Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61373.t1 | XP_003620673.1 | 98.4 | 514 | 8 | 0 | 1 | 514 | 1 | 514 | 1.40E-288 | 1001.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61373.t1 | Q93ZA0 | 75.4 | 451 | 106 | 2 | 69 | 514 | 46 | 496 | 3.1e-191 | 669.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61373.t1 | G7KPV9 | 98.4 | 514 | 8 | 0 | 1 | 514 | 1 | 514 | 1.0e-288 | 1001.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049257 | MS.gene61373 | 0.825172 | 5.42E-54 | -1.69E-46 |
| MS.gene049757 | MS.gene61373 | 0.803538 | 3.32E-49 | -1.69E-46 |
| MS.gene050060 | MS.gene61373 | 0.837959 | 3.82E-57 | -1.69E-46 |
| MS.gene050133 | MS.gene61373 | -0.826168 | 3.15E-54 | -1.69E-46 |
| MS.gene050426 | MS.gene61373 | -0.810209 | 1.29E-50 | -1.69E-46 |
| MS.gene050553 | MS.gene61373 | 0.838774 | 2.35E-57 | -1.69E-46 |
| MS.gene05081 | MS.gene61373 | 0.837845 | 4.09E-57 | -1.69E-46 |
| MS.gene051525 | MS.gene61373 | 0.806311 | 8.75E-50 | -1.69E-46 |
| MS.gene051552 | MS.gene61373 | -0.820478 | 6.72E-53 | -1.69E-46 |
| MS.gene051838 | MS.gene61373 | 0.832962 | 7.01E-56 | -1.69E-46 |
| MS.gene052134 | MS.gene61373 | 0.829847 | 4.09E-55 | -1.69E-46 |
| MS.gene052135 | MS.gene61373 | 0.812963 | 3.25E-51 | -1.69E-46 |
| MS.gene052469 | MS.gene61373 | 0.902231 | 1.20E-78 | -1.69E-46 |
| MS.gene052870 | MS.gene61373 | 0.826093 | 3.28E-54 | -1.69E-46 |
| MS.gene052872 | MS.gene61373 | 0.830151 | 3.45E-55 | -1.69E-46 |
| MS.gene053330 | MS.gene61373 | 0.813071 | 3.08E-51 | -1.69E-46 |
| MS.gene053824 | MS.gene61373 | 0.813629 | 2.32E-51 | -1.69E-46 |
| MS.gene054107 | MS.gene61373 | 0.817605 | 3.02E-52 | -1.69E-46 |
| MS.gene054344 | MS.gene61373 | 0.80524 | 1.47E-49 | -1.69E-46 |
| MS.gene054884 | MS.gene61373 | -0.848686 | 5.23E-60 | -1.69E-46 |
| MS.gene05494 | MS.gene61373 | 0.800975 | 1.12E-48 | -1.69E-46 |
| MS.gene055539 | MS.gene61373 | 0.865299 | 6.53E-65 | -1.69E-46 |
| MS.gene05556 | MS.gene61373 | 0.838665 | 2.51E-57 | -1.69E-46 |
| MS.gene055741 | MS.gene61373 | 0.816816 | 4.55E-52 | -1.69E-46 |
| MS.gene055744 | MS.gene61373 | 0.818257 | 2.15E-52 | -1.69E-46 |
| MS.gene05589 | MS.gene61373 | 0.805221 | 1.48E-49 | -1.69E-46 |
| MS.gene056508 | MS.gene61373 | 0.810666 | 1.03E-50 | -1.69E-46 |
| MS.gene056633 | MS.gene61373 | 0.814809 | 1.28E-51 | -1.69E-46 |
| MS.gene056664 | MS.gene61373 | 0.803539 | 3.32E-49 | -1.69E-46 |
| MS.gene057332 | MS.gene61373 | 0.816994 | 4.15E-52 | -1.69E-46 |
| MS.gene058418 | MS.gene61373 | -0.810499 | 1.12E-50 | -1.69E-46 |
| MS.gene058444 | MS.gene61373 | 0.853028 | 3.13E-61 | -1.69E-46 |
| MS.gene058838 | MS.gene61373 | 0.803362 | 3.61E-49 | -1.69E-46 |
| MS.gene05914 | MS.gene61373 | 0.805425 | 1.34E-49 | -1.69E-46 |
| MS.gene059512 | MS.gene61373 | 0.805422 | 1.35E-49 | -1.69E-46 |
| MS.gene059717 | MS.gene61373 | 0.838013 | 3.70E-57 | -1.69E-46 |
| MS.gene060087 | MS.gene61373 | -0.801576 | 8.44E-49 | -1.69E-46 |
| MS.gene060717 | MS.gene61373 | 0.842704 | 2.20E-58 | -1.69E-46 |
| MS.gene061231 | MS.gene61373 | 0.910151 | 2.58E-82 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61373.t1 | MTR_6g088500 | 98.444 | 514 | 8 | 0 | 1 | 514 | 1 | 514 | 0.0 | 1038 |
| MS.gene61373.t1 | MTR_6g088500 | 97.938 | 388 | 8 | 0 | 1 | 388 | 1 | 388 | 0.0 | 778 |
| MS.gene61373.t1 | MTR_8g044240 | 45.161 | 248 | 116 | 4 | 180 | 422 | 71 | 303 | 8.11e-62 | 206 |
| MS.gene61373.t1 | MTR_4g058810 | 25.463 | 216 | 146 | 4 | 172 | 386 | 5 | 206 | 2.00e-14 | 73.9 |
| MS.gene61373.t1 | MTR_4g058840 | 25.000 | 216 | 147 | 4 | 172 | 386 | 5 | 206 | 5.14e-14 | 72.8 |
| MS.gene61373.t1 | MTR_4g058820 | 25.000 | 216 | 147 | 4 | 172 | 386 | 5 | 206 | 5.14e-14 | 72.8 |
| MS.gene61373.t1 | MTR_7g105590 | 27.723 | 202 | 120 | 5 | 184 | 382 | 14 | 192 | 1.02e-13 | 70.5 |
| MS.gene61373.t1 | MTR_3g086210 | 26.923 | 234 | 141 | 10 | 164 | 386 | 31 | 245 | 1.61e-13 | 72.0 |
| MS.gene61373.t1 | MTR_1g051165 | 22.581 | 217 | 156 | 3 | 172 | 386 | 8 | 214 | 1.04e-11 | 65.9 |
| MS.gene61373.t1 | MTR_3g068085 | 24.303 | 251 | 161 | 8 | 184 | 433 | 21 | 243 | 1.13e-11 | 65.9 |
| MS.gene61373.t1 | MTR_7g063360 | 26.829 | 205 | 129 | 6 | 184 | 387 | 22 | 206 | 1.19e-11 | 65.5 |
| MS.gene61373.t1 | MTR_3g086190 | 25.541 | 231 | 140 | 8 | 169 | 386 | 29 | 240 | 5.76e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61373.t1 | AT4G13250 | 75.388 | 451 | 106 | 2 | 69 | 514 | 46 | 496 | 0.0 | 695 |
| MS.gene61373.t1 | AT4G13250 | 74.945 | 451 | 106 | 3 | 69 | 514 | 46 | 494 | 0.0 | 686 |
| MS.gene61373.t1 | AT5G04900 | 42.308 | 286 | 137 | 6 | 180 | 453 | 79 | 348 | 3.73e-64 | 213 |
| MS.gene61373.t1 | AT1G24360 | 27.273 | 209 | 123 | 6 | 183 | 386 | 79 | 263 | 5.94e-14 | 73.2 |
| MS.gene61373.t1 | AT1G10310 | 30.144 | 209 | 125 | 4 | 181 | 389 | 18 | 205 | 1.39e-13 | 70.9 |
| MS.gene61373.t1 | AT5G65205 | 29.665 | 209 | 121 | 6 | 183 | 390 | 11 | 194 | 3.45e-13 | 70.5 |
| MS.gene61373.t1 | AT3G46170 | 22.672 | 247 | 171 | 4 | 172 | 415 | 20 | 249 | 4.98e-13 | 70.1 |
| MS.gene61373.t1 | AT3G55310 | 23.171 | 246 | 171 | 4 | 172 | 415 | 11 | 240 | 7.83e-13 | 69.3 |
| MS.gene61373.t1 | AT3G55290 | 22.672 | 247 | 173 | 4 | 171 | 415 | 11 | 241 | 1.93e-12 | 68.2 |
| MS.gene61373.t1 | AT3G55290 | 22.672 | 247 | 173 | 4 | 171 | 415 | 10 | 240 | 2.00e-12 | 68.2 |
| MS.gene61373.t1 | AT4G13180 | 27.273 | 231 | 142 | 8 | 181 | 405 | 16 | 226 | 2.67e-12 | 67.4 |
| MS.gene61373.t1 | AT1G63380 | 23.853 | 218 | 148 | 5 | 172 | 386 | 9 | 211 | 3.09e-12 | 67.8 |
| MS.gene61373.t1 | AT1G63380 | 23.853 | 218 | 148 | 5 | 172 | 386 | 16 | 218 | 3.40e-12 | 67.8 |
| MS.gene61373.t1 | AT1G63380 | 23.853 | 218 | 148 | 5 | 172 | 386 | 11 | 213 | 3.46e-12 | 67.4 |
| MS.gene61373.t1 | AT1G63380 | 23.853 | 218 | 148 | 5 | 172 | 386 | 13 | 215 | 3.57e-12 | 67.4 |
| MS.gene61373.t1 | AT5G06060 | 25.581 | 258 | 155 | 8 | 181 | 433 | 12 | 237 | 1.83e-11 | 65.1 |
| MS.gene61373.t1 | AT1G62610 | 22.936 | 218 | 150 | 4 | 172 | 386 | 7 | 209 | 7.56e-11 | 63.5 |
| MS.gene61373.t1 | AT1G62610 | 22.936 | 218 | 150 | 4 | 172 | 386 | 9 | 211 | 7.71e-11 | 63.5 |
| MS.gene61373.t1 | AT1G62610 | 22.936 | 218 | 150 | 4 | 172 | 386 | 8 | 210 | 7.85e-11 | 63.5 |
Find 124 sgRNAs with CRISPR-Local
Find 257 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATGTTCTAGCAACAGTTTC+AGG | 0.185260 | 6.3:-80470149 | None:intergenic |
| TCATCTGGGGTGTTTGGTTT+TGG | 0.190160 | 6.3:+80466649 | MS.gene61373:CDS |
| GCACGGGAGTTTCTTCTTTC+GGG | 0.194024 | 6.3:+80468203 | MS.gene61373:CDS |
| GTGAAACTTCAAATAGAAAA+TGG | 0.225138 | 6.3:+80466775 | MS.gene61373:CDS |
| AACAAGATTGCTGTTCAAAT+TGG | 0.227837 | 6.3:+80467531 | MS.gene61373:intron |
| GGCACGGGAGTTTCTTCTTT+CGG | 0.243543 | 6.3:+80468202 | MS.gene61373:CDS |
| TTCAAATAGAAAATGGGTTT+TGG | 0.249039 | 6.3:+80466782 | MS.gene61373:CDS |
| TATTGAACATTTGCTTGTTT+TGG | 0.252873 | 6.3:-80470112 | None:intergenic |
| GTGGAGAAATTTGAAGAAAA+AGG | 0.264686 | 6.3:+80466750 | MS.gene61373:CDS |
| GCCAGGCCATATATTTAATA+TGG | 0.280671 | 6.3:+80469189 | MS.gene61373:CDS |
| GTAGATTGTCTCGACAAATT+TGG | 0.283718 | 6.3:+80469111 | MS.gene61373:intron |
| CCACGGATGCGAGTCGTTAA+AGG | 0.285650 | 6.3:+80470176 | MS.gene61373:CDS |
| CACCGTCCATATTAAATATA+TGG | 0.295272 | 6.3:-80469195 | None:intergenic |
| AACTTGGTTATATTGACATT+TGG | 0.298895 | 6.3:+80468527 | MS.gene61373:CDS |
| AATTCTTCATCTGGGGTGTT+TGG | 0.300534 | 6.3:+80466643 | MS.gene61373:CDS |
| AACAATGCTGGAACAAATAA+AGG | 0.317086 | 6.3:+80468881 | MS.gene61373:CDS |
| GGTAGCTCAAATTCTTCATC+TGG | 0.318654 | 6.3:+80466634 | MS.gene61373:CDS |
| AGTATAGACAAGCTGTTGTT+AGG | 0.324288 | 6.3:+80466863 | MS.gene61373:CDS |
| CCACGTAATGTTGTCATAAC+TGG | 0.334142 | 6.3:+80467896 | MS.gene61373:CDS |
| CTTTCTCAAGCAAAAGTTGT+AGG | 0.337639 | 6.3:+80468442 | MS.gene61373:CDS |
| AAGCAGACCGACTTAGAAAC+TGG | 0.348050 | 6.3:+80470860 | MS.gene61373:CDS |
| ACTTGGTTATATTGACATTT+GGG | 0.349608 | 6.3:+80468528 | MS.gene61373:CDS |
| GGTTGATGAAGTTCTATCTA+AGG | 0.354535 | 6.3:+80466885 | MS.gene61373:CDS |
| TCATAATACGCATGGCTTCT+CGG | 0.361034 | 6.3:-80469153 | None:intergenic |
| AATAAACATAAGCTAAGAAA+TGG | 0.370948 | 6.3:+80466607 | MS.gene61373:CDS |
| ATATATGGCCTGGCTTGGTT+TGG | 0.372350 | 6.3:-80469180 | None:intergenic |
| AATATGGACGGTGCAGGTTC+CGG | 0.376327 | 6.3:+80469205 | MS.gene61373:CDS |
| GTGATCCATGAAATTGTCTA+AGG | 0.376708 | 6.3:-80469778 | None:intergenic |
| TCCTAGAATCTTGCTTGCCT+TGG | 0.382251 | 6.3:+80470229 | MS.gene61373:CDS |
| AACTTTGCGGTCAGCGAACT+TGG | 0.384243 | 6.3:+80468511 | MS.gene61373:CDS |
| TGCGGCCTTAGACAATTTCA+TGG | 0.401293 | 6.3:+80469773 | MS.gene61373:CDS |
| CATAATACGCATGGCTTCTC+GGG | 0.402644 | 6.3:-80469152 | None:intergenic |
| GTCAGATGGATGCACTGATA+TGG | 0.403741 | 6.3:+80467795 | MS.gene61373:CDS |
| ATCAGAGGATATTATGTTCC+AGG | 0.405073 | 6.3:-80471012 | None:intergenic |
| GTGTGCAGTACAAGGGGATT+GGG | 0.408179 | 6.3:+80468170 | MS.gene61373:intron |
| TGGCTTGGAGGAGTTATCAT+TGG | 0.408578 | 6.3:+80467824 | MS.gene61373:CDS |
| GGACAATGATAGGTGCTAAC+TGG | 0.410970 | 6.3:+80467846 | MS.gene61373:CDS |
| GTTTCTAAGTCGGTCTGCTT+CGG | 0.419711 | 6.3:-80470857 | None:intergenic |
| TGCTTGCCTTGGTCACTGCT+TGG | 0.422221 | 6.3:+80470240 | MS.gene61373:CDS |
| CATAAGCTAAGAAATGGATT+TGG | 0.422384 | 6.3:+80466613 | MS.gene61373:CDS |
| ACCAAGGCAAGCAAGATTCT+AGG | 0.424125 | 6.3:-80470230 | None:intergenic |
| CCTTGGTCACTGCTTGGTTA+CGG | 0.429312 | 6.3:+80470246 | MS.gene61373:CDS |
| CTTGGTTACGGCGAGGTCGC+TGG | 0.429812 | 6.3:+80470258 | MS.gene61373:CDS |
| GGCTTGGAGGAGTTATCATT+GGG | 0.441757 | 6.3:+80467825 | MS.gene61373:CDS |
| TGTGTGCAGTACAAGGGGAT+TGG | 0.447496 | 6.3:+80468169 | MS.gene61373:intron |
| TGAAACTTCAAATAGAAAAT+GGG | 0.449170 | 6.3:+80466776 | MS.gene61373:CDS |
| GTTATCATTGGGACAATGAT+AGG | 0.449531 | 6.3:+80467836 | MS.gene61373:CDS |
| TCAGAGATTGGCAAACTTTG+CGG | 0.451337 | 6.3:+80468498 | MS.gene61373:CDS |
| ATGCGAGTCGTTAAAGGAAC+TGG | 0.451935 | 6.3:+80470182 | MS.gene61373:CDS |
| ATTAAATATATGGCCTGGCT+TGG | 0.453619 | 6.3:-80469185 | None:intergenic |
| GTAGCTCAAATTCTTCATCT+GGG | 0.461951 | 6.3:+80466635 | MS.gene61373:CDS |
| ACAGTTGCTTGCACAGACTC+AGG | 0.464504 | 6.3:-80468355 | None:intergenic |
| GCAATCGGATTTCAGATGTC+AGG | 0.470609 | 6.3:+80467594 | MS.gene61373:CDS |
| TGAAGATGGTGGTGGTTTGA+AGG | 0.477115 | 6.3:+80466720 | MS.gene61373:CDS |
| GGCTAATGATGTTCAGAGAT+TGG | 0.478323 | 6.3:+80468486 | MS.gene61373:CDS |
| ATATGGTATAGTTGGCTTGG+AGG | 0.479095 | 6.3:+80467812 | MS.gene61373:CDS |
| GTATAGACAAGCTGTTGTTA+GGG | 0.482674 | 6.3:+80466864 | MS.gene61373:CDS |
| AGGAGGAGTCAAGTAATTGA+TGG | 0.484820 | 6.3:-80470210 | None:intergenic |
| AGCACTAGCAGCAATTTGCC+TGG | 0.492616 | 6.3:+80470994 | MS.gene61373:CDS |
| ATGAGAAACCAAACCAAGCC+AGG | 0.506303 | 6.3:+80469172 | MS.gene61373:CDS |
| ATATTTAATATGGACGGTGC+AGG | 0.507122 | 6.3:+80469199 | MS.gene61373:CDS |
| CTGATATGGTATAGTTGGCT+TGG | 0.508323 | 6.3:+80467809 | MS.gene61373:CDS |
| GAGTGCAAGCGATCGAAAGT+AGG | 0.517173 | 6.3:+80469809 | MS.gene61373:CDS |
| ACTGGTGTCATCCTTGCAAT+CGG | 0.519699 | 6.3:+80467579 | MS.gene61373:CDS |
| CCATGCCTGGAGATGCTGTA+TGG | 0.520734 | 6.3:-80469835 | None:intergenic |
| CAGTGACGAAGATATCAAAC+AGG | 0.521442 | 6.3:+80468925 | MS.gene61373:CDS |
| TCCATATTAAATATATGGCC+TGG | 0.522530 | 6.3:-80469190 | None:intergenic |
| CATTTCCATTGCATCGGTGA+AGG | 0.528155 | 6.3:-80470905 | None:intergenic |
| GGTTGTGTTTGAGAAAGTGT+AGG | 0.528230 | 6.3:+80466686 | MS.gene61373:CDS |
| GAAGGCATTGCCAATGCAGT+TGG | 0.529622 | 6.3:+80468403 | MS.gene61373:CDS |
| AGTTCTGTGAGAACCATGCC+TGG | 0.533618 | 6.3:-80469848 | None:intergenic |
| CAGAGGTGTGCTAGACCCTC+CGG | 0.534337 | 6.3:-80469224 | None:intergenic |
| CAAAGATGAACCAACTGCAT+TGG | 0.539792 | 6.3:-80468413 | None:intergenic |
| CAGTTGCTTGCACAGACTCA+GGG | 0.540725 | 6.3:-80468354 | None:intergenic |
| ATGCACTGATATGGTATAGT+TGG | 0.541778 | 6.3:+80467804 | MS.gene61373:CDS |
| GTTGTGTTTGAGAAAGTGTA+GGG | 0.541898 | 6.3:+80466687 | MS.gene61373:CDS |
| TGTTTATTCAAATTACACTC+TGG | 0.542244 | 6.3:-80466592 | None:intergenic |
| AAGGGGATTGGGCAAAGCAT+TGG | 0.542264 | 6.3:+80468181 | MS.gene61373:CDS |
| ACTCAACAGATAAACAATGC+TGG | 0.542977 | 6.3:+80468869 | MS.gene61373:intron |
| TGTGTACATTTCCATTGCAT+CGG | 0.543502 | 6.3:-80470911 | None:intergenic |
| TTTCGGCCCAGTTTCTAAGT+CGG | 0.543609 | 6.3:-80470867 | None:intergenic |
| ATTGGGCAAAGCATTGGCAC+GGG | 0.546103 | 6.3:+80468187 | MS.gene61373:CDS |
| GATTGGGCAAAGCATTGGCA+CGG | 0.551942 | 6.3:+80468186 | MS.gene61373:CDS |
| AGAGCTTGAGGAAAATCTAA+AGG | 0.554658 | 6.3:+80468381 | MS.gene61373:CDS |
| CATTGCTTGTGATGTTTGTG+AGG | 0.557227 | 6.3:+80468465 | MS.gene61373:CDS |
| TTGGTTTCTCATAATACGCA+TGG | 0.557467 | 6.3:-80469161 | None:intergenic |
| ATTTCATGGATCACTATTGA+CGG | 0.560581 | 6.3:+80469787 | MS.gene61373:CDS |
| GGTGTCCATACAGCATCTCC+AGG | 0.560814 | 6.3:+80469830 | MS.gene61373:CDS |
| AGGGCTTTCAAGAGTGAAGA+TGG | 0.562950 | 6.3:+80466706 | MS.gene61373:CDS |
| TTCAAGAGTGAAGATGGTGG+TGG | 0.565829 | 6.3:+80466712 | MS.gene61373:CDS |
| AGGTCGCTGGTTTGATGATG+AGG | 0.567807 | 6.3:+80470271 | MS.gene61373:CDS |
| GGCCATATATTTAATATGGA+CGG | 0.568928 | 6.3:+80469193 | MS.gene61373:CDS |
| CCTTTAACGACTCGCATCCG+TGG | 0.571537 | 6.3:-80470176 | None:intergenic |
| ATGGACGGTGCAGGTTCCGG+AGG | 0.575972 | 6.3:+80469208 | MS.gene61373:CDS |
| TTGGAAGATTATTGTCGCGA+AGG | 0.583547 | 6.3:+80467872 | MS.gene61373:CDS |
| GACAATGATAGGTGCTAACT+GGG | 0.586174 | 6.3:+80467847 | MS.gene61373:CDS |
| ATTGTCTCGACAAATTTGGT+AGG | 0.586834 | 6.3:+80469115 | MS.gene61373:CDS |
| ACATCTGAAATCCGATTGCA+AGG | 0.586984 | 6.3:-80467590 | None:intergenic |
| CTTGAGGAAAATCTAAAGGA+AGG | 0.588050 | 6.3:+80468385 | MS.gene61373:CDS |
| GATAGGTGCTAACTGGGTGT+TGG | 0.588306 | 6.3:+80467853 | MS.gene61373:CDS |
| TCGTCACTGAATTGAAGCAA+TGG | 0.589388 | 6.3:-80468911 | None:intergenic |
| CCAGTTATGACAACATTACG+TGG | 0.591242 | 6.3:-80467896 | None:intergenic |
| TAGCTCAAATTCTTCATCTG+GGG | 0.599158 | 6.3:+80466636 | MS.gene61373:CDS |
| AGCAACTGTCAAAGAGCTTG+AGG | 0.600648 | 6.3:+80468369 | MS.gene61373:CDS |
| TTGCTAGAACATTAGTTCCA+CGG | 0.600648 | 6.3:+80470159 | MS.gene61373:CDS |
| TGAAGGTGGAGATAGTCAGA+TGG | 0.600721 | 6.3:+80467781 | MS.gene61373:intron |
| ACTGGGCCGAAAACCGCGCA+CGG | 0.603743 | 6.3:+80470878 | MS.gene61373:CDS |
| CCATACAGCATCTCCAGGCA+TGG | 0.604098 | 6.3:+80469835 | MS.gene61373:CDS |
| GCATGGCTTCTCGGGTACAA+AGG | 0.608231 | 6.3:-80469144 | None:intergenic |
| GATGACACCAGTGCTCATCA+TGG | 0.614134 | 6.3:-80467568 | None:intergenic |
| AGCTATGGTTCTACAAAATG+CGG | 0.627231 | 6.3:+80469755 | MS.gene61373:intron |
| ATTGTGACCATGATGAGCAC+TGG | 0.627363 | 6.3:+80467561 | MS.gene61373:CDS |
| AATACTCACACGGCTGTCAG+AGG | 0.628482 | 6.3:-80469241 | None:intergenic |
| CGGTGAAGGAAAACCGTGCG+CGG | 0.632870 | 6.3:-80470891 | None:intergenic |
| GTCACTGCTTGGTTACGGCG+AGG | 0.648939 | 6.3:+80470251 | MS.gene61373:CDS |
| AGTCGTTAAAGGAACTGGCA+AGG | 0.653271 | 6.3:+80470187 | MS.gene61373:CDS |
| AGCAGACCGACTTAGAAACT+GGG | 0.653481 | 6.3:+80470861 | MS.gene61373:CDS |
| GTAATGTTGTCATAACTGGA+AGG | 0.653698 | 6.3:+80467900 | MS.gene61373:CDS |
| TGGACGGTGCAGGTTCCGGA+GGG | 0.657750 | 6.3:+80469209 | MS.gene61373:CDS |
| CCGTAACCAAGCAGTGACCA+AGG | 0.660846 | 6.3:-80470246 | None:intergenic |
| AAATGTACACAGAGAACACA+TGG | 0.664446 | 6.3:+80470923 | MS.gene61373:CDS |
| GTGTAATTGTTACTTCACGA+AGG | 0.670168 | 6.3:+80468231 | MS.gene61373:CDS |
| AAGGCAAGCAAGATTCTAGG+AGG | 0.670870 | 6.3:-80470227 | None:intergenic |
| GCTTTCAAGAGTGAAGATGG+TGG | 0.735744 | 6.3:+80466709 | MS.gene61373:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAATTGAAAATAGCATA+TGG | + | chr6.3:80467319-80467338 | MS.gene61373:intron | 15.0% |
| !! | TATTCGTTATAAGATTAAAA+AGG | - | chr6.3:80469996-80470015 | None:intergenic | 15.0% |
| !! | TTATGTATAAGATATTTGTT+AGG | + | chr6.3:80467000-80467019 | MS.gene61373:intron | 15.0% |
| !! | TTTAATAATTCTTAGAAATG+TGG | + | chr6.3:80470065-80470084 | MS.gene61373:intron | 15.0% |
| !!! | AATTTTAGAAATGTTTTGTT+GGG | + | chr6.3:80466808-80466827 | MS.gene61373:CDS | 15.0% |
| !!! | ATCATTTTTTTTAATCTGTT+TGG | + | chr6.3:80466931-80466950 | MS.gene61373:intron | 15.0% |
| !!! | CTTATTTTCATATGTTATAT+TGG | + | chr6.3:80467177-80467196 | MS.gene61373:intron | 15.0% |
| !!! | GTAATTTTTAAAAATAGAAG+TGG | + | chr6.3:80470778-80470797 | MS.gene61373:intron | 15.0% |
| !!! | TAATTTTAGAAATGTTTTGT+TGG | + | chr6.3:80466807-80466826 | MS.gene61373:CDS | 15.0% |
| !!! | TATGTATAAGATATTTGTTA+GGG | + | chr6.3:80467001-80467020 | MS.gene61373:intron | 15.0% |
| !!! | TTTATTTTGTTGAAACATAA+AGG | + | chr6.3:80468970-80468989 | MS.gene61373:intron | 15.0% |
| !! | AAAAGGAAATAACATTACAA+GGG | - | chr6.3:80467465-80467484 | None:intergenic | 20.0% |
| !! | AATAAACATAAGCTAAGAAA+TGG | + | chr6.3:80466607-80466626 | MS.gene61373:CDS | 20.0% |
| !! | ACAACATGAAAAATTAGATT+AGG | - | chr6.3:80468834-80468853 | None:intergenic | 20.0% |
| !! | CAAAAACAAGGAAAAAAATT+TGG | - | chr6.3:80469469-80469488 | None:intergenic | 20.0% |
| !! | CAATAAACATGATTGATTAT+TGG | + | chr6.3:80469368-80469387 | MS.gene61373:intron | 20.0% |
| !! | GAAACTTAAAAATAACTGAA+GGG | + | chr6.3:80470671-80470690 | MS.gene61373:intron | 20.0% |
| !! | TAACTTAAGAAAACAAGTTA+TGG | - | chr6.3:80467262-80467281 | None:intergenic | 20.0% |
| !! | TAGATGTAATCAACTTTAAT+CGG | - | chr6.3:80468108-80468127 | None:intergenic | 20.0% |
| !! | TCATCTTTGAATATAGAATT+AGG | + | chr6.3:80470365-80470384 | MS.gene61373:intron | 20.0% |
| !! | TGAAACTTAAAAATAACTGA+AGG | + | chr6.3:80470670-80470689 | MS.gene61373:intron | 20.0% |
| !! | TGAAACTTCAAATAGAAAAT+GGG | + | chr6.3:80466776-80466795 | MS.gene61373:CDS | 20.0% |
| !! | TGAAAGAAAACTTAACTTAA+CGG | - | chr6.3:80468996-80469015 | None:intergenic | 20.0% |
| !!! | AAAAACAACTTTTCAAGTTA+AGG | - | chr6.3:80469082-80469101 | None:intergenic | 20.0% |
| !!! | AGAATTCATTTTCAAAAACA+AGG | - | chr6.3:80469481-80469500 | None:intergenic | 20.0% |
| !!! | ATATGTGATGTTGATTTTTT+TGG | + | chr6.3:80467750-80467769 | MS.gene61373:intron | 20.0% |
| !!! | ATCGATTTCTAGAATATTAT+CGG | - | chr6.3:80467938-80467957 | None:intergenic | 20.0% |
| !!! | ATTTTAGAAATGTTTTGTTG+GGG | + | chr6.3:80466809-80466828 | MS.gene61373:CDS | 20.0% |
| !!! | ATTTTGGTTGGAAAAATTTA+TGG | - | chr6.3:80467387-80467406 | None:intergenic | 20.0% |
| !!! | CTTCAATGAAAGTTTTATAT+TGG | + | chr6.3:80468768-80468787 | MS.gene61373:intron | 20.0% |
| !!! | GTTATTTTTAAGTTTCACTT+TGG | - | chr6.3:80470667-80470686 | None:intergenic | 20.0% |
| !!! | TTTTAGCATATAAGTACTTA+TGG | + | chr6.3:80467107-80467126 | MS.gene61373:intron | 20.0% |
| !!! | TTTTTTTGGAAATTTTGTGA+AGG | + | chr6.3:80467764-80467783 | MS.gene61373:intron | 20.0% |
| ! | AACTTGGTTATATTGACATT+TGG | + | chr6.3:80468527-80468546 | MS.gene61373:CDS | 25.0% |
| ! | ACTTGGTTATATTGACATTT+GGG | + | chr6.3:80468528-80468547 | MS.gene61373:CDS | 25.0% |
| ! | CAAAAGGAAATAACATTACA+AGG | - | chr6.3:80467466-80467485 | None:intergenic | 25.0% |
| ! | CATCAAAAAGCAAAAAATGT+TGG | - | chr6.3:80467963-80467982 | None:intergenic | 25.0% |
| ! | GTCTGATATTTGTAACTTAA+GGG | - | chr6.3:80470497-80470516 | None:intergenic | 25.0% |
| ! | GTGAAACTTCAAATAGAAAA+TGG | + | chr6.3:80466775-80466794 | MS.gene61373:CDS | 25.0% |
| ! | TGTCTGATATTTGTAACTTA+AGG | - | chr6.3:80470498-80470517 | None:intergenic | 25.0% |
| ! | TGTTTATTCAAATTACACTC+TGG | - | chr6.3:80466595-80466614 | None:intergenic | 25.0% |
| !! | AAACTTGTTTGCATTATTGT+CGG | - | chr6.3:80467688-80467707 | None:intergenic | 25.0% |
| !! | AATAAGCTGAAAACAACTTT+TGG | + | chr6.3:80467343-80467362 | MS.gene61373:intron | 25.0% |
| !! | ATTAGGCTAAATTACACTTT+TGG | + | chr6.3:80470382-80470401 | MS.gene61373:intron | 25.0% |
| !! | CGATAACAAAATTGATAGTA+GGG | - | chr6.3:80468748-80468767 | None:intergenic | 25.0% |
| !! | TATTGAACATTTGCTTGTTT+TGG | - | chr6.3:80470115-80470134 | None:intergenic | 25.0% |
| !!! | TTCAAATAGAAAATGGGTTT+TGG | + | chr6.3:80466782-80466801 | MS.gene61373:CDS | 25.0% |
| !!! | TTTGGTTTTGGACAAAATTT+TGG | + | chr6.3:80466661-80466680 | MS.gene61373:CDS | 25.0% |
| !!! | TTTTTTGCACATTAGCATAA+AGG | + | chr6.3:80468703-80468722 | MS.gene61373:intron | 25.0% |
| AAAGGAAATTGTTGTGCTAA+TGG | + | chr6.3:80468721-80468740 | MS.gene61373:intron | 30.0% | |
| AACAATGCTGGAACAAATAA+AGG | + | chr6.3:80468881-80468900 | MS.gene61373:CDS | 30.0% | |
| AACAGTAGTTTCTTATCGAA+TGG | + | chr6.3:80469272-80469291 | MS.gene61373:intron | 30.0% | |
| AAGAGTTATATGCATGTTTC+AGG | + | chr6.3:80470816-80470835 | MS.gene61373:intron | 30.0% | |
| ACACAAAAGGACTAAAATGA+AGG | - | chr6.3:80470423-80470442 | None:intergenic | 30.0% | |
| ACAGTAGTTTCTTATCGAAT+GGG | + | chr6.3:80469273-80469292 | MS.gene61373:intron | 30.0% | |
| ACCAAGTAATTAAAGTGTAC+TGG | - | chr6.3:80470327-80470346 | None:intergenic | 30.0% | |
| ACCAGTACACTTTAATTACT+TGG | + | chr6.3:80470323-80470342 | MS.gene61373:intron | 30.0% | |
| ACTGTAAACAACATGATAGA+AGG | - | chr6.3:80469554-80469573 | None:intergenic | 30.0% | |
| AGAGTTATATGCATGTTTCA+GGG | + | chr6.3:80470817-80470836 | MS.gene61373:intron | 30.0% | |
| ATATGTGATAGAGAGAAGAT+AGG | - | chr6.3:80469517-80469536 | None:intergenic | 30.0% | |
| ATCATTCTTGATTCTCTGTT+TGG | + | chr6.3:80467063-80467082 | MS.gene61373:intron | 30.0% | |
| ATGAAACCAACAAATGTCAA+TGG | - | chr6.3:80470468-80470487 | None:intergenic | 30.0% | |
| ATTCCTACACAAGAAAATTC+TGG | - | chr6.3:80469931-80469950 | None:intergenic | 30.0% | |
| ATTTCATGGATCACTATTGA+CGG | + | chr6.3:80469787-80469806 | MS.gene61373:CDS | 30.0% | |
| CACCGTCCATATTAAATATA+TGG | - | chr6.3:80469198-80469217 | None:intergenic | 30.0% | |
| CCCTAAAGTTAAATAAAGCT+CGG | - | chr6.3:80469317-80469336 | None:intergenic | 30.0% | |
| GGATTAACAACTTAATTGAG+TGG | + | chr6.3:80467084-80467103 | MS.gene61373:intron | 30.0% | |
| GGCCATATATTTAATATGGA+CGG | + | chr6.3:80469193-80469212 | MS.gene61373:CDS | 30.0% | |
| GTGGAGAAATTTGAAGAAAA+AGG | + | chr6.3:80466750-80466769 | MS.gene61373:CDS | 30.0% | |
| TAAAGTTAAATAAAGCTCGG+TGG | - | chr6.3:80469314-80469333 | None:intergenic | 30.0% | |
| TACAACATCTCATTCTTAGA+CGG | - | chr6.3:80469021-80469040 | None:intergenic | 30.0% | |
| TAGCTACACAAGAAATGAAA+AGG | - | chr6.3:80469740-80469759 | None:intergenic | 30.0% | |
| TCAAATAAGCAAATCCGAAA+AGG | + | chr6.3:80467439-80467458 | MS.gene61373:intron | 30.0% | |
| TCCATATTAAATATATGGCC+TGG | - | chr6.3:80469193-80469212 | None:intergenic | 30.0% | |
| TGAAACCAACAAATGTCAAT+GGG | - | chr6.3:80470467-80470486 | None:intergenic | 30.0% | |
| TTTCATTTCTTGTGTAGCTA+TGG | + | chr6.3:80469740-80469759 | MS.gene61373:intron | 30.0% | |
| ! | AAATTTTGTGTGCAGTACAA+GGG | + | chr6.3:80468163-80468182 | MS.gene61373:intron | 30.0% |
| ! | AACAAGATTGCTGTTCAAAT+TGG | + | chr6.3:80467531-80467550 | MS.gene61373:intron | 30.0% |
| ! | AAGCACTTATGAGACTATTT+TGG | - | chr6.3:80467403-80467422 | None:intergenic | 30.0% |
| ! | AGTAGCCTAAATTTCACTTT+TGG | - | chr6.3:80470698-80470717 | None:intergenic | 30.0% |
| ! | ATGTAATGGCGATAATTTTG+AGG | + | chr6.3:80470295-80470314 | MS.gene61373:intron | 30.0% |
| ! | CATAAGCTAAGAAATGGATT+TGG | + | chr6.3:80466613-80466632 | MS.gene61373:CDS | 30.0% |
| ! | GCGATAACAAAATTGATAGT+AGG | - | chr6.3:80468749-80468768 | None:intergenic | 30.0% |
| ! | TAAATTTTGTGTGCAGTACA+AGG | + | chr6.3:80468162-80468181 | MS.gene61373:intron | 30.0% |
| ! | TTCTCACAGAACTTCTTTTA+AGG | + | chr6.3:80469858-80469877 | MS.gene61373:CDS | 30.0% |
| ! | TTTCCAGAATTTTCTTGTGT+AGG | + | chr6.3:80469925-80469944 | MS.gene61373:intron | 30.0% |
| !! | ACCGAGCTTTATTTAACTTT+AGG | + | chr6.3:80469313-80469332 | MS.gene61373:intron | 30.0% |
| !! | CCGAGCTTTATTTAACTTTA+GGG | + | chr6.3:80469314-80469333 | MS.gene61373:intron | 30.0% |
| !! | GTTTTGGACAAAATTTTGGT+GGG | + | chr6.3:80466665-80466684 | MS.gene61373:CDS | 30.0% |
| !! | TGTTTTGTTGGGGAATTTTA+TGG | + | chr6.3:80466819-80466838 | MS.gene61373:CDS | 30.0% |
| !! | TTTGATGATGAGGTATGTAA+TGG | + | chr6.3:80470281-80470300 | MS.gene61373:intron | 30.0% |
| !! | TTTTGGAAATTTTGTGAAGG+TGG | + | chr6.3:80467767-80467786 | MS.gene61373:intron | 30.0% |
| !!! | AAACGTTTTGTTTTTTCGTG+TGG | + | chr6.3:80469897-80469916 | MS.gene61373:intron | 30.0% |
| !!! | ACTTATGAGACTATTTTGGT+TGG | - | chr6.3:80467399-80467418 | None:intergenic | 30.0% |
| !!! | TTCTGTCTTCTTTTTGAGTT+AGG | - | chr6.3:80470606-80470625 | None:intergenic | 30.0% |
| AAATGTACACAGAGAACACA+TGG | + | chr6.3:80470923-80470942 | MS.gene61373:CDS | 35.0% | |
| AACACTCAATACAGCACAAA+AGG | - | chr6.3:80467482-80467501 | None:intergenic | 35.0% | |
| AATGTTCTAGCAACAGTTTC+AGG | - | chr6.3:80470152-80470171 | None:intergenic | 35.0% | |
| ACCAACGTTTGTAACACAAA+AGG | - | chr6.3:80470436-80470455 | None:intergenic | 35.0% | |
| ACTCAACAGATAAACAATGC+TGG | + | chr6.3:80468869-80468888 | MS.gene61373:intron | 35.0% | |
| ACTTTAGCATAACATGAGTG+TGG | + | chr6.3:80468680-80468699 | MS.gene61373:intron | 35.0% | |
| AGAGCTTGAGGAAAATCTAA+AGG | + | chr6.3:80468381-80468400 | MS.gene61373:CDS | 35.0% | |
| AGGGACCAAAAGTGAAATTT+AGG | + | chr6.3:80470690-80470709 | MS.gene61373:intron | 35.0% | |
| AGTATAGACAAGCTGTTGTT+AGG | + | chr6.3:80466863-80466882 | MS.gene61373:CDS | 35.0% | |
| ATATTTAATATGGACGGTGC+AGG | + | chr6.3:80469199-80469218 | MS.gene61373:CDS | 35.0% | |
| ATTAAATATATGGCCTGGCT+TGG | - | chr6.3:80469188-80469207 | None:intergenic | 35.0% | |
| ATTGTCTCGACAAATTTGGT+AGG | + | chr6.3:80469115-80469134 | MS.gene61373:CDS | 35.0% | |
| CCTTCACAAAATTTGAGAGT+GGG | - | chr6.3:80468331-80468350 | None:intergenic | 35.0% | |
| CTTGAGGAAAATCTAAAGGA+AGG | + | chr6.3:80468385-80468404 | MS.gene61373:CDS | 35.0% | |
| CTTTCTCAAGCAAAAGTTGT+AGG | + | chr6.3:80468442-80468461 | MS.gene61373:CDS | 35.0% | |
| GCCAGGCCATATATTTAATA+TGG | + | chr6.3:80469189-80469208 | MS.gene61373:CDS | 35.0% | |
| GTAATGTTGTCATAACTGGA+AGG | + | chr6.3:80467900-80467919 | MS.gene61373:CDS | 35.0% | |
| GTAGATTGTCTCGACAAATT+TGG | + | chr6.3:80469111-80469130 | MS.gene61373:intron | 35.0% | |
| GTAGCTCAAATTCTTCATCT+GGG | + | chr6.3:80466635-80466654 | MS.gene61373:CDS | 35.0% | |
| GTATAGACAAGCTGTTGTTA+GGG | + | chr6.3:80466864-80466883 | MS.gene61373:CDS | 35.0% | |
| GTGATCCATGAAATTGTCTA+AGG | - | chr6.3:80469781-80469800 | None:intergenic | 35.0% | |
| GTTATCATTGGGACAATGAT+AGG | + | chr6.3:80467836-80467855 | MS.gene61373:CDS | 35.0% | |
| TAGCTCAAATTCTTCATCTG+GGG | + | chr6.3:80466636-80466655 | MS.gene61373:CDS | 35.0% | |
| TATCTACACGATTATCTACG+TGG | + | chr6.3:80468030-80468049 | MS.gene61373:intron | 35.0% | |
| TATTGACATTTGGGTAAGTG+TGG | + | chr6.3:80468537-80468556 | MS.gene61373:intron | 35.0% | |
| TCAACATCACATATGATACG+AGG | - | chr6.3:80467744-80467763 | None:intergenic | 35.0% | |
| TGAGTGTTCTTCAAAAGTCA+TGG | + | chr6.3:80469682-80469701 | MS.gene61373:intron | 35.0% | |
| TGTGTACATTTCCATTGCAT+CGG | - | chr6.3:80470914-80470933 | None:intergenic | 35.0% | |
| TTGACGACAGAAAAAGAAGT+TGG | - | chr6.3:80469956-80469975 | None:intergenic | 35.0% | |
| TTGCTAGAACATTAGTTCCA+CGG | + | chr6.3:80470159-80470178 | MS.gene61373:CDS | 35.0% | |
| TTGGTTTCTCATAATACGCA+TGG | - | chr6.3:80469164-80469183 | None:intergenic | 35.0% | |
| TTGTCAAGAGAATACTCACA+CGG | - | chr6.3:80469254-80469273 | None:intergenic | 35.0% | |
| ! | AATTTTGTGTGCAGTACAAG+GGG | + | chr6.3:80468164-80468183 | MS.gene61373:intron | 35.0% |
| ! | AGCTATGGTTCTACAAAATG+CGG | + | chr6.3:80469755-80469774 | MS.gene61373:intron | 35.0% |
| ! | ATGCACTGATATGGTATAGT+TGG | + | chr6.3:80467804-80467823 | MS.gene61373:CDS | 35.0% |
| ! | CACAAGAAAATTCTGGAAAG+CGG | - | chr6.3:80469924-80469943 | None:intergenic | 35.0% |
| ! | GTGTAATTGTTACTTCACGA+AGG | + | chr6.3:80468231-80468250 | MS.gene61373:CDS | 35.0% |
| ! | GTTGTGTTTGAGAAAGTGTA+GGG | + | chr6.3:80466687-80466706 | MS.gene61373:CDS | 35.0% |
| ! | TAACATTACAAGGGCCTTTT+CGG | - | chr6.3:80467456-80467475 | None:intergenic | 35.0% |
| ! | TAATTGTTACTTCACGAAGG+TGG | + | chr6.3:80468234-80468253 | MS.gene61373:intron | 35.0% |
| ! | TACTACATAGAAGAGTGCAT+AGG | - | chr6.3:80467988-80468007 | None:intergenic | 35.0% |
| ! | TCCTTTTGTGTTACAAACGT+TGG | + | chr6.3:80470432-80470451 | MS.gene61373:intron | 35.0% |
| ! | TTGTTGGGGAATTTTATGGT+GGG | + | chr6.3:80466823-80466842 | MS.gene61373:CDS | 35.0% |
| ! | TTTGTTGGGGAATTTTATGG+TGG | + | chr6.3:80466822-80466841 | MS.gene61373:CDS | 35.0% |
| !! | GATATTTGTTAGGGTTGATG+AGG | + | chr6.3:80467010-80467029 | MS.gene61373:intron | 35.0% |
| !! | GGTTGATGAAGTTCTATCTA+AGG | + | chr6.3:80466885-80466904 | MS.gene61373:CDS | 35.0% |
| !!! | AAATGTGGCTTTTTTTGCAG+TGG | + | chr6.3:80470080-80470099 | MS.gene61373:intron | 35.0% |
| !!! | GGTTTTGGACAAAATTTTGG+TGG | + | chr6.3:80466664-80466683 | MS.gene61373:CDS | 35.0% |
| !!! | TTTTATGGTGGGTTCTAAGT+TGG | + | chr6.3:80466834-80466853 | MS.gene61373:CDS | 35.0% |
| AACATGATAGAAGGCTCATG+TGG | - | chr6.3:80469545-80469564 | None:intergenic | 40.0% | |
| ACCACACTCAGCAAGAAATA+AGG | - | chr6.3:80468797-80468816 | None:intergenic | 40.0% | |
| AGAAGATAGGAGGATAGTTG+GGG | - | chr6.3:80469504-80469523 | None:intergenic | 40.0% | |
| AGAGAAGATAGGAGGATAGT+TGG | - | chr6.3:80469506-80469525 | None:intergenic | 40.0% | |
| AGGAAGTAAGCATCATCATC+AGG | - | chr6.3:80469720-80469739 | None:intergenic | 40.0% | |
| AGGAGGAGTCAAGTAATTGA+TGG | - | chr6.3:80470213-80470232 | None:intergenic | 40.0% | |
| CAAAGATGAACCAACTGCAT+TGG | - | chr6.3:80468416-80468435 | None:intergenic | 40.0% | |
| CAACAAGATACTGACACATG+TGG | + | chr6.3:80468645-80468664 | MS.gene61373:intron | 40.0% | |
| CACATGTGTCAGTATCTTGT+TGG | - | chr6.3:80468647-80468666 | None:intergenic | 40.0% | |
| CAGTGACGAAGATATCAAAC+AGG | + | chr6.3:80468925-80468944 | MS.gene61373:CDS | 40.0% | |
| CATTCAATCTCAAGTGTCAG+TGG | - | chr6.3:80468589-80468608 | None:intergenic | 40.0% | |
| CATTGCTTGTGATGTTTGTG+AGG | + | chr6.3:80468465-80468484 | MS.gene61373:CDS | 40.0% | |
| CCACGTAATGTTGTCATAAC+TGG | + | chr6.3:80467896-80467915 | MS.gene61373:CDS | 40.0% | |
| CCAGTTATGACAACATTACG+TGG | - | chr6.3:80467899-80467918 | None:intergenic | 40.0% | |
| CTGATATGGTATAGTTGGCT+TGG | + | chr6.3:80467809-80467828 | MS.gene61373:CDS | 40.0% | |
| GACAATGATAGGTGCTAACT+GGG | + | chr6.3:80467847-80467866 | MS.gene61373:CDS | 40.0% | |
| GAGAAGATAGGAGGATAGTT+GGG | - | chr6.3:80469505-80469524 | None:intergenic | 40.0% | |
| GCCTTCACAAAATTTGAGAG+TGG | - | chr6.3:80468332-80468351 | None:intergenic | 40.0% | |
| GGCTAATGATGTTCAGAGAT+TGG | + | chr6.3:80468486-80468505 | MS.gene61373:CDS | 40.0% | |
| GGTAGCTCAAATTCTTCATC+TGG | + | chr6.3:80466634-80466653 | MS.gene61373:CDS | 40.0% | |
| GTAGTTTCTTATCGAATGGG+AGG | + | chr6.3:80469276-80469295 | MS.gene61373:intron | 40.0% | |
| GTGGTTTGAAGGAGAAAAAG+TGG | + | chr6.3:80466731-80466750 | MS.gene61373:CDS | 40.0% | |
| GTGTTCTTCAAAAGTCATGG+CGG | + | chr6.3:80469685-80469704 | MS.gene61373:intron | 40.0% | |
| GTTACAAACGTTGGTCACTT+TGG | + | chr6.3:80470441-80470460 | MS.gene61373:intron | 40.0% | |
| TCAGAGATTGGCAAACTTTG+CGG | + | chr6.3:80468498-80468517 | MS.gene61373:CDS | 40.0% | |
| TCATAATACGCATGGCTTCT+CGG | - | chr6.3:80469156-80469175 | None:intergenic | 40.0% | |
| TCGTCACTGAATTGAAGCAA+TGG | - | chr6.3:80468914-80468933 | None:intergenic | 40.0% | |
| TGTGATAGAGAGAAGATAGG+AGG | - | chr6.3:80469514-80469533 | None:intergenic | 40.0% | |
| TTACCTATGAATCACCGACA+CGG | + | chr6.3:80470720-80470739 | MS.gene61373:intron | 40.0% | |
| TTGGAAGATTATTGTCGCGA+AGG | + | chr6.3:80467872-80467891 | MS.gene61373:CDS | 40.0% | |
| TTTGGCCCATTGACATTTGT+TGG | + | chr6.3:80470459-80470478 | MS.gene61373:intron | 40.0% | |
| ! | AATTCTTCATCTGGGGTGTT+TGG | + | chr6.3:80466643-80466662 | MS.gene61373:CDS | 40.0% |
| ! | ACATATGATACGAGGCATCT+TGG | - | chr6.3:80467736-80467755 | None:intergenic | 40.0% |
| ! | ACATCTGAAATCCGATTGCA+AGG | - | chr6.3:80467593-80467612 | None:intergenic | 40.0% |
| ! | CCCACTCTCAAATTTTGTGA+AGG | + | chr6.3:80468328-80468347 | MS.gene61373:intron | 40.0% |
| ! | GGTTGTGTTTGAGAAAGTGT+AGG | + | chr6.3:80466686-80466705 | MS.gene61373:CDS | 40.0% |
| ! | TCATACGCGGCATTATGTTT+TGG | + | chr6.3:80470563-80470582 | MS.gene61373:intron | 40.0% |
| ! | TCCTTATTTCTTGCTGAGTG+TGG | + | chr6.3:80468793-80468812 | MS.gene61373:intron | 40.0% |
| !! | ATATGGTATAGTTGGCTTGG+AGG | + | chr6.3:80467812-80467831 | MS.gene61373:CDS | 40.0% |
| !! | TGAGTGTGGTTTCTGCTTTT+TGG | + | chr6.3:80468807-80468826 | MS.gene61373:intron | 40.0% |
| !! | TGTTTTGGACCTTGCTGATT+AGG | + | chr6.3:80470578-80470597 | MS.gene61373:intron | 40.0% |
| AAGGCAAGCAAGATTCTAGG+AGG | - | chr6.3:80470230-80470249 | None:intergenic | 45.0% | |
| ACCAAGGCAAGCAAGATTCT+AGG | - | chr6.3:80470233-80470252 | None:intergenic | 45.0% | |
| AGCAACTGTCAAAGAGCTTG+AGG | + | chr6.3:80468369-80468388 | MS.gene61373:CDS | 45.0% | |
| AGGGCTTTCAAGAGTGAAGA+TGG | + | chr6.3:80466706-80466725 | MS.gene61373:CDS | 45.0% | |
| AGTCGTTAAAGGAACTGGCA+AGG | + | chr6.3:80470187-80470206 | MS.gene61373:CDS | 45.0% | |
| ATGAGAAACCAAACCAAGCC+AGG | + | chr6.3:80469172-80469191 | MS.gene61373:CDS | 45.0% | |
| ATGCGAGTCGTTAAAGGAAC+TGG | + | chr6.3:80470182-80470201 | MS.gene61373:CDS | 45.0% | |
| ATTGTGACCATGATGAGCAC+TGG | + | chr6.3:80467561-80467580 | MS.gene61373:CDS | 45.0% | |
| CATAATACGCATGGCTTCTC+GGG | - | chr6.3:80469155-80469174 | None:intergenic | 45.0% | |
| CTTTGACACTTGACACGTGT+CGG | + | chr6.3:80468612-80468631 | MS.gene61373:intron | 45.0% | |
| GCAATCGGATTTCAGATGTC+AGG | + | chr6.3:80467594-80467613 | MS.gene61373:CDS | 45.0% | |
| GCTTTCAAGAGTGAAGATGG+TGG | + | chr6.3:80466709-80466728 | MS.gene61373:CDS | 45.0% | |
| GGACAATGATAGGTGCTAAC+TGG | + | chr6.3:80467846-80467865 | MS.gene61373:CDS | 45.0% | |
| GGCTTGGAGGAGTTATCATT+GGG | + | chr6.3:80467825-80467844 | MS.gene61373:CDS | 45.0% | |
| GTTTCTAAGTCGGTCTGCTT+CGG | - | chr6.3:80470860-80470879 | None:intergenic | 45.0% | |
| TCCTAGAATCTTGCTTGCCT+TGG | + | chr6.3:80470229-80470248 | MS.gene61373:CDS | 45.0% | |
| TCGGATTTCAGATGTCAGGT+TGG | + | chr6.3:80467598-80467617 | MS.gene61373:intron | 45.0% | |
| TGAAGGTGGAGATAGTCAGA+TGG | + | chr6.3:80467781-80467800 | MS.gene61373:intron | 45.0% | |
| TGCGGCCTTAGACAATTTCA+TGG | + | chr6.3:80469773-80469792 | MS.gene61373:CDS | 45.0% | |
| TTTCGGCCCAGTTTCTAAGT+CGG | - | chr6.3:80470870-80470889 | None:intergenic | 45.0% | |
| ! | AAGCAGACCGACTTAGAAAC+TGG | + | chr6.3:80470860-80470879 | MS.gene61373:CDS | 45.0% |
| ! | AGCAGACCGACTTAGAAACT+GGG | + | chr6.3:80470861-80470880 | MS.gene61373:CDS | 45.0% |
| ! | CATTTCCATTGCATCGGTGA+AGG | - | chr6.3:80470908-80470927 | None:intergenic | 45.0% |
| ! | GTCAGATGGATGCACTGATA+TGG | + | chr6.3:80467795-80467814 | MS.gene61373:CDS | 45.0% |
| ! | GTTTTCCTTCACCGATGCAA+TGG | + | chr6.3:80470900-80470919 | MS.gene61373:CDS | 45.0% |
| ! | TGGCTTGGAGGAGTTATCAT+TGG | + | chr6.3:80467824-80467843 | MS.gene61373:CDS | 45.0% |
| ! | TTCAAGAGTGAAGATGGTGG+TGG | + | chr6.3:80466712-80466731 | MS.gene61373:CDS | 45.0% |
| !! | ACTGGTGTCATCCTTGCAAT+CGG | + | chr6.3:80467579-80467598 | MS.gene61373:CDS | 45.0% |
| !! | ATATATGGCCTGGCTTGGTT+TGG | - | chr6.3:80469183-80469202 | None:intergenic | 45.0% |
| !! | TCATCTGGGGTGTTTGGTTT+TGG | + | chr6.3:80466649-80466668 | MS.gene61373:CDS | 45.0% |
| !! | TGAAGATGGTGGTGGTTTGA+AGG | + | chr6.3:80466720-80466739 | MS.gene61373:CDS | 45.0% |
| AACTTTGCGGTCAGCGAACT+TGG | + | chr6.3:80468511-80468530 | MS.gene61373:CDS | 50.0% | |
| AAGGGGATTGGGCAAAGCAT+TGG | + | chr6.3:80468181-80468200 | MS.gene61373:CDS | 50.0% | |
| AATACTCACACGGCTGTCAG+AGG | - | chr6.3:80469244-80469263 | None:intergenic | 50.0% | |
| AATATGGACGGTGCAGGTTC+CGG | + | chr6.3:80469205-80469224 | MS.gene61373:CDS | 50.0% | |
| ACAGTTGCTTGCACAGACTC+AGG | - | chr6.3:80468358-80468377 | None:intergenic | 50.0% | |
| AGCACTAGCAGCAATTTGCC+TGG | + | chr6.3:80470994-80471013 | MS.gene61373:CDS | 50.0% | |
| AGTTAGGCGCCTAATCAGCA+AGG | - | chr6.3:80470590-80470609 | None:intergenic | 50.0% | |
| AGTTCTGTGAGAACCATGCC+TGG | - | chr6.3:80469851-80469870 | None:intergenic | 50.0% | |
| CAGTTGCTTGCACAGACTCA+GGG | - | chr6.3:80468357-80468376 | None:intergenic | 50.0% | |
| CCTTGGTCACTGCTTGGTTA+CGG | + | chr6.3:80470246-80470265 | MS.gene61373:CDS | 50.0% | |
| GAGTGCAAGCGATCGAAAGT+AGG | + | chr6.3:80469809-80469828 | MS.gene61373:CDS | 50.0% | |
| GATAGGTGCTAACTGGGTGT+TGG | + | chr6.3:80467853-80467872 | MS.gene61373:CDS | 50.0% | |
| GATGACACCAGTGCTCATCA+TGG | - | chr6.3:80467571-80467590 | None:intergenic | 50.0% | |
| GCACGGGAGTTTCTTCTTTC+GGG | + | chr6.3:80468203-80468222 | MS.gene61373:CDS | 50.0% | |
| GGCACGGGAGTTTCTTCTTT+CGG | + | chr6.3:80468202-80468221 | MS.gene61373:CDS | 50.0% | |
| GTGTGCAGTACAAGGGGATT+GGG | + | chr6.3:80468170-80468189 | MS.gene61373:intron | 50.0% | |
| TCTACGTGGTGCGCTGTATT+TGG | + | chr6.3:80468044-80468063 | MS.gene61373:intron | 50.0% | |
| TGTGTGCAGTACAAGGGGAT+TGG | + | chr6.3:80468169-80468188 | MS.gene61373:intron | 50.0% | |
| ! | TGTCCGTGTCGGTGATTCAT+AGG | - | chr6.3:80470726-80470745 | None:intergenic | 50.0% |
| !! | AGGTCGCTGGTTTGATGATG+AGG | + | chr6.3:80470271-80470290 | MS.gene61373:CDS | 50.0% |
| !! | ATTGGGCAAAGCATTGGCAC+GGG | + | chr6.3:80468187-80468206 | MS.gene61373:CDS | 50.0% |
| !! | GAAGGCATTGCCAATGCAGT+TGG | + | chr6.3:80468403-80468422 | MS.gene61373:CDS | 50.0% |
| !! | GATTGGGCAAAGCATTGGCA+CGG | + | chr6.3:80468186-80468205 | MS.gene61373:CDS | 50.0% |
| CCACGGATGCGAGTCGTTAA+AGG | + | chr6.3:80470176-80470195 | MS.gene61373:CDS | 55.0% | |
| CCATACAGCATCTCCAGGCA+TGG | + | chr6.3:80469835-80469854 | MS.gene61373:CDS | 55.0% | |
| CCATGCCTGGAGATGCTGTA+TGG | - | chr6.3:80469838-80469857 | None:intergenic | 55.0% | |
| CCGTAACCAAGCAGTGACCA+AGG | - | chr6.3:80470249-80470268 | None:intergenic | 55.0% | |
| CCTTTAACGACTCGCATCCG+TGG | - | chr6.3:80470179-80470198 | None:intergenic | 55.0% | |
| GCATGGCTTCTCGGGTACAA+AGG | - | chr6.3:80469147-80469166 | None:intergenic | 55.0% | |
| GGTGTCCATACAGCATCTCC+AGG | + | chr6.3:80469830-80469849 | MS.gene61373:CDS | 55.0% | |
| TGAATCACCGACACGGACAC+AGG | + | chr6.3:80470727-80470746 | MS.gene61373:intron | 55.0% | |
| TGCTTGCCTTGGTCACTGCT+TGG | + | chr6.3:80470240-80470259 | MS.gene61373:CDS | 55.0% | |
| ! | GGAAAACCGTGCGCGGTTTT+CGG | - | chr6.3:80470887-80470906 | None:intergenic | 55.0% |
| CGGTGAAGGAAAACCGTGCG+CGG | - | chr6.3:80470894-80470913 | None:intergenic | 60.0% | |
| GTCACTGCTTGGTTACGGCG+AGG | + | chr6.3:80470251-80470270 | MS.gene61373:CDS | 60.0% | |
| GTCGTGTCCTGTGTCCGTGT+CGG | - | chr6.3:80470737-80470756 | None:intergenic | 60.0% | |
| ! | CAGAGGTGTGCTAGACCCTC+CGG | - | chr6.3:80469227-80469246 | None:intergenic | 60.0% |
| ACTGGGCCGAAAACCGCGCA+CGG | + | chr6.3:80470878-80470897 | MS.gene61373:CDS | 65.0% | |
| ATGGACGGTGCAGGTTCCGG+AGG | + | chr6.3:80469208-80469227 | MS.gene61373:CDS | 65.0% | |
| CTTGGTTACGGCGAGGTCGC+TGG | + | chr6.3:80470258-80470277 | MS.gene61373:CDS | 65.0% | |
| TGGACGGTGCAGGTTCCGGA+GGG | + | chr6.3:80469209-80469228 | MS.gene61373:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 80466559 | 80471023 | 80466559 | ID=MS.gene61373 |
| chr6.3 | mRNA | 80466559 | 80471023 | 80466559 | ID=MS.gene61373.t1;Parent=MS.gene61373 |
| chr6.3 | exon | 80466559 | 80466906 | 80466559 | ID=MS.gene61373.t1.exon1;Parent=MS.gene61373.t1 |
| chr6.3 | CDS | 80466559 | 80466906 | 80466559 | ID=cds.MS.gene61373.t1;Parent=MS.gene61373.t1 |
| chr6.3 | exon | 80467537 | 80467615 | 80467537 | ID=MS.gene61373.t1.exon2;Parent=MS.gene61373.t1 |
| chr6.3 | CDS | 80467537 | 80467615 | 80467537 | ID=cds.MS.gene61373.t1;Parent=MS.gene61373.t1 |
| chr6.3 | exon | 80467786 | 80467921 | 80467786 | ID=MS.gene61373.t1.exon3;Parent=MS.gene61373.t1 |
| chr6.3 | CDS | 80467786 | 80467921 | 80467786 | ID=cds.MS.gene61373.t1;Parent=MS.gene61373.t1 |
| chr6.3 | exon | 80468178 | 80468252 | 80468178 | ID=MS.gene61373.t1.exon4;Parent=MS.gene61373.t1 |
| chr6.3 | CDS | 80468178 | 80468252 | 80468178 | ID=cds.MS.gene61373.t1;Parent=MS.gene61373.t1 |
| chr6.3 | exon | 80468354 | 80468549 | 80468354 | ID=MS.gene61373.t1.exon5;Parent=MS.gene61373.t1 |
| chr6.3 | CDS | 80468354 | 80468549 | 80468354 | ID=cds.MS.gene61373.t1;Parent=MS.gene61373.t1 |
| chr6.3 | exon | 80468878 | 80468946 | 80468878 | ID=MS.gene61373.t1.exon6;Parent=MS.gene61373.t1 |
| chr6.3 | CDS | 80468878 | 80468946 | 80468878 | ID=cds.MS.gene61373.t1;Parent=MS.gene61373.t1 |
| chr6.3 | exon | 80469115 | 80469254 | 80469115 | ID=MS.gene61373.t1.exon7;Parent=MS.gene61373.t1 |
| chr6.3 | CDS | 80469115 | 80469254 | 80469115 | ID=cds.MS.gene61373.t1;Parent=MS.gene61373.t1 |
| chr6.3 | exon | 80469757 | 80469879 | 80469757 | ID=MS.gene61373.t1.exon8;Parent=MS.gene61373.t1 |
| chr6.3 | CDS | 80469757 | 80469879 | 80469757 | ID=cds.MS.gene61373.t1;Parent=MS.gene61373.t1 |
| chr6.3 | exon | 80470100 | 80470292 | 80470100 | ID=MS.gene61373.t1.exon9;Parent=MS.gene61373.t1 |
| chr6.3 | CDS | 80470100 | 80470292 | 80470100 | ID=cds.MS.gene61373.t1;Parent=MS.gene61373.t1 |
| chr6.3 | exon | 80470838 | 80471023 | 80470838 | ID=MS.gene61373.t1.exon10;Parent=MS.gene61373.t1 |
| chr6.3 | CDS | 80470838 | 80471023 | 80470838 | ID=cds.MS.gene61373.t1;Parent=MS.gene61373.t1 |
| Gene Sequence |
| Protein sequence |
