Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61326.t1 | XP_003620632.1 | 99.5 | 209 | 1 | 0 | 1 | 209 | 1 | 209 | 2.20E-115 | 424.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61326.t1 | O82480 | 91.4 | 210 | 15 | 2 | 1 | 209 | 1 | 208 | 9.5e-107 | 387.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61326.t1 | A7UQU4 | 99.5 | 209 | 1 | 0 | 1 | 209 | 1 | 209 | 1.6e-115 | 424.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051914 | MS.gene61326 | 0.81403 | 1.90E-51 | -1.69E-46 |
| MS.gene052308 | MS.gene61326 | 0.854792 | 9.72E-62 | -1.69E-46 |
| MS.gene053173 | MS.gene61326 | 0.828692 | 7.80E-55 | -1.69E-46 |
| MS.gene054551 | MS.gene61326 | 0.831736 | 1.41E-55 | -1.69E-46 |
| MS.gene054593 | MS.gene61326 | 0.806725 | 7.16E-50 | -1.69E-46 |
| MS.gene055308 | MS.gene61326 | 0.813667 | 2.28E-51 | -1.69E-46 |
| MS.gene055578 | MS.gene61326 | 0.840362 | 9.10E-58 | -1.69E-46 |
| MS.gene056041 | MS.gene61326 | 0.830524 | 2.80E-55 | -1.69E-46 |
| MS.gene05640 | MS.gene61326 | 0.803186 | 3.93E-49 | -1.69E-46 |
| MS.gene05652 | MS.gene61326 | 0.810248 | 1.27E-50 | -1.69E-46 |
| MS.gene057458 | MS.gene61326 | 0.80527 | 1.45E-49 | -1.69E-46 |
| MS.gene058128 | MS.gene61326 | 0.817948 | 2.53E-52 | -1.69E-46 |
| MS.gene058853 | MS.gene61326 | 0.825084 | 5.69E-54 | -1.69E-46 |
| MS.gene059616 | MS.gene61326 | 0.808059 | 3.73E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene47563 | MS.gene61326 | PPI |
| MS.gene017610 | MS.gene61326 | PPI |
| MS.gene61326 | MS.gene59498 | PPI |
| MS.gene44220 | MS.gene61326 | PPI |
| MS.gene26862 | MS.gene61326 | PPI |
| MS.gene59498 | MS.gene61326 | PPI |
| MS.gene67475 | MS.gene61326 | PPI |
| MS.gene64799 | MS.gene61326 | PPI |
| MS.gene67474 | MS.gene61326 | PPI |
| MS.gene074376 | MS.gene61326 | PPI |
| MS.gene61326 | MS.gene017610 | PPI |
| MS.gene39545 | MS.gene61326 | PPI |
| MS.gene28870 | MS.gene61326 | PPI |
| MS.gene67709 | MS.gene61326 | PPI |
| MS.gene012136 | MS.gene61326 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61326.t1 | MTR_6g087980 | 99.522 | 209 | 1 | 0 | 1 | 209 | 1 | 209 | 5.22e-157 | 432 |
| MS.gene61326.t1 | MTR_3g078260 | 76.471 | 204 | 45 | 2 | 2 | 205 | 4 | 204 | 3.93e-117 | 332 |
| MS.gene61326.t1 | MTR_4g073250 | 75.000 | 200 | 47 | 1 | 1 | 200 | 1 | 197 | 2.65e-113 | 322 |
| MS.gene61326.t1 | MTR_2g090875 | 81.461 | 178 | 33 | 0 | 1 | 178 | 1 | 178 | 1.20e-109 | 312 |
| MS.gene61326.t1 | MTR_8g075240 | 79.775 | 178 | 36 | 0 | 1 | 178 | 1 | 178 | 2.21e-106 | 304 |
| MS.gene61326.t1 | MTR_4g088055 | 78.652 | 178 | 38 | 0 | 1 | 178 | 1 | 178 | 6.81e-106 | 303 |
| MS.gene61326.t1 | MTR_5g022600 | 79.213 | 178 | 37 | 0 | 1 | 178 | 1 | 178 | 9.25e-105 | 300 |
| MS.gene61326.t1 | MTR_3g078260 | 87.395 | 119 | 15 | 0 | 2 | 120 | 4 | 122 | 2.67e-76 | 226 |
| MS.gene61326.t1 | MTR_3g096350 | 32.584 | 178 | 105 | 5 | 7 | 181 | 13 | 178 | 4.85e-27 | 102 |
| MS.gene61326.t1 | MTR_7g103070 | 32.967 | 182 | 107 | 5 | 8 | 185 | 18 | 188 | 6.05e-26 | 100 |
| MS.gene61326.t1 | MTR_8g093740 | 32.402 | 179 | 106 | 5 | 6 | 181 | 13 | 179 | 3.41e-25 | 97.8 |
| MS.gene61326.t1 | MTR_6g021790 | 32.597 | 181 | 108 | 5 | 1 | 179 | 1 | 169 | 3.81e-25 | 97.8 |
| MS.gene61326.t1 | MTR_2g027660 | 32.558 | 172 | 102 | 5 | 1 | 170 | 1 | 160 | 4.05e-24 | 95.1 |
| MS.gene61326.t1 | MTR_1g115325 | 31.737 | 167 | 101 | 5 | 6 | 170 | 15 | 170 | 1.03e-23 | 94.4 |
| MS.gene61326.t1 | MTR_1g068740 | 31.737 | 167 | 101 | 5 | 6 | 170 | 15 | 170 | 1.56e-23 | 94.0 |
| MS.gene61326.t1 | MTR_1g094220 | 32.203 | 177 | 105 | 6 | 7 | 180 | 32 | 196 | 2.28e-23 | 92.8 |
| MS.gene61326.t1 | MTR_1g068730 | 31.737 | 167 | 101 | 5 | 6 | 170 | 15 | 170 | 2.42e-23 | 93.2 |
| MS.gene61326.t1 | MTR_8g006970 | 32.335 | 167 | 99 | 5 | 6 | 170 | 8 | 162 | 4.77e-23 | 91.7 |
| MS.gene61326.t1 | MTR_8g006970 | 31.220 | 205 | 116 | 8 | 6 | 197 | 22 | 214 | 7.33e-23 | 92.0 |
| MS.gene61326.t1 | MTR_7g100020 | 31.138 | 167 | 102 | 5 | 6 | 170 | 15 | 170 | 9.64e-23 | 91.7 |
| MS.gene61326.t1 | MTR_1g029450 | 30.726 | 179 | 109 | 5 | 6 | 181 | 17 | 183 | 9.95e-23 | 91.7 |
| MS.gene61326.t1 | MTR_1g094220 | 32.164 | 171 | 101 | 6 | 7 | 174 | 32 | 190 | 1.16e-22 | 91.3 |
| MS.gene61326.t1 | MTR_1g094220 | 32.164 | 171 | 101 | 6 | 7 | 174 | 32 | 190 | 1.40e-22 | 90.9 |
| MS.gene61326.t1 | MTR_2g101890 | 31.250 | 208 | 119 | 7 | 6 | 198 | 10 | 208 | 4.30e-22 | 89.7 |
| MS.gene61326.t1 | MTR_1g094220 | 32.353 | 170 | 100 | 6 | 7 | 173 | 32 | 189 | 4.59e-22 | 90.5 |
| MS.gene61326.t1 | MTR_8g103550 | 32.222 | 180 | 107 | 6 | 8 | 184 | 11 | 178 | 6.79e-22 | 89.0 |
| MS.gene61326.t1 | MTR_1g090717 | 30.244 | 205 | 117 | 8 | 8 | 197 | 17 | 210 | 8.00e-22 | 89.4 |
| MS.gene61326.t1 | MTR_1g062760 | 31.319 | 182 | 109 | 6 | 8 | 185 | 16 | 185 | 8.53e-22 | 89.0 |
| MS.gene61326.t1 | MTR_1g097420 | 29.327 | 208 | 123 | 6 | 6 | 198 | 8 | 206 | 1.34e-21 | 88.6 |
| MS.gene61326.t1 | MTR_4g063160 | 31.953 | 169 | 100 | 6 | 6 | 170 | 15 | 172 | 1.38e-21 | 88.6 |
| MS.gene61326.t1 | MTR_7g081700 | 31.138 | 167 | 101 | 5 | 6 | 170 | 8 | 162 | 1.62e-21 | 88.2 |
| MS.gene61326.t1 | MTR_8g031660 | 31.395 | 172 | 104 | 5 | 1 | 170 | 1 | 160 | 1.92e-21 | 88.2 |
| MS.gene61326.t1 | MTR_4g098950 | 33.939 | 165 | 95 | 5 | 8 | 170 | 11 | 163 | 3.45e-21 | 87.4 |
| MS.gene61326.t1 | MTR_8g031870 | 29.651 | 172 | 107 | 5 | 1 | 170 | 1 | 160 | 3.72e-21 | 87.0 |
| MS.gene61326.t1 | MTR_3g069510 | 31.551 | 187 | 114 | 5 | 6 | 190 | 12 | 186 | 5.64e-21 | 87.0 |
| MS.gene61326.t1 | MTR_8g090215 | 35.152 | 165 | 93 | 5 | 8 | 170 | 11 | 163 | 6.91e-21 | 86.7 |
| MS.gene61326.t1 | MTR_8g031830 | 30.409 | 171 | 105 | 5 | 1 | 169 | 1 | 159 | 7.13e-21 | 86.3 |
| MS.gene61326.t1 | MTR_4g012940 | 30.769 | 208 | 120 | 7 | 6 | 198 | 8 | 206 | 1.14e-20 | 85.9 |
| MS.gene61326.t1 | MTR_8g031680 | 29.651 | 172 | 107 | 5 | 1 | 170 | 1 | 160 | 1.76e-20 | 85.5 |
| MS.gene61326.t1 | MTR_4g069850 | 29.612 | 206 | 122 | 5 | 6 | 197 | 8 | 204 | 2.65e-20 | 85.1 |
| MS.gene61326.t1 | MTR_4g064897 | 29.293 | 198 | 123 | 6 | 6 | 201 | 12 | 194 | 3.76e-20 | 84.7 |
| MS.gene61326.t1 | MTR_5g013900 | 33.939 | 165 | 95 | 5 | 8 | 170 | 11 | 163 | 4.20e-20 | 84.7 |
| MS.gene61326.t1 | MTR_2g005500 | 28.814 | 177 | 109 | 6 | 1 | 172 | 1 | 165 | 4.98e-20 | 84.3 |
| MS.gene61326.t1 | MTR_2g096550 | 28.947 | 190 | 120 | 6 | 6 | 191 | 15 | 193 | 5.32e-20 | 84.3 |
| MS.gene61326.t1 | MTR_3g087160 | 34.545 | 165 | 94 | 5 | 8 | 170 | 11 | 163 | 5.47e-20 | 84.3 |
| MS.gene61326.t1 | MTR_2g083860 | 36.364 | 121 | 74 | 3 | 6 | 124 | 13 | 132 | 7.01e-20 | 84.3 |
| MS.gene61326.t1 | MTR_8g089985 | 29.412 | 187 | 118 | 5 | 8 | 192 | 19 | 193 | 7.84e-20 | 84.3 |
| MS.gene61326.t1 | MTR_4g079350 | 37.500 | 128 | 77 | 3 | 6 | 131 | 13 | 139 | 8.74e-20 | 84.0 |
| MS.gene61326.t1 | MTR_8g027220 | 38.971 | 136 | 73 | 5 | 8 | 134 | 28 | 162 | 1.34e-19 | 84.0 |
| MS.gene61326.t1 | MTR_3g086980 | 28.877 | 187 | 119 | 5 | 8 | 192 | 18 | 192 | 1.54e-19 | 83.6 |
| MS.gene61326.t1 | MTR_2g005510 | 30.435 | 184 | 114 | 5 | 6 | 187 | 15 | 186 | 2.71e-19 | 82.8 |
| MS.gene61326.t1 | MTR_4g088090 | 36.290 | 124 | 76 | 3 | 6 | 127 | 13 | 135 | 2.90e-19 | 82.4 |
| MS.gene61326.t1 | MTR_8g036220 | 30.526 | 190 | 118 | 5 | 6 | 193 | 16 | 193 | 2.94e-19 | 82.8 |
| MS.gene61326.t1 | MTR_1g068740 | 33.077 | 130 | 84 | 3 | 6 | 133 | 15 | 143 | 2.97e-19 | 82.0 |
| MS.gene61326.t1 | MTR_1g068730 | 34.146 | 123 | 78 | 3 | 6 | 126 | 15 | 136 | 3.11e-19 | 81.3 |
| MS.gene61326.t1 | MTR_2g075950 | 36.364 | 121 | 74 | 3 | 6 | 124 | 13 | 132 | 3.69e-19 | 82.4 |
| MS.gene61326.t1 | MTR_2g014990 | 30.270 | 185 | 113 | 6 | 6 | 187 | 13 | 184 | 4.79e-19 | 82.0 |
| MS.gene61326.t1 | MTR_7g117910 | 37.302 | 126 | 76 | 3 | 8 | 131 | 22 | 146 | 5.89e-19 | 81.6 |
| MS.gene61326.t1 | MTR_3g064390 | 31.138 | 167 | 97 | 5 | 8 | 170 | 12 | 164 | 1.23e-18 | 80.5 |
| MS.gene61326.t1 | MTR_5g076590 | 30.539 | 167 | 98 | 5 | 8 | 170 | 12 | 164 | 1.75e-18 | 80.1 |
| MS.gene61326.t1 | MTR_1g052475 | 37.607 | 117 | 70 | 3 | 8 | 122 | 17 | 132 | 3.33e-18 | 79.7 |
| MS.gene61326.t1 | MTR_8g092020 | 28.986 | 207 | 123 | 6 | 6 | 198 | 12 | 208 | 4.24e-18 | 79.3 |
| MS.gene61326.t1 | MTR_8g093740 | 32.117 | 137 | 80 | 3 | 47 | 181 | 21 | 146 | 4.47e-18 | 78.6 |
| MS.gene61326.t1 | MTR_1g097420 | 29.442 | 197 | 115 | 6 | 17 | 198 | 46 | 233 | 5.55e-18 | 79.3 |
| MS.gene61326.t1 | MTR_3g096350 | 33.898 | 118 | 74 | 3 | 7 | 121 | 13 | 129 | 7.84e-18 | 77.4 |
| MS.gene61326.t1 | MTR_3g096350 | 33.898 | 118 | 74 | 3 | 7 | 121 | 13 | 129 | 8.49e-18 | 77.0 |
| MS.gene61326.t1 | MTR_2g102060 | 29.697 | 165 | 102 | 5 | 8 | 170 | 12 | 164 | 1.03e-17 | 78.2 |
| MS.gene61326.t1 | MTR_8g107070 | 30.108 | 186 | 116 | 5 | 6 | 189 | 14 | 187 | 1.14e-17 | 79.3 |
| MS.gene61326.t1 | MTR_0262s0050 | 37.607 | 117 | 70 | 3 | 8 | 122 | 17 | 132 | 1.27e-17 | 78.2 |
| MS.gene61326.t1 | MTR_7g051940 | 29.834 | 181 | 113 | 5 | 6 | 184 | 13 | 181 | 1.66e-17 | 77.8 |
| MS.gene61326.t1 | MTR_1g078200 | 28.421 | 190 | 122 | 5 | 6 | 193 | 14 | 191 | 3.14e-17 | 77.4 |
| MS.gene61326.t1 | MTR_3g064390 | 34.959 | 123 | 73 | 4 | 8 | 126 | 12 | 131 | 3.61e-17 | 75.5 |
| MS.gene61326.t1 | MTR_6g079550 | 27.979 | 193 | 125 | 5 | 6 | 196 | 12 | 192 | 9.15e-17 | 75.9 |
| MS.gene61326.t1 | MTR_7g103070 | 31.387 | 137 | 81 | 3 | 47 | 181 | 2 | 127 | 9.39e-17 | 74.3 |
| MS.gene61326.t1 | MTR_7g405790 | 27.586 | 203 | 133 | 5 | 6 | 206 | 15 | 205 | 9.41e-17 | 75.9 |
| MS.gene61326.t1 | MTR_2g090865 | 35.537 | 121 | 75 | 3 | 6 | 124 | 11 | 130 | 3.41e-15 | 71.6 |
| MS.gene61326.t1 | MTR_4g099470 | 32.609 | 138 | 79 | 5 | 35 | 170 | 13 | 138 | 4.65e-15 | 70.5 |
| MS.gene61326.t1 | MTR_3g107717 | 33.051 | 118 | 77 | 2 | 7 | 123 | 14 | 130 | 6.32e-14 | 68.2 |
| MS.gene61326.t1 | MTR_3g107713 | 33.051 | 118 | 77 | 2 | 7 | 123 | 14 | 130 | 6.52e-14 | 68.2 |
| MS.gene61326.t1 | MTR_3g107707 | 33.051 | 118 | 77 | 2 | 7 | 123 | 14 | 130 | 6.86e-14 | 68.2 |
| MS.gene61326.t1 | MTR_6g039490 | 24.757 | 206 | 133 | 5 | 6 | 198 | 8 | 204 | 1.04e-13 | 67.8 |
| MS.gene61326.t1 | MTR_1g072280 | 27.684 | 177 | 118 | 4 | 5 | 180 | 11 | 178 | 4.55e-12 | 64.7 |
| MS.gene61326.t1 | MTR_7g094810 | 26.738 | 187 | 103 | 3 | 7 | 180 | 9 | 174 | 8.91e-12 | 63.9 |
| MS.gene61326.t1 | MTR_7g094810 | 26.738 | 187 | 103 | 3 | 7 | 180 | 9 | 174 | 9.15e-12 | 63.9 |
| MS.gene61326.t1 | MTR_7g094810 | 26.738 | 187 | 103 | 3 | 7 | 180 | 9 | 174 | 9.25e-12 | 63.5 |
| MS.gene61326.t1 | MTR_7g094810 | 26.738 | 187 | 103 | 3 | 7 | 180 | 9 | 174 | 1.06e-11 | 63.5 |
| MS.gene61326.t1 | MTR_7g094810 | 26.738 | 187 | 103 | 3 | 7 | 180 | 9 | 174 | 1.07e-11 | 63.5 |
| MS.gene61326.t1 | MTR_1g082870 | 27.011 | 174 | 119 | 3 | 7 | 180 | 17 | 182 | 7.33e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61326.t1 | AT4G28950 | 91.429 | 210 | 15 | 2 | 1 | 209 | 1 | 208 | 2.30e-142 | 395 |
| MS.gene61326.t1 | AT3G48040 | 77.451 | 204 | 45 | 1 | 2 | 205 | 4 | 206 | 2.41e-114 | 325 |
| MS.gene61326.t1 | AT5G62880 | 82.682 | 179 | 31 | 0 | 2 | 180 | 4 | 182 | 1.01e-111 | 318 |
| MS.gene61326.t1 | AT4G35020 | 79.558 | 181 | 37 | 0 | 1 | 181 | 1 | 181 | 1.36e-109 | 312 |
| MS.gene61326.t1 | AT4G35020 | 79.558 | 181 | 37 | 0 | 1 | 181 | 1 | 181 | 1.36e-109 | 312 |
| MS.gene61326.t1 | AT4G35020 | 79.558 | 181 | 37 | 0 | 1 | 181 | 1 | 181 | 1.36e-109 | 312 |
| MS.gene61326.t1 | AT3G51300 | 80.337 | 178 | 35 | 0 | 1 | 178 | 1 | 178 | 1.11e-107 | 307 |
| MS.gene61326.t1 | AT1G75840 | 80.337 | 178 | 35 | 0 | 1 | 178 | 1 | 178 | 1.62e-106 | 304 |
| MS.gene61326.t1 | AT5G45970 | 78.212 | 179 | 39 | 0 | 1 | 179 | 1 | 179 | 2.00e-106 | 304 |
| MS.gene61326.t1 | AT1G20090 | 80.114 | 176 | 35 | 0 | 3 | 178 | 2 | 177 | 8.03e-106 | 303 |
| MS.gene61326.t1 | AT2G17800 | 79.213 | 178 | 37 | 0 | 1 | 178 | 1 | 178 | 1.24e-105 | 302 |
| MS.gene61326.t1 | AT2G17800 | 79.213 | 178 | 37 | 0 | 1 | 178 | 1 | 178 | 1.24e-105 | 302 |
| MS.gene61326.t1 | AT4G35950 | 78.090 | 178 | 39 | 0 | 1 | 178 | 1 | 178 | 2.28e-104 | 299 |
| MS.gene61326.t1 | AT5G62880 | 82.036 | 167 | 30 | 0 | 2 | 168 | 4 | 170 | 9.77e-103 | 295 |
| MS.gene61326.t1 | AT3G48040 | 83.436 | 163 | 27 | 0 | 2 | 164 | 4 | 166 | 2.49e-102 | 293 |
| MS.gene61326.t1 | AT2G44690 | 70.256 | 195 | 54 | 1 | 6 | 200 | 18 | 208 | 8.08e-99 | 285 |
| MS.gene61326.t1 | AT3G51290 | 79.310 | 145 | 30 | 0 | 34 | 178 | 635 | 779 | 5.85e-79 | 251 |
| MS.gene61326.t1 | AT4G35020 | 83.333 | 120 | 20 | 0 | 1 | 120 | 1 | 120 | 8.82e-74 | 220 |
| MS.gene61326.t1 | AT4G35020 | 83.333 | 120 | 20 | 0 | 1 | 120 | 1 | 120 | 8.82e-74 | 220 |
| MS.gene61326.t1 | AT4G35860 | 33.889 | 180 | 104 | 6 | 1 | 177 | 1 | 168 | 1.19e-26 | 102 |
| MS.gene61326.t1 | AT3G54840 | 33.898 | 177 | 102 | 6 | 7 | 180 | 34 | 198 | 2.57e-24 | 95.5 |
| MS.gene61326.t1 | AT4G17170 | 32.558 | 172 | 102 | 5 | 1 | 170 | 1 | 160 | 2.58e-24 | 95.9 |
| MS.gene61326.t1 | AT3G54840 | 34.524 | 168 | 95 | 6 | 7 | 171 | 34 | 189 | 3.82e-24 | 94.7 |
| MS.gene61326.t1 | AT3G54840 | 33.714 | 175 | 101 | 6 | 9 | 180 | 2 | 164 | 1.37e-23 | 92.8 |
| MS.gene61326.t1 | AT5G03530 | 30.097 | 206 | 116 | 8 | 8 | 197 | 15 | 208 | 1.71e-23 | 93.6 |
| MS.gene61326.t1 | AT5G03530 | 30.097 | 206 | 116 | 8 | 8 | 197 | 15 | 208 | 1.71e-23 | 93.6 |
| MS.gene61326.t1 | AT3G46060 | 31.737 | 167 | 101 | 5 | 6 | 170 | 15 | 170 | 1.95e-23 | 93.6 |
| MS.gene61326.t1 | AT3G46060 | 31.737 | 167 | 101 | 5 | 6 | 170 | 15 | 170 | 1.95e-23 | 93.6 |
| MS.gene61326.t1 | AT3G46060 | 31.737 | 167 | 101 | 5 | 6 | 170 | 15 | 170 | 1.95e-23 | 93.6 |
| MS.gene61326.t1 | AT5G45130 | 34.731 | 167 | 91 | 5 | 8 | 170 | 12 | 164 | 3.55e-23 | 92.4 |
| MS.gene61326.t1 | AT4G39890 | 35.542 | 166 | 92 | 5 | 8 | 170 | 11 | 164 | 3.79e-23 | 92.8 |
| MS.gene61326.t1 | AT5G59840 | 30.682 | 176 | 109 | 5 | 6 | 179 | 15 | 179 | 6.09e-23 | 92.4 |
| MS.gene61326.t1 | AT4G17160 | 30.814 | 172 | 105 | 5 | 1 | 170 | 1 | 160 | 1.14e-22 | 91.3 |
| MS.gene61326.t1 | AT1G73640 | 35.928 | 167 | 93 | 5 | 6 | 170 | 13 | 167 | 2.32e-22 | 91.3 |
| MS.gene61326.t1 | AT3G53610 | 30.114 | 176 | 110 | 5 | 6 | 179 | 15 | 179 | 2.47e-22 | 90.9 |
| MS.gene61326.t1 | AT3G53610 | 30.114 | 176 | 110 | 5 | 6 | 179 | 15 | 179 | 2.47e-22 | 90.9 |
| MS.gene61326.t1 | AT3G53610 | 30.114 | 176 | 110 | 5 | 6 | 179 | 15 | 179 | 2.47e-22 | 90.9 |
| MS.gene61326.t1 | AT1G02130 | 32.335 | 167 | 99 | 5 | 6 | 170 | 8 | 162 | 2.49e-22 | 90.5 |
| MS.gene61326.t1 | AT5G45130 | 34.545 | 165 | 90 | 5 | 10 | 170 | 22 | 172 | 3.25e-22 | 90.1 |
| MS.gene61326.t1 | AT1G22740 | 30.392 | 204 | 122 | 6 | 6 | 198 | 8 | 202 | 4.13e-22 | 89.7 |
| MS.gene61326.t1 | AT1G43890 | 29.050 | 179 | 112 | 5 | 6 | 181 | 13 | 179 | 4.19e-22 | 90.1 |
| MS.gene61326.t1 | AT1G43890 | 29.050 | 179 | 112 | 5 | 6 | 181 | 13 | 179 | 4.19e-22 | 90.1 |
| MS.gene61326.t1 | AT1G43890 | 29.050 | 179 | 112 | 5 | 6 | 181 | 13 | 179 | 4.19e-22 | 90.1 |
| MS.gene61326.t1 | AT3G18820 | 30.583 | 206 | 120 | 6 | 6 | 197 | 8 | 204 | 6.04e-22 | 89.4 |
| MS.gene61326.t1 | AT4G19640 | 33.533 | 167 | 93 | 5 | 8 | 170 | 12 | 164 | 9.78e-22 | 88.6 |
| MS.gene61326.t1 | AT4G17530 | 29.902 | 204 | 119 | 8 | 6 | 197 | 8 | 199 | 1.61e-21 | 88.2 |
| MS.gene61326.t1 | AT1G16920 | 38.843 | 121 | 71 | 3 | 6 | 124 | 13 | 132 | 2.37e-21 | 88.2 |
| MS.gene61326.t1 | AT5G47200 | 29.902 | 204 | 119 | 8 | 6 | 197 | 8 | 199 | 2.45e-21 | 87.8 |
| MS.gene61326.t1 | AT1G07410 | 31.551 | 187 | 114 | 6 | 6 | 190 | 12 | 186 | 2.66e-21 | 87.8 |
| MS.gene61326.t1 | AT1G18200 | 33.333 | 171 | 100 | 5 | 6 | 174 | 13 | 171 | 5.51e-21 | 87.4 |
| MS.gene61326.t1 | AT3G11730 | 30.178 | 169 | 104 | 5 | 6 | 172 | 8 | 164 | 7.40e-21 | 86.7 |
| MS.gene61326.t1 | AT5G59150 | 33.149 | 181 | 107 | 6 | 6 | 184 | 12 | 180 | 1.12e-20 | 86.3 |
| MS.gene61326.t1 | AT3G16100 | 31.401 | 207 | 119 | 7 | 6 | 198 | 8 | 205 | 1.22e-20 | 85.9 |
| MS.gene61326.t1 | AT2G22290 | 35.152 | 165 | 93 | 5 | 8 | 170 | 11 | 163 | 3.50e-20 | 84.7 |
| MS.gene61326.t1 | AT5G45750 | 28.638 | 213 | 129 | 6 | 6 | 207 | 13 | 213 | 5.16e-20 | 84.7 |
| MS.gene61326.t1 | AT5G64990 | 34.545 | 165 | 94 | 5 | 8 | 170 | 9 | 161 | 5.66e-20 | 84.3 |
| MS.gene61326.t1 | AT3G09900 | 31.818 | 176 | 107 | 5 | 6 | 179 | 15 | 179 | 6.15e-20 | 84.3 |
| MS.gene61326.t1 | AT4G18430 | 39.516 | 124 | 72 | 3 | 6 | 127 | 13 | 135 | 6.42e-20 | 84.3 |
| MS.gene61326.t1 | AT1G52280 | 30.097 | 206 | 121 | 7 | 6 | 197 | 8 | 204 | 6.56e-20 | 84.0 |
| MS.gene61326.t1 | AT5G03520 | 32.386 | 176 | 106 | 5 | 6 | 179 | 15 | 179 | 8.35e-20 | 84.0 |
| MS.gene61326.t1 | AT3G46830 | 29.834 | 181 | 113 | 5 | 6 | 184 | 12 | 180 | 9.35e-20 | 84.0 |
| MS.gene61326.t1 | AT3G46830 | 29.834 | 181 | 113 | 5 | 6 | 184 | 12 | 180 | 9.35e-20 | 84.0 |
| MS.gene61326.t1 | AT1G09630 | 31.522 | 184 | 112 | 5 | 6 | 187 | 12 | 183 | 1.16e-19 | 83.6 |
| MS.gene61326.t1 | AT3G15060 | 38.525 | 122 | 72 | 3 | 8 | 127 | 15 | 135 | 1.24e-19 | 83.6 |
| MS.gene61326.t1 | AT5G60860 | 29.891 | 184 | 115 | 4 | 6 | 187 | 13 | 184 | 1.53e-19 | 83.2 |
| MS.gene61326.t1 | AT2G44610 | 33.939 | 165 | 95 | 4 | 8 | 170 | 11 | 163 | 1.97e-19 | 82.8 |
| MS.gene61326.t1 | AT4G18800 | 29.348 | 184 | 116 | 5 | 6 | 187 | 13 | 184 | 2.53e-19 | 82.8 |
| MS.gene61326.t1 | AT5G65270 | 28.723 | 188 | 120 | 5 | 8 | 193 | 19 | 194 | 3.31e-19 | 82.8 |
| MS.gene61326.t1 | AT1G06400 | 36.364 | 121 | 74 | 3 | 6 | 124 | 13 | 132 | 3.56e-19 | 82.4 |
| MS.gene61326.t1 | AT4G19640 | 34.483 | 145 | 87 | 5 | 8 | 147 | 12 | 153 | 4.98e-19 | 81.3 |
| MS.gene61326.t1 | AT2G21880 | 30.270 | 185 | 114 | 5 | 6 | 184 | 9 | 184 | 6.10e-19 | 81.6 |
| MS.gene61326.t1 | AT5G10260 | 33.333 | 165 | 96 | 5 | 8 | 170 | 11 | 163 | 7.90e-19 | 81.3 |
| MS.gene61326.t1 | AT5G47520 | 28.000 | 200 | 130 | 5 | 2 | 199 | 10 | 197 | 7.94e-19 | 81.6 |
| MS.gene61326.t1 | AT4G19640 | 35.938 | 128 | 75 | 4 | 8 | 131 | 12 | 136 | 8.01e-19 | 79.7 |
| MS.gene61326.t1 | AT3G12160 | 38.462 | 117 | 69 | 3 | 8 | 122 | 17 | 132 | 1.28e-18 | 80.9 |
| MS.gene61326.t1 | AT1G28550 | 37.903 | 124 | 74 | 3 | 6 | 127 | 13 | 135 | 1.36e-18 | 80.9 |
| MS.gene61326.t1 | AT1G49300 | 29.126 | 206 | 123 | 6 | 6 | 197 | 8 | 204 | 1.49e-18 | 80.5 |
| MS.gene61326.t1 | AT1G49300 | 29.126 | 206 | 123 | 6 | 6 | 197 | 8 | 204 | 1.49e-18 | 80.5 |
| MS.gene61326.t1 | AT2G31680 | 30.055 | 183 | 114 | 5 | 6 | 186 | 12 | 182 | 1.69e-18 | 80.5 |
| MS.gene61326.t1 | AT4G39990 | 27.624 | 181 | 117 | 5 | 8 | 186 | 19 | 187 | 1.72e-18 | 80.9 |
| MS.gene61326.t1 | AT2G43130 | 29.508 | 183 | 115 | 5 | 6 | 186 | 12 | 182 | 2.48e-18 | 80.1 |
| MS.gene61326.t1 | AT2G33870 | 37.903 | 124 | 74 | 3 | 6 | 127 | 13 | 135 | 3.19e-18 | 79.7 |
| MS.gene61326.t1 | AT4G35860 | 34.586 | 133 | 73 | 5 | 47 | 177 | 2 | 122 | 4.25e-18 | 78.2 |
| MS.gene61326.t1 | AT4G09720 | 28.342 | 187 | 119 | 5 | 6 | 186 | 8 | 185 | 4.37e-18 | 79.3 |
| MS.gene61326.t1 | AT1G05810 | 29.508 | 183 | 115 | 5 | 6 | 186 | 12 | 182 | 5.58e-18 | 79.3 |
| MS.gene61326.t1 | AT4G09720 | 27.604 | 192 | 119 | 4 | 6 | 186 | 8 | 190 | 5.80e-18 | 79.0 |
| MS.gene61326.t1 | AT1G05810 | 29.508 | 183 | 115 | 5 | 6 | 186 | 58 | 228 | 8.07e-18 | 79.7 |
| MS.gene61326.t1 | AT5G64990 | 33.140 | 172 | 94 | 6 | 8 | 170 | 9 | 168 | 2.37e-17 | 77.4 |
| MS.gene61326.t1 | AT5G47960 | 35.897 | 117 | 72 | 3 | 8 | 122 | 17 | 132 | 3.69e-17 | 77.0 |
| MS.gene61326.t1 | AT4G09720 | 26.768 | 198 | 119 | 4 | 6 | 186 | 8 | 196 | 4.31e-17 | 76.6 |
| MS.gene61326.t1 | AT1G01200 | 37.607 | 117 | 70 | 3 | 8 | 122 | 30 | 145 | 6.59e-17 | 76.6 |
| MS.gene61326.t1 | AT3G07410 | 29.282 | 181 | 114 | 5 | 6 | 184 | 12 | 180 | 2.07e-16 | 75.1 |
| MS.gene61326.t1 | AT5G55080 | 30.909 | 165 | 99 | 5 | 7 | 170 | 14 | 164 | 3.43e-16 | 74.3 |
| MS.gene61326.t1 | AT5G27540 | 25.843 | 178 | 124 | 3 | 3 | 180 | 14 | 183 | 1.26e-15 | 75.1 |
| MS.gene61326.t1 | AT5G27540 | 25.843 | 178 | 124 | 3 | 3 | 180 | 14 | 183 | 1.26e-15 | 75.1 |
| MS.gene61326.t1 | AT3G09910 | 28.571 | 182 | 114 | 6 | 8 | 185 | 15 | 184 | 5.32e-15 | 70.9 |
| MS.gene61326.t1 | AT3G09910 | 28.571 | 182 | 114 | 6 | 8 | 185 | 15 | 184 | 5.32e-15 | 70.9 |
| MS.gene61326.t1 | AT3G09910 | 28.571 | 182 | 114 | 6 | 8 | 185 | 15 | 184 | 5.32e-15 | 70.9 |
| MS.gene61326.t1 | AT5G03520 | 32.090 | 134 | 79 | 4 | 47 | 179 | 47 | 169 | 2.03e-14 | 69.3 |
| MS.gene61326.t1 | AT3G09910 | 29.480 | 173 | 106 | 6 | 8 | 176 | 15 | 175 | 2.63e-14 | 68.9 |
| MS.gene61326.t1 | AT3G09910 | 29.480 | 173 | 106 | 6 | 8 | 176 | 15 | 175 | 2.63e-14 | 68.9 |
| MS.gene61326.t1 | AT5G59150 | 33.094 | 139 | 80 | 5 | 47 | 184 | 3 | 129 | 3.68e-14 | 67.8 |
| MS.gene61326.t1 | AT5G20020 | 33.051 | 118 | 77 | 2 | 7 | 123 | 14 | 130 | 4.15e-14 | 68.9 |
| MS.gene61326.t1 | AT5G55190 | 33.051 | 118 | 77 | 2 | 7 | 123 | 14 | 130 | 5.30e-14 | 68.6 |
| MS.gene61326.t1 | AT5G20010 | 33.051 | 118 | 77 | 2 | 7 | 123 | 14 | 130 | 6.30e-14 | 68.2 |
| MS.gene61326.t1 | AT3G63150 | 28.571 | 175 | 115 | 5 | 7 | 180 | 15 | 180 | 2.22e-13 | 68.6 |
| MS.gene61326.t1 | AT2G21880 | 29.697 | 165 | 101 | 5 | 26 | 184 | 4 | 159 | 3.44e-13 | 65.9 |
| MS.gene61326.t1 | AT2G21880 | 29.697 | 165 | 101 | 5 | 26 | 184 | 4 | 159 | 3.44e-13 | 65.9 |
Find 47 sgRNAs with CRISPR-Local
Find 165 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGATGGAAGCATTGTGAATT+TGG | 0.221827 | 6.3:-81201100 | MS.gene61326:CDS |
| GCATTGTGAATTTGGGTCTA+TGG | 0.227225 | 6.3:-81201092 | MS.gene61326:CDS |
| ACAAGAACAATTGGTACATT+AGG | 0.278025 | 6.3:+81199618 | None:intergenic |
| CTTGGCATTTCTTTCCTCCT+TGG | 0.280179 | 6.3:+81199037 | None:intergenic |
| CAAGAACAATTGGTACATTA+GGG | 0.336893 | 6.3:+81199619 | None:intergenic |
| GAAGAACTGAGGAAACAAAT+TGG | 0.341763 | 6.3:-81199256 | MS.gene61326:CDS |
| TACAGTGGGAAATTTGTTAC+TGG | 0.346209 | 6.3:+81201773 | None:intergenic |
| AATGTACCAATTGTTCTTGT+TGG | 0.346567 | 6.3:-81199615 | MS.gene61326:CDS |
| GGGGCGAATCTACGCAATTC+TGG | 0.349508 | 6.3:+81199639 | None:intergenic |
| GGCATTTCTTTCCTCCTTGG+AGG | 0.381404 | 6.3:+81199040 | None:intergenic |
| TTTGTACCAACAAGAACAAT+TGG | 0.404206 | 6.3:+81199609 | None:intergenic |
| TGTTCTTGTTGGTACAAAGT+TGG | 0.419030 | 6.3:-81199604 | MS.gene61326:CDS |
| AAGAACTGAGGAAACAAATT+GGG | 0.420070 | 6.3:-81199255 | MS.gene61326:CDS |
| GTTCTTGTTGGTACAAAGTT+GGG | 0.423240 | 6.3:-81199603 | MS.gene61326:intron |
| CACTTACACAAAGGAGCAAC+CGG | 0.439719 | 6.3:+81198994 | None:intergenic |
| CTATGAAAATGTTCTTAAGA+AGG | 0.449203 | 6.3:-81200845 | MS.gene61326:intron |
| TTGAGGCCACTGAGCTATAG+AGG | 0.451519 | 6.3:-81200913 | MS.gene61326:CDS |
| GATGGAAGCATTGTGAATTT+GGG | 0.458918 | 6.3:-81201099 | MS.gene61326:CDS |
| CATTGTGAATTTGGGTCTAT+GGG | 0.469495 | 6.3:-81201091 | MS.gene61326:CDS |
| AAGAAATGCCAAGGAAGAAA+AGG | 0.469586 | 6.3:-81199027 | MS.gene61326:CDS |
| TCAACCTGCTATAGTCCTCC+TGG | 0.472843 | 6.3:+81200932 | None:intergenic |
| GTGCAGCTCGAAGACTCAAC+AGG | 0.495930 | 6.3:-81199215 | MS.gene61326:intron |
| TACTACAGGGGTATTGTGTG+TGG | 0.529511 | 6.3:-81198319 | MS.gene61326:intron |
| CAAGGAAGAAAAGGCAAAGA+AGG | 0.532454 | 6.3:-81199018 | MS.gene61326:CDS |
| ACTGTTGGTGATGGTGCTGT+TGG | 0.537659 | 6.3:-81201822 | MS.gene61326:CDS |
| AAGAAAAGGCAAAGAAGGTC+CGG | 0.538145 | 6.3:-81199013 | MS.gene61326:CDS |
| TTCATTAAATGTGTCACTGT+TGG | 0.541909 | 6.3:-81201837 | MS.gene61326:CDS |
| TGGATACTTCGCTGATCACA+CGG | 0.547065 | 6.3:-81199459 | MS.gene61326:CDS |
| AGGTTGTTCTTCAACCTCCA+AGG | 0.567491 | 6.3:-81199054 | MS.gene61326:CDS |
| CTAAAATTATCAAATACTGT+TGG | 0.567683 | 6.3:+81201138 | None:intergenic |
| CAGGCCAGGAGGACTATAGC+AGG | 0.574193 | 6.3:-81200936 | MS.gene61326:CDS |
| AGTGCAAATGTAGCTGTGGA+TGG | 0.578876 | 6.3:-81201117 | MS.gene61326:CDS |
| AGGAGGACTATAGCAGGTTG+AGG | 0.592230 | 6.3:-81200930 | MS.gene61326:CDS |
| TAATGTTATAACATCTGCTG+AGG | 0.594423 | 6.3:-81199432 | MS.gene61326:intron |
| AAATGTGTCACTGTTGGTGA+TGG | 0.594720 | 6.3:-81201831 | MS.gene61326:CDS |
| TTGGGTCTATGGGACACTGC+AGG | 0.604628 | 6.3:-81201081 | MS.gene61326:intron |
| CAAGGAGGAAAGAAATGCCA+AGG | 0.611296 | 6.3:-81199036 | MS.gene61326:CDS |
| TTCAATGTTTGCAGGCCAGG+AGG | 0.616044 | 6.3:-81200947 | MS.gene61326:intron |
| TGTGATCAGCGAAGTATCCA+CGG | 0.618462 | 6.3:+81199462 | None:intergenic |
| TACAGGGGTATTGTGTGTGG+AGG | 0.623157 | 6.3:-81198316 | MS.gene61326:intron |
| TTAGATCTTCGTGAAGACCG+TGG | 0.645307 | 6.3:-81199479 | MS.gene61326:intron |
| GGATACTTCGCTGATCACAC+GGG | 0.662155 | 6.3:-81199458 | MS.gene61326:CDS |
| AGAACTGAGGAAACAAATTG+GGG | 0.674028 | 6.3:-81199254 | MS.gene61326:CDS |
| CTTTGCAGGGAGAAGAACTG+AGG | 0.677279 | 6.3:-81199267 | MS.gene61326:intron |
| TTGTTCTTCAACCTCCAAGG+AGG | 0.684078 | 6.3:-81199051 | MS.gene61326:CDS |
| TCTGCTCCTCTATAGCTCAG+TGG | 0.686899 | 6.3:+81200907 | None:intergenic |
| AAGAACAATTGGTACATTAG+GGG | 0.696220 | 6.3:+81199620 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTTTAATTTTTAATTTT+TGG | - | chr6.3:81198978-81198997 | MS.gene61326:intron | 0.0% |
| !!! | ATTTTTAATTTTTAATTTTT+GGG | - | chr6.3:81198979-81198998 | MS.gene61326:intron | 0.0% |
| !! | AAAGATCAAAAATTAAAAAA+TGG | + | chr6.3:81198463-81198482 | None:intergenic | 10.0% |
| !! | AAGATCAAAAATTAAAAAAT+GGG | + | chr6.3:81198462-81198481 | None:intergenic | 10.0% |
| !! | AATTATCAAATAAATTGATA+GGG | - | chr6.3:81199932-81199951 | MS.gene61326:intron | 10.0% |
| !! | ATTATAAAAATTACAGAAAT+AGG | + | chr6.3:81200270-81200289 | None:intergenic | 10.0% |
| !! | TAATTATCAAATAAATTGAT+AGG | - | chr6.3:81199931-81199950 | MS.gene61326:intron | 10.0% |
| !! | TAGGAAATTTATATAATATA+TGG | + | chr6.3:81198428-81198447 | None:intergenic | 10.0% |
| !!! | ACATTTTTTATAAACTTTTT+CGG | - | chr6.3:81198593-81198612 | MS.gene61326:intron | 10.0% |
| !!! | TTTTTTTCTTTCTTTTATTT+TGG | - | chr6.3:81199117-81199136 | MS.gene61326:intron | 10.0% |
| !! | AGATCAAAAATTAAAAAATG+GGG | + | chr6.3:81198461-81198480 | None:intergenic | 15.0% |
| !! | ATAAGTTAATAATAGCAAAT+AGG | + | chr6.3:81201535-81201554 | None:intergenic | 15.0% |
| !! | ATGATTCAATTTCAAATTAT+CGG | + | chr6.3:81201199-81201218 | None:intergenic | 15.0% |
| !! | TATTTATTATGGTTTCAAAT+AGG | + | chr6.3:81199909-81199928 | None:intergenic | 15.0% |
| !! | TGCTATTATTAACTTATATT+AGG | - | chr6.3:81201538-81201557 | MS.gene61326:intron | 15.0% |
| !!! | AAAAGAAAAAGTATTATAAG+AGG | + | chr6.3:81199361-81199380 | None:intergenic | 15.0% |
| !!! | ATAGAGATTTTTTAATAGTA+AGG | - | chr6.3:81201322-81201341 | MS.gene61326:intron | 15.0% |
| !!! | TTGTTTTCTTAACAAATAAT+GGG | - | chr6.3:81199177-81199196 | MS.gene61326:intron | 15.0% |
| !!! | TTTGTTTTCTTAACAAATAA+TGG | - | chr6.3:81199176-81199195 | MS.gene61326:intron | 15.0% |
| !! | AATGTAATCTTCAACATAAA+TGG | - | chr6.3:81200095-81200114 | MS.gene61326:intron | 20.0% |
| !! | ACATCAAATAAGTTATTGAA+CGG | + | chr6.3:81200813-81200832 | None:intergenic | 20.0% |
| !! | ATGTAATCTTCAACATAAAT+GGG | - | chr6.3:81200096-81200115 | MS.gene61326:intron | 20.0% |
| !! | CAAACTTTACCTTTATAAAT+AGG | - | chr6.3:81200139-81200158 | MS.gene61326:intron | 20.0% |
| !! | CAAATAGGTTAAATTAGTTA+TGG | + | chr6.3:81201520-81201539 | None:intergenic | 20.0% |
| !! | CTAAAATTATCAAATACTGT+TGG | + | chr6.3:81199020-81199039 | None:intergenic | 20.0% |
| !! | TGAATCATACTTTAAATCAT+CGG | - | chr6.3:81201211-81201230 | MS.gene61326:intron | 20.0% |
| !! | TGATCACTTATACTAATATA+GGG | - | chr6.3:81198809-81198828 | MS.gene61326:intron | 20.0% |
| !! | TTCAAATTTATGATGTATGT+TGG | - | chr6.3:81200989-81201008 | MS.gene61326:intron | 20.0% |
| !!! | ATTTTGTACTTTTATTGTTC+TGG | - | chr6.3:81200595-81200614 | MS.gene61326:intron | 20.0% |
| !!! | ATTTTTTTTTCAATGTTTGC+AGG | - | chr6.3:81199200-81199219 | MS.gene61326:intron | 20.0% |
| !!! | TAAATTTGACAACACATTTT+TGG | - | chr6.3:81200167-81200186 | MS.gene61326:intron | 20.0% |
| !!! | TATCTTTTTTTCTTACTACA+GGG | - | chr6.3:81201823-81201842 | MS.gene61326:CDS | 20.0% |
| !!! | TATGATTTTTGATTTGTGTA+AGG | - | chr6.3:81198882-81198901 | MS.gene61326:intron | 20.0% |
| !!! | TTTTCTCTTGTTTCTATTTT+TGG | - | chr6.3:81199392-81199411 | MS.gene61326:intron | 20.0% |
| ! | AACAAGAAGAAATATTACAG+TGG | + | chr6.3:81198400-81198419 | None:intergenic | 25.0% |
| ! | AATTAAGCACATGATAACAT+TGG | + | chr6.3:81198847-81198866 | None:intergenic | 25.0% |
| ! | ACAAGAAGAAATATTACAGT+GGG | + | chr6.3:81198399-81198418 | None:intergenic | 25.0% |
| ! | AGTAAGGAAATTAGATTGTT+AGG | - | chr6.3:81201338-81201357 | MS.gene61326:intron | 25.0% |
| ! | CATAAACACTTACATGATAA+TGG | - | chr6.3:81199638-81199657 | MS.gene61326:CDS | 25.0% |
| ! | CTATGAAAATGTTCTTAAGA+AGG | - | chr6.3:81199310-81199329 | MS.gene61326:intron | 25.0% |
| ! | CTGATCACTTATACTAATAT+AGG | - | chr6.3:81198808-81198827 | MS.gene61326:intron | 25.0% |
| ! | TAAACAAGTTAATCTTTGCA+GGG | - | chr6.3:81200875-81200894 | MS.gene61326:CDS | 25.0% |
| ! | TAGTTTCTTCTTCTCTTAAT+AGG | + | chr6.3:81200629-81200648 | None:intergenic | 25.0% |
| ! | TGTAATCTTCAACATAAATG+GGG | - | chr6.3:81200097-81200116 | MS.gene61326:intron | 25.0% |
| ! | TTAAACAAGTTAATCTTTGC+AGG | - | chr6.3:81200874-81200893 | MS.gene61326:CDS | 25.0% |
| ! | TTCTTCTCTTAATAGGTTAA+AGG | + | chr6.3:81200622-81200641 | None:intergenic | 25.0% |
| ! | TTTAGTGCACCTATTTATAA+AGG | + | chr6.3:81200151-81200170 | None:intergenic | 25.0% |
| ! | TTTCATAAGTTCTTCAAGAT+AGG | - | chr6.3:81198621-81198640 | MS.gene61326:intron | 25.0% |
| !! | AGTTTTTGATACTGCAATTA+AGG | - | chr6.3:81201081-81201100 | MS.gene61326:intron | 25.0% |
| !! | TTTTTAACAGTCCTGATATA+CGG | + | chr6.3:81201581-81201600 | None:intergenic | 25.0% |
| !!! | AAAATGGGGAAACTTTTTTT+AGG | + | chr6.3:81198447-81198466 | None:intergenic | 25.0% |
| !!! | ATCTTTTTTTCTTACTACAG+GGG | - | chr6.3:81201824-81201843 | MS.gene61326:CDS | 25.0% |
| !!! | ATTTTTAATTTTTGGGTTGC+AGG | - | chr6.3:81198986-81199005 | MS.gene61326:intron | 25.0% |
| !!! | CTATCTTTTTTTCTTACTAC+AGG | - | chr6.3:81201822-81201841 | MS.gene61326:CDS | 25.0% |
| !!! | TCAAGTTGAAAATGAATCTT+TGG | - | chr6.3:81199988-81200007 | MS.gene61326:intron | 25.0% |
| !!! | TTTGCATGTTGATGATAAAT+GGG | - | chr6.3:81199711-81199730 | MS.gene61326:intron | 25.0% |
| !!! | TTTTTTGTTTTCTCTTTCAG+TGG | - | chr6.3:81200490-81200509 | MS.gene61326:intron | 25.0% |
| AAAAAAACGAACCGTATATC+AGG | - | chr6.3:81201567-81201586 | MS.gene61326:intron | 30.0% | |
| AACATGAAGAAATCCAAACA+AGG | + | chr6.3:81199447-81199466 | None:intergenic | 30.0% | |
| AAGAACAATTGGTACATTAG+GGG | + | chr6.3:81200538-81200557 | None:intergenic | 30.0% | |
| AAGAACTGAGGAAACAAATT+GGG | - | chr6.3:81200900-81200919 | MS.gene61326:CDS | 30.0% | |
| AATAAGCTGTTTATCCAAAC+AGG | - | chr6.3:81198747-81198766 | MS.gene61326:intron | 30.0% | |
| AATGTACCAATTGTTCTTGT+TGG | - | chr6.3:81200540-81200559 | MS.gene61326:intron | 30.0% | |
| ACAAGAACAATTGGTACATT+AGG | + | chr6.3:81200540-81200559 | None:intergenic | 30.0% | |
| ACATGAAGAAATCCAAACAA+GGG | + | chr6.3:81199446-81199465 | None:intergenic | 30.0% | |
| ACTATATACTATGAGCTAGT+TGG | - | chr6.3:81198511-81198530 | MS.gene61326:intron | 30.0% | |
| ATAAGCTGTTTATCCAAACA+GGG | - | chr6.3:81198748-81198767 | MS.gene61326:intron | 30.0% | |
| CAAGAACAATTGGTACATTA+GGG | + | chr6.3:81200539-81200558 | None:intergenic | 30.0% | |
| GTTGAAAATGAATCTTTGGT+TGG | - | chr6.3:81199992-81200011 | MS.gene61326:intron | 30.0% | |
| TAATGTTATAACATCTGCTG+AGG | - | chr6.3:81200723-81200742 | MS.gene61326:intron | 30.0% | |
| TGGTGAGAATGATCTATTAT+CGG | + | chr6.3:81200358-81200377 | None:intergenic | 30.0% | |
| TTGTGTAAGGATTCTAATTC+TGG | - | chr6.3:81198895-81198914 | MS.gene61326:intron | 30.0% | |
| TTTGTACCAACAAGAACAAT+TGG | + | chr6.3:81200549-81200568 | None:intergenic | 30.0% | |
| ! | AGCTTATTCATAAGCTTGTT+AGG | - | chr6.3:81199536-81199555 | MS.gene61326:intron | 30.0% |
| ! | GTTTTGTCAAACTGTTGTAA+TGG | + | chr6.3:81201417-81201436 | None:intergenic | 30.0% |
| ! | TCACGTGATTTCAACTATTT+TGG | - | chr6.3:81201690-81201709 | MS.gene61326:intron | 30.0% |
| ! | TTCAAATTGGTTTAGTGGTT+TGG | + | chr6.3:81201605-81201624 | None:intergenic | 30.0% |
| ! | TTCATTAAATGTGTCACTGT+TGG | - | chr6.3:81198318-81198337 | MS.gene61326:intron | 30.0% |
| ! | TTGATTCGAAAACACAGAAT+CGG | + | chr6.3:81201496-81201515 | None:intergenic | 30.0% |
| !! | ACTTTAAATCATCGGTTTGA+TGG | - | chr6.3:81201219-81201238 | MS.gene61326:intron | 30.0% |
| !! | ATAAGTTTTGTGAGACTGTT+TGG | - | chr6.3:81198566-81198585 | MS.gene61326:intron | 30.0% |
| !! | GTTTGCATGTTGATGATAAA+TGG | - | chr6.3:81199710-81199729 | MS.gene61326:intron | 30.0% |
| !! | TAATGTTCTTAGCTCTAGAT+CGG | - | chr6.3:81200452-81200471 | MS.gene61326:intron | 30.0% |
| AAGAAATGCCAAGGAAGAAA+AGG | - | chr6.3:81201128-81201147 | MS.gene61326:CDS | 35.0% | |
| ACAAACCATTAACACGAGTT+TGG | + | chr6.3:81201443-81201462 | None:intergenic | 35.0% | |
| ACTTATTTGATGTGTTAGCG+AGG | - | chr6.3:81200820-81200839 | MS.gene61326:intron | 35.0% | |
| AGAACTGAGGAAACAAATTG+GGG | - | chr6.3:81200901-81200920 | MS.gene61326:CDS | 35.0% | |
| AGATAGAAGTCAACAAGCTA+TGG | + | chr6.3:81200027-81200046 | None:intergenic | 35.0% | |
| ATCATCAAGTAGCTATCACT+AGG | + | chr6.3:81200054-81200073 | None:intergenic | 35.0% | |
| CATAACATAGAGATCTACCT+CGG | - | chr6.3:81200376-81200395 | MS.gene61326:intron | 35.0% | |
| CATTGTGAATTTGGGTCTAT+GGG | - | chr6.3:81199064-81199083 | MS.gene61326:CDS | 35.0% | |
| GAAGAACTGAGGAAACAAAT+TGG | - | chr6.3:81200899-81200918 | MS.gene61326:CDS | 35.0% | |
| GAGGAAGCAAAGAAATAGTT+AGG | + | chr6.3:81199342-81199361 | None:intergenic | 35.0% | |
| GTTCTTGTTGGTACAAAGTT+GGG | - | chr6.3:81200552-81200571 | MS.gene61326:intron | 35.0% | |
| TATCATCAACATGCAAACAC+AGG | + | chr6.3:81199708-81199727 | None:intergenic | 35.0% | |
| TGTTCTTGTTGGTACAAAGT+TGG | - | chr6.3:81200551-81200570 | MS.gene61326:intron | 35.0% | |
| TTGTTCATATAGACCCTGTT+TGG | + | chr6.3:81198764-81198783 | None:intergenic | 35.0% | |
| ! | AGTGATAGCTACTTGATGAT+AGG | - | chr6.3:81200054-81200073 | MS.gene61326:intron | 35.0% |
| ! | AGTTAGATTTTGCCCTTGTT+TGG | - | chr6.3:81199431-81199450 | MS.gene61326:intron | 35.0% |
| ! | GTGATAGCTACTTGATGATA+GGG | - | chr6.3:81200055-81200074 | MS.gene61326:intron | 35.0% |
| ! | TTGATGATAAATGGGAGGAA+AGG | - | chr6.3:81199719-81199738 | MS.gene61326:intron | 35.0% |
| ! | TTTTAGTGCAAATGTAGCTG+TGG | - | chr6.3:81199034-81199053 | MS.gene61326:CDS | 35.0% |
| !! | GATGGAAGCATTGTGAATTT+GGG | - | chr6.3:81199056-81199075 | MS.gene61326:CDS | 35.0% |
| !! | TAAATCATCGGTTTGATGGA+TGG | - | chr6.3:81201223-81201242 | MS.gene61326:intron | 35.0% |
| !! | TACAGTGGGAAATTTGTTAC+TGG | + | chr6.3:81198385-81198404 | None:intergenic | 35.0% |
| !! | TTAGGCAAGTTGATATTGCT+AGG | - | chr6.3:81201356-81201375 | MS.gene61326:intron | 35.0% |
| AAGAAAAGGCAAAGAAGGTC+CGG | - | chr6.3:81201142-81201161 | MS.gene61326:CDS | 40.0% | |
| ACTGACCAAACTCGTGTTAA+TGG | - | chr6.3:81201435-81201454 | MS.gene61326:intron | 40.0% | |
| AGGCATGGATCAGTTCTTTA+CGG | + | chr6.3:81201633-81201652 | None:intergenic | 40.0% | |
| CAAATTATCGGAGCAAGAGA+CGG | + | chr6.3:81201187-81201206 | None:intergenic | 40.0% | |
| CAAGGAAGAAAAGGCAAAGA+AGG | - | chr6.3:81201137-81201156 | MS.gene61326:CDS | 40.0% | |
| CGAGGTAGATCTCTATGTTA+TGG | + | chr6.3:81200378-81200397 | None:intergenic | 40.0% | |
| GATATTGCTAGGACTGTTGA+TGG | - | chr6.3:81201367-81201386 | MS.gene61326:intron | 40.0% | |
| GCATTGTGAATTTGGGTCTA+TGG | - | chr6.3:81199063-81199082 | MS.gene61326:CDS | 40.0% | |
| TAGAAGTCAACAAGCTATGG+TGG | + | chr6.3:81200024-81200043 | None:intergenic | 40.0% | |
| TCGAAGACTCAACAGGTAAT+TGG | - | chr6.3:81200947-81200966 | MS.gene61326:intron | 40.0% | |
| TGATAACATCTCAGACTCTC+AGG | + | chr6.3:81201764-81201783 | None:intergenic | 40.0% | |
| ! | AAATGTGTCACTGTTGGTGA+TGG | - | chr6.3:81198324-81198343 | MS.gene61326:intron | 40.0% |
| ! | CAACTTGTTCGTGAACTATC+AGG | + | chr6.3:81201653-81201672 | None:intergenic | 40.0% |
| ! | CTTCTTTGCCTTTTCTTCCT+TGG | + | chr6.3:81201139-81201158 | None:intergenic | 40.0% |
| ! | GTTTTGTGAGACTGTTTGGA+AGG | - | chr6.3:81198570-81198589 | MS.gene61326:intron | 40.0% |
| ! | TGCGGTTCAAATTGGTTTAG+TGG | + | chr6.3:81201610-81201629 | None:intergenic | 40.0% |
| !! | GACTGTTGATGGTTCAATTC+AGG | - | chr6.3:81201378-81201397 | MS.gene61326:intron | 40.0% |
| !! | GCATGTTGATGATAAATGGG+AGG | - | chr6.3:81199714-81199733 | MS.gene61326:intron | 40.0% |
| !! | GGATGGAAGCATTGTGAATT+TGG | - | chr6.3:81199055-81199074 | MS.gene61326:CDS | 40.0% |
| !! | GTTGATGGTTCAATTCAGGA+AGG | - | chr6.3:81201382-81201401 | MS.gene61326:intron | 40.0% |
| !! | TTTTTCAATGTTTGCAGGCC+AGG | - | chr6.3:81199205-81199224 | MS.gene61326:intron | 40.0% |
| AACATGCAAACACAGGCTCA+TGG | + | chr6.3:81199701-81199720 | None:intergenic | 45.0% | |
| AAGAGACGGCACTTACACAA+AGG | + | chr6.3:81201173-81201192 | None:intergenic | 45.0% | |
| AGGTTGTTCTTCAACCTCCA+AGG | - | chr6.3:81201101-81201120 | MS.gene61326:CDS | 45.0% | |
| AGTGCAAATGTAGCTGTGGA+TGG | - | chr6.3:81199038-81199057 | MS.gene61326:CDS | 45.0% | |
| CAAGGAGGAAAGAAATGCCA+AGG | - | chr6.3:81201119-81201138 | MS.gene61326:CDS | 45.0% | |
| CACTTACACAAAGGAGCAAC+CGG | + | chr6.3:81201164-81201183 | None:intergenic | 45.0% | |
| CTTGGCATTTCTTTCCTCCT+TGG | + | chr6.3:81201121-81201140 | None:intergenic | 45.0% | |
| CTTTACGGTGCGGTTCAAAT+TGG | + | chr6.3:81201618-81201637 | None:intergenic | 45.0% | |
| GCACTTGTGAGACTGTTTGA+GGG | - | chr6.3:81199471-81199490 | MS.gene61326:CDS | 45.0% | |
| TGCACTTGTGAGACTGTTTG+AGG | - | chr6.3:81199470-81199489 | MS.gene61326:CDS | 45.0% | |
| TGGATACTTCGCTGATCACA+CGG | - | chr6.3:81200696-81200715 | MS.gene61326:intron | 45.0% | |
| TGGATCAGTTCTTTACGGTG+CGG | + | chr6.3:81201628-81201647 | None:intergenic | 45.0% | |
| TGTTCGTGAACTATCAGGCA+TGG | + | chr6.3:81201648-81201667 | None:intergenic | 45.0% | |
| TTAGATCTTCGTGAAGACCG+TGG | - | chr6.3:81200676-81200695 | MS.gene61326:intron | 45.0% | |
| TTGTTCTTCAACCTCCAAGG+AGG | - | chr6.3:81201104-81201123 | MS.gene61326:CDS | 45.0% | |
| ! | TGTGATCAGCGAAGTATCCA+CGG | + | chr6.3:81200696-81200715 | None:intergenic | 45.0% |
| !! | TACTACAGGGGTATTGTGTG+TGG | - | chr6.3:81201836-81201855 | MS.gene61326:CDS | 45.0% |
| !! | TGATAATTATTTATTTATTA+TGG | + | chr6.3:81199920-81199939 | None:intergenic | 5.0% |
| !!! | GTAATTTTTATAATAATTTT+GGG | - | chr6.3:81200276-81200295 | MS.gene61326:intron | 5.0% |
| !!! | TGTAATTTTTATAATAATTT+TGG | - | chr6.3:81200275-81200294 | MS.gene61326:intron | 5.0% |
| AGGAGGACTATAGCAGGTTG+AGG | - | chr6.3:81199225-81199244 | MS.gene61326:CDS | 50.0% | |
| CTTTGCAGGGAGAAGAACTG+AGG | - | chr6.3:81200888-81200907 | MS.gene61326:CDS | 50.0% | |
| GGATACTTCGCTGATCACAC+GGG | - | chr6.3:81200697-81200716 | MS.gene61326:intron | 50.0% | |
| GGCATTTCTTTCCTCCTTGG+AGG | + | chr6.3:81201118-81201137 | None:intergenic | 50.0% | |
| TCAACCTGCTATAGTCCTCC+TGG | + | chr6.3:81199226-81199245 | None:intergenic | 50.0% | |
| TCTGCTCCTCTATAGCTCAG+TGG | + | chr6.3:81199251-81199270 | None:intergenic | 50.0% | |
| TGCAAACACAGGCTCATGGT+TGG | + | chr6.3:81199697-81199716 | None:intergenic | 50.0% | |
| TTCAATGTTTGCAGGCCAGG+AGG | - | chr6.3:81199208-81199227 | MS.gene61326:intron | 50.0% | |
| TTGAGGCCACTGAGCTATAG+AGG | - | chr6.3:81199242-81199261 | MS.gene61326:CDS | 50.0% | |
| !! | ACTGTTGGTGATGGTGCTGT+TGG | - | chr6.3:81198333-81198352 | MS.gene61326:intron | 50.0% |
| !! | TACAGGGGTATTGTGTGTGG+AGG | - | chr6.3:81201839-81201858 | MS.gene61326:CDS | 50.0% |
| AGATCTACCTCGGCATTGCG+AGG | - | chr6.3:81200386-81200405 | MS.gene61326:intron | 55.0% | |
| GGGGCGAATCTACGCAATTC+TGG | + | chr6.3:81200519-81200538 | None:intergenic | 55.0% | |
| GTGCAGCTCGAAGACTCAAC+AGG | - | chr6.3:81200940-81200959 | MS.gene61326:intron | 55.0% | |
| TTGGGTCTATGGGACACTGC+AGG | - | chr6.3:81199074-81199093 | MS.gene61326:CDS | 55.0% | |
| CAGAAAGCCTCGCAATGCCG+AGG | + | chr6.3:81200396-81200415 | None:intergenic | 60.0% | |
| CAGGCCAGGAGGACTATAGC+AGG | - | chr6.3:81199219-81199238 | MS.gene61326:CDS | 60.0% | |
| CTCGGCATTGCGAGGCTTTC+TGG | - | chr6.3:81200394-81200413 | MS.gene61326:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 81198303 | 81201874 | 81198303 | ID=MS.gene61326 |
| chr6.3 | mRNA | 81198303 | 81201874 | 81198303 | ID=MS.gene61326.t1;Parent=MS.gene61326 |
| chr6.3 | exon | 81201776 | 81201874 | 81201776 | ID=MS.gene61326.t1.exon1;Parent=MS.gene61326.t1 |
| chr6.3 | CDS | 81201776 | 81201874 | 81201776 | ID=cds.MS.gene61326.t1;Parent=MS.gene61326.t1 |
| chr6.3 | exon | 81201082 | 81201169 | 81201082 | ID=MS.gene61326.t1.exon2;Parent=MS.gene61326.t1 |
| chr6.3 | CDS | 81201082 | 81201169 | 81201082 | ID=cds.MS.gene61326.t1;Parent=MS.gene61326.t1 |
| chr6.3 | exon | 81200846 | 81200955 | 81200846 | ID=MS.gene61326.t1.exon3;Parent=MS.gene61326.t1 |
| chr6.3 | CDS | 81200846 | 81200955 | 81200846 | ID=cds.MS.gene61326.t1;Parent=MS.gene61326.t1 |
| chr6.3 | exon | 81199604 | 81199667 | 81199604 | ID=MS.gene61326.t1.exon4;Parent=MS.gene61326.t1 |
| chr6.3 | CDS | 81199604 | 81199667 | 81199604 | ID=cds.MS.gene61326.t1;Parent=MS.gene61326.t1 |
| chr6.3 | exon | 81199433 | 81199497 | 81199433 | ID=MS.gene61326.t1.exon5;Parent=MS.gene61326.t1 |
| chr6.3 | CDS | 81199433 | 81199497 | 81199433 | ID=cds.MS.gene61326.t1;Parent=MS.gene61326.t1 |
| chr6.3 | exon | 81199216 | 81199281 | 81199216 | ID=MS.gene61326.t1.exon6;Parent=MS.gene61326.t1 |
| chr6.3 | CDS | 81199216 | 81199281 | 81199216 | ID=cds.MS.gene61326.t1;Parent=MS.gene61326.t1 |
| chr6.3 | exon | 81199001 | 81199107 | 81199001 | ID=MS.gene61326.t1.exon7;Parent=MS.gene61326.t1 |
| chr6.3 | CDS | 81199001 | 81199107 | 81199001 | ID=cds.MS.gene61326.t1;Parent=MS.gene61326.t1 |
| chr6.3 | exon | 81198303 | 81198333 | 81198303 | ID=MS.gene61326.t1.exon8;Parent=MS.gene61326.t1 |
| chr6.3 | CDS | 81198303 | 81198333 | 81198303 | ID=cds.MS.gene61326.t1;Parent=MS.gene61326.t1 |
| Gene Sequence |
| Protein sequence |
