Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58772.t1 | XP_003609510.1 | 97.1 | 485 | 14 | 0 | 1 | 485 | 1 | 485 | 1.50E-255 | 891.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58772.t1 | G7JHS8 | 97.1 | 485 | 14 | 0 | 1 | 485 | 1 | 485 | 1.1e-255 | 891.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049328 | MS.gene58772 | 0.807036 | 6.15E-50 | -1.69E-46 |
| MS.gene049397 | MS.gene58772 | 0.837095 | 6.36E-57 | -1.69E-46 |
| MS.gene04985 | MS.gene58772 | 0.800723 | 1.26E-48 | -1.69E-46 |
| MS.gene049989 | MS.gene58772 | 0.88774 | 1.09E-72 | -1.69E-46 |
| MS.gene050297 | MS.gene58772 | 0.886351 | 3.69E-72 | -1.69E-46 |
| MS.gene050310 | MS.gene58772 | 0.814366 | 1.60E-51 | -1.69E-46 |
| MS.gene050648 | MS.gene58772 | 0.852491 | 4.46E-61 | -1.69E-46 |
| MS.gene051067 | MS.gene58772 | 0.810805 | 9.60E-51 | -1.69E-46 |
| MS.gene051094 | MS.gene58772 | 0.868594 | 5.82E-66 | -1.69E-46 |
| MS.gene051263 | MS.gene58772 | 0.822301 | 2.55E-53 | -1.69E-46 |
| MS.gene051629 | MS.gene58772 | 0.843678 | 1.21E-58 | -1.69E-46 |
| MS.gene051742 | MS.gene58772 | 0.804405 | 2.19E-49 | -1.69E-46 |
| MS.gene051955 | MS.gene58772 | 0.802414 | 5.67E-49 | -1.69E-46 |
| MS.gene052041 | MS.gene58772 | 0.802591 | 5.22E-49 | -1.69E-46 |
| MS.gene052367 | MS.gene58772 | 0.849054 | 4.14E-60 | -1.69E-46 |
| MS.gene052731 | MS.gene58772 | 0.820269 | 7.50E-53 | -1.69E-46 |
| MS.gene053416 | MS.gene58772 | 0.836419 | 9.46E-57 | -1.69E-46 |
| MS.gene053417 | MS.gene58772 | 0.840364 | 9.09E-58 | -1.69E-46 |
| MS.gene05369 | MS.gene58772 | 0.830077 | 3.60E-55 | -1.69E-46 |
| MS.gene053929 | MS.gene58772 | 0.808128 | 3.61E-50 | -1.69E-46 |
| MS.gene055411 | MS.gene58772 | 0.80148 | 8.83E-49 | -1.69E-46 |
| MS.gene055781 | MS.gene58772 | 0.819659 | 1.03E-52 | -1.69E-46 |
| MS.gene055957 | MS.gene58772 | 0.812615 | 3.88E-51 | -1.69E-46 |
| MS.gene056041 | MS.gene58772 | 0.816077 | 6.66E-52 | -1.69E-46 |
| MS.gene056042 | MS.gene58772 | 0.804163 | 2.46E-49 | -1.69E-46 |
| MS.gene056520 | MS.gene58772 | 0.815332 | 9.76E-52 | -1.69E-46 |
| MS.gene056526 | MS.gene58772 | 0.812384 | 4.36E-51 | -1.69E-46 |
| MS.gene057004 | MS.gene58772 | 0.824518 | 7.73E-54 | -1.69E-46 |
| MS.gene057483 | MS.gene58772 | 0.800036 | 1.74E-48 | -1.69E-46 |
| MS.gene058196 | MS.gene58772 | 0.861637 | 8.92E-64 | -1.69E-46 |
| MS.gene058197 | MS.gene58772 | 0.877056 | 8.53E-69 | -1.69E-46 |
| MS.gene058198 | MS.gene58772 | 0.878535 | 2.60E-69 | -1.69E-46 |
| MS.gene059300 | MS.gene58772 | 0.898287 | 6.15E-77 | -1.69E-46 |
| MS.gene060473 | MS.gene58772 | 0.856437 | 3.22E-62 | -1.69E-46 |
| MS.gene060565 | MS.gene58772 | 0.855739 | 5.15E-62 | -1.69E-46 |
| MS.gene06057 | MS.gene58772 | 0.874206 | 8.09E-68 | -1.69E-46 |
| MS.gene061260 | MS.gene58772 | 0.83215 | 1.11E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58772.t1 | MTR_4g116470 | 97.320 | 485 | 13 | 0 | 1 | 485 | 1 | 485 | 0.0 | 977 |
| MS.gene58772.t1 | MTR_8g014610 | 81.818 | 66 | 12 | 0 | 137 | 202 | 75 | 140 | 7.43e-24 | 105 |
| MS.gene58772.t1 | MTR_4g116465 | 63.462 | 52 | 15 | 2 | 432 | 483 | 21 | 68 | 4.32e-14 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 87 sgRNAs with CRISPR-Local
Find 135 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCACCACCGCTTTCCTTTGC+TGG | 0.184984 | 8.3:-9480583 | None:intergenic |
| CCGCTTTCCTTTGCTGGTTT+CGG | 0.229591 | 8.3:-9480577 | None:intergenic |
| AAGATTACCATTCTTCTAAA+AGG | 0.245256 | 8.3:+9480230 | MS.gene58772:CDS |
| TTCTTGATCAACTTGGTATC+TGG | 0.246984 | 8.3:-9480856 | None:intergenic |
| ACTCACGAAAATTTAAGATT+TGG | 0.253055 | 8.3:-9481233 | None:intergenic |
| TTATGAAACAAAGTCCTAAA+TGG | 0.256561 | 8.3:-9480622 | None:intergenic |
| TTCAATCCGACAACATTAAA+TGG | 0.266143 | 8.3:+9479901 | MS.gene58772:CDS |
| CAAGGAGAATTTGAACTCTA+AGG | 0.276155 | 8.3:+9480393 | MS.gene58772:CDS |
| GTTCTGGAGGAGAAGAAATA+AGG | 0.277590 | 8.3:-9480028 | None:intergenic |
| TCAGCATAACCATGCGAAAA+TGG | 0.289824 | 8.3:-9481702 | None:intergenic |
| CTCACGAAAATTTAAGATTT+GGG | 0.302792 | 8.3:-9481232 | None:intergenic |
| CGTCGAAGAGGAAACCATTT+AGG | 0.312893 | 8.3:+9480608 | MS.gene58772:CDS |
| TCAGCTTTGAAACAGATTAA+AGG | 0.321217 | 8.3:+9480433 | MS.gene58772:CDS |
| ATGATGGGGTGTTCTTGTTC+TGG | 0.330881 | 8.3:-9480044 | None:intergenic |
| TGTCCAACGCTTTGAGTTGC+CGG | 0.351486 | 8.3:-9481601 | None:intergenic |
| TGAAGGGAAAACTATTCTTA+TGG | 0.353653 | 8.3:+9480540 | MS.gene58772:CDS |
| AGCAATTTCTACAAGAATTC+CGG | 0.363796 | 8.3:+9481350 | MS.gene58772:CDS |
| TGTGCTGGATGTGGTGAAAA+AGG | 0.365765 | 8.3:+9481515 | MS.gene58772:CDS |
| TTGTGCTGCTAAGTTCTGTC+TGG | 0.376695 | 8.3:-9481208 | None:intergenic |
| GGTTTGATGGATTGAAGAAT+TGG | 0.381027 | 8.3:+9480719 | MS.gene58772:CDS |
| ATTTAGGACTTTGTTTCATA+AGG | 0.394361 | 8.3:+9480624 | MS.gene58772:CDS |
| ATGAAGAGTTGAGTAGTAAG+TGG | 0.408973 | 8.3:-9479790 | None:intergenic |
| AAGCTTGTCTCTTATTATGA+TGG | 0.411561 | 8.3:-9480060 | None:intergenic |
| TTTGAAGTTGAAAGGAAGAA+TGG | 0.411584 | 8.3:-9479838 | None:intergenic |
| TTGTTGCCATTTAATGTTGT+CGG | 0.414582 | 8.3:-9479907 | None:intergenic |
| TTTGCAAGAGCAGTTGGTGA+TGG | 0.440962 | 8.3:+9480832 | MS.gene58772:CDS |
| GAATTGGAAGAGAAATGAAT+TGG | 0.446627 | 8.3:+9480735 | MS.gene58772:CDS |
| CAACTTCTTCTTGATCAACT+TGG | 0.448682 | 8.3:-9480863 | None:intergenic |
| ACAGATTAAAGGAGCAGCTT+CGG | 0.449986 | 8.3:+9480444 | MS.gene58772:CDS |
| TTCTGGAGGAGAAGAAATAA+GGG | 0.465428 | 8.3:-9480027 | None:intergenic |
| AGCTTGTCTCTTATTATGAT+GGG | 0.465581 | 8.3:-9480059 | None:intergenic |
| ACTGCTAACCTTTGCACCAA+TGG | 0.474150 | 8.3:-9480253 | None:intergenic |
| CCATTCTTCTAAAAGGCCAT+TGG | 0.477565 | 8.3:+9480237 | MS.gene58772:CDS |
| GTAGTAAGTGGGTGTGTAGT+TGG | 0.482252 | 8.3:-9479778 | None:intergenic |
| CATAGAGAGGGAAATGGCGG+TGG | 0.484301 | 8.3:+9480649 | MS.gene58772:CDS |
| CTAAAAGGCCATTGGTGCAA+AGG | 0.490692 | 8.3:+9480245 | MS.gene58772:CDS |
| TTTGGGAAACAACATAAAGA+AGG | 0.496221 | 8.3:+9481172 | MS.gene58772:CDS |
| AGGTCATGGTGTGACAAGTA+TGG | 0.503532 | 8.3:+9481486 | MS.gene58772:intron |
| CTATCAGATCTTTGATTCAA+AGG | 0.504322 | 8.3:-9480781 | None:intergenic |
| GACCCATCAAGTTCAAAACT+TGG | 0.504455 | 8.3:-9479941 | None:intergenic |
| TCAAGAGAAAGACATTTGTC+CGG | 0.505669 | 8.3:+9481582 | MS.gene58772:CDS |
| TGGTGATGTTGTGCTGGATG+TGG | 0.505812 | 8.3:+9481506 | MS.gene58772:CDS |
| CAAGTATGGTGATGTTGTGC+TGG | 0.508284 | 8.3:+9481500 | MS.gene58772:CDS |
| TGTAAAAGAGAATTCTGAAG+AGG | 0.508351 | 8.3:+9480327 | MS.gene58772:CDS |
| GTGGTCTGTGATTGATTTGA+AGG | 0.508732 | 8.3:+9480351 | MS.gene58772:CDS |
| CTTTCCTTTGCTGGTTTCGG+AGG | 0.508857 | 8.3:-9480574 | None:intergenic |
| TTGCAAGAGCAGTTGGTGAT+GGG | 0.511642 | 8.3:+9480833 | MS.gene58772:CDS |
| TCACTTTGTTGTTTATGCAA+AGG | 0.511656 | 8.3:-9480520 | None:intergenic |
| GATCTTTGATTCAAAGGCAA+AGG | 0.513475 | 8.3:-9480775 | None:intergenic |
| CCAGCAAAGGAAAGCGGTGG+TGG | 0.520086 | 8.3:+9480583 | MS.gene58772:CDS |
| TTCAAATCAGACTTATCCAC+CGG | 0.525206 | 8.3:-9481369 | None:intergenic |
| AAGGAGCATAGAGAGGGAAA+TGG | 0.536239 | 8.3:+9480643 | MS.gene58772:CDS |
| AAGGAGAATTTGAACTCTAA+GGG | 0.536500 | 8.3:+9480394 | MS.gene58772:CDS |
| AAGAAGAAGTTGCATTCTGA+TGG | 0.539287 | 8.3:+9480874 | MS.gene58772:CDS |
| TGAAGAGTTGAGTAGTAAGT+GGG | 0.543506 | 8.3:-9479789 | None:intergenic |
| CTTTGTTGTTTATGCAAAGG+AGG | 0.546200 | 8.3:-9480517 | None:intergenic |
| ATGGTTATGCTGAGAGTACA+TGG | 0.553105 | 8.3:+9481712 | MS.gene58772:CDS |
| TTGATGGGTCTTCACAAAGA+AGG | 0.556368 | 8.3:+9479954 | MS.gene58772:CDS |
| TGATAAGAGTTTGATGAACA+AGG | 0.558343 | 8.3:+9480375 | MS.gene58772:CDS |
| GTGCAAAGGTTAGCAGTACA+AGG | 0.558986 | 8.3:+9480259 | MS.gene58772:CDS |
| GATGCTAGAGATGTGATCGC+AGG | 0.559667 | 8.3:+9480292 | MS.gene58772:CDS |
| GACAATCTATGTTCTGCAGA+AGG | 0.562579 | 8.3:-9479873 | None:intergenic |
| GGGAAATGGCGGTGGGTCTG+AGG | 0.563164 | 8.3:+9480657 | MS.gene58772:CDS |
| TGTCCGGCAACTCAAAGCGT+TGG | 0.564089 | 8.3:+9481598 | MS.gene58772:CDS |
| TTGCATAAACAACAAAGTGA+AGG | 0.566433 | 8.3:+9480523 | MS.gene58772:CDS |
| TTTCATAAGGAGCATAGAGA+GGG | 0.572068 | 8.3:+9480637 | MS.gene58772:CDS |
| TGCAAACAGCAATGATCAGA+TGG | 0.577028 | 8.3:+9481326 | MS.gene58772:intron |
| TGCATAAACAACAAAGTGAA+GGG | 0.586261 | 8.3:+9480524 | MS.gene58772:CDS |
| TCTAAGGGAAAATCAAGTCA+TGG | 0.589460 | 8.3:+9480409 | MS.gene58772:CDS |
| ATGGGGTGTTCTTGTTCTGG+AGG | 0.602140 | 8.3:-9480041 | None:intergenic |
| CCATCAAGTTCAAAACTTGG+TGG | 0.605099 | 8.3:-9479938 | None:intergenic |
| GCTTGTCTCTTATTATGATG+GGG | 0.610177 | 8.3:-9480058 | None:intergenic |
| ATGCTAGAGATGTGATCGCA+GGG | 0.616522 | 8.3:+9480293 | MS.gene58772:CDS |
| GTTTCATAAGGAGCATAGAG+AGG | 0.616807 | 8.3:+9480636 | MS.gene58772:CDS |
| GCGGTGGTGGTTCGTCGAAG+AGG | 0.628194 | 8.3:+9480596 | MS.gene58772:CDS |
| AAGAGAATTCTGAAGAGGAG+TGG | 0.634631 | 8.3:+9480332 | MS.gene58772:CDS |
| AGGGAAAACTATTCTTATGG+AGG | 0.639054 | 8.3:+9480543 | MS.gene58772:CDS |
| CCGAAACCAGCAAAGGAAAG+CGG | 0.649904 | 8.3:+9480577 | MS.gene58772:CDS |
| ATAGAGAGGGAAATGGCGGT+GGG | 0.650035 | 8.3:+9480650 | MS.gene58772:CDS |
| TGAGCCTCCGAAACCAGCAA+AGG | 0.650047 | 8.3:+9480570 | MS.gene58772:CDS |
| CTGAGGTAGAACAAAGAGGA+GGG | 0.655821 | 8.3:+9480674 | MS.gene58772:CDS |
| TCTGAGGTAGAACAAAGAGG+AGG | 0.661547 | 8.3:+9480673 | MS.gene58772:CDS |
| GAATCAAAGATCTGATAGCG+AGG | 0.664604 | 8.3:+9480786 | MS.gene58772:CDS |
| AATTTCTACAAGAATTCCGG+TGG | 0.667726 | 8.3:+9481353 | MS.gene58772:CDS |
| GAGCATAGAGAGGGAAATGG+CGG | 0.674277 | 8.3:+9480646 | MS.gene58772:CDS |
| AAACCAGCAAAGGAAAGCGG+TGG | 0.686736 | 8.3:+9480580 | MS.gene58772:CDS |
| GGGTCTGAGGTAGAACAAAG+AGG | 0.686892 | 8.3:+9480670 | MS.gene58772:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAGCAAAAAGTTAAAAA+TGG | - | chr8.3:9480146-9480165 | None:intergenic | 15.0% |
| !! | TTTGTTTGTGATTTATTAAT+AGG | + | chr8.3:9481148-9481167 | MS.gene58772:intron | 15.0% |
| !!! | ATAAACTTTAAGAACTAAAT+CGG | + | chr8.3:9481049-9481068 | MS.gene58772:intron | 15.0% |
| !!! | CAAACTTTCATATAATTTTA+TGG | + | chr8.3:9481006-9481025 | MS.gene58772:intron | 15.0% |
| !!! | GTTTTTGGTTTTTTATTTTT+TGG | + | chr8.3:9480166-9480185 | MS.gene58772:intron | 15.0% |
| !! | TATCTATGAAAAAATCAGAT+GGG | - | chr8.3:9480903-9480922 | None:intergenic | 20.0% |
| !! | TTATCTATGAAAAAATCAGA+TGG | - | chr8.3:9480904-9480923 | None:intergenic | 20.0% |
| !!! | AACTTTTTGCTTATTGTTTT+TGG | + | chr8.3:9480151-9480170 | MS.gene58772:intron | 20.0% |
| !!! | ATCTGATTTTTTCATAGATA+AGG | + | chr8.3:9480903-9480922 | MS.gene58772:CDS | 20.0% |
| !!! | GTGATTTATTAATAGGTTTT+GGG | + | chr8.3:9481155-9481174 | MS.gene58772:intron | 20.0% |
| !!! | TGTGATTTATTAATAGGTTT+TGG | + | chr8.3:9481154-9481173 | MS.gene58772:intron | 20.0% |
| !!! | TTTATTTTTTGGACCTTATT+AGG | + | chr8.3:9480177-9480196 | MS.gene58772:intron | 20.0% |
| !!! | TTTTCTCATTAAAGTTCATT+TGG | + | chr8.3:9481257-9481276 | MS.gene58772:intron | 20.0% |
| ! | AAGATTACCATTCTTCTAAA+AGG | + | chr8.3:9480230-9480249 | MS.gene58772:CDS | 25.0% |
| ! | AGTTCAATGATGAATTCAAA+GGG | - | chr8.3:9480117-9480136 | None:intergenic | 25.0% |
| ! | ATCTATGAAAAAATCAGATG+GGG | - | chr8.3:9480902-9480921 | None:intergenic | 25.0% |
| ! | TAGTTCAATGATGAATTCAA+AGG | - | chr8.3:9480118-9480137 | None:intergenic | 25.0% |
| ! | TTATGAAACAAAGTCCTAAA+TGG | - | chr8.3:9480625-9480644 | None:intergenic | 25.0% |
| !! | AACATTGTACTCAACTTTTA+CGG | + | chr8.3:9481429-9481448 | MS.gene58772:intron | 25.0% |
| !! | ACTCACGAAAATTTAAGATT+TGG | - | chr8.3:9481236-9481255 | None:intergenic | 25.0% |
| !! | ATTTAGGACTTTGTTTCATA+AGG | + | chr8.3:9480624-9480643 | MS.gene58772:CDS | 25.0% |
| !! | CTCACGAAAATTTAAGATTT+GGG | - | chr8.3:9481235-9481254 | None:intergenic | 25.0% |
| !! | TTTTGGTCATCAAGATAATT+CGG | + | chr8.3:9481659-9481678 | MS.gene58772:CDS | 25.0% |
| AAATCAGTGAAAAAGCAATG+GGG | + | chr8.3:9480697-9480716 | MS.gene58772:CDS | 30.0% | |
| AAGCTTGTCTCTTATTATGA+TGG | - | chr8.3:9480063-9480082 | None:intergenic | 30.0% | |
| AAGGAGAATTTGAACTCTAA+GGG | + | chr8.3:9480394-9480413 | MS.gene58772:CDS | 30.0% | |
| AGCAATTTCTACAAGAATTC+CGG | + | chr8.3:9481350-9481369 | MS.gene58772:CDS | 30.0% | |
| AGCTTGTCTCTTATTATGAT+GGG | - | chr8.3:9480062-9480081 | None:intergenic | 30.0% | |
| CATGCTAGATTGAAACATAA+TGG | - | chr8.3:9480945-9480964 | None:intergenic | 30.0% | |
| CTATCAGATCTTTGATTCAA+AGG | - | chr8.3:9480784-9480803 | None:intergenic | 30.0% | |
| GAAATCAGTGAAAAAGCAAT+GGG | + | chr8.3:9480696-9480715 | MS.gene58772:CDS | 30.0% | |
| GAACTAAATCGGATAGTTTA+TGG | + | chr8.3:9481060-9481079 | MS.gene58772:intron | 30.0% | |
| GAATTGGAAGAGAAATGAAT+TGG | + | chr8.3:9480735-9480754 | MS.gene58772:CDS | 30.0% | |
| GCATAAAGTAGTTCCTAATA+AGG | - | chr8.3:9480193-9480212 | None:intergenic | 30.0% | |
| TGAAGGGAAAACTATTCTTA+TGG | + | chr8.3:9480540-9480559 | MS.gene58772:CDS | 30.0% | |
| TGATAAGAGTTTGATGAACA+AGG | + | chr8.3:9480375-9480394 | MS.gene58772:CDS | 30.0% | |
| TGCATAAACAACAAAGTGAA+GGG | + | chr8.3:9480524-9480543 | MS.gene58772:CDS | 30.0% | |
| TTCAATCCGACAACATTAAA+TGG | + | chr8.3:9479901-9479920 | MS.gene58772:CDS | 30.0% | |
| TTGCATAAACAACAAAGTGA+AGG | + | chr8.3:9480523-9480542 | MS.gene58772:CDS | 30.0% | |
| TTTGGGAAACAACATAAAGA+AGG | + | chr8.3:9481172-9481191 | MS.gene58772:CDS | 30.0% | |
| ! | AACGTTCATCCAAATCTTTT+TGG | + | chr8.3:9481642-9481661 | MS.gene58772:CDS | 30.0% |
| ! | AATCCAAAGTTGACTTACTT+AGG | - | chr8.3:9481405-9481424 | None:intergenic | 30.0% |
| ! | ATCCAAAGTTGACTTACTTA+GGG | - | chr8.3:9481404-9481423 | None:intergenic | 30.0% |
| ! | CTAGATTGAAACATAATGGA+AGG | - | chr8.3:9480941-9480960 | None:intergenic | 30.0% |
| ! | TCTTGATGACCAAAAAGATT+TGG | - | chr8.3:9481654-9481673 | None:intergenic | 30.0% |
| ! | TGTAAAAGAGAATTCTGAAG+AGG | + | chr8.3:9480327-9480346 | MS.gene58772:CDS | 30.0% |
| ! | TTGTTGCCATTTAATGTTGT+CGG | - | chr8.3:9479910-9479929 | None:intergenic | 30.0% |
| ! | TTTGAAGTTGAAAGGAAGAA+TGG | - | chr8.3:9479841-9479860 | None:intergenic | 30.0% |
| !! | TCACTTTGTTGTTTATGCAA+AGG | - | chr8.3:9480523-9480542 | None:intergenic | 30.0% |
| !! | TCAGCTTTGAAACAGATTAA+AGG | + | chr8.3:9480433-9480452 | MS.gene58772:CDS | 30.0% |
| !!! | GAACGTTTTTTGAAGTTGAA+AGG | - | chr8.3:9479849-9479868 | None:intergenic | 30.0% |
| AAGAAGAAGTTGCATTCTGA+TGG | + | chr8.3:9480874-9480893 | MS.gene58772:CDS | 35.0% | |
| AATCAGTGAAAAAGCAATGG+GGG | + | chr8.3:9480698-9480717 | MS.gene58772:CDS | 35.0% | |
| AATTTCTACAAGAATTCCGG+TGG | + | chr8.3:9481353-9481372 | MS.gene58772:CDS | 35.0% | |
| AGGGAAAACTATTCTTATGG+AGG | + | chr8.3:9480543-9480562 | MS.gene58772:CDS | 35.0% | |
| ATGAAGAGTTGAGTAGTAAG+TGG | - | chr8.3:9479793-9479812 | None:intergenic | 35.0% | |
| CAAAAACCACGTTGAAGAAA+TGG | + | chr8.3:9481542-9481561 | MS.gene58772:CDS | 35.0% | |
| CAACTTCTTCTTGATCAACT+TGG | - | chr8.3:9480866-9480885 | None:intergenic | 35.0% | |
| CAAGGAGAATTTGAACTCTA+AGG | + | chr8.3:9480393-9480412 | MS.gene58772:CDS | 35.0% | |
| GATCTTTGATTCAAAGGCAA+AGG | - | chr8.3:9480778-9480797 | None:intergenic | 35.0% | |
| GCTTGTCTCTTATTATGATG+GGG | - | chr8.3:9480061-9480080 | None:intergenic | 35.0% | |
| GGAAATCAGTGAAAAAGCAA+TGG | + | chr8.3:9480695-9480714 | MS.gene58772:CDS | 35.0% | |
| TCAAGAGAAAGACATTTGTC+CGG | + | chr8.3:9481582-9481601 | MS.gene58772:CDS | 35.0% | |
| TCTAAGGGAAAATCAAGTCA+TGG | + | chr8.3:9480409-9480428 | MS.gene58772:CDS | 35.0% | |
| TGAAGAGTTGAGTAGTAAGT+GGG | - | chr8.3:9479792-9479811 | None:intergenic | 35.0% | |
| TTCAAATCAGACTTATCCAC+CGG | - | chr8.3:9481372-9481391 | None:intergenic | 35.0% | |
| TTCCCTAAGTAAGTCAACTT+TGG | + | chr8.3:9481399-9481418 | MS.gene58772:intron | 35.0% | |
| TTCTTGATCAACTTGGTATC+TGG | - | chr8.3:9480859-9480878 | None:intergenic | 35.0% | |
| ! | AACATCAATCCATTTTCGCA+TGG | + | chr8.3:9481693-9481712 | MS.gene58772:CDS | 35.0% |
| ! | TGTTTTCCATTTCTTCAACG+TGG | - | chr8.3:9481551-9481570 | None:intergenic | 35.0% |
| ! | TTCTGGAGGAGAAGAAATAA+GGG | - | chr8.3:9480030-9480049 | None:intergenic | 35.0% |
| ! | TTTCATAAGGAGCATAGAGA+GGG | + | chr8.3:9480637-9480656 | MS.gene58772:CDS | 35.0% |
| !! | AAGAATGGTTTTGCAGAAAG+AGG | - | chr8.3:9479826-9479845 | None:intergenic | 35.0% |
| !! | CTTTGTTGTTTATGCAAAGG+AGG | - | chr8.3:9480520-9480539 | None:intergenic | 35.0% |
| !! | GGTTTGATGGATTGAAGAAT+TGG | + | chr8.3:9480719-9480738 | MS.gene58772:CDS | 35.0% |
| !!! | CACCAAGTTTTGAACTTGAT+GGG | + | chr8.3:9479939-9479958 | MS.gene58772:CDS | 35.0% |
| AAAAAGCAATGGGGGTTTGA+TGG | + | chr8.3:9480706-9480725 | MS.gene58772:CDS | 40.0% | |
| ACAGATTAAAGGAGCAGCTT+CGG | + | chr8.3:9480444-9480463 | MS.gene58772:CDS | 40.0% | |
| CCATCAAGTTCAAAACTTGG+TGG | - | chr8.3:9479941-9479960 | None:intergenic | 40.0% | |
| GACAATCTATGTTCTGCAGA+AGG | - | chr8.3:9479876-9479895 | None:intergenic | 40.0% | |
| GACCCATCAAGTTCAAAACT+TGG | - | chr8.3:9479944-9479963 | None:intergenic | 40.0% | |
| TCAGCATAACCATGCGAAAA+TGG | - | chr8.3:9481705-9481724 | None:intergenic | 40.0% | |
| TGCAAACAGCAATGATCAGA+TGG | + | chr8.3:9481326-9481345 | MS.gene58772:intron | 40.0% | |
| TTGTGTGTCTGATGTGTTGA+AGG | + | chr8.3:9481466-9481485 | MS.gene58772:intron | 40.0% | |
| ! | AAGAGAATTCTGAAGAGGAG+TGG | + | chr8.3:9480332-9480351 | MS.gene58772:CDS | 40.0% |
| ! | ATGGTTATGCTGAGAGTACA+TGG | + | chr8.3:9481712-9481731 | MS.gene58772:CDS | 40.0% |
| ! | CCATTCTTCTAAAAGGCCAT+TGG | + | chr8.3:9480237-9480256 | MS.gene58772:CDS | 40.0% |
| ! | GAATCAAAGATCTGATAGCG+AGG | + | chr8.3:9480786-9480805 | MS.gene58772:CDS | 40.0% |
| ! | GTTTCATAAGGAGCATAGAG+AGG | + | chr8.3:9480636-9480655 | MS.gene58772:CDS | 40.0% |
| ! | TTGATGGGTCTTCACAAAGA+AGG | + | chr8.3:9479954-9479973 | MS.gene58772:CDS | 40.0% |
| !! | CCAATGGCCTTTTAGAAGAA+TGG | - | chr8.3:9480240-9480259 | None:intergenic | 40.0% |
| !! | GTGGTCTGTGATTGATTTGA+AGG | + | chr8.3:9480351-9480370 | MS.gene58772:CDS | 40.0% |
| !! | GTTCTGGAGGAGAAGAAATA+AGG | - | chr8.3:9480031-9480050 | None:intergenic | 40.0% |
| !! | TGATCATTGCTGTTTGCACA+CGG | - | chr8.3:9481324-9481343 | None:intergenic | 40.0% |
| !!! | AGACAAGCTTCTGTTTTTGC+AGG | + | chr8.3:9480073-9480092 | MS.gene58772:CDS | 40.0% |
| !!! | CCACCAAGTTTTGAACTTGA+TGG | + | chr8.3:9479938-9479957 | MS.gene58772:CDS | 40.0% |
| ACTGCTAACCTTTGCACCAA+TGG | - | chr8.3:9480256-9480275 | None:intergenic | 45.0% | |
| AGGTCATGGTGTGACAAGTA+TGG | + | chr8.3:9481486-9481505 | MS.gene58772:intron | 45.0% | |
| ATGCTAGAGATGTGATCGCA+GGG | + | chr8.3:9480293-9480312 | MS.gene58772:CDS | 45.0% | |
| CGTCGAAGAGGAAACCATTT+AGG | + | chr8.3:9480608-9480627 | MS.gene58772:CDS | 45.0% | |
| CTAAAAGGCCATTGGTGCAA+AGG | + | chr8.3:9480245-9480264 | MS.gene58772:CDS | 45.0% | |
| CTGAGGTAGAACAAAGAGGA+GGG | + | chr8.3:9480674-9480693 | MS.gene58772:CDS | 45.0% | |
| GTAGTAAGTGGGTGTGTAGT+TGG | - | chr8.3:9479781-9479800 | None:intergenic | 45.0% | |
| GTCTGATGTGTTGAAGGTCA+TGG | + | chr8.3:9481472-9481491 | MS.gene58772:intron | 45.0% | |
| GTGCAAAGGTTAGCAGTACA+AGG | + | chr8.3:9480259-9480278 | MS.gene58772:CDS | 45.0% | |
| TGTGCTGGATGTGGTGAAAA+AGG | + | chr8.3:9481515-9481534 | MS.gene58772:CDS | 45.0% | |
| ! | AAAGGAGCAGCTTCGGTTTT+CGG | + | chr8.3:9480451-9480470 | MS.gene58772:CDS | 45.0% |
| ! | AAGGAGCATAGAGAGGGAAA+TGG | + | chr8.3:9480643-9480662 | MS.gene58772:CDS | 45.0% |
| ! | ATGATGGGGTGTTCTTGTTC+TGG | - | chr8.3:9480047-9480066 | None:intergenic | 45.0% |
| ! | CAAGTATGGTGATGTTGTGC+TGG | + | chr8.3:9481500-9481519 | MS.gene58772:CDS | 45.0% |
| ! | CAGTCTTTTGCAAGAGCAGT+TGG | + | chr8.3:9480826-9480845 | MS.gene58772:CDS | 45.0% |
| ! | TCTGAGGTAGAACAAAGAGG+AGG | + | chr8.3:9480673-9480692 | MS.gene58772:CDS | 45.0% |
| ! | TTGTGCTGCTAAGTTCTGTC+TGG | - | chr8.3:9481211-9481230 | None:intergenic | 45.0% |
| !! | CTCGCGCTTTGAGCTAATTT+TGG | + | chr8.3:9481108-9481127 | MS.gene58772:intron | 45.0% |
| !! | TTGCAAGAGCAGTTGGTGAT+GGG | + | chr8.3:9480833-9480852 | MS.gene58772:CDS | 45.0% |
| !! | TTTGCAAGAGCAGTTGGTGA+TGG | + | chr8.3:9480832-9480851 | MS.gene58772:CDS | 45.0% |
| AAACCAGCAAAGGAAAGCGG+TGG | + | chr8.3:9480580-9480599 | MS.gene58772:CDS | 50.0% | |
| ATAGAGAGGGAAATGGCGGT+GGG | + | chr8.3:9480650-9480669 | MS.gene58772:CDS | 50.0% | |
| CCGAAACCAGCAAAGGAAAG+CGG | + | chr8.3:9480577-9480596 | MS.gene58772:CDS | 50.0% | |
| GAGCATAGAGAGGGAAATGG+CGG | + | chr8.3:9480646-9480665 | MS.gene58772:CDS | 50.0% | |
| GATGCTAGAGATGTGATCGC+AGG | + | chr8.3:9480292-9480311 | MS.gene58772:CDS | 50.0% | |
| ! | AAGGAGCAGCTTCGGTTTTC+GGG | + | chr8.3:9480452-9480471 | MS.gene58772:CDS | 50.0% |
| ! | ATGGGGTGTTCTTGTTCTGG+AGG | - | chr8.3:9480044-9480063 | None:intergenic | 50.0% |
| ! | GGGTCTGAGGTAGAACAAAG+AGG | + | chr8.3:9480670-9480689 | MS.gene58772:CDS | 50.0% |
| ! | TGGTGATGTTGTGCTGGATG+TGG | + | chr8.3:9481506-9481525 | MS.gene58772:CDS | 50.0% |
| !! | CCGCTTTCCTTTGCTGGTTT+CGG | - | chr8.3:9480580-9480599 | None:intergenic | 50.0% |
| !! | CTTTCCTTTGCTGGTTTCGG+AGG | - | chr8.3:9480577-9480596 | None:intergenic | 50.0% |
| !! | TGTCCAACGCTTTGAGTTGC+CGG | - | chr8.3:9481604-9481623 | None:intergenic | 50.0% |
| CATAGAGAGGGAAATGGCGG+TGG | + | chr8.3:9480649-9480668 | MS.gene58772:CDS | 55.0% | |
| TGAGCCTCCGAAACCAGCAA+AGG | + | chr8.3:9480570-9480589 | MS.gene58772:CDS | 55.0% | |
| TGTCCGGCAACTCAAAGCGT+TGG | + | chr8.3:9481598-9481617 | MS.gene58772:CDS | 55.0% | |
| CCACCACCGCTTTCCTTTGC+TGG | - | chr8.3:9480586-9480605 | None:intergenic | 60.0% | |
| CCAGCAAAGGAAAGCGGTGG+TGG | + | chr8.3:9480583-9480602 | MS.gene58772:CDS | 60.0% | |
| GGGAAATGGCGGTGGGTCTG+AGG | + | chr8.3:9480657-9480676 | MS.gene58772:CDS | 65.0% | |
| ! | GCGGTGGTGGTTCGTCGAAG+AGG | + | chr8.3:9480596-9480615 | MS.gene58772:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 9479768 | 9481740 | 9479768 | ID=MS.gene58772 |
| chr8.3 | mRNA | 9479768 | 9481740 | 9479768 | ID=MS.gene58772.t1;Parent=MS.gene58772 |
| chr8.3 | exon | 9479768 | 9480094 | 9479768 | ID=MS.gene58772.t1.exon1;Parent=MS.gene58772.t1 |
| chr8.3 | CDS | 9479768 | 9480094 | 9479768 | ID=cds.MS.gene58772.t1;Parent=MS.gene58772.t1 |
| chr8.3 | exon | 9480199 | 9480924 | 9480199 | ID=MS.gene58772.t1.exon2;Parent=MS.gene58772.t1 |
| chr8.3 | CDS | 9480199 | 9480924 | 9480199 | ID=cds.MS.gene58772.t1;Parent=MS.gene58772.t1 |
| chr8.3 | exon | 9481170 | 9481249 | 9481170 | ID=MS.gene58772.t1.exon3;Parent=MS.gene58772.t1 |
| chr8.3 | CDS | 9481170 | 9481249 | 9481170 | ID=cds.MS.gene58772.t1;Parent=MS.gene58772.t1 |
| chr8.3 | exon | 9481335 | 9481406 | 9481335 | ID=MS.gene58772.t1.exon4;Parent=MS.gene58772.t1 |
| chr8.3 | CDS | 9481335 | 9481406 | 9481335 | ID=cds.MS.gene58772.t1;Parent=MS.gene58772.t1 |
| chr8.3 | exon | 9481488 | 9481740 | 9481488 | ID=MS.gene58772.t1.exon5;Parent=MS.gene58772.t1 |
| chr8.3 | CDS | 9481488 | 9481740 | 9481488 | ID=cds.MS.gene58772.t1;Parent=MS.gene58772.t1 |
| Gene Sequence |
| Protein sequence |
