAAATACGAGAGCGT+TGG 0.559578 4.3:-36732034 MS.gene056610:CDS
TCTTTAGGTTGCTGAATGGA+AGG 0.572281 4.3:+36730534 None:intergenic
TTGAAAGGGGACGACGAGAG+TGG 0.579236 4.3:+36733502 None:intergenic
AAACCAACAGTAAGCCGCAA+TGG 0.579462 4.3:+36730729 None:intergenic
GGAAGAATAAGAAATTCTCC+TGG 0.582632 4.3:+36731641 None:intergenic
GACAACCTCTTCTGTCCCCA+AGG 0.585276 4.3:-36731779 MS.gene056610:CDS
GGGATCAATACAGGTATACC+TGG 0.585742 4.3:+36730369 None:intergenic
TCTCTCAGTAATAACCTCAC+CGG 0.588463 4.3:+36730347 None:intergenic
AGAGCATTGGTAAGGTTTCG+GGG 0.589661 4.3:-36730413 MS.gene056610:CDS
TCCATTCAGCAACCTAAAGA+CGG 0.595343 4.3:-36730531 MS.gene056610:CDS
GGTATACCTGTATTGATCCC+CGG 0.595466 4.3:-36730366 MS.gene056610:CDS
ATAATGGCAACCTGTTCACC+AGG 0.600507 4.3:-36731659 MS.gene056610:CDS
TTCAATGCACTAACTAAAGG+AGG 0.600852 4.3:+36731935 None:intergenic
GTAACGATAAAGGAGAGCAT+TGG 0.603794 4.3:-36730426 MS.gene056610:CDS
AATGTACTTAGGCACTGCAC+CGG 0.604306 4.3:+36731577 None:intergenic
TGTTTGGATCATCAAAGACA+TGG 0.608692 4.3:-36731721 MS.gene056610:CDS
GTGAACTGCTGCATTCATTG+GGG 0.608779 4.3:+36731981 None:intergenic
TTTATCGGCTATATCGGCCA+TGG 0.610715 4.3:-36731606 MS.gene056610:CDS
TTCCTGCAATTGATCCATTG+CGG 0.611741 4.3:-36730743 MS.gene056610:CDS
CTGATTGTTGATGAAGCTCA+CGG 0.614046 4.3:-36731113 MS.gene056610:CDS
CTTGGTTGAATACAGTATCA+GGG 0.615374 4.3:+36730850 None:intergenic
TCTCAAGCACTGAGATGCCA+GGG 0.617988 4.3:+36730784 None:intergenic
TCATCGAGGCAGGAGCGGCA+TGG 0.619945 4.3:+36731858 None:intergenic
CTTGTAGGGACCATGTCCAA+AGG 0.621624 4.3:-36730593 MS.gene056610:CDS
ATCCAGGAACTCGAATTGGA+AGG 0.621828 4.3:-36731236 MS.gene056610:CDS
ATGTCCAGGAAAGTGAAAAG+TGG 0.622147 4.3:+36731889 None:intergenic
TGGGTCCTTGGGGACAGAAG+AGG 0.623355 4.3:+36731774 None:intergenic
TCGAGTCATCGAGGCAGGAG+CGG 0.624226 4.3:+36731853 None:intergenic
CACTTTCCTGGACATAACAG+AGG 0.631168 4.3:-36731881 MS.gene056610:CDS
ATGCACTAACTAAAGGAGGT+AGG 0.636092 4.3:+36731939 None:intergenic
TGAGCTTCATCAACAATCAG+AGG 0.639277 4.3:+36731116 None:intergenic
AAGACATGGTTTCTTGTCGG+AGG 0.641334 4.3:-36731707 MS.gene056610:CDS
GCTTCTAATATGGGTCCTTG+GGG 0.641541 4.3:+36731764 None:intergenic
AACAGTACAGTCTACTCACA+AGG 0.650174 4.3:-36731030 MS.gene056610:CDS
ACCTGTATTGATCCCCGGTG+AGG 0.653105 4.3:-36730361 MS.gene056610:CDS
GAGACCTGAGAGGAATAAGA+CGG 0.653253 4.3:+36733319 None:intergenic
TCACCAGAGCTTCAGCAGAG+TGG 0.657824 4.3:-36731962 MS.gene056610:CDS
ACAACTATAGAAGAAAGTAA+GGG 0.663858 4.3:+36730264 None:intergenic
AAGCAGGTAACTAGGACTTG+TGG 0.664545 4.3:+36730914 None:intergenic
GAGCATTGGTAAGGTTTCGG+GGG 0.674611 4.3:-36730412 MS.gene056610:CDS
TCCAATGAGTCGAGTCATCG+AGG 0.679421 4.3:+36731844 None:intergenic
AGAAATGAAGGAGACCTGAG+AGG 0.688557 4.3:+36733309 None:intergenic
CACTGCACCGGATAATACCA+TGG 0.689114 4.3:+36731589 None:intergenic
ATCAATACAGGTATACCTGG+AGG 0.690812 4.3:+36730372 None:intergenic
TGGGTTATCAGGTTACGAAG+CGG 0.691347 4.3:-36730697 MS.gene056610:CDS
AATGATTGGGACATCGCTGG+TGG 0.722880 4.3:-36731539 MS.gene056610:CDS
TCTCAGTAATAACCTCACCG+GGG 0.800637 4.3:+36730349 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATAAATTTCTAATCATAT+AGG + chr4.3:36731297-36731316 None:intergenic 10.0%
!! AATAAAAAGTGAAAAAACTA+AGG + chr4.3:36730596-36730615 None:intergenic 15.0%
!! ATATAATTTAGTGTAATCAT+AGG - chr4.3:36731080-36731099 MS.gene056610:CDS 15.0%
!! TAGATAAAGAAAAAATATCT+AGG - chr4.3:36732806-36732825 MS.gene056610:intron 15.0%
!!! AATTTTTAATGTAGTTTAGT+TGG - chr4.3:36731349-36731368 MS.gene056610:intron 15.0%
!!! ATTTTTAATGTAGTTTAGTT+GGG - chr4.3:36731350-36731369 MS.gene056610:intron 15.0%
!!! CATTTTTTTCAAATTATCAT+CGG + chr4.3:36731060-36731079 None:intergenic 15.0%
!!! GTATTTAAAATAAGAAATGA+AGG + chr4.3:36730468-36730487 None:intergenic 15.0%
!!! TTAGTTTTTTCACTTTTTAT+TGG - chr4.3:36730595-36730614 MS.gene056610:CDS 15.0%
!! ATCATTACTCATATGATAAA+CGG + chr4.3:36730537-36730556 None:intergenic 20.0%
!! TAAAAGAAAAGTAACGATAA+AGG - chr4.3:36733326-36733345 MS.gene056610:CDS 20.0%
!! TATTATACACTATCACAATT+TGG - chr4.3:36732275-36732294 MS.gene056610:intron 20.0%
!! TCAAAAAAGTTGTCATTAAA+TGG + chr4.3:36730570-36730589 None:intergenic 20.0%
!!! ACAACATTTCATTTTAATTC+AGG + chr4.3:36731592-36731611 None:intergenic 20.0%
!!! TTTTTAATGTAGTTTAGTTG+GGG - chr4.3:36731351-36731370 MS.gene056610:intron 20.0%
!!! TTTTTATTGGTCAAAAACAA+TGG - chr4.3:36730608-36730627 MS.gene056610:CDS 20.0%
! AAGACTAAGGTAAAAAGATA+TGG - chr4.3:36731246-36731265 MS.gene056610:CDS 25.0%
! AATATCTAATATCATTGTCG+AGG + chr4.3:36732402-36732421 None:intergenic 25.0%
! ACAACTATAGAAGAAAGTAA+GGG + chr4.3:36733501-36733520 None:intergenic 25.0%
! AGACTAAGGTAAAAAGATAT+GGG - chr4.3:36731247-36731266 MS.gene056610:CDS 25.0%
! AGTAAGAAAATCATGTAATC+AGG + chr4.3:36732377-36732396 None:intergenic 25.0%
! TCCTGACTATAAAAATGATT+GGG - chr4.3:36732210-36732229 MS.gene056610:intron 25.0%
! TTCCTGACTATAAAAATGAT+TGG - chr4.3:36732209-36732228 MS.gene056610:intron 25.0%
! TTGTGTATAATACACCAAAA+TGG + chr4.3:36731448-36731467 None:intergenic 25.0%
!! AATAAGCTGAAAACAACTTT+TGG - chr4.3:36730977-36730996 MS.gene056610:CDS 25.0%
!! ATATCTTTTTACCTTAGTCT+TGG + chr4.3:36731247-36731266 None:intergenic 25.0%
!! GTATGTGTTTCTGTATATAT+AGG - chr4.3:36730873-36730892 MS.gene056610:CDS 25.0%
!! TGGCTATATTCTCTAAAAAT+TGG - chr4.3:36732295-36732314 MS.gene056610:intron 25.0%
!!! TTTTTTTCTTTCTTTTCCTG+TGG - chr4.3:36732479-36732498 MS.gene056610:intron 25.0%
AAGCGGATGAAATCTTATAT+CGG - chr4.3:36733082-36733101 MS.gene056610:intron 30.0%
AATAACTGAATCACCTGTAA+TGG + chr4.3:36732256-36732275 None:intergenic 30.0%
AATAGCTTATGTACACGTTT+GGG - chr4.3:36730495-36730514 MS.gene056610:CDS 30.0%
ACTTAATCTTGGAACTTGTA+GGG - chr4.3:36733155-36733174 MS.gene056610:intron 30.0%
ATCACTTATGCACTTAATCT+TGG - chr4.3:36733144-36733163 MS.gene056610:intron 30.0%
CTCGTGATTATATCATCAAA+GGG + chr4.3:36733276-36733295 None:intergenic 30.0%
GAAAGAGAACAACATTAGAT+AGG + chr4.3:36732452-36732471 None:intergenic 30.0%
GAAATCTTATATCGGGATTT+CGG - chr4.3:36733090-36733109 MS.gene056610:intron 30.0%
GACAACTATAGAAGAAAGTA+AGG + chr4.3:36733502-36733521 None:intergenic 30.0%
GTATAATACACCAAAATGGT+CGG + chr4.3:36731444-36731463 None:intergenic 30.0%
GTCCTGAAATTCAATTTGTA+AGG + chr4.3:36730410-36730429 None:intergenic 30.0%
GTCCTTACAAATTGAATTTC+AGG - chr4.3:36730405-36730424 MS.gene056610:CDS 30.0%
GTTAGCACTTACTGAAAAAT+GGG + chr4.3:36730315-36730334 None:intergenic 30.0%
GTTCAAAAGTTGTCAAAAAG+TGG - chr4.3:36730688-36730707 MS.gene056610:CDS 30.0%
TAATAGCTTATGTACACGTT+TGG - chr4.3:36730494-36730513 MS.gene056610:CDS 30.0%
TACATGGAGTAGATAATTGA+CGG + chr4.3:36733442-36733461 None:intergenic 30.0%
TATTGGTCAAAAACAATGGA+GGG - chr4.3:36730612-36730631 MS.gene056610:CDS 30.0%
TCAATCCCAAAAATCCAAAA+CGG - chr4.3:36730279-36730298 MS.gene056610:CDS 30.0%
TCTGTTTGTGCTTCTAATAT+GGG + chr4.3:36732010-36732029 None:intergenic 30.0%
TTATTGGTCAAAAACAATGG+AGG - chr4.3:36730611-36730630 MS.gene056610:CDS 30.0%
TTCTGTTTGTGCTTCTAATA+TGG + chr4.3:36732011-36732030 None:intergenic 30.0%
TTTCAAATTATCATCGGTGT+TGG + chr4.3:36731054-36731073 None:intergenic 30.0%
! ACAGAAGAAGAAAGATTTTG+TGG + chr4.3:36730337-36730356 None:intergenic 30.0%
! CAACAATCAGAGGAATTTTA+CGG + chr4.3:36732639-36732658 None:intergenic 30.0%
! CATTTGCTAATTTAATCGCT+TGG + chr4.3:36732933-36732952 None:intergenic 30.0%
! CTTTGATGATCCAAACAATT+TGG + chr4.3:36732038-36732057 None:intergenic 30.0%
! GGGTAATAAGATTAGCTAAA+GGG - chr4.3:36731371-36731390 MS.gene056610:intron 30.0%
! TCCTCGAAATTGTCATTTAT+CGG - chr4.3:36732141-36732160 MS.gene056610:intron 30.0%
! TCCTTTTCTGTTTATTTGCA+GGG - chr4.3:36730380-36730399 MS.gene056610:CDS 30.0%
! TTCCTTTTCTGTTTATTTGC+AGG - chr4.3:36730379-36730398 MS.gene056610:CDS 30.0%
! TTGTCATTTATCGGCTATAT+CGG - chr4.3:36732150-36732169 MS.gene056610:intron 30.0%
!! AAGCTATAAGCTGTTTTCAT+AGG - chr4.3:36730933-36730952 MS.gene056610:CDS 30.0%
!! GAAAACCGTTTTGGATTTTT+GGG + chr4.3:36730287-36730306 None:intergenic 30.0%
!! TCCCAATCATTTTTATAGTC+AGG + chr4.3:36732214-36732233 None:intergenic 30.0%
!! TGAAAACCGTTTTGGATTTT+TGG + chr4.3:36730288-36730307 None:intergenic 30.0%
!!! TTGGATTTTTGGGATTGAAA+GGG + chr4.3:36730277-36730296 None:intergenic 30.0%
!!! TTTGGATTTTTGGGATTGAA+AGG + chr4.3:36730278-36730297 None:intergenic 30.0%
ACACTATCCTTCATTGCAAT+GGG - chr4.3:36731642-36731661 MS.gene056610:CDS 35.0%
ACTTGCAAAAAATGCATCTC+TGG + chr4.3:36733307-36733326 None:intergenic 35.0%
AGCCTCTTGTGTAAAAAACA+GGG + chr4.3:36731476-36731495 None:intergenic 35.0%
AGCGGATGAAATCTTATATC+GGG - chr4.3:36733083-36733102 MS.gene056610:intron 35.0%
ATCACTTCACCTACTTATCA+TGG - chr4.3:36732571-36732590 MS.gene056610:intron 35.0%
ATGGGCGTAAAATTGATCTT+TGG - chr4.3:36731265-36731284 MS.gene056610:intron 35.0%
ATTGCAATGAAGGATAGTGT+AGG + chr4.3:36731642-36731661 None:intergenic 35.0%
CACTTAATCTTGGAACTTGT+AGG - chr4.3:36733154-36733173 MS.gene056610:intron 35.0%
CGATGTACATAAAAAACAGC+CGG - chr4.3:36733524-36733543 MS.gene056610:CDS 35.0%
CTAAATTAGCCCACCTAAAT+TGG + chr4.3:36730838-36730857 None:intergenic 35.0%
CTGCAAATACCATGATAAGT+AGG + chr4.3:36732583-36732602 None:intergenic 35.0%
CTTGCAAAAAATGCATCTCT+GGG + chr4.3:36733306-36733325 None:intergenic 35.0%
CTTGGTTGAATACAGTATCA+GGG + chr4.3:36732915-36732934 None:intergenic 35.0%
CTTGTGTAAAAAACAGGGTA+AGG + chr4.3:36731471-36731490 None:intergenic 35.0%
GAATTGTTTGTGAACTCGTT+GGG - chr4.3:36733112-36733131 MS.gene056610:intron 35.0%
GCTCGTGATTATATCATCAA+AGG + chr4.3:36733277-36733296 None:intergenic 35.0%
GCTTTCAATGCACTAACTAA+AGG + chr4.3:36731833-36731852 None:intergenic 35.0%
GGAAGAATAAGAAATTCTCC+TGG + chr4.3:36732124-36732143 None:intergenic 35.0%
GGTTAGCACTTACTGAAAAA+TGG + chr4.3:36730316-36730335 None:intergenic 35.0%
TAAACACTTGTGAGACTGTT+TGG + chr4.3:36731172-36731191 None:intergenic 35.0%
TACACTATCCTTCATTGCAA+TGG - chr4.3:36731641-36731660 MS.gene056610:CDS 35.0%
TAGCTAATCTTATTACCCGA+GGG + chr4.3:36731567-36731586 None:intergenic 35.0%
TAGTCAGGAACAATGTACTT+AGG + chr4.3:36732199-36732218 None:intergenic 35.0%
TCAAAGACATGGTTTCTTGT+CGG - chr4.3:36732052-36732071 MS.gene056610:CDS 35.0%
TCATAATGAGGCAGTACTAA+TGG + chr4.3:36731619-36731638 None:intergenic 35.0%
TCCCTGCAAATAAACAGAAA+AGG + chr4.3:36730384-36730403 None:intergenic 35.0%
TGTTTGGATCATCAAAGACA+TGG - chr4.3:36732041-36732060 MS.gene056610:CDS 35.0%
TTATTCCCGATAAAAGCCTT+TGG + chr4.3:36733188-36733207 None:intergenic 35.0%
TTCAATGCACTAACTAAAGG+AGG + chr4.3:36731830-36731849 None:intergenic 35.0%
TTGCAAAAAATGCATCTCTG+GGG + chr4.3:36733305-36733324 None:intergenic 35.0%
! GGGGTAATAAGATTAGCTAA+AGG - chr4.3:36731370-36731389 MS.gene056610:intron 35.0%
! TTTCTTTCTTTTCCTGTGGT+TGG - chr4.3:36732483-36732502 MS.gene056610:intron 35.0%
!! ATGTGTTTTTGTAACCCAGT+TGG - chr4.3:36730737-36730756 MS.gene056610:CDS 35.0%
!! TGTGTTTTTGTAACCCAGTT+GGG - chr4.3:36730738-36730757 MS.gene056610:CDS 35.0%
!!! TACCCTGTTTTTTACACAAG+AGG - chr4.3:36731471-36731490 MS.gene056610:intron 35.0%
!!! TGGATTTTTGGGATTGAAAG+GGG + chr4.3:36730276-36730295 None:intergenic 35.0%
AAAAATGATTGGGACATCGC+TGG - chr4.3:36732220-36732239 MS.gene056610:intron 40.0%
AACAGTACAGTCTACTCACA+AGG - chr4.3:36732732-36732751 MS.gene056610:intron 40.0%
AAGAAATTCTCCTGGTGAAC+AGG + chr4.3:36732116-36732135 None:intergenic 40.0%
ACAGAAGCAGCCAAATTGTT+TGG - chr4.3:36732025-36732044 MS.gene056610:CDS 40.0%
ACGTTCTAACGAAGACTGTT+TGG + chr4.3:36731224-36731243 None:intergenic 40.0%
AGCTAATCTTATTACCCGAG+GGG + chr4.3:36731566-36731585 None:intergenic 40.0%
AGGGAGAAAAAAGAAGAGAG+AGG - chr4.3:36730631-36730650 MS.gene056610:CDS 40.0%
ATATCGGCCATGGTATTATC+CGG - chr4.3:36732166-36732185 MS.gene056610:intron 40.0%
ATCAATACAGGTATACCTGG+AGG + chr4.3:36733393-36733412 None:intergenic 40.0%
ATGCACTAACTAAAGGAGGT+AGG + chr4.3:36731826-36731845 None:intergenic 40.0%
ATGTCCAGGAAAGTGAAAAG+TGG + chr4.3:36731876-36731895 None:intergenic 40.0%
ATTGTGGTCATCTGACTGAA+AGG + chr4.3:36731522-36731541 None:intergenic 40.0%
CAATGGATCAATTGCAGGAA+TGG + chr4.3:36733019-36733038 None:intergenic 40.0%
CAGCCTCTTGTGTAAAAAAC+AGG + chr4.3:36731477-36731496 None:intergenic 40.0%
CTACTCCATGTAAGAAGTGA+AGG - chr4.3:36733450-36733469 MS.gene056610:intron 40.0%
CTAGCTAATCTTATTACCCG+AGG + chr4.3:36731568-36731587 None:intergenic 40.0%
CTCTCGTATTTCCCATATTC+TGG + chr4.3:36731725-36731744 None:intergenic 40.0%
CTTATTTGTCCATATCCTCC+AGG - chr4.3:36733375-36733394 MS.gene056610:intron 40.0%
GACAAAACCCATTGCAATGA+AGG + chr4.3:36731652-36731671 None:intergenic 40.0%
GCACTTACTGAAAAATGGGA+AGG + chr4.3:36730311-36730330 None:intergenic 40.0%
GCCGATAAATGACAATTTCG+AGG + chr4.3:36732145-36732164 None:intergenic 40.0%
GCTTGGTTGAATACAGTATC+AGG + chr4.3:36732916-36732935 None:intergenic 40.0%
GGAATTGTTTGTGAACTCGT+TGG - chr4.3:36733111-36733130 MS.gene056610:intron 40.0%
GGATAGTGTAGGTCATAATG+AGG + chr4.3:36731631-36731650 None:intergenic 40.0%
TCAGTAAGTACTCCGTCTTT+AGG + chr4.3:36733246-36733265 None:intergenic 40.0%
TCCATTCAGCAACCTAAAGA+CGG - chr4.3:36733231-36733250 MS.gene056610:intron 40.0%
TCGGGTAAATCATGAGCATA+TGG + chr4.3:36731950-36731969 None:intergenic 40.0%
TCTCTCAGTAATAACCTCAC+CGG + chr4.3:36733418-36733437 None:intergenic 40.0%
TGAGCTTCATCAACAATCAG+AGG + chr4.3:36732649-36732668 None:intergenic 40.0%
TGCAAAAAATGCATCTCTGG+GGG + chr4.3:36733304-36733323 None:intergenic 40.0%
TGCTCTCTTAAACAATTCCC+TGG - chr4.3:36732961-36732980 MS.gene056610:intron 40.0%
TGCTTCTAATATGGGTCCTT+GGG + chr4.3:36732002-36732021 None:intergenic 40.0%
TTCCTGCAATTGATCCATTG+CGG - chr4.3:36733019-36733038 MS.gene056610:intron 40.0%
TTGAGATCTAGCAGCATCTA+GGG + chr4.3:36732881-36732900 None:intergenic 40.0%
TTGGCGCAACAGTAAAATTG+TGG + chr4.3:36731538-36731557 None:intergenic 40.0%
! AAGTCCTAGTTACCTGCTTT+TGG - chr4.3:36732852-36732871 MS.gene056610:intron 40.0%
! ACAATTTTACTGTTGCGCCA+AGG - chr4.3:36731537-36731556 MS.gene056610:CDS 40.0%
! CATGTCCAAAGGCTTTTATC+GGG - chr4.3:36733180-36733199 MS.gene056610:intron 40.0%
! CCATGTCCAAAGGCTTTTAT+CGG - chr4.3:36733179-36733198 MS.gene056610:intron 40.0%
! CTCGGGTAATAAGATTAGCT+AGG - chr4.3:36731566-36731585 MS.gene056610:CDS 40.0%
! CTGATTGTTGATGAAGCTCA+CGG - chr4.3:36732649-36732668 MS.gene056610:intron 40.0%
! GTAACGATAAAGGAGAGCAT+TGG - chr4.3:36733336-36733355 MS.gene056610:CDS 40.0%
!! AGTGAAGGTGCTGATATTAG+TGG - chr4.3:36733465-36733484 MS.gene056610:CDS 40.0%
!! GATAAAGGAGAGCATTGGTA+AGG - chr4.3:36733341-36733360 MS.gene056610:CDS 40.0%
!! GCTGTTTTCATAGGCTATTC+TGG - chr4.3:36730942-36730961 MS.gene056610:CDS 40.0%
!! TCATTGCAATGGGTTTTGTC+AGG - chr4.3:36731652-36731671 MS.gene056610:CDS 40.0%
!! TCTTTAGGTTGCTGAATGGA+AGG + chr4.3:36733231-36733250 None:intergenic 40.0%
AAACCAACAGTAAGCCGCAA+TGG + chr4.3:36733036-36733055 None:intergenic 45.0%
AAGACATGGTTTCTTGTCGG+AGG - chr4.3:36732055-36732074 MS.gene056610:CDS 45.0%
AAGCAGGTAACTAGGACTTG+TGG + chr4.3:36732851-36732870 None:intergenic 45.0%
ACAGGTATACCTGGAGGATA+TGG + chr4.3:36733387-36733406 None:intergenic 45.0%
AGAAATGAAGGAGACCTGAG+AGG + chr4.3:36730456-36730475 None:intergenic 45.0%
AGCATTGCACTGCCAGAATA+TGG - chr4.3:36731710-36731729 MS.gene056610:CDS 45.0%
ATAATGGCAACCTGTTCACC+AGG - chr4.3:36732103-36732122 MS.gene056610:intron 45.0%
ATCCAGGAACTCGAATTGGA+AGG - chr4.3:36732526-36732545 MS.gene056610:intron 45.0%
ATTCTCCCCAGTGCCAATTT+AGG - chr4.3:36730822-36730841 MS.gene056610:CDS 45.0%
CACTTTCCTGGACATAACAG+AGG - chr4.3:36731881-36731900 MS.gene056610:CDS 45.0%
CAGAAGAGGTTGTCAAGTTC+AGG + chr4.3:36731977-36731996 None:intergenic 45.0%
CAGCACCTTCACTTCTTACA+TGG + chr4.3:36733458-36733477 None:intergenic 45.0%
CCGATAAAAGCCTTTGGACA+TGG + chr4.3:36733182-36733201 None:intergenic 45.0%
CGTTAGAACGTCCAAGACTA+AGG - chr4.3:36731233-36731252 MS.gene056610:CDS 45.0%
CTCTCAGTAATAACCTCACC+GGG + chr4.3:36733417-36733436 None:intergenic 45.0%
GAGACCTGAGAGGAATAAGA+CGG + chr4.3:36730446-36730465 None:intergenic 45.0%
GAGACTGTTTGGAGAGCTTA+TGG + chr4.3:36731161-36731180 None:intergenic 45.0%
GATGCCAAAAGCAGGTAACT+AGG + chr4.3:36732859-36732878 None:intergenic 45.0%
GCATTGCACTGCCAGAATAT+GGG - chr4.3:36731711-36731730 MS.gene056610:CDS 45.0%
GCTTCTAATATGGGTCCTTG+GGG + chr4.3:36732001-36732020 None:intergenic 45.0%
GGATCAATTGCAGGAATGGT+CGG + chr4.3:36733015-36733034 None:intergenic 45.0%
GGGATCAATACAGGTATACC+TGG + chr4.3:36733396-36733415 None:intergenic 45.0%
GGTAACTAGGACTTGTGGTT+TGG + chr4.3:36732846-36732865 None:intergenic 45.0%
GGTGAACTGCTGCATTCATT+GGG + chr4.3:36731785-36731804 None:intergenic 45.0%
GTCTTCAGACTCGACTCTTA+AGG - chr4.3:36732422-36732441 MS.gene056610:intron 45.0%
GTGAACTGCTGCATTCATTG+GGG + chr4.3:36731784-36731803 None:intergenic 45.0%
GTGCTTCTAATATGGGTCCT+TGG + chr4.3:36732003-36732022 None:intergenic 45.0%
GTTGAGATCTAGCAGCATCT+AGG + chr4.3:36732882-36732901 None:intergenic 45.0%
GTTGTCAAGTTCAGGAAGCT+CGG + chr4.3:36731969-36731988 None:intergenic 45.0%
TCATCTATGCTGCACATGTC+AGG - chr4.3:36732775-36732794 MS.gene056610:intron 45.0%
TCTCAGTAATAACCTCACCG+GGG + chr4.3:36733416-36733435 None:intergenic 45.0%
TGCTATCCAGGAACTCGAAT+TGG - chr4.3:36732522-36732541 MS.gene056610:intron 45.0%
TGGGTTATCAGGTTACGAAG+CGG - chr4.3:36733065-36733084 MS.gene056610:intron 45.0%
TGGTGAACTGCTGCATTCAT+TGG + chr4.3:36731786-36731805 None:intergenic 45.0%
TTGTCAAGTTCAGGAAGCTC+GGG + chr4.3:36731968-36731987 None:intergenic 45.0%
! AATGTACTTAGGCACTGCAC+CGG + chr4.3:36732188-36732207 None:intergenic 45.0%
! GACTTGTGGTTTGGAGAGTT+TGG + chr4.3:36732837-36732856 None:intergenic 45.0%
! GATTCCGTCTTATTCCTCTC+AGG - chr4.3:36730439-36730458 MS.gene056610:CDS 45.0%
! GGTATACCTGTATTGATCCC+CGG - chr4.3:36733396-36733415 MS.gene056610:intron 45.0%
! GTTGGTGTCTATGTTGTGTC+CGG + chr4.3:36731028-36731047 None:intergenic 45.0%
! TATGGGAAATACGAGAGCGT+TGG - chr4.3:36731728-36731747 MS.gene056610:CDS 45.0%
! TGGGAAGGTGAAAACCGTTT+TGG + chr4.3:36730296-36730315 None:intergenic 45.0%
! TGTAATCATAGGCGTCGTGT+CGG - chr4.3:36731091-36731110 MS.gene056610:CDS 45.0%
! TTCCTTCCAATTCGAGTTCC+TGG + chr4.3:36732531-36732550 None:intergenic 45.0%
! TTTATCGGCTATATCGGCCA+TGG - chr4.3:36732156-36732175 MS.gene056610:intron 45.0%
!! AGAGCATTGGTAAGGTTTCG+GGG - chr4.3:36733349-36733368 MS.gene056610:CDS 45.0%
!! ATGGGAAATACGAGAGCGTT+GGG - chr4.3:36731729-36731748 MS.gene056610:CDS 45.0%
!! GAGAGCATTGGTAAGGTTTC+GGG - chr4.3:36733348-36733367 MS.gene056610:CDS 45.0%
!! GGAGAGCATTGGTAAGGTTT+CGG - chr4.3:36733347-36733366 MS.gene056610:CDS 45.0%
!! TCCGTCTTTAGGTTGCTGAA+TGG + chr4.3:36733235-36733254 None:intergenic 45.0%
!! TGCTCTGGTGGTATTGACTT+GGG - chr4.3:36730762-36730781 MS.gene056610:CDS 45.0%
!! TTGTCGGAGGTACTACTTGT+GGG - chr4.3:36732068-36732087 MS.gene056610:intron 45.0%
!! TTTTGGGAGCTTGGGTTATC+AGG - chr4.3:36733054-36733073 MS.gene056610:intron 45.0%
!!! ACTGTTGGTTTTTGGGAGCT+TGG - chr4.3:36733045-36733064 MS.gene056610:intron 45.0%
!!! CTGTTGGTTTTTGGGAGCTT+GGG - chr4.3:36733046-36733065 MS.gene056610:intron 45.0%
!!! GCGGCTTACTGTTGGTTTTT+GGG - chr4.3:36733038-36733057 MS.gene056610:intron 45.0%
!!! TGCGGCTTACTGTTGGTTTT+TGG - chr4.3:36733037-36733056 MS.gene056610:intron 45.0%
AATGATTGGGACATCGCTGG+TGG - chr4.3:36732223-36732242 MS.gene056610:intron 50.0%
AGCCCACCTAAATTGGCACT+GGG + chr4.3:36730831-36730850 None:intergenic 50.0%
AGCCGCAATGGATCAATTGC+AGG + chr4.3:36733024-36733043 None:intergenic 50.0%
AGGTACTACTTGTGGGATCC+AGG - chr4.3:36732075-36732094 MS.gene056610:intron 50.0%
AGGTTGCCATTATTGCTGCC+TGG + chr4.3:36732096-36732115 None:intergenic 50.0%
ATACCTGCAACACCAACCAC+AGG + chr4.3:36732498-36732517 None:intergenic 50.0%
CACTGCACCGGATAATACCA+TGG + chr4.3:36732176-36732195 None:intergenic 50.0%
CATCTAGGGATGCCAAAAGC+AGG + chr4.3:36732867-36732886 None:intergenic 50.0%
CTTGTAGGGACCATGTCCAA+AGG - chr4.3:36733169-36733188 MS.gene056610:intron 50.0%
GATCCATTGCGGCTTACTGT+TGG - chr4.3:36733030-36733049 MS.gene056610:intron 50.0%
TAGCCCACCTAAATTGGCAC+TGG + chr4.3:36730832-36730851 None:intergenic 50.0%
TCAAACCTGAGACCTCGAGT+AGG + chr4.3:36730803-36730822 None:intergenic 50.0%
TCCAATGAGTCGAGTCATCG+AGG + chr4.3:36731921-36731940 None:intergenic 50.0%
TCCCCAGTGCCAATTTAGGT+GGG - chr4.3:36730826-36730845 MS.gene056610:CDS 50.0%
TGAAGCACAGACACAGACAC+CGG - chr4.3:36731006-36731025 MS.gene056610:CDS 50.0%
TGGGATCCAGGCAGCAATAA+TGG - chr4.3:36732087-36732106 MS.gene056610:intron 50.0%
! GGCAGCATTTTCTTCAGCTG+AGG + chr4.3:36731855-36731874 None:intergenic 50.0%
!! CTGCTCTGGTGGTATTGACT+TGG - chr4.3:36730761-36730780 MS.gene056610:CDS 50.0%
!! CTTGTCGGAGGTACTACTTG+TGG - chr4.3:36732067-36732086 MS.gene056610:intron 50.0%
!! GAGCATTGGTAAGGTTTCGG+GGG - chr4.3:36733350-36733369 MS.gene056610:CDS 50.0%
!! GCAGGTATTGAGTGCTATCC+AGG - chr4.3:36732510-36732529 MS.gene056610:intron 50.0%
!! GTGGTATTGACTTGGGACCT+GGG - chr4.3:36730769-36730788 MS.gene056610:CDS 50.0%
!! TATCATCGGTGTTGGCGTGT+TGG + chr4.3:36731046-36731065 None:intergenic 50.0%
!! TCTCAAGCACTGAGATGCCA+GGG + chr4.3:36732981-36733000 None:intergenic 50.0%
!! TGGTGGTGTCACTCCATTAC+AGG - chr4.3:36732240-36732259 MS.gene056610:intron 50.0%
!! TTCTCAAGCACTGAGATGCC+AGG + chr4.3:36732982-36733001 None:intergenic 50.0%
!! TTTCCTGTGGTTGGTGTTGC+AGG - chr4.3:36732492-36732511 MS.gene056610:intron 50.0%
!!! GCTGCCACTTTTCACTTTCC+TGG - chr4.3:36731869-36731888 MS.gene056610:CDS 50.0%
AAAATGGTCGGACCCCTTCC+CGG + chr4.3:36731432-36731451 None:intergenic 55.0%
ACAAAGCTCCCGCATACGCA+GGG - chr4.3:36731405-36731424 MS.gene056610:intron 55.0%
ACCTCACCGGGGATCAATAC+AGG + chr4.3:36733405-36733424 None:intergenic 55.0%
ATGAGTCGAGTCATCGAGGC+AGG + chr4.3:36731917-36731936 None:intergenic 55.0%
CACAGACACTCCTCAGACGT+CGG + chr4.3:36731126-36731145 None:intergenic 55.0%
CTCCCCAGTGCCAATTTAGG+TGG - chr4.3:36730825-36730844 MS.gene056610:CDS 55.0%
CTGTTAGATCAGCCCCTTGC+TGG + chr4.3:36732717-36732736 None:intergenic 55.0%
GAAGCTCACGGTGCACATCT+AGG - chr4.3:36732661-36732680 MS.gene056610:intron 55.0%
GACAACCTCTTCTGTCCCCA+AGG - chr4.3:36731983-36732002 MS.gene056610:CDS 55.0%
GCATGGCCTCTGTTATGTCC+AGG + chr4.3:36731890-36731909 None:intergenic 55.0%
GCCCACCTAAATTGGCACTG+GGG + chr4.3:36730830-36730849 None:intergenic 55.0%
GCCTCGATGACTCGACTCAT+TGG - chr4.3:36731917-36731936 MS.gene056610:CDS 55.0%
TAGATCAGCCCCTTGCTGGA+GGG + chr4.3:36732713-36732732 None:intergenic 55.0%
TATTACCCGAGGGGAAGCCT+TGG + chr4.3:36731557-36731576 None:intergenic 55.0%
TCACCAGAGCTTCAGCAGAG+TGG - chr4.3:36731800-36731819 MS.gene056610:CDS 55.0%
TTAGATCAGCCCCTTGCTGG+AGG + chr4.3:36732714-36732733 None:intergenic 55.0%
TTGAAAGGGGACGACGAGAG+TGG + chr4.3:36730263-36730282 None:intergenic 55.0%
! ACCTGTATTGATCCCCGGTG+AGG - chr4.3:36733401-36733420 MS.gene056610:intron 55.0%
! ATGCGGGAGCTTTGTGCATC+AGG + chr4.3:36731400-36731419 None:intergenic 55.0%
!! GGTGGTATTGACTTGGGACC+TGG - chr4.3:36730768-36730787 MS.gene056610:CDS 55.0%
ACCACCAGAGCAGCCCAACT+GGG + chr4.3:36730754-36730773 None:intergenic 60.0%
AGGCCACTCTGCTGAAGCTC+TGG + chr4.3:36731806-36731825 None:intergenic 60.0%
CACAAAGCTCCCGCATACGC+AGG - chr4.3:36731404-36731423 MS.gene056610:intron 60.0%
CTAGCTCAGCCCTCCAGCAA+GGG - chr4.3:36732701-36732720 MS.gene056610:intron 60.0%
GTAACCCAGTTGGGCTGCTC+TGG - chr4.3:36730747-36730766 MS.gene056610:CDS 60.0%
GTGCTCCTACTCGAGGTCTC+AGG - chr4.3:36730795-36730814 MS.gene056610:CDS 60.0%
GTGTCGAACACCGACGTCTG+AGG - chr4.3:36731113-36731132 MS.gene056610:CDS 60.0%
TACCACCAGAGCAGCCCAAC+TGG + chr4.3:36730755-36730774 None:intergenic 60.0%
TAGCTCAGCCCTCCAGCAAG+GGG - chr4.3:36732702-36732721 MS.gene056610:intron 60.0%
TCGAGTCATCGAGGCAGGAG+CGG + chr4.3:36731912-36731931 None:intergenic 60.0%
TGGGTCCTTGGGGACAGAAG+AGG + chr4.3:36731991-36732010 None:intergenic 60.0%
! GGGAAGGGGTCCGACCATTT+TGG - chr4.3:36731431-36731450 MS.gene056610:intron 60.0%
! TCGAGTAGGAGCACACTCCC+AGG + chr4.3:36730789-36730808 None:intergenic 60.0%
! TGGGAGTGTGCTCCTACTCG+AGG - chr4.3:36730788-36730807 MS.gene056610:CDS 60.0%
ACCCAGTTGGGCTGCTCTGG+TGG - chr4.3:36730750-36730769 MS.gene056610:CDS 65.0%
CATACGCAGGGTCCGGGAAG+GGG - chr4.3:36731417-36731436 MS.gene056610:intron 65.0%
CCTAGCTCAGCCCTCCAGCA+AGG - chr4.3:36732700-36732719 MS.gene056610:intron 65.0%
CCTTGCTGGAGGGCTGAGCT+AGG + chr4.3:36732703-36732722 None:intergenic 65.0%
CTTCCCGGACCCTGCGTATG+CGG + chr4.3:36731417-36731436 None:intergenic 65.0%
GCATACGCAGGGTCCGGGAA+GGG - chr4.3:36731416-36731435 MS.gene056610:intron 65.0%
GTTGCGCCAAGGCTTCCCCT+CGG - chr4.3:36731548-36731567 MS.gene056610:CDS 65.0%
TCATCGAGGCAGGAGCGGCA+TGG + chr4.3:36731907-36731926 None:intergenic 65.0%
TTCCCGGACCCTGCGTATGC+GGG + chr4.3:36731416-36731435 None:intergenic 65.0%
TTGCGCCAAGGCTTCCCCTC+GGG - chr4.3:36731549-36731568 MS.gene056610:CDS 65.0%
CGCATACGCAGGGTCCGGGA+AGG - chr4.3:36731415-36731434 MS.gene056610:intron 70.0%
CTCCCGCATACGCAGGGTCC+GGG - chr4.3:36731411-36731430 MS.gene056610:intron 70.0%
GCTCCCGCATACGCAGGGTC+CGG - chr4.3:36731410-36731429 MS.gene056610:intron 70.0%


Chromosome Type Strat End Strand Name
chr4.3 gene 36730230 36733554 36730230 ID=MS.gene056610
chr4.3 mRNA 36730230 36733554 36730230 ID=MS.gene056610.t1;Parent=MS.gene056610
chr4.3 exon 36733462 36733554 36733462 ID=MS.gene056610.t1.exon1;Parent=MS.gene056610.t1
chr4.3 CDS 36733462 36733554 36733462 ID=cds.MS.gene056610.t1;Parent=MS.gene056610.t1
chr4.3 exon 36733324 36733383 36733324 ID=MS.gene056610.t1.exon2;Parent=MS.gene056610.t1
chr4.3 CDS 36733324 36733383 36733324 ID=cds.MS.gene056610.t1;Parent=MS.gene056610.t1
chr4.3 exon 36731523 36732080 36731523 ID=MS.gene056610.t1.exon3;Parent=MS.gene056610.t1
chr4.3 CDS 36731523 36732080 36731523 ID=cds.MS.gene056610.t1;Parent=MS.gene056610.t1
chr4.3 exon 36730230 36731270 36730230 ID=MS.gene056610.t1.exon4;Parent=MS.gene056610.t1
chr4.3 CDS 36730230 36731270 36730230 ID=cds.MS.gene056610.t1;Parent=MS.gene056610.t1
Gene Sequence

>MS.gene056610

ATGGTGTATATTTCGTTCTCACTATTACTTCCACTCTCGTCGTCCCCTTTCAATCCCAAAAATCCAAAACGGTTTTCACCTTCCCATTTTTCAGTAAGTGCTAACCACAAAATCTTTCTTCTTCTGTTTCTAACTTCACACTTCTCATTTTCCTTTTCTGTTTATTTGCAGGGACGTCCTTACAAATTGAATTTCAGGACTTCATTGACGATTCCGTCTTATTCCTCTCAGGTCTCCTTCATTTCTTATTTTAAATACTAATAATAATAGCTTATGTACACGTTTGGGTAAACTATTTAATTAACCGTTTATCATATGAGTAATGATATTTTGACATCCATTTAATGACAACTTTTTTGACAACCTTAGTTTTTTCACTTTTTATTGGTCAAAAACAATGGAGGGAGAAAAAAGAAGAGAGAGGATAACAACATCATGTGAGTATGAGAGAGAAAGTTGTTCAAAAGTTGTCAAAAAGTGGTTGTCAAAATATCATTTCTCTTATGTATGTGTTTTTGTAACCCAGTTGGGCTGCTCTGGTGGTATTGACTTGGGACCTGGGAGTGTGCTCCTACTCGAGGTCTCAGGTTTGATTCTCCCCAGTGCCAATTTAGGTGGGCTAATTTAGCTTCTTCAAAAAAATGTATGTGTTTCTGTATATATAGGCTATTTCTAAAACAAAAAAGATAAACTATTTTCATATAAGCTATAAGCTGTTTTCATAGGCTATTCTGGAGAGCTTACTGAAATAAGCTGAAAACAACTTTTGGACATGATGAAGCACAGACACAGACACCGGACACAACATAGACACCAACACGCCAACACCGATGATAATTTGAAAAAAATGATATAATTTAGTGTAATCATAGGCGTCGTGTCGGTGTCGAACACCGACGTCTGAGGAGTGTCTGTGCTTCATTTGTTTCCATAAGCTCTCCAAACAGTCTCACAAGTGTTTATGTCGAAAGATAAGCTTAAATAAGTCAATCCAAACAGTCTTCGTTAGAACGTCCAAGACTAAGGTAAAAAGATATGGGCGTAAAATTGATCTTTGGTGCAGTCCTATATGATTAGAAATTTATATACACTTTGTTTACACTATAATGTATATGTTATAATTTTTAATGTAGTTTAGTTGGGGTAATAAGATTAGCTAAAGGGTAGCCTGATGCACAAAGCTCCCGCATACGCAGGGTCCGGGAAGGGGTCCGACCATTTTGGTGTATTATACACAACCTTACCCTGTTTTTTACACAAGAGGCTGTTTCTAAGACTTGTACTCGTGACCTTTCAGTCAGATGACCACAATTTTACTGTTGCGCCAAGGCTTCCCCTCGGGTAATAAGATTAGCTAGGCCTGAATTAAAATGAAATGTTGTTTATCCATTAGTACTGCCTCATTATGACCTACACTATCCTTCATTGCAATGGGTTTTGTCAGGCAGTAACAATTCTTTAAATTATTTTACAGCAAAGAAGCATTGCACTGCCAGAATATGGGAAATACGAGAGCGTTGGGACAGTGAGCACTGAATCAATCACAAACAACCCCAATGAATGCAGCAGTTCACCAGAGCTTCAGCAGAGTGGCCTACCTCCTTTAGTTAGTGCATTGAAAGCCTCAGCTGAAGAAAATGCTGCCACTTTTCACTTTCCTGGACATAACAGAGGCCATGCCGCTCCTGCCTCGATGACTCGACTCATTGGAAGAAGACCATATGCTCATGATTTACCCGAGCTTCCTGAACTTGACAACCTCTTCTGTCCCCAAGGACCCATATTAGAAGCACAAACAGAAGCAGCCAAATTGTTTGGATCATCAAAGACATGGTTTCTTGTCGGAGGTACTACTTGTGGGATCCAGGCAGCAATAATGGCAACCTGTTCACCAGGAGAATTTCTTATTCTTCCTCGAAATTGTCATTTATCGGCTATATCGGCCATGGTATTATCCGGTGCAGTGCCTAAGTACATTGTTCCTGACTATAAAAATGATTGGGACATCGCTGGTGGTGTCACTCCATTACAGGTGATTCAGTTATTATTATACACTATCACAATTTGGCTATATTCTCTAAAAATTGGTGATAAAAGAAATTGACATGTTAGCGTCGCAGTTATTATACACAAGATGAGTTTTTCCTGATTACATGATTTTCTTACTGTCCTCGACAATGATATTAGATATTGTCTTCAGACTCGACTCTTAAGGTAATCCTATCTAATGTTGTTCTCTTTCTCTTGTTTTTTTTTCTTTCTTTTCCTGTGGTTGGTGTTGCAGGTATTGAGTGCTATCCAGGAACTCGAATTGGAAGGAAAAAAAGCAGCAGCAGTTTTCATCACTTCACCTACTTATCATGGTATTTGCAGTAACTTGAGCGACATTTCTGAGTTGTGTCATTACCGTAAAATTCCTCTGATTGTTGATGAAGCTCACGGTGCACATCTAGGATTTCATTCTGAACTGCCTAGCTCAGCCCTCCAGCAAGGGGCTGATCTAACAGTACAGTCTACTCACAAGGTTCTTTGCTCTCTTACTCAGTCATCTATGCTGCACATGTCAGGTGACATTGTAGATAAAGAAAAAATATCTAGGTGTCTCCAAACTCTCCAAACCACAAGTCCTAGTTACCTGCTTTTGGCATCCCTAGATGCTGCTAGATCTCAACTTAGTGAAAGCCCTGATACTGTATTCAACCAAGCGATTAAATTAGCAAATGAAGCAAAGTGCTCTCTTAAACAATTCCCTGGCATCTCAGTGCTTGAGAATTCAAGCTTTCCGACCATTCCTGCAATTGATCCATTGCGGCTTACTGTTGGTTTTTGGGAGCTTGGGTTATCAGGTTACGAAGCGGATGAAATCTTATATCGGGATTTCGGAATTGTTTGTGAACTCGTTGGGAATAAATCTATCACTTATGCACTTAATCTTGGAACTTGTAGGGACCATGTCCAAAGGCTTTTATCGGGAATAAAGCATCTAGCTGCAACATATCCTTCCATTCAGCAACCTAAAGACGGAGTACTTACTGAACGCGCACCCTTTGATGATATAATCACGAGCTTGACCCCCAGAGATGCATTTTTTGCAAGTAAAAGAAAAGTAACGATAAAGGAGAGCATTGGTAAGGTTTCGGGGGAGCTTATTTGTCCATATCCTCCAGGTATACCTGTATTGATCCCCGGTGAGGTTATTACTGAGAGAGCCGTCAATTATCTACTCCATGTAAGAAGTGAAGGTGCTGATATTAGTGGAGCATCTGATCCCTTACTTTCTTCTATAGTTGTCTGCGATGTACATAAAAAACAGCCGGTCTCATAA

Protein sequence

>MS.gene056610.t1

MVYISFSLLLPLSSSPFNPKNPKRFSPSHFSGRPYKLNFRTSLTIPSYSSQQRSIALPEYGKYESVGTVSTESITNNPNECSSSPELQQSGLPPLVSALKASAEENAATFHFPGHNRGHAAPASMTRLIGRRPYAHDLPELPELDNLFCPQGPILEAQTEAAKLFGSSKTWFLVGGTTCGIQAAIMATCSPGEFLILPRNCHLSAISAMVLSGAVPKYIVPDYKNDWDIAGGVTPLQVLSAIQELELEGKKAAAVFITSPTYHGICSNLSDISELCHYRKIPLIVDEAHGAHLGFHSELPSSALQQGADLTVQSTHKVLCSLTQSSMLHMSGDIVDKEKISRCLQTLQTTSPSYLLLASLDAARSQLSESPDTVFNQAIKLANEAKCSLKQFPGISVLENSSFPTIPAIDPLRLTVGFWELGLSGYEADEILYRDFGIVCELVGNKSITYALNLGTCRDHVQRLLSGIKHLAATYPSIQQPKDGVLTERAPFDDIITSLTPRDAFFASKRKVTIKESIGKVSGELICPYPPGIPVLIPGEVITERAVNYLLHVRSEGADISGASDPLLSSIVVCDVHKKQPVS