Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61980.t1 | XP_003610434.1 | 95.6 | 524 | 20 | 1 | 132 | 655 | 526 | 1046 | 1.10E-296 | 1028.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61980.t1 | Q8W4K1 | 59.0 | 519 | 174 | 4 | 133 | 651 | 516 | 995 | 1.5e-174 | 614.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61980.t1 | G7JJ74 | 95.6 | 524 | 20 | 1 | 132 | 655 | 526 | 1046 | 7.6e-297 | 1028.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049207 | MS.gene61980 | 0.842518 | 2.46E-58 | -1.69E-46 |
| MS.gene049666 | MS.gene61980 | 0.820166 | 7.92E-53 | -1.69E-46 |
| MS.gene049824 | MS.gene61980 | 0.865277 | 6.64E-65 | -1.69E-46 |
| MS.gene049825 | MS.gene61980 | 0.826054 | 3.35E-54 | -1.69E-46 |
| MS.gene049873 | MS.gene61980 | 0.824482 | 7.88E-54 | -1.69E-46 |
| MS.gene050427 | MS.gene61980 | 0.810747 | 9.88E-51 | -1.69E-46 |
| MS.gene050885 | MS.gene61980 | 0.824656 | 7.17E-54 | -1.69E-46 |
| MS.gene051008 | MS.gene61980 | 0.82723 | 1.75E-54 | -1.69E-46 |
| MS.gene051720 | MS.gene61980 | 0.807164 | 5.78E-50 | -1.69E-46 |
| MS.gene051744 | MS.gene61980 | 0.818586 | 1.81E-52 | -1.69E-46 |
| MS.gene052582 | MS.gene61980 | 0.832894 | 7.29E-56 | -1.69E-46 |
| MS.gene052584 | MS.gene61980 | 0.852846 | 3.53E-61 | -1.69E-46 |
| MS.gene052867 | MS.gene61980 | 0.803931 | 2.75E-49 | -1.69E-46 |
| MS.gene053080 | MS.gene61980 | 0.824043 | 9.99E-54 | -1.69E-46 |
| MS.gene053122 | MS.gene61980 | 0.809988 | 1.44E-50 | -1.69E-46 |
| MS.gene053226 | MS.gene61980 | 0.875154 | 3.85E-68 | -1.69E-46 |
| MS.gene054651 | MS.gene61980 | 0.806932 | 6.47E-50 | -1.69E-46 |
| MS.gene055166 | MS.gene61980 | 0.805341 | 1.40E-49 | -1.69E-46 |
| MS.gene055512 | MS.gene61980 | 0.807202 | 5.67E-50 | -1.69E-46 |
| MS.gene055586 | MS.gene61980 | 0.811006 | 8.69E-51 | -1.69E-46 |
| MS.gene055589 | MS.gene61980 | 0.831777 | 1.38E-55 | -1.69E-46 |
| MS.gene055778 | MS.gene61980 | 0.827466 | 1.54E-54 | -1.69E-46 |
| MS.gene055808 | MS.gene61980 | 0.822858 | 1.89E-53 | -1.69E-46 |
| MS.gene056050 | MS.gene61980 | 0.813806 | 2.12E-51 | -1.69E-46 |
| MS.gene056498 | MS.gene61980 | 0.802716 | 4.92E-49 | -1.69E-46 |
| MS.gene056643 | MS.gene61980 | 0.807399 | 5.15E-50 | -1.69E-46 |
| MS.gene057060 | MS.gene61980 | 0.826579 | 2.51E-54 | -1.69E-46 |
| MS.gene057314 | MS.gene61980 | 0.814998 | 1.16E-51 | -1.69E-46 |
| MS.gene057444 | MS.gene61980 | 0.809295 | 2.03E-50 | -1.69E-46 |
| MS.gene05954 | MS.gene61980 | 0.83675 | 7.79E-57 | -1.69E-46 |
| MS.gene059625 | MS.gene61980 | 0.801232 | 9.92E-49 | -1.69E-46 |
| MS.gene059935 | MS.gene61980 | 0.824155 | 9.41E-54 | -1.69E-46 |
| MS.gene060429 | MS.gene61980 | 0.812634 | 3.84E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61980.t1 | MTR_4g132120 | 95.573 | 655 | 26 | 1 | 1 | 655 | 395 | 1046 | 0.0 | 1303 |
| MS.gene61980.t1 | MTR_4g109680 | 28.916 | 166 | 111 | 2 | 2 | 160 | 36 | 201 | 1.75e-15 | 80.5 |
| MS.gene61980.t1 | MTR_4g109680 | 30.857 | 175 | 98 | 6 | 1 | 160 | 86 | 252 | 4.85e-13 | 72.8 |
| MS.gene61980.t1 | MTR_4g109680 | 35.398 | 113 | 67 | 3 | 5 | 111 | 196 | 308 | 3.08e-11 | 67.0 |
| MS.gene61980.t1 | MTR_1g084120 | 26.543 | 162 | 116 | 3 | 2 | 160 | 138 | 299 | 9.44e-14 | 75.1 |
| MS.gene61980.t1 | MTR_1g084120 | 27.879 | 165 | 111 | 4 | 2 | 160 | 37 | 199 | 6.93e-12 | 68.9 |
| MS.gene61980.t1 | MTR_1g084120 | 27.928 | 111 | 80 | 0 | 1 | 111 | 190 | 300 | 5.66e-11 | 66.2 |
| MS.gene61980.t1 | MTR_2g019860 | 27.500 | 160 | 114 | 2 | 5 | 162 | 160 | 319 | 5.39e-11 | 66.2 |
| MS.gene61980.t1 | MTR_7g113200 | 27.717 | 184 | 110 | 7 | 9 | 184 | 154 | 322 | 6.71e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61980.t1 | AT4G04670 | 59.447 | 651 | 225 | 4 | 1 | 651 | 384 | 995 | 0.0 | 795 |
| MS.gene61980.t1 | AT1G18610 | 36.257 | 171 | 94 | 5 | 1 | 160 | 86 | 252 | 4.92e-19 | 91.7 |
| MS.gene61980.t1 | AT1G18610 | 30.935 | 139 | 89 | 2 | 2 | 133 | 36 | 174 | 4.36e-13 | 72.8 |
| MS.gene61980.t1 | AT1G18610 | 38.938 | 113 | 63 | 3 | 5 | 111 | 196 | 308 | 1.07e-12 | 71.6 |
| MS.gene61980.t1 | AT1G18610 | 36.257 | 171 | 94 | 5 | 1 | 160 | 86 | 252 | 4.92e-19 | 91.7 |
| MS.gene61980.t1 | AT1G18610 | 30.935 | 139 | 89 | 2 | 2 | 133 | 36 | 174 | 4.36e-13 | 72.8 |
| MS.gene61980.t1 | AT1G18610 | 38.938 | 113 | 63 | 3 | 5 | 111 | 196 | 308 | 1.07e-12 | 71.6 |
| MS.gene61980.t1 | AT1G74150 | 32.026 | 153 | 95 | 3 | 1 | 146 | 67 | 217 | 1.48e-17 | 87.0 |
| MS.gene61980.t1 | AT1G74150 | 35.652 | 115 | 68 | 3 | 3 | 111 | 175 | 289 | 4.82e-11 | 66.2 |
| MS.gene61980.t1 | AT1G74150 | 32.026 | 153 | 95 | 3 | 1 | 146 | 83 | 233 | 1.87e-17 | 86.7 |
| MS.gene61980.t1 | AT1G74150 | 26.786 | 168 | 112 | 4 | 2 | 160 | 33 | 198 | 2.18e-12 | 70.5 |
| MS.gene61980.t1 | AT1G74150 | 36.283 | 113 | 66 | 3 | 5 | 111 | 193 | 305 | 7.52e-11 | 65.5 |
| MS.gene61980.t1 | AT1G74150 | 32.026 | 153 | 95 | 3 | 1 | 146 | 83 | 233 | 2.03e-17 | 86.7 |
| MS.gene61980.t1 | AT1G74150 | 26.786 | 168 | 112 | 4 | 2 | 160 | 33 | 198 | 2.32e-12 | 70.5 |
| MS.gene61980.t1 | AT1G74150 | 36.283 | 113 | 66 | 3 | 5 | 111 | 193 | 305 | 8.10e-11 | 65.5 |
| MS.gene61980.t1 | AT1G74150 | 32.026 | 153 | 95 | 3 | 1 | 146 | 83 | 233 | 2.03e-17 | 86.7 |
| MS.gene61980.t1 | AT1G74150 | 26.786 | 168 | 112 | 4 | 2 | 160 | 33 | 198 | 2.27e-12 | 70.5 |
| MS.gene61980.t1 | AT1G74150 | 36.283 | 113 | 66 | 3 | 5 | 111 | 193 | 305 | 7.63e-11 | 65.5 |
| MS.gene61980.t1 | AT5G27630 | 27.647 | 170 | 111 | 4 | 1 | 161 | 304 | 470 | 1.62e-12 | 71.2 |
| MS.gene61980.t1 | AT5G27630 | 27.647 | 170 | 111 | 4 | 1 | 161 | 304 | 470 | 1.65e-12 | 71.2 |
| MS.gene61980.t1 | AT5G27630 | 27.647 | 170 | 111 | 4 | 1 | 161 | 304 | 470 | 1.78e-12 | 70.9 |
| MS.gene61980.t1 | AT5G27630 | 27.647 | 170 | 111 | 4 | 1 | 161 | 304 | 470 | 3.74e-12 | 69.7 |
| MS.gene61980.t1 | AT1G74150 | 36.283 | 113 | 66 | 3 | 5 | 111 | 27 | 139 | 2.08e-11 | 66.6 |
| MS.gene61980.t1 | AT1G74150 | 36.283 | 113 | 66 | 3 | 5 | 111 | 27 | 139 | 2.08e-11 | 66.6 |
| MS.gene61980.t1 | AT3G05420 | 28.070 | 171 | 109 | 6 | 1 | 161 | 303 | 469 | 2.70e-11 | 67.4 |
| MS.gene61980.t1 | AT3G05420 | 28.070 | 171 | 109 | 6 | 1 | 161 | 304 | 470 | 2.71e-11 | 67.4 |
| MS.gene61980.t1 | AT5G18590 | 28.049 | 164 | 115 | 3 | 2 | 162 | 146 | 309 | 9.96e-11 | 65.5 |
| MS.gene61980.t1 | AT5G18590 | 28.049 | 164 | 115 | 3 | 2 | 162 | 146 | 309 | 9.96e-11 | 65.5 |
Find 151 sgRNAs with CRISPR-Local
Find 338 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTTCAAACATTTATGTATT+TGG | 0.141565 | 8.2:+2141297 | MS.gene61980:CDS |
| AAGAATTATCTTGGAGTTCT+TGG | 0.212452 | 8.2:+2141597 | MS.gene61980:CDS |
| TCACCGCTGTGAGGGCTTTA+AGG | 0.213819 | 8.2:+2144878 | MS.gene61980:CDS |
| TTGATTTGAAGCTTCATATA+TGG | 0.232769 | 8.2:+2141661 | MS.gene61980:CDS |
| TGGAAAGAAATTCCAGTTTC+CGG | 0.247977 | 8.2:+2141381 | MS.gene61980:CDS |
| ACATCTTTGATTGAGGAAAA+AGG | 0.279301 | 8.2:+2142410 | MS.gene61980:CDS |
| TCTTGACAATGTTGTGTTAC+TGG | 0.284539 | 8.2:-2141627 | None:intergenic |
| CAGCATATAATTGACCTAAA+TGG | 0.315607 | 8.2:+2141882 | MS.gene61980:CDS |
| TGTCATGTGAATGCATTAAA+TGG | 0.317245 | 8.2:-2141833 | None:intergenic |
| CATGAAAGGAATCAACATTC+AGG | 0.318176 | 8.2:+2142194 | MS.gene61980:CDS |
| AGCTGTGTCAAGAATATAAA+AGG | 0.325039 | 8.2:-2141349 | None:intergenic |
| TCCCTTTCATCCCTCCATTT+AGG | 0.330531 | 8.2:-2141896 | None:intergenic |
| GTGATGATCTTGTTATAGTT+GGG | 0.335187 | 8.2:+2141748 | MS.gene61980:CDS |
| AGAGAAGAAATATGCAAAAC+AGG | 0.336676 | 8.2:+2142058 | MS.gene61980:CDS |
| CTGACTCTTCTCCACGAATA+TGG | 0.341435 | 8.2:+2142308 | MS.gene61980:CDS |
| TGCCAACCATTTGTTATCTC+TGG | 0.348694 | 8.2:-2145818 | None:intergenic |
| TTTGTCTATAAGAATTATCT+TGG | 0.351667 | 8.2:+2141588 | MS.gene61980:CDS |
| TATGGCCAGTCCCCGGAAAC+TGG | 0.353816 | 8.2:-2141393 | None:intergenic |
| GGAAAGAAATTCCAGTTTCC+GGG | 0.373988 | 8.2:+2141382 | MS.gene61980:CDS |
| TGGGTTAACCATCGAGAAAA+TGG | 0.379080 | 8.2:+2143485 | MS.gene61980:CDS |
| ACGATGAGCCTTAAGTGATT+TGG | 0.379534 | 8.2:-2142693 | None:intergenic |
| AAGGATATATTGAAGAAATT+CGG | 0.384486 | 8.2:+2142083 | MS.gene61980:CDS |
| CGAATATGGTGCCGTTCTGC+TGG | 0.386983 | 8.2:+2142322 | MS.gene61980:CDS |
| GGTGATGATCTTGTTATAGT+TGG | 0.388743 | 8.2:+2141747 | MS.gene61980:CDS |
| ACCCAGCTGCATTCACTAGA+TGG | 0.396380 | 8.2:-2144856 | None:intergenic |
| TCCAGCTTGTGTAAGTGGTT+TGG | 0.399575 | 8.2:-2142252 | None:intergenic |
| AATTGTTGCCAAATCACTTA+AGG | 0.399779 | 8.2:+2142685 | MS.gene61980:CDS |
| TTTATGTTTGGTGGATATGA+TGG | 0.402872 | 8.2:+2141459 | MS.gene61980:CDS |
| CCTCGTCTTTGCAATCCATC+TGG | 0.405091 | 8.2:-2143580 | None:intergenic |
| TATTCTTTCAGGATATTGTT+GGG | 0.406583 | 8.2:+2145710 | MS.gene61980:intron |
| AAATTCCAGTTTCCGGGGAC+TGG | 0.410650 | 8.2:+2141388 | MS.gene61980:CDS |
| CAATGGTAGCATCTGATTCT+CGG | 0.411027 | 8.2:+2141433 | MS.gene61980:CDS |
| AAGTATCCAGCTTGTGTAAG+TGG | 0.411801 | 8.2:-2142257 | None:intergenic |
| ATTTGGCAGATGTTCAAGTT+GGG | 0.415914 | 8.2:-2141943 | None:intergenic |
| GCAAAATACCTGACAAGAAA+AGG | 0.416893 | 8.2:-2143644 | None:intergenic |
| TGCAATCCATCTGGGCCATC+CGG | 0.417636 | 8.2:-2143571 | None:intergenic |
| GTAGATCTGTTTGCGGGCAT+TGG | 0.419948 | 8.2:+2143608 | MS.gene61980:CDS |
| ATACAGCAAACAGCTCTTGA+TGG | 0.421006 | 8.2:-2142169 | None:intergenic |
| TTCATTCAAGAATTCTTTGT+GGG | 0.424440 | 8.2:+2142637 | MS.gene61980:CDS |
| GAGATTCTTGTTGGAGATGA+TGG | 0.427737 | 8.2:+2143461 | MS.gene61980:CDS |
| CTTGTACCAGTTGCAGCAAT+CGG | 0.427990 | 8.2:-2143425 | None:intergenic |
| ATTATGTCGGAGTGCTTCTA+TGG | 0.431886 | 8.2:-2144080 | None:intergenic |
| TTCCATCTAGTGAATGCAGC+TGG | 0.433924 | 8.2:+2144854 | MS.gene61980:CDS |
| AATTCGGATGGTTAGACTTA+GGG | 0.437238 | 8.2:+2142099 | MS.gene61980:CDS |
| GGTGGAATATTACATGTTCA+TGG | 0.445722 | 8.2:+2145494 | MS.gene61980:CDS |
| AAATTCGGATGGTTAGACTT+AGG | 0.446168 | 8.2:+2142098 | MS.gene61980:CDS |
| TTATTCTTTCAGGATATTGT+TGG | 0.447757 | 8.2:+2145709 | MS.gene61980:intron |
| CAGGGCCCGATTGCTGCAAC+TGG | 0.448652 | 8.2:+2143419 | MS.gene61980:intron |
| TTCTTGTTGGAGATGATGGT+TGG | 0.448678 | 8.2:+2143465 | MS.gene61980:CDS |
| GGTGCATCATGCTATGCATT+TGG | 0.450766 | 8.2:+2141774 | MS.gene61980:CDS |
| AGTACATTAGAGATTCTTGT+TGG | 0.452862 | 8.2:+2143452 | MS.gene61980:CDS |
| CATATTCGTGGAGAAGAGTC+AGG | 0.454507 | 8.2:-2142307 | None:intergenic |
| TCGGAGTGCTTCTATGGCAT+GGG | 0.459108 | 8.2:-2144074 | None:intergenic |
| GTCGGAGTGCTTCTATGGCA+TGG | 0.461034 | 8.2:-2144075 | None:intergenic |
| CTACAAAATGCATGTTCTCA+TGG | 0.463144 | 8.2:+2143528 | MS.gene61980:CDS |
| TACAAAATGCATGTTCTCAT+GGG | 0.464687 | 8.2:+2143529 | MS.gene61980:CDS |
| TATTTGGCAGATGTTCAAGT+TGG | 0.470539 | 8.2:-2141944 | None:intergenic |
| GTTATAGTAGATCTGTTTGC+GGG | 0.472107 | 8.2:+2143602 | MS.gene61980:CDS |
| CATGTTACCCTTAATTCTGC+AGG | 0.472976 | 8.2:+2141687 | MS.gene61980:CDS |
| ACCTAAATGGAGGGATGAAA+GGG | 0.473309 | 8.2:+2141895 | MS.gene61980:CDS |
| TCCAAACCACTTACACAAGC+TGG | 0.473595 | 8.2:+2142251 | MS.gene61980:CDS |
| TGGAGGGATGAAAGGGAATA+CGG | 0.474115 | 8.2:+2141902 | MS.gene61980:CDS |
| TATGATGGTGGGAAAGCACT+TGG | 0.478414 | 8.2:+2141474 | MS.gene61980:CDS |
| GACCTAAATGGAGGGATGAA+AGG | 0.478442 | 8.2:+2141894 | MS.gene61980:CDS |
| GAAATATGCAAAACAGGGTA+AGG | 0.481290 | 8.2:+2142064 | MS.gene61980:CDS |
| TCTTGTTGGAGATGATGGTT+GGG | 0.481407 | 8.2:+2143466 | MS.gene61980:CDS |
| CAGCTGGGTCACCGCTGTGA+GGG | 0.483647 | 8.2:+2144870 | MS.gene61980:CDS |
| TTCAGGAGATCCTATTGATC+GGG | 0.489591 | 8.2:+2142211 | MS.gene61980:CDS |
| AAGAGTCAGGGCTTCAGAGC+AGG | 0.492952 | 8.2:-2142294 | None:intergenic |
| CCATCACTCATTTCTTTCAA+AGG | 0.493655 | 8.2:-2142383 | None:intergenic |
| GCATGAGAGTGACGTGCATA+TGG | 0.500741 | 8.2:-2141411 | None:intergenic |
| GTGTAAGTGGTTTGGAAAGT+GGG | 0.502020 | 8.2:-2142244 | None:intergenic |
| CTTCATTCAAGAATTCTTTG+TGG | 0.505821 | 8.2:+2142636 | MS.gene61980:CDS |
| AATCAATATTGCAGGAAAGA+AGG | 0.506569 | 8.2:+2145473 | MS.gene61980:intron |
| AATTATCTTGGAGTTCTTGG+TGG | 0.509047 | 8.2:+2141600 | MS.gene61980:CDS |
| CTCGTCTTTGCAATCCATCT+GGG | 0.510243 | 8.2:-2143579 | None:intergenic |
| ATGATGGTGGGAAAGCACTT+GGG | 0.511398 | 8.2:+2141475 | MS.gene61980:CDS |
| TTGACACAGCTAATTTACAT+TGG | 0.512854 | 8.2:+2141361 | MS.gene61980:CDS |
| TCAAACATTTATGTATTTGG+AGG | 0.513250 | 8.2:+2141300 | MS.gene61980:CDS |
| GTAATCTTTCTGAGAAGCTC+CGG | 0.514226 | 8.2:+2143552 | MS.gene61980:CDS |
| GATAACTTGCTTCACATCAA+TGG | 0.515962 | 8.2:+2141996 | MS.gene61980:CDS |
| TATGAAATTGCTAGATCTGA+AGG | 0.516115 | 8.2:+2145572 | MS.gene61980:CDS |
| GCAGAACGGCACCATATTCG+TGG | 0.517484 | 8.2:-2142319 | None:intergenic |
| TGTGTAAGTGGTTTGGAAAG+TGG | 0.518149 | 8.2:-2142245 | None:intergenic |
| TTGTACCAGTTGCAGCAATC+GGG | 0.518517 | 8.2:-2143424 | None:intergenic |
| TAATCGAAATACAGCTCCTA+AGG | 0.522710 | 8.2:+2144150 | MS.gene61980:CDS |
| TGGAGTAACATCTTTGATTG+AGG | 0.527852 | 8.2:+2142403 | MS.gene61980:CDS |
| TGGAAGAAAGAAATAACAGC+TGG | 0.528274 | 8.2:+2141531 | MS.gene61980:CDS |
| AATTTAATTGTAGATTATGT+CGG | 0.533069 | 8.2:-2144093 | None:intergenic |
| TGTTTGCTGTATTTCATGAA+AGG | 0.536960 | 8.2:+2142180 | MS.gene61980:CDS |
| CCTACCGACTGGGCTTCTAC+AGG | 0.537230 | 8.2:+2142433 | MS.gene61980:CDS |
| GAATTCTTGAATGAAGTAGC+TGG | 0.539392 | 8.2:-2142629 | None:intergenic |
| ATGTTTGGTGGATATGATGG+TGG | 0.540373 | 8.2:+2141462 | MS.gene61980:CDS |
| GTGGCTGATAGAGTCTGTCT+TGG | 0.546400 | 8.2:+2144826 | MS.gene61980:CDS |
| CGTAGTACAGCCAATGTTGT+CGG | 0.550198 | 8.2:+2141726 | MS.gene61980:CDS |
| GTGGAATATTACATGTTCAT+GGG | 0.556085 | 8.2:+2145495 | MS.gene61980:CDS |
| AACTTTATCTTCCAGCAGAA+CGG | 0.556322 | 8.2:-2142333 | None:intergenic |
| GTGAATGCATTAAATGGAGC+AGG | 0.556537 | 8.2:-2141827 | None:intergenic |
| GCAAACAGCTCTTGATGGAC+CGG | 0.556550 | 8.2:-2142164 | None:intergenic |
| GCAGCTGGGTCACCGCTGTG+AGG | 0.556953 | 8.2:+2144869 | MS.gene61980:CDS |
| GGTTATAGTAGATCTGTTTG+CGG | 0.557019 | 8.2:+2143601 | MS.gene61980:CDS |
| CTGGAAGGAATCCACATGCC+AGG | 0.557506 | 8.2:+2141550 | MS.gene61980:CDS |
| GAAGCTCCGGATGGCCCAGA+TGG | 0.557889 | 8.2:+2143565 | MS.gene61980:CDS |
| TCCATCTAGTGAATGCAGCT+GGG | 0.558888 | 8.2:+2144855 | MS.gene61980:CDS |
| ATTCAGGAGATCCTATTGAT+CGG | 0.559033 | 8.2:+2142210 | MS.gene61980:CDS |
| TTTGGCAGATGTTCAAGTTG+GGG | 0.560388 | 8.2:-2141942 | None:intergenic |
| GAGCGTTGTATCGTGATTGA+AGG | 0.564770 | 8.2:+2144124 | MS.gene61980:CDS |
| TGATGATCTTGTTATAGTTG+GGG | 0.566628 | 8.2:+2141749 | MS.gene61980:CDS |
| CATATAATTGACCTAAATGG+AGG | 0.572614 | 8.2:+2141885 | MS.gene61980:CDS |
| AACACAACATTGTCAAGAGT+TGG | 0.575854 | 8.2:+2141632 | MS.gene61980:CDS |
| AGCATGTTGAAAGAGTGAAA+TGG | 0.581598 | 8.2:+2145745 | MS.gene61980:CDS |
| TGTTTGGTGGATATGATGGT+GGG | 0.585310 | 8.2:+2141463 | MS.gene61980:CDS |
| CCTGTAGAAGCCCAGTCGGT+AGG | 0.587003 | 8.2:-2142433 | None:intergenic |
| ACGTGCATATGGCCAGTCCC+CGG | 0.591389 | 8.2:-2141400 | None:intergenic |
| AAGATCATCACCGACAACAT+TGG | 0.592481 | 8.2:-2141736 | None:intergenic |
| TTCTACAGGAATTGCCAACA+AGG | 0.592547 | 8.2:+2142447 | MS.gene61980:CDS |
| CAATATTGCAGGAAAGAAGG+TGG | 0.595937 | 8.2:+2145476 | MS.gene61980:intron |
| TGATGGTGGGAAAGCACTTG+GGG | 0.597859 | 8.2:+2141476 | MS.gene61980:CDS |
| TCGGATGGTTAGACTTAGGG+AGG | 0.599795 | 8.2:+2142102 | MS.gene61980:CDS |
| AGGATTCAGAGGAGTGTCAG+TGG | 0.600617 | 8.2:+2145525 | MS.gene61980:CDS |
| ACATGTTCATGGGAATGCAA+AGG | 0.601338 | 8.2:+2145505 | MS.gene61980:CDS |
| TGCACGTCACTCTCATGCAA+TGG | 0.604375 | 8.2:+2141416 | MS.gene61980:CDS |
| GAGGAAAGCATACTCTGAAG+AGG | 0.606275 | 8.2:+2142121 | MS.gene61980:CDS |
| GGCATGGGGATTCCACTCAC+AGG | 0.607533 | 8.2:-2144059 | None:intergenic |
| CCTTTGAAAGAAATGAGTGA+TGG | 0.608678 | 8.2:+2142383 | MS.gene61980:CDS |
| TTGATGTTCAGACGAGTCAG+TGG | 0.614484 | 8.2:+2141511 | MS.gene61980:CDS |
| GCAACAACGTGGCGAATGTG+TGG | 0.614583 | 8.2:-2145774 | None:intergenic |
| AATACGGTTGAAAATTCTCA+AGG | 0.619586 | 8.2:+2141918 | MS.gene61980:CDS |
| ATATATTGAAGAAATTCGGA+TGG | 0.620137 | 8.2:+2142087 | MS.gene61980:CDS |
| TGGGAATGCAAAGGATTCAG+AGG | 0.621463 | 8.2:+2145514 | MS.gene61980:CDS |
| AGTTGCAGAACACAGTGCAA+TGG | 0.622921 | 8.2:-2142035 | None:intergenic |
| AGGAAAGCATACTCTGAAGA+GGG | 0.623235 | 8.2:+2142122 | MS.gene61980:CDS |
| AGAAAGAAATAACAGCTGGA+AGG | 0.623501 | 8.2:+2141535 | MS.gene61980:CDS |
| CGGAGTGCTTCTATGGCATG+GGG | 0.627548 | 8.2:-2144073 | None:intergenic |
| ATATAATTGACCTAAATGGA+GGG | 0.638000 | 8.2:+2141886 | MS.gene61980:CDS |
| CCAGATGGATTGCAAAGACG+AGG | 0.638045 | 8.2:+2143580 | MS.gene61980:CDS |
| ACTCTATTGCAGAAGAGCTG+TGG | 0.638792 | 8.2:+2142660 | MS.gene61980:CDS |
| GAAAGAAATTCCAGTTTCCG+GGG | 0.640177 | 8.2:+2141383 | MS.gene61980:CDS |
| AACTTGTATATGCCTGTGAG+TGG | 0.644407 | 8.2:+2144047 | MS.gene61980:CDS |
| TGTGTCAAGAATATAAAAGG+AGG | 0.644755 | 8.2:-2141346 | None:intergenic |
| TCTTTCAGGATATTGTTGGG+AGG | 0.653863 | 8.2:+2145713 | MS.gene61980:intron |
| TCTTTCTGAGAAGCTCCGGA+TGG | 0.656387 | 8.2:+2143556 | MS.gene61980:CDS |
| GAGAAGAAATATGCAAAACA+GGG | 0.658228 | 8.2:+2142059 | MS.gene61980:CDS |
| AAAGCATACTCTGAAGAGGG+TGG | 0.658446 | 8.2:+2142125 | MS.gene61980:CDS |
| ACAAAATGCATGTTCTCATG+GGG | 0.659790 | 8.2:+2143530 | MS.gene61980:CDS |
| AATTCCTGTAGAAGCCCAGT+CGG | 0.664705 | 8.2:-2142437 | None:intergenic |
| GAGTGGGAGAACCTGGCATG+TGG | 0.673955 | 8.2:-2141561 | None:intergenic |
| ATATTCGTGGAGAAGAGTCA+GGG | 0.674148 | 8.2:-2142306 | None:intergenic |
| GATGATCTTGTTATAGTTGG+GGG | 0.705795 | 8.2:+2141750 | MS.gene61980:CDS |
| ATCTCACATCTGCAACAACG+TGG | 0.710629 | 8.2:-2145785 | None:intergenic |
| TTACCTTAAAGCCCTCACAG+CGG | 0.815668 | 8.2:-2144881 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAACAATAATATATTATCAT+GGG | - | chr8.2:2145043-2145062 | None:intergenic | 10.0% |
| !! | AAGAAAAAAATAAAAAAATC+GGG | - | chr8.2:2142929-2142948 | None:intergenic | 10.0% |
| !! | TTGGTTAAAAAATAAATAAA+GGG | + | chr8.2:2144629-2144648 | MS.gene61980:intron | 10.0% |
| !! | TTTGGTTAAAAAATAAATAA+AGG | + | chr8.2:2144628-2144647 | MS.gene61980:intron | 10.0% |
| !!! | ATATATTTTTTTTGAAAACT+CGG | + | chr8.2:2142844-2142863 | MS.gene61980:intron | 10.0% |
| !! | AAAATATCATTTATGTATAG+AGG | - | chr8.2:2142819-2142838 | None:intergenic | 15.0% |
| !! | AAATAGTATAATATAATTGG+AGG | - | chr8.2:2143704-2143723 | None:intergenic | 15.0% |
| !! | AAATATCATTTATGTATAGA+GGG | - | chr8.2:2142818-2142837 | None:intergenic | 15.0% |
| !! | AATTTAATTGTAGATTATGT+CGG | - | chr8.2:2144096-2144115 | None:intergenic | 15.0% |
| !! | ATTGATTAAATTCTAATTGA+TGG | + | chr8.2:2144999-2145018 | MS.gene61980:intron | 15.0% |
| !! | CAAACAATAATATATTATCA+TGG | - | chr8.2:2145044-2145063 | None:intergenic | 15.0% |
| !! | TAATAATTGATATGACTATA+GGG | - | chr8.2:2144740-2144759 | None:intergenic | 15.0% |
| !! | TTTATGTATATATGATTACT+TGG | - | chr8.2:2142727-2142746 | None:intergenic | 15.0% |
| !!! | TATTTTTTAACCAAAAACAA+GGG | - | chr8.2:2144623-2144642 | None:intergenic | 15.0% |
| !!! | TTATAAAAGCATTTTTAAAC+TGG | + | chr8.2:2145168-2145187 | MS.gene61980:intron | 15.0% |
| !!! | TTATTTTTTAACCAAAAACA+AGG | - | chr8.2:2144624-2144643 | None:intergenic | 15.0% |
| !! | AAAATATCATTTATGTATCG+AGG | - | chr8.2:2142973-2142992 | None:intergenic | 20.0% |
| !! | AAATATCATTTATGTATCGA+GGG | - | chr8.2:2142972-2142991 | None:intergenic | 20.0% |
| !! | AAATTAGTATGATGAAACTA+TGG | - | chr8.2:2142787-2142806 | None:intergenic | 20.0% |
| !! | AACTAAATTCCATTCATAAT+TGG | - | chr8.2:2143130-2143149 | None:intergenic | 20.0% |
| !! | AAGGATATATTGAAGAAATT+CGG | + | chr8.2:2142083-2142102 | MS.gene61980:CDS | 20.0% |
| !! | AGTAAATAACCAGATAATAT+TGG | - | chr8.2:2143807-2143826 | None:intergenic | 20.0% |
| !! | CATAATAAAAAATACCTTGT+TGG | - | chr8.2:2142464-2142483 | None:intergenic | 20.0% |
| !! | CTAATAATTGATATGACTAT+AGG | - | chr8.2:2144741-2144760 | None:intergenic | 20.0% |
| !! | CTTAATTTACCAATTATGAA+TGG | + | chr8.2:2143118-2143137 | MS.gene61980:intron | 20.0% |
| !! | GAATATCTAATAATGACATT+CGG | + | chr8.2:2143080-2143099 | MS.gene61980:intron | 20.0% |
| !! | GAATTATATAGACAACAATA+CGG | - | chr8.2:2145067-2145086 | None:intergenic | 20.0% |
| !! | GATGTATTATTTATCTTGTT+TGG | + | chr8.2:2144560-2144579 | MS.gene61980:intron | 20.0% |
| !! | TAAAAATAAGTTCAAGAACT+TGG | - | chr8.2:2145151-2145170 | None:intergenic | 20.0% |
| !! | TTAAAACTGAGATTAAGAAT+TGG | + | chr8.2:2143895-2143914 | MS.gene61980:intron | 20.0% |
| !! | TTAAATTAACCACAATTGAA+AGG | - | chr8.2:2144214-2144233 | None:intergenic | 20.0% |
| !! | TTCTATTATCTTTCACATAA+AGG | - | chr8.2:2143031-2143050 | None:intergenic | 20.0% |
| !! | TTCTTCCATTATTCATAAAT+TGG | - | chr8.2:2144501-2144520 | None:intergenic | 20.0% |
| !! | TTTGTCTATAAGAATTATCT+TGG | + | chr8.2:2141588-2141607 | MS.gene61980:CDS | 20.0% |
| !!! | AGGTTAAATTTAAAACTGAT+GGG | - | chr8.2:2144476-2144495 | None:intergenic | 20.0% |
| !!! | ATATTCTCTCGTTTTTTTTA+GGG | - | chr8.2:2143066-2143085 | None:intergenic | 20.0% |
| !!! | ATTTTCTTTAATTAATCAGC+TGG | + | chr8.2:2144258-2144277 | MS.gene61980:intron | 20.0% |
| !!! | ATTTTTTAACCAAAAACAAG+GGG | - | chr8.2:2144622-2144641 | None:intergenic | 20.0% |
| !!! | CTTTCATTTTCAGATATATT+TGG | - | chr8.2:2141963-2141982 | None:intergenic | 20.0% |
| !!! | GTTTGTAATGCTTTATTATT+GGG | + | chr8.2:2143293-2143312 | MS.gene61980:intron | 20.0% |
| !!! | TATTGATTTTGAAGTATTGT+GGG | + | chr8.2:2144288-2144307 | MS.gene61980:intron | 20.0% |
| !!! | TGTTTGTAATGCTTTATTAT+TGG | + | chr8.2:2143292-2143311 | MS.gene61980:intron | 20.0% |
| !!! | TTTTATTATGATTGCTTCTA+TGG | + | chr8.2:2142474-2142493 | MS.gene61980:intron | 20.0% |
| ! | AAGAACAAAAAATTATCCTC+TGG | - | chr8.2:2143216-2143235 | None:intergenic | 25.0% |
| ! | AAGTAAAACAGTCATAAAGT+TGG | - | chr8.2:2145315-2145334 | None:intergenic | 25.0% |
| ! | ATATAATTGACCTAAATGGA+GGG | + | chr8.2:2141886-2141905 | MS.gene61980:CDS | 25.0% |
| ! | ATATATTGAAGAAATTCGGA+TGG | + | chr8.2:2142087-2142106 | MS.gene61980:CDS | 25.0% |
| ! | CAACAAAAATCCTAAATGAA+TGG | - | chr8.2:2142527-2142546 | None:intergenic | 25.0% |
| ! | CACAATACTTCAAAATCAAT+AGG | - | chr8.2:2144289-2144308 | None:intergenic | 25.0% |
| ! | CTTATAGACAAAAATTGAGT+GGG | - | chr8.2:2141580-2141599 | None:intergenic | 25.0% |
| ! | GATATGAACCATAATAATTC+AGG | - | chr8.2:2145242-2145261 | None:intergenic | 25.0% |
| ! | GGTTCAAACATTTATGTATT+TGG | + | chr8.2:2141297-2141316 | MS.gene61980:CDS | 25.0% |
| ! | GTATAATATAATTGGAGGTT+AGG | - | chr8.2:2143699-2143718 | None:intergenic | 25.0% |
| ! | TATTCTTTCAGGATATTGTT+GGG | + | chr8.2:2145710-2145729 | MS.gene61980:intron | 25.0% |
| ! | TCAAACATTTATGTATTTGG+AGG | + | chr8.2:2141300-2141319 | MS.gene61980:CDS | 25.0% |
| ! | TCTTATAGACAAAAATTGAG+TGG | - | chr8.2:2141581-2141600 | None:intergenic | 25.0% |
| ! | TGTGATGATAAATGAATCTT+TGG | - | chr8.2:2144423-2144442 | None:intergenic | 25.0% |
| ! | TTATTCTTTCAGGATATTGT+TGG | + | chr8.2:2145709-2145728 | MS.gene61980:intron | 25.0% |
| ! | TTCATTCAAGAATTCTTTGT+GGG | + | chr8.2:2142637-2142656 | MS.gene61980:CDS | 25.0% |
| !! | ATGTCGATATTTTCATTTTC+AGG | + | chr8.2:2144801-2144820 | MS.gene61980:intron | 25.0% |
| !! | CAGGTTAAATTTAAAACTGA+TGG | - | chr8.2:2144477-2144496 | None:intergenic | 25.0% |
| !! | GTATTGATCCTGAATTATTA+TGG | + | chr8.2:2145231-2145250 | MS.gene61980:intron | 25.0% |
| !! | GTTCTTTTAATATGCAAACT+AGG | + | chr8.2:2143230-2143249 | MS.gene61980:intron | 25.0% |
| !! | TGTCGATATTTTCATTTTCA+GGG | + | chr8.2:2144802-2144821 | MS.gene61980:intron | 25.0% |
| !! | TTGATTTGAAGCTTCATATA+TGG | + | chr8.2:2141661-2141680 | MS.gene61980:CDS | 25.0% |
| !! | TTGTTGAATTGTAACTTGTA+AGG | - | chr8.2:2144925-2144944 | None:intergenic | 25.0% |
| !! | TTTCTAGTATCAATTGTTTC+AGG | + | chr8.2:2143921-2143940 | MS.gene61980:intron | 25.0% |
| !!! | ATCTCAGTTTTAATAATCTC+AGG | - | chr8.2:2143888-2143907 | None:intergenic | 25.0% |
| !!! | CATCAGTTTTAAATTTAACC+TGG | + | chr8.2:2144475-2144494 | MS.gene61980:intron | 25.0% |
| !!! | CTATTGATTTTGAAGTATTG+TGG | + | chr8.2:2144287-2144306 | MS.gene61980:intron | 25.0% |
| !!! | GATATTCTCTCGTTTTTTTT+AGG | - | chr8.2:2143067-2143086 | None:intergenic | 25.0% |
| !!! | TTCTTGTTTTCCATTCATTT+AGG | + | chr8.2:2142514-2142533 | MS.gene61980:intron | 25.0% |
| AAATAAGTTCAAGAACTTGG+TGG | - | chr8.2:2145148-2145167 | None:intergenic | 30.0% | |
| AAATGCCATGTTATACTTGT+TGG | + | chr8.2:2144359-2144378 | MS.gene61980:intron | 30.0% | |
| AACAAGAAGAGTTGAAAAGT+AGG | - | chr8.2:2142502-2142521 | None:intergenic | 30.0% | |
| AAGAAAATTTCTCCTTGCTA+AGG | - | chr8.2:2144246-2144265 | None:intergenic | 30.0% | |
| AAGAATTATCTTGGAGTTCT+TGG | + | chr8.2:2141597-2141616 | MS.gene61980:CDS | 30.0% | |
| AATACGGTTGAAAATTCTCA+AGG | + | chr8.2:2141918-2141937 | MS.gene61980:CDS | 30.0% | |
| AATCAATATTGCAGGAAAGA+AGG | + | chr8.2:2145473-2145492 | MS.gene61980:intron | 30.0% | |
| AATTGTTGCCAAATCACTTA+AGG | + | chr8.2:2142685-2142704 | MS.gene61980:CDS | 30.0% | |
| ACAATTCAACAAGACTTAAC+TGG | + | chr8.2:2144933-2144952 | MS.gene61980:intron | 30.0% | |
| ACACTTTAGCCAATATTATC+TGG | + | chr8.2:2143795-2143814 | MS.gene61980:intron | 30.0% | |
| ACATCTTTGATTGAGGAAAA+AGG | + | chr8.2:2142410-2142429 | MS.gene61980:CDS | 30.0% | |
| ACTACAAAACAAACCACTAA+AGG | - | chr8.2:2142559-2142578 | None:intergenic | 30.0% | |
| AGAGAAGAAATATGCAAAAC+AGG | + | chr8.2:2142058-2142077 | MS.gene61980:CDS | 30.0% | |
| AGCTGTGTCAAGAATATAAA+AGG | - | chr8.2:2141352-2141371 | None:intergenic | 30.0% | |
| AGTACATTAGAGATTCTTGT+TGG | + | chr8.2:2143452-2143471 | MS.gene61980:CDS | 30.0% | |
| AGTATAACATGGCATTTAGA+TGG | - | chr8.2:2144356-2144375 | None:intergenic | 30.0% | |
| ATAATATATTATCATGGGCG+TGG | - | chr8.2:2145038-2145057 | None:intergenic | 30.0% | |
| CAATCTATAGATTCTCATGA+TGG | - | chr8.2:2144983-2145002 | None:intergenic | 30.0% | |
| CAGCATATAATTGACCTAAA+TGG | + | chr8.2:2141882-2141901 | MS.gene61980:CDS | 30.0% | |
| CATATAATTGACCTAAATGG+AGG | + | chr8.2:2141885-2141904 | MS.gene61980:CDS | 30.0% | |
| CTACAAAACAAACCACTAAA+GGG | - | chr8.2:2142558-2142577 | None:intergenic | 30.0% | |
| CTGATCTGAATATCAACATT+TGG | + | chr8.2:2143842-2143861 | MS.gene61980:intron | 30.0% | |
| CTTCATTCAAGAATTCTTTG+TGG | + | chr8.2:2142636-2142655 | MS.gene61980:CDS | 30.0% | |
| GAGAAGAAATATGCAAAACA+GGG | + | chr8.2:2142059-2142078 | MS.gene61980:CDS | 30.0% | |
| GATATATAACACAAGTTAGC+TGG | + | chr8.2:2143389-2143408 | MS.gene61980:intron | 30.0% | |
| GTGGAATATTACATGTTCAT+GGG | + | chr8.2:2145495-2145514 | MS.gene61980:CDS | 30.0% | |
| TACAAAATGCATGTTCTCAT+GGG | + | chr8.2:2143529-2143548 | MS.gene61980:CDS | 30.0% | |
| TATGAAATTGCTAGATCTGA+AGG | + | chr8.2:2145572-2145591 | MS.gene61980:CDS | 30.0% | |
| TATGACCAACAAGTATAACA+TGG | - | chr8.2:2144367-2144386 | None:intergenic | 30.0% | |
| TATTTCAATGTCGATCATCA+GGG | - | chr8.2:2145121-2145140 | None:intergenic | 30.0% | |
| TGTCATGTGAATGCATTAAA+TGG | - | chr8.2:2141836-2141855 | None:intergenic | 30.0% | |
| TGTGTCAAGAATATAAAAGG+AGG | - | chr8.2:2141349-2141368 | None:intergenic | 30.0% | |
| TTATTTCAATGTCGATCATC+AGG | - | chr8.2:2145122-2145141 | None:intergenic | 30.0% | |
| TTCCTACTGCATATATCAAT+GGG | - | chr8.2:2144766-2144785 | None:intergenic | 30.0% | |
| TTGACACAGCTAATTTACAT+TGG | + | chr8.2:2141361-2141380 | MS.gene61980:CDS | 30.0% | |
| TTGGTATATCAACTCAGATT+TGG | - | chr8.2:2145360-2145379 | None:intergenic | 30.0% | |
| ! | AAGTTAGCTGGTTTATTACA+GGG | + | chr8.2:2143401-2143420 | MS.gene61980:intron | 30.0% |
| ! | AATCTTTTCCTGCAGAATTA+AGG | - | chr8.2:2141698-2141717 | None:intergenic | 30.0% |
| ! | AGATCTGGTTTCATTATCTT+TGG | + | chr8.2:2143772-2143791 | MS.gene61980:intron | 30.0% |
| ! | AGTAATCTTTAGTGTTTTCC+AGG | + | chr8.2:2142576-2142595 | MS.gene61980:intron | 30.0% |
| ! | ATATCATTTTCCCGATCAAT+AGG | - | chr8.2:2142224-2142243 | None:intergenic | 30.0% |
| ! | ATCTTTTCCTGCAGAATTAA+GGG | - | chr8.2:2141697-2141716 | None:intergenic | 30.0% |
| ! | CTTTAGAAATTAGATCTTCG+CGG | - | chr8.2:2145665-2145684 | None:intergenic | 30.0% |
| ! | GTAATGCTTTATTATTGGGA+TGG | + | chr8.2:2143297-2143316 | MS.gene61980:intron | 30.0% |
| ! | GTGATGATCTTGTTATAGTT+GGG | + | chr8.2:2141748-2141767 | MS.gene61980:CDS | 30.0% |
| ! | TGAATAATGGAAGAAAAGTG+AGG | + | chr8.2:2144506-2144525 | MS.gene61980:intron | 30.0% |
| ! | TGATGATCTTGTTATAGTTG+GGG | + | chr8.2:2141749-2141768 | MS.gene61980:CDS | 30.0% |
| ! | TTTATGTTTGGTGGATATGA+TGG | + | chr8.2:2141459-2141478 | MS.gene61980:CDS | 30.0% |
| !! | ATATTTTCATTTTCAGGGTG+TGG | + | chr8.2:2144807-2144826 | MS.gene61980:intron | 30.0% |
| !! | TGTTTGCTGTATTTCATGAA+AGG | + | chr8.2:2142180-2142199 | MS.gene61980:CDS | 30.0% |
| !!! | GATTCTCGGTTTTTTATGTT+TGG | + | chr8.2:2141447-2141466 | MS.gene61980:CDS | 30.0% |
| !!! | TGCTGTTTTTGATTTTTGAC+AGG | - | chr8.2:2141867-2141886 | None:intergenic | 30.0% |
| !!! | TTGTTTTATCCCCTTGTTTT+TGG | + | chr8.2:2144610-2144629 | MS.gene61980:intron | 30.0% |
| AAAACTGATGGGATGTCTAA+AGG | - | chr8.2:2144465-2144484 | None:intergenic | 35.0% | |
| AAATTCGGATGGTTAGACTT+AGG | + | chr8.2:2142098-2142117 | MS.gene61980:CDS | 35.0% | |
| AACACAACATTGTCAAGAGT+TGG | + | chr8.2:2141632-2141651 | MS.gene61980:CDS | 35.0% | |
| AACTTTATCTTCCAGCAGAA+CGG | - | chr8.2:2142336-2142355 | None:intergenic | 35.0% | |
| AATTATCTTGGAGTTCTTGG+TGG | + | chr8.2:2141600-2141619 | MS.gene61980:CDS | 35.0% | |
| AATTCGGATGGTTAGACTTA+GGG | + | chr8.2:2142099-2142118 | MS.gene61980:CDS | 35.0% | |
| ACAAAATGCATGTTCTCATG+GGG | + | chr8.2:2143530-2143549 | MS.gene61980:CDS | 35.0% | |
| ACAATGCATCAGTATACCTT+AGG | - | chr8.2:2144169-2144188 | None:intergenic | 35.0% | |
| AGAAAGAAATAACAGCTGGA+AGG | + | chr8.2:2141535-2141554 | MS.gene61980:CDS | 35.0% | |
| AGCATGTTGAAAGAGTGAAA+TGG | + | chr8.2:2145745-2145764 | MS.gene61980:CDS | 35.0% | |
| AGTATGATGAAACTATGGCA+GGG | - | chr8.2:2142782-2142801 | None:intergenic | 35.0% | |
| ATGAAGGCTAAAATTACCAG+AGG | + | chr8.2:2143197-2143216 | MS.gene61980:intron | 35.0% | |
| ATTCAGGAGATCCTATTGAT+CGG | + | chr8.2:2142210-2142229 | MS.gene61980:CDS | 35.0% | |
| ATTTCAATCAGGCAAGTTAC+TGG | - | chr8.2:2145269-2145288 | None:intergenic | 35.0% | |
| CATCACACTTAGTTGTAACT+TGG | + | chr8.2:2144436-2144455 | MS.gene61980:intron | 35.0% | |
| CATGAAAGGAATCAACATTC+AGG | + | chr8.2:2142194-2142213 | MS.gene61980:CDS | 35.0% | |
| CCATCACTCATTTCTTTCAA+AGG | - | chr8.2:2142386-2142405 | None:intergenic | 35.0% | |
| CCATTATTCATAAATTGGCC+AGG | - | chr8.2:2144496-2144515 | None:intergenic | 35.0% | |
| CCTGGCCAATTTATGAATAA+TGG | + | chr8.2:2144493-2144512 | MS.gene61980:intron | 35.0% | |
| CTACAAAATGCATGTTCTCA+TGG | + | chr8.2:2143528-2143547 | MS.gene61980:CDS | 35.0% | |
| CTTCCTACTGCATATATCAA+TGG | - | chr8.2:2144767-2144786 | None:intergenic | 35.0% | |
| GAAATATGCAAAACAGGGTA+AGG | + | chr8.2:2142064-2142083 | MS.gene61980:CDS | 35.0% | |
| GAATTCTTGAATGAAGTAGC+TGG | - | chr8.2:2142632-2142651 | None:intergenic | 35.0% | |
| GCAAAATACCTGACAAGAAA+AGG | - | chr8.2:2143647-2143666 | None:intergenic | 35.0% | |
| GGTGGAATATTACATGTTCA+TGG | + | chr8.2:2145494-2145513 | MS.gene61980:CDS | 35.0% | |
| GGTTATAGTAGATCTGTTTG+CGG | + | chr8.2:2143601-2143620 | MS.gene61980:CDS | 35.0% | |
| GTTATAGTAGATCTGTTTGC+GGG | + | chr8.2:2143602-2143621 | MS.gene61980:CDS | 35.0% | |
| GTTCATGGAATCAATATTGC+AGG | + | chr8.2:2145465-2145484 | MS.gene61980:intron | 35.0% | |
| GTTGTATGAAATCCCTTTAG+TGG | + | chr8.2:2142543-2142562 | MS.gene61980:intron | 35.0% | |
| TAAAAATCCAGTCCTTAGCA+AGG | + | chr8.2:2144231-2144250 | MS.gene61980:intron | 35.0% | |
| TAATCGAAATACAGCTCCTA+AGG | + | chr8.2:2144150-2144169 | MS.gene61980:CDS | 35.0% | |
| TACCCATTGATATATGCAGT+AGG | + | chr8.2:2144761-2144780 | MS.gene61980:intron | 35.0% | |
| TAGTATGATGAAACTATGGC+AGG | - | chr8.2:2142783-2142802 | None:intergenic | 35.0% | |
| TATTATTGGGATGGAGCTTT+GGG | + | chr8.2:2143306-2143325 | MS.gene61980:intron | 35.0% | |
| TATTTGGCAGATGTTCAAGT+TGG | - | chr8.2:2141947-2141966 | None:intergenic | 35.0% | |
| TCACACACTGTTATTCTTTC+AGG | + | chr8.2:2145699-2145718 | MS.gene61980:intron | 35.0% | |
| TCCAAGAAACAAGTGTGATA+AGG | - | chr8.2:2144396-2144415 | None:intergenic | 35.0% | |
| TCTTGACAATGTTGTGTTAC+TGG | - | chr8.2:2141630-2141649 | None:intergenic | 35.0% | |
| TGGAAAGAAATTCCAGTTTC+CGG | + | chr8.2:2141381-2141400 | MS.gene61980:CDS | 35.0% | |
| TGGAAGAAAGAAATAACAGC+TGG | + | chr8.2:2141531-2141550 | MS.gene61980:CDS | 35.0% | |
| TGGAGTAACATCTTTGATTG+AGG | + | chr8.2:2142403-2142422 | MS.gene61980:CDS | 35.0% | |
| TGTTTGCTTCCTTTCAATTG+TGG | + | chr8.2:2144202-2144221 | MS.gene61980:intron | 35.0% | |
| TTATTATTGGGATGGAGCTT+TGG | + | chr8.2:2143305-2143324 | MS.gene61980:intron | 35.0% | |
| TTTCTGCATGATCTTAAGCA+GGG | + | chr8.2:2144015-2144034 | MS.gene61980:intron | 35.0% | |
| ! | AATCTTTAGTGTTTTCCAGG+TGG | + | chr8.2:2142579-2142598 | MS.gene61980:intron | 35.0% |
| ! | AGGCATATACAAGTTTTGCA+TGG | - | chr8.2:2144042-2144061 | None:intergenic | 35.0% |
| ! | AGTGTATTCCATTTTCTCGA+TGG | - | chr8.2:2143496-2143515 | None:intergenic | 35.0% |
| ! | ATCTTTAGTGTTTTCCAGGT+GGG | + | chr8.2:2142580-2142599 | MS.gene61980:intron | 35.0% |
| ! | ATTTGGCAGATGTTCAAGTT+GGG | - | chr8.2:2141946-2141965 | None:intergenic | 35.0% |
| ! | CAAGTTAGCTGGTTTATTAC+AGG | + | chr8.2:2143400-2143419 | MS.gene61980:intron | 35.0% |
| ! | CCTTTGAAAGAAATGAGTGA+TGG | + | chr8.2:2142383-2142402 | MS.gene61980:CDS | 35.0% |
| ! | GACACTGATTACTCATATGT+TGG | - | chr8.2:2143167-2143186 | None:intergenic | 35.0% |
| ! | GACTCGCAAACTTTTTACTT+TGG | + | chr8.2:2144664-2144683 | MS.gene61980:intron | 35.0% |
| ! | GACTGTTTTACTTCTGATGA+TGG | + | chr8.2:2145322-2145341 | MS.gene61980:intron | 35.0% |
| ! | GATGATCTTGTTATAGTTGG+GGG | + | chr8.2:2141750-2141769 | MS.gene61980:CDS | 35.0% |
| ! | GGCATATACAAGTTTTGCAT+GGG | - | chr8.2:2144041-2144060 | None:intergenic | 35.0% |
| ! | GGTGATGATCTTGTTATAGT+TGG | + | chr8.2:2141747-2141766 | MS.gene61980:CDS | 35.0% |
| ! | TGAGGTATAAAAGTGTGCAA+AGG | + | chr8.2:2144524-2144543 | MS.gene61980:intron | 35.0% |
| ! | TGGAGTACATATCTGTTTTC+CGG | + | chr8.2:2142145-2142164 | MS.gene61980:CDS | 35.0% |
| ! | TTATCACACTTGTTTCTTGG+AGG | + | chr8.2:2144395-2144414 | MS.gene61980:intron | 35.0% |
| !! | GATAACTTGCTTCACATCAA+TGG | + | chr8.2:2141996-2142015 | MS.gene61980:CDS | 35.0% |
| !! | TTCAGGTTTTCTTGCTTTTG+AGG | + | chr8.2:2143938-2143957 | MS.gene61980:intron | 35.0% |
| !!! | GCATTTTTAAACTGGCTTGT+TGG | + | chr8.2:2145176-2145195 | MS.gene61980:intron | 35.0% |
| !!! | TCTCGGTTTTTTATGTTTGG+TGG | + | chr8.2:2141450-2141469 | MS.gene61980:CDS | 35.0% |
| !!! | TGATTTTGAAGTATTGTGGG+AGG | + | chr8.2:2144291-2144310 | MS.gene61980:intron | 35.0% |
| AAAAATTGAGTGGGAGAACC+TGG | - | chr8.2:2141571-2141590 | None:intergenic | 40.0% | |
| AAACTAGGAATGATGTCCAG+TGG | + | chr8.2:2143245-2143264 | MS.gene61980:intron | 40.0% | |
| AACTTGTATATGCCTGTGAG+TGG | + | chr8.2:2144047-2144066 | MS.gene61980:CDS | 40.0% | |
| AAGATCATCACCGACAACAT+TGG | - | chr8.2:2141739-2141758 | None:intergenic | 40.0% | |
| AAGTATCCAGCTTGTGTAAG+TGG | - | chr8.2:2142260-2142279 | None:intergenic | 40.0% | |
| AATTTCTCCTTGCTAAGGAC+TGG | - | chr8.2:2144241-2144260 | None:intergenic | 40.0% | |
| ACATGTTCATGGGAATGCAA+AGG | + | chr8.2:2145505-2145524 | MS.gene61980:CDS | 40.0% | |
| ACCTAAATGGAGGGATGAAA+GGG | + | chr8.2:2141895-2141914 | MS.gene61980:CDS | 40.0% | |
| ACGATGAGCCTTAAGTGATT+TGG | - | chr8.2:2142696-2142715 | None:intergenic | 40.0% | |
| AGTGTCTAGACGAACTATGA+AGG | + | chr8.2:2143181-2143200 | MS.gene61980:intron | 40.0% | |
| ATACAGCAAACAGCTCTTGA+TGG | - | chr8.2:2142172-2142191 | None:intergenic | 40.0% | |
| ATATTCGTGGAGAAGAGTCA+GGG | - | chr8.2:2142309-2142328 | None:intergenic | 40.0% | |
| ATTCACTGCAAAGCTATTGC+AGG | - | chr8.2:2143361-2143380 | None:intergenic | 40.0% | |
| CAATATTGCAGGAAAGAAGG+TGG | + | chr8.2:2145476-2145495 | MS.gene61980:intron | 40.0% | |
| CAATGGTAGCATCTGATTCT+CGG | + | chr8.2:2141433-2141452 | MS.gene61980:CDS | 40.0% | |
| CATGTTACCCTTAATTCTGC+AGG | + | chr8.2:2141687-2141706 | MS.gene61980:CDS | 40.0% | |
| GAAAGAAATTCCAGTTTCCG+GGG | + | chr8.2:2141383-2141402 | MS.gene61980:CDS | 40.0% | |
| GAGATTCTTGTTGGAGATGA+TGG | + | chr8.2:2143461-2143480 | MS.gene61980:CDS | 40.0% | |
| GGAAAGAAATTCCAGTTTCC+GGG | + | chr8.2:2141382-2141401 | MS.gene61980:CDS | 40.0% | |
| GTATTGCCGAGACAAGATTA+TGG | + | chr8.2:2143735-2143754 | MS.gene61980:intron | 40.0% | |
| GTGAATGCATTAAATGGAGC+AGG | - | chr8.2:2141830-2141849 | None:intergenic | 40.0% | |
| GTGCAAAGGAATTTGAGTGA+GGG | + | chr8.2:2144538-2144557 | MS.gene61980:intron | 40.0% | |
| GTTTCTGCATGATCTTAAGC+AGG | + | chr8.2:2144014-2144033 | MS.gene61980:intron | 40.0% | |
| TCCTTCCAAAAATCAACCAC+TGG | - | chr8.2:2143264-2143283 | None:intergenic | 40.0% | |
| TCTTTCAGGATATTGTTGGG+AGG | + | chr8.2:2145713-2145732 | MS.gene61980:intron | 40.0% | |
| TGATTCCATGAACACGAATG+AGG | - | chr8.2:2145458-2145477 | None:intergenic | 40.0% | |
| TGGGTTAACCATCGAGAAAA+TGG | + | chr8.2:2143485-2143504 | MS.gene61980:CDS | 40.0% | |
| TGTGCAAAGGAATTTGAGTG+AGG | + | chr8.2:2144537-2144556 | MS.gene61980:intron | 40.0% | |
| TTCAGGAGATCCTATTGATC+GGG | + | chr8.2:2142211-2142230 | MS.gene61980:CDS | 40.0% | |
| TTCTACAGGAATTGCCAACA+AGG | + | chr8.2:2142447-2142466 | MS.gene61980:CDS | 40.0% | |
| TTTGCCTGTTTGAACATGCA+GGG | + | chr8.2:2143662-2143681 | MS.gene61980:intron | 40.0% | |
| ! | AGGAAAGCATACTCTGAAGA+GGG | + | chr8.2:2142122-2142141 | MS.gene61980:CDS | 40.0% |
| ! | ATGTTTGGTGGATATGATGG+TGG | + | chr8.2:2141462-2141481 | MS.gene61980:CDS | 40.0% |
| ! | ATTATGTCGGAGTGCTTCTA+TGG | - | chr8.2:2144083-2144102 | None:intergenic | 40.0% |
| ! | GCCTTATCACACTTGTTTCT+TGG | + | chr8.2:2144392-2144411 | MS.gene61980:intron | 40.0% |
| ! | GTAATCTTTCTGAGAAGCTC+CGG | + | chr8.2:2143552-2143571 | MS.gene61980:CDS | 40.0% |
| ! | GTGTAAGTGGTTTGGAAAGT+GGG | - | chr8.2:2142247-2142266 | None:intergenic | 40.0% |
| ! | TCTTGTTGGAGATGATGGTT+GGG | + | chr8.2:2143466-2143485 | MS.gene61980:CDS | 40.0% |
| ! | TGTGTAAGTGGTTTGGAAAG+TGG | - | chr8.2:2142248-2142267 | None:intergenic | 40.0% |
| ! | TGTTTGGTGGATATGATGGT+GGG | + | chr8.2:2141463-2141482 | MS.gene61980:CDS | 40.0% |
| ! | TTCTTGTTGGAGATGATGGT+TGG | + | chr8.2:2143465-2143484 | MS.gene61980:CDS | 40.0% |
| ! | TTTTGCCTGTTTGAACATGC+AGG | + | chr8.2:2143661-2143680 | MS.gene61980:intron | 40.0% |
| !! | ACTTTTTCCATTGTCCCATC+TGG | - | chr8.2:2145392-2145411 | None:intergenic | 40.0% |
| !! | CAACATTTGGTGACGAGAAT+GGG | + | chr8.2:2143855-2143874 | MS.gene61980:intron | 40.0% |
| !! | GAAGTATTGTGGGAGGAAAA+TGG | + | chr8.2:2144298-2144317 | MS.gene61980:intron | 40.0% |
| !! | GATGTCCAGTGGTTGATTTT+TGG | + | chr8.2:2143256-2143275 | MS.gene61980:intron | 40.0% |
| !! | TCAACATTTGGTGACGAGAA+TGG | + | chr8.2:2143854-2143873 | MS.gene61980:intron | 40.0% |
| !! | TCCAGTGGTTGATTTTTGGA+AGG | + | chr8.2:2143260-2143279 | MS.gene61980:intron | 40.0% |
| !! | TTTGGCAGATGTTCAAGTTG+GGG | - | chr8.2:2141945-2141964 | None:intergenic | 40.0% |
| !!! | TTTTGCTGGCTCACTGAATT+TGG | - | chr8.2:2141802-2141821 | None:intergenic | 40.0% |
| AATTCCTGTAGAAGCCCAGT+CGG | - | chr8.2:2142440-2142459 | None:intergenic | 45.0% | |
| ACCAAGCATGTGTTCCAGAT+GGG | + | chr8.2:2145375-2145394 | MS.gene61980:intron | 45.0% | |
| ACTCTATTGCAGAAGAGCTG+TGG | + | chr8.2:2142660-2142679 | MS.gene61980:CDS | 45.0% | |
| AGCACGCCATAATCTTGTCT+CGG | - | chr8.2:2143744-2143763 | None:intergenic | 45.0% | |
| AGTTGCAGAACACAGTGCAA+TGG | - | chr8.2:2142038-2142057 | None:intergenic | 45.0% | |
| ATCTCACATCTGCAACAACG+TGG | - | chr8.2:2145788-2145807 | None:intergenic | 45.0% | |
| ATGTGTTCCAGATGGGACAA+TGG | + | chr8.2:2145382-2145401 | MS.gene61980:intron | 45.0% | |
| CAGTCCAAGAACCGACTAAT+CGG | + | chr8.2:2142871-2142890 | MS.gene61980:intron | 45.0% | |
| CATATTCGTGGAGAAGAGTC+AGG | - | chr8.2:2142310-2142329 | None:intergenic | 45.0% | |
| CGTAGTACAGCCAATGTTGT+CGG | + | chr8.2:2141726-2141745 | MS.gene61980:CDS | 45.0% | |
| CTCGTCTTTGCAATCCATCT+GGG | - | chr8.2:2143582-2143601 | None:intergenic | 45.0% | |
| CTGACTCTTCTCCACGAATA+TGG | + | chr8.2:2142308-2142327 | MS.gene61980:CDS | 45.0% | |
| CTGAGTCACCAATTGAGAGT+CGG | + | chr8.2:2144321-2144340 | MS.gene61980:intron | 45.0% | |
| CTTGTACCAGTTGCAGCAAT+CGG | - | chr8.2:2143428-2143447 | None:intergenic | 45.0% | |
| GACCTAAATGGAGGGATGAA+AGG | + | chr8.2:2141894-2141913 | MS.gene61980:CDS | 45.0% | |
| GGTGCATCATGCTATGCATT+TGG | + | chr8.2:2141774-2141793 | MS.gene61980:CDS | 45.0% | |
| TACCAAGCATGTGTTCCAGA+TGG | + | chr8.2:2145374-2145393 | MS.gene61980:intron | 45.0% | |
| TCCAAACCACTTACACAAGC+TGG | + | chr8.2:2142251-2142270 | MS.gene61980:CDS | 45.0% | |
| TCCAGCTTGTGTAAGTGGTT+TGG | - | chr8.2:2142255-2142274 | None:intergenic | 45.0% | |
| TCCATCTAGTGAATGCAGCT+GGG | + | chr8.2:2144855-2144874 | MS.gene61980:CDS | 45.0% | |
| TCCCTTTCATCCCTCCATTT+AGG | - | chr8.2:2141899-2141918 | None:intergenic | 45.0% | |
| TGGAGGGATGAAAGGGAATA+CGG | + | chr8.2:2141902-2141921 | MS.gene61980:CDS | 45.0% | |
| TGGGAATGCAAAGGATTCAG+AGG | + | chr8.2:2145514-2145533 | MS.gene61980:CDS | 45.0% | |
| TGTCGATCATCAGGGATACT+TGG | - | chr8.2:2145113-2145132 | None:intergenic | 45.0% | |
| TTACCTTAAAGCCCTCACAG+CGG | - | chr8.2:2144884-2144903 | None:intergenic | 45.0% | |
| TTCCATCTAGTGAATGCAGC+TGG | + | chr8.2:2144854-2144873 | MS.gene61980:CDS | 45.0% | |
| TTGATGTTCAGACGAGTCAG+TGG | + | chr8.2:2141511-2141530 | MS.gene61980:CDS | 45.0% | |
| TTGTACCAGTTGCAGCAATC+GGG | - | chr8.2:2143427-2143446 | None:intergenic | 45.0% | |
| TTTCGCCTCATTCGTGTTCA+TGG | + | chr8.2:2145450-2145469 | MS.gene61980:intron | 45.0% | |
| ! | AAAGCATACTCTGAAGAGGG+TGG | + | chr8.2:2142125-2142144 | MS.gene61980:CDS | 45.0% |
| ! | CAGTGAAACCGACTCTCAAT+TGG | - | chr8.2:2144332-2144351 | None:intergenic | 45.0% |
| ! | GAGCGTTGTATCGTGATTGA+AGG | + | chr8.2:2144124-2144143 | MS.gene61980:CDS | 45.0% |
| ! | GAGGAAAGCATACTCTGAAG+AGG | + | chr8.2:2142121-2142140 | MS.gene61980:CDS | 45.0% |
| ! | GATCTTGTTATAGTTGGGGG+TGG | + | chr8.2:2141753-2141772 | MS.gene61980:CDS | 45.0% |
| ! | TAGTGTTTTCCAGGTGGGAT+CGG | + | chr8.2:2142585-2142604 | MS.gene61980:intron | 45.0% |
| ! | TTGTGCTGCCTTTTCTTGTC+AGG | + | chr8.2:2143636-2143655 | MS.gene61980:CDS | 45.0% |
| !! | ATGATGGTGGGAAAGCACTT+GGG | + | chr8.2:2141475-2141494 | MS.gene61980:CDS | 45.0% |
| !! | TATGATGGTGGGAAAGCACT+TGG | + | chr8.2:2141474-2141493 | MS.gene61980:CDS | 45.0% |
| !! | TAAGAAAAAAATAAAAAAAT+CGG | - | chr8.2:2142930-2142949 | None:intergenic | 5.0% |
| !! | TTAAAATAGTATAATATAAT+TGG | - | chr8.2:2143707-2143726 | None:intergenic | 5.0% |
| AAATTCCAGTTTCCGGGGAC+TGG | + | chr8.2:2141388-2141407 | MS.gene61980:CDS | 50.0% | |
| ACCCAGCTGCATTCACTAGA+TGG | - | chr8.2:2144859-2144878 | None:intergenic | 50.0% | |
| ATTGGTCCCCTCCGATTAGT+CGG | - | chr8.2:2142885-2142904 | None:intergenic | 50.0% | |
| CAAGAACCGACTAATCGGAG+GGG | + | chr8.2:2142876-2142895 | MS.gene61980:intron | 50.0% | |
| CAAGATTATGGCGTGCTGTG+TGG | + | chr8.2:2143747-2143766 | MS.gene61980:intron | 50.0% | |
| CACACCCTGCATGTTCAAAC+AGG | - | chr8.2:2143669-2143688 | None:intergenic | 50.0% | |
| CCAAGAACCGACTAATCGGA+GGG | + | chr8.2:2142875-2142894 | MS.gene61980:intron | 50.0% | |
| CCTCGTCTTTGCAATCCATC+TGG | - | chr8.2:2143583-2143602 | None:intergenic | 50.0% | |
| GCATGAGAGTGACGTGCATA+TGG | - | chr8.2:2141414-2141433 | None:intergenic | 50.0% | |
| GTAGATCTGTTTGCGGGCAT+TGG | + | chr8.2:2143608-2143627 | MS.gene61980:CDS | 50.0% | |
| GTGGCTGATAGAGTCTGTCT+TGG | + | chr8.2:2144826-2144845 | MS.gene61980:CDS | 50.0% | |
| TCCAAGAACCGACTAATCGG+AGG | + | chr8.2:2142874-2142893 | MS.gene61980:intron | 50.0% | |
| TCGGATGGTTAGACTTAGGG+AGG | + | chr8.2:2142102-2142121 | MS.gene61980:CDS | 50.0% | |
| TGCACGTCACTCTCATGCAA+TGG | + | chr8.2:2141416-2141435 | MS.gene61980:CDS | 50.0% | |
| ! | AGGAAAAAGGCCTACCGACT+GGG | + | chr8.2:2142423-2142442 | MS.gene61980:CDS | 50.0% |
| ! | CGATTAGTCGGTTCTTGGAC+TGG | - | chr8.2:2142873-2142892 | None:intergenic | 50.0% |
| ! | GCAAACAGCTCTTGATGGAC+CGG | - | chr8.2:2142167-2142186 | None:intergenic | 50.0% |
| ! | TCCCATCTGGAACACATGCT+TGG | - | chr8.2:2145379-2145398 | None:intergenic | 50.0% |
| ! | TCGGAGTGCTTCTATGGCAT+GGG | - | chr8.2:2144077-2144096 | None:intergenic | 50.0% |
| ! | TCTTTCTGAGAAGCTCCGGA+TGG | + | chr8.2:2143556-2143575 | MS.gene61980:CDS | 50.0% |
| ! | TTTTCCAGGTGGGATCGGAT+TGG | + | chr8.2:2142590-2142609 | MS.gene61980:intron | 50.0% |
| !! | AGGATTCAGAGGAGTGTCAG+TGG | + | chr8.2:2145525-2145544 | MS.gene61980:CDS | 50.0% |
| !! | CCAGATGGATTGCAAAGACG+AGG | + | chr8.2:2143580-2143599 | MS.gene61980:CDS | 50.0% |
| !! | TGATGGTGGGAAAGCACTTG+GGG | + | chr8.2:2141476-2141495 | MS.gene61980:CDS | 50.0% |
| AAGAGTCAGGGCTTCAGAGC+AGG | - | chr8.2:2142297-2142316 | None:intergenic | 55.0% | |
| ATCACCAATCCGATCCCACC+TGG | - | chr8.2:2142597-2142616 | None:intergenic | 55.0% | |
| CTGGAAGGAATCCACATGCC+AGG | + | chr8.2:2141550-2141569 | MS.gene61980:CDS | 55.0% | |
| GAGGAAAAAGGCCTACCGAC+TGG | + | chr8.2:2142422-2142441 | MS.gene61980:CDS | 55.0% | |
| GCAACAACGTGGCGAATGTG+TGG | - | chr8.2:2145777-2145796 | None:intergenic | 55.0% | |
| GCAGAACGGCACCATATTCG+TGG | - | chr8.2:2142322-2142341 | None:intergenic | 55.0% | |
| GCGTGCTGTGTGGAAAGATC+TGG | + | chr8.2:2143757-2143776 | MS.gene61980:intron | 55.0% | |
| TCACCGCTGTGAGGGCTTTA+AGG | + | chr8.2:2144878-2144897 | MS.gene61980:CDS | 55.0% | |
| TGCAATCCATCTGGGCCATC+CGG | - | chr8.2:2143574-2143593 | None:intergenic | 55.0% | |
| TTCGCGGTTGCAGTGAGACT+GGG | - | chr8.2:2145649-2145668 | None:intergenic | 55.0% | |
| ! | CCCTCCGATTAGTCGGTTCT+TGG | - | chr8.2:2142878-2142897 | None:intergenic | 55.0% |
| ! | CGGAGTGCTTCTATGGCATG+GGG | - | chr8.2:2144076-2144095 | None:intergenic | 55.0% |
| ! | GTCGGAGTGCTTCTATGGCA+TGG | - | chr8.2:2144078-2144097 | None:intergenic | 55.0% |
| !! | CGAATATGGTGCCGTTCTGC+TGG | + | chr8.2:2142322-2142341 | MS.gene61980:CDS | 55.0% |
| !! | TGGAGCAGGCTGACTTTTGC+TGG | - | chr8.2:2141816-2141835 | None:intergenic | 55.0% |
| AATCCCACCGCTCACTTGCG+GGG | + | chr8.2:2142902-2142921 | MS.gene61980:intron | 60.0% | |
| ACGTGCATATGGCCAGTCCC+CGG | - | chr8.2:2141403-2141422 | None:intergenic | 60.0% | |
| CAATCCCACCGCTCACTTGC+GGG | + | chr8.2:2142901-2142920 | MS.gene61980:intron | 60.0% | |
| CCAATCCCACCGCTCACTTG+CGG | + | chr8.2:2142900-2142919 | MS.gene61980:intron | 60.0% | |
| CCTGTAGAAGCCCAGTCGGT+AGG | - | chr8.2:2142436-2142455 | None:intergenic | 60.0% | |
| CTTCGCGGTTGCAGTGAGAC+TGG | - | chr8.2:2145650-2145669 | None:intergenic | 60.0% | |
| GAGTGGGAGAACCTGGCATG+TGG | - | chr8.2:2141564-2141583 | None:intergenic | 60.0% | |
| GGCATGGGGATTCCACTCAC+AGG | - | chr8.2:2144062-2144081 | None:intergenic | 60.0% | |
| TATGGCCAGTCCCCGGAAAC+TGG | - | chr8.2:2141396-2141415 | None:intergenic | 60.0% | |
| ! | CCTACCGACTGGGCTTCTAC+AGG | + | chr8.2:2142433-2142452 | MS.gene61980:CDS | 60.0% |
| ATCCCACCGCTCACTTGCGG+GGG | + | chr8.2:2142903-2142922 | MS.gene61980:intron | 65.0% | |
| CAGCTGGGTCACCGCTGTGA+GGG | + | chr8.2:2144870-2144889 | MS.gene61980:CDS | 65.0% | |
| CAGGGCCCGATTGCTGCAAC+TGG | + | chr8.2:2143419-2143438 | MS.gene61980:intron | 65.0% | |
| CCGCAAGTGAGCGGTGGGAT+TGG | - | chr8.2:2142903-2142922 | None:intergenic | 65.0% | |
| GAAGCTCCGGATGGCCCAGA+TGG | + | chr8.2:2143565-2143584 | MS.gene61980:CDS | 65.0% | |
| ATCGGGCCCCCGCAAGTGAG+CGG | - | chr8.2:2142912-2142931 | None:intergenic | 70.0% | |
| GCAGCTGGGTCACCGCTGTG+AGG | + | chr8.2:2144869-2144888 | MS.gene61980:CDS | 70.0% | |
| GGCCCCCGCAAGTGAGCGGT+GGG | - | chr8.2:2142908-2142927 | None:intergenic | 75.0% | |
| ! | GGGCCCCCGCAAGTGAGCGG+TGG | - | chr8.2:2142909-2142928 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 2141294 | 2145827 | 2141294 | ID=MS.gene61980 |
| chr8.2 | mRNA | 2141294 | 2145827 | 2141294 | ID=MS.gene61980.t1;Parent=MS.gene61980 |
| chr8.2 | exon | 2141294 | 2142468 | 2141294 | ID=MS.gene61980.t1.exon1;Parent=MS.gene61980.t1 |
| chr8.2 | CDS | 2141294 | 2142468 | 2141294 | ID=cds.MS.gene61980.t1;Parent=MS.gene61980.t1 |
| chr8.2 | exon | 2142598 | 2142727 | 2142598 | ID=MS.gene61980.t1.exon2;Parent=MS.gene61980.t1 |
| chr8.2 | CDS | 2142598 | 2142727 | 2142598 | ID=cds.MS.gene61980.t1;Parent=MS.gene61980.t1 |
| chr8.2 | exon | 2143422 | 2143657 | 2143422 | ID=MS.gene61980.t1.exon3;Parent=MS.gene61980.t1 |
| chr8.2 | CDS | 2143422 | 2143657 | 2143422 | ID=cds.MS.gene61980.t1;Parent=MS.gene61980.t1 |
| chr8.2 | exon | 2144036 | 2144171 | 2144036 | ID=MS.gene61980.t1.exon4;Parent=MS.gene61980.t1 |
| chr8.2 | CDS | 2144036 | 2144171 | 2144036 | ID=cds.MS.gene61980.t1;Parent=MS.gene61980.t1 |
| chr8.2 | exon | 2144823 | 2144899 | 2144823 | ID=MS.gene61980.t1.exon5;Parent=MS.gene61980.t1 |
| chr8.2 | CDS | 2144823 | 2144899 | 2144823 | ID=cds.MS.gene61980.t1;Parent=MS.gene61980.t1 |
| chr8.2 | exon | 2145487 | 2145593 | 2145487 | ID=MS.gene61980.t1.exon6;Parent=MS.gene61980.t1 |
| chr8.2 | CDS | 2145487 | 2145593 | 2145487 | ID=cds.MS.gene61980.t1;Parent=MS.gene61980.t1 |
| chr8.2 | exon | 2145721 | 2145827 | 2145721 | ID=MS.gene61980.t1.exon7;Parent=MS.gene61980.t1 |
| chr8.2 | CDS | 2145721 | 2145827 | 2145721 | ID=cds.MS.gene61980.t1;Parent=MS.gene61980.t1 |
| Gene Sequence |
| Protein sequence |
